BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008097
(577 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 629
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/517 (68%), Positives = 418/517 (80%), Gaps = 19/517 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MPH+I SPPDE IF+TVIRGLGRARMI V+K DL+S+F PSLKIFNSILDVLVK D
Sbjct: 98 MPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLISKFGKNPSLKIFNSILDVLVKVD 157
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID+AR FYRK+MM SGVQGDDYT+AILMKGLCLTNR+GDGF+LL VMKSRGVKPN+V+YN
Sbjct: 158 IDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMKSRGVKPNAVVYN 217
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LCKNGKVGRARSLM ++EEPNDVTF++LI AYCKEENLV ALVLLEKSFS GFVP
Sbjct: 218 TLLHALCKNGKVGRARSLMDEIEEPNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVP 277
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT+TKV+E+LC+ GRV +AVE+LE +G RLGK+K RFL
Sbjct: 278 DVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFL 337
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
KEMERKGCLPNV+TYNILIS +C++G+ D ALD+FNDMK DGISWNF TYDTLI+GL G
Sbjct: 338 KEMERKGCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLIKGLFFG 397
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GRI++GLKIL+LME+SK GS GRISPYNSVLYGLY++N DEALE+L +MEKLFPRAVDR
Sbjct: 398 GRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKKNMWDEALEFLMKMEKLFPRAVDR 457
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL+ILGFC G V++AK FDQMI EGG PN+++YDCL+H +CQE +REA ELM EM G
Sbjct: 458 SLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYDCLVHGFCQEGNLREAFELMNEMVG 517
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
HGY +AS FN ++ G C QG +ALKL+ +DM +GRG +P G YSPLI ALC KG
Sbjct: 518 HGYFLVASGFNALIHGFCGQGKDESALKLL-DDM--VGRGCVPDRGTYSPLIDALCRKGN 574
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
FQ A + QM+ KGI PD TWNSLLI LS++ WL
Sbjct: 575 FQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEIIWL 611
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 43/255 (16%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMED--------------------------------- 299
TY LI+ LC+ R D ++L M
Sbjct: 74 TYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDL 133
Query: 300 -SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
SK G + +NS+L L + + Y KQM + D + IL G C+
Sbjct: 134 ISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTNR 193
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ D R M G PN V+Y+ L+HA C+ +V A LM E+ P TFN
Sbjct: 194 IGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----PNDVTFNV 249
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++ C++ N+ AL L+E + G +P + +++ LC G A +L ++
Sbjct: 250 LIAAYCKEENLVQALVLLE---KSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVE 306
Query: 477 GKGILPDYLTWNSLL 491
KG L D + +N+LL
Sbjct: 307 YKGGLVDVVAYNTLL 321
>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/517 (67%), Positives = 418/517 (80%), Gaps = 19/517 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP SI SPPDESIF+T++RGLGRARM+ ++K DL+++F PSLKIFNSILDVLVKED
Sbjct: 153 MPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKED 212
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDLAR FYRKKMM +GV GDDYT+ ILMKGLCLTNR+GD FKLL VMKSRG PN+VIYN
Sbjct: 213 IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYN 272
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
T+IH+LCKNGKVGRARSLM++M EP+DVTF++LI AYC+EENLV ALVLLEKSFS GFVP
Sbjct: 273 TMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVP 332
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT TKV+ +LC GRV + VE+LE G LGK K G R L
Sbjct: 333 DVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVL 392
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K+ME KGCLPNVDTYNIL S YC++G+LDSA+D+FNDMK DGI+WNF+TYDTLIRGLCSG
Sbjct: 393 KDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSG 452
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR++DG KIL+LME+S+ G+ GRISPYNS++YGLY++NQ +EALE+L +MEKLFPRAVDR
Sbjct: 453 GRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDR 512
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL+ILGFC +G++ DAKR +DQMI+EGGVP+V++Y CLIH +CQ+ VREA EL+ EM
Sbjct: 513 SLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVD 572
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
HGY P A TFN ++S C QG VG+ALKL+ EDM +GRG LP G YSP++ ALC KG
Sbjct: 573 HGYFPTAPTFNALISAFCGQGKVGSALKLM-EDM--VGRGCLPDMGSYSPMVDALCNKGD 629
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
FQ A L +QMV K ILPDY TWNS+L+CL+Q+T WL
Sbjct: 630 FQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWL 666
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 185/450 (41%), Gaps = 57/450 (12%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVL 169
N Y LIH LC + + ++ +M P++ F ++ + + + +
Sbjct: 126 NQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKV 185
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
L+ FG P + +L++L V + +++ E + K+M
Sbjct: 186 LDLITKFGENPSLKIFNSILDVL-----VKEDIDLAREF--------------YRKKMMM 226
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G + T+ IL+ C T + A + MK G + N V Y+T+I LC G++
Sbjct: 227 NGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGR 286
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL-KQMEKLFPRAVDRSLKI 348
++ M + + + +N ++ +E +AL L K F V + K+
Sbjct: 287 ARSLMNEMVEPSDVT------FNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKV 340
Query: 349 LG-FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+G C G V + +++ GGV +VV Y+ LI +C + + ++K+M G
Sbjct: 341 VGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGC 400
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMR--GIGRGSLPGSGHYSPLIKALCEKGGF 465
LP T+N + SG C G + +A+ L DM+ GI + Y LI+ LC G
Sbjct: 401 LPNVDTYNILASGYCDSGMLDSAIDLF-NDMKTDGINWNFMT----YDTLIRGLCSGGRM 455
Query: 466 QSASMLLVQM------VGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHEL 519
+ +L M G I P +NS++ L ++ + E + F+ + +L
Sbjct: 456 EDGFKILELMEESRGGAGGRISP----YNSIIYGLYKKNQF------EEALEFLTKMEKL 505
Query: 520 SAKEKRCKLRSLNHLAHGAGSVWLGLRIHD 549
+ LR L GS+ R++D
Sbjct: 506 FPRAVDRSLRILGFCNE--GSIGDAKRVYD 533
>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/517 (67%), Positives = 418/517 (80%), Gaps = 19/517 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP SI SPPDESIF+T++RGLGRARM+ ++K DL+++F PSLKIFNSILDVLVKED
Sbjct: 1 MPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVKED 60
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDLAR FYRKKMM +GV GDDYT+ ILMKGLCLTNR+GD FKLL VMKSRG PN+VIYN
Sbjct: 61 IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYN 120
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
T+IH+LCKNGKVGRARSLM++M EP+DVTF++LI AYC+EENLV ALVLLEKSFS GFVP
Sbjct: 121 TMIHALCKNGKVGRARSLMNEMVEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVP 180
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT TKV+ +LC GRV + VE+LE G LGK K G R L
Sbjct: 181 DVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVL 240
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K+ME KGCLPNVDTYNIL S YC++G+LDSA+D+FNDMK DGI+WNF+TYDTLIRGLCSG
Sbjct: 241 KDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSG 300
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR++DG KIL+LME+S+ G+ GRISPYNS++YGLY++NQ +EALE+L +MEKLFPRAVDR
Sbjct: 301 GRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDR 360
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL+ILGFC +G++ DAKR +DQMI+EGGVP+V++Y CLIH +CQ+ VREA EL+ EM
Sbjct: 361 SLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYVCLIHGFCQDGNVREAFELINEMVD 420
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
HGY P A TFN ++S C QG VG+ALKL+ EDM +GRG LP G YSP++ ALC KG
Sbjct: 421 HGYFPTAPTFNALISAFCGQGKVGSALKLM-EDM--VGRGCLPDMGSYSPMVDALCNKGD 477
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
FQ A L +QMV K ILPDY TWNS+L+CL+Q+T WL
Sbjct: 478 FQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQETVWL 514
>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/514 (67%), Positives = 413/514 (80%), Gaps = 19/514 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP SI PPDESIF+T+IRGLGRARMI DV+K DLV+R+ PSLKIFNSILDVLVKED
Sbjct: 74 MPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKED 133
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDLAR FYRKKMM +G+QGDDYTY ILMKGLCLTNR+G+GFKLL V+KSRG+KPN VIYN
Sbjct: 134 IDLARKFYRKKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYN 193
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LC NGKVGRARSLM++++EPNDVTF++LIC YCKE+N V ALVLLEKSFS GFVP
Sbjct: 194 TLLHALCNNGKVGRARSLMNEIKEPNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVP 253
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT+TKV+E+LC+VGRV +AVEILE +G + GKVK G L
Sbjct: 254 DVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLL 313
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
KEMERKGCLPN DTYN LIS +CE+G+L+SALD+FNDMK DGI+ NFVT+DTLI+GL S
Sbjct: 314 KEMERKGCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSR 373
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR +DG KIL+LME+++ G ISPYNSVLYGLYR+N +EALE+L +ME LFPRAVDR
Sbjct: 374 GRTEDGFKILELMEETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDR 433
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL+ILGFC +G +++AKR +DQM EGG+P+ ++YDCLIH +CQE VREA ELM EM
Sbjct: 434 SLRILGFCEEGAIQEAKRVYDQMNNEGGIPSALVYDCLIHGFCQEGCVREALELMNEMVF 493
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
GY P+ASTFN ++SG CR G G+ALKL+ EDM +GRG +P +G YSPLI ALC K
Sbjct: 494 LGYFPVASTFNALISGFCRLGKDGSALKLL-EDM--VGRGCVPDTGSYSPLIDALCRKKS 550
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
FQ A+ LL+QMV GI PDYL WNSL CLSQQT
Sbjct: 551 FQKAASLLLQMVENGITPDYLIWNSLFHCLSQQT 584
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 163/370 (44%), Gaps = 42/370 (11%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF-NDMKIDGISWN 270
GR ++ + L + R G P++ +N ++ + + D A + M GI +
Sbjct: 95 GRARMIRDVIKVLDLVTRYGKNPSLKIFNSILDVLVKEDI-DLARKFYRKKMMGAGIQGD 153
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
TY L++GLC RI +G K+LQ+++ G K + YN++L+ L + A
Sbjct: 154 DYTYGILMKGLCLTNRIGEGFKLLQVIKS--RGLKPNVVIYNTLLHALCNNGKVGRARSL 211
Query: 331 LKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+ ++++ P V ++ I G+C + N A ++ G VP+VV ++ C
Sbjct: 212 MNEIKE--PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVG 269
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
RV EA E+++ + G + NT++ G C+ G V L++E R +G LP +
Sbjct: 270 RVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMER---KGCLPNAD 326
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL------------------- 491
Y+ LI CE G +SA + M GI +++T+++L+
Sbjct: 327 TYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELM 386
Query: 492 -----ICLSQQTTWLLLL-------LLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAG 539
+C + + +L +LNE + F+M + L + LR L GA
Sbjct: 387 EETRGVCGGSISPYNSVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGA- 445
Query: 540 SVWLGLRIHD 549
+ R++D
Sbjct: 446 -IQEAKRVYD 454
>gi|356495305|ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
mitochondrial-like [Glycine max]
Length = 618
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/513 (63%), Positives = 398/513 (77%), Gaps = 19/513 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MPHS+ +PP + IFIT+IRGLGRARM V+K DLV +F+ +PSLKIFNSILDVLVKED
Sbjct: 95 MPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLVYKFHGSPSLKIFNSILDVLVKED 154
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID+AR FYRK MMASGV+GDDYT+ ILMKGLCLTNR+G+GFKLL ++KSRGV PN+V+YN
Sbjct: 155 IDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYN 214
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LC+NGKVGRAR+LM++ME+PNDVTF+ILI YCKE N V ALVLLEKSFS GFVP
Sbjct: 215 TLLHALCRNGKVGRARNLMNEMEDPNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVP 274
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFL 224
DVV++TKVLE+LC+ GR M+A E+LE G L GKVK G FL
Sbjct: 275 DVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGLHFL 334
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K+ME KGCLPNVDTYN+LIS + E+G+LD ALD+FNDMK DGI WNFVT+DTLIRGLCS
Sbjct: 335 KQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSE 394
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
RI+DG IL+LME+SKEGS+G ISPYNS++YGL ++N DE+ E+L +M LFPRAVDR
Sbjct: 395 ERIEDGFSILELMEESKEGSRGHISPYNSIIYGLLKKNGFDESAEFLTKMGNLFPRAVDR 454
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL IL C G +EDAKR +DQMI+EGG+P++++Y+CL+H + ++ VREA ELM EM
Sbjct: 455 SLMILEHCKKGAIEDAKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIA 514
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+ PI STFN V++G CRQG V +ALKLVE+ RG +P + YSPLI LC G
Sbjct: 515 NNCFPIPSTFNAVITGFCRQGKVESALKLVEDI---TARGCVPNTETYSPLIDVLCRNGD 571
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Q A + +QMV KGILPD WNSLL+ LSQ+
Sbjct: 572 LQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQE 604
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 188/465 (40%), Gaps = 80/465 (17%)
Query: 114 PNSV----IYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLV 164
PN V Y LIH LC + + L+ +M P D F +I +
Sbjct: 63 PNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTR 122
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLEL--------------------------------- 191
+ +L+ + F P + +L++
Sbjct: 123 TVIKVLDLVYKFHGSPSLKIFNSILDVLVKEDIDMAREFYRKSMMASGVEGDDYTFGILM 182
Query: 192 --LCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
LC R+ + ++L+ +G R GKV + EME
Sbjct: 183 KGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED---- 238
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN T+NILIS YC+ G AL + G + V+ ++ LC+ GR + ++
Sbjct: 239 PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAEV 298
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
L+ +E G + YN+++ G + L +LKQME P ++ I GF
Sbjct: 299 LERVESM--GGLLDVVAYNTLIKGFCGAGKVKVGLHFLKQMENKGCLPNVDTYNVLISGF 356
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS---ELMKEMTGHGYL 408
G ++ A F+ M +G N V +D LI C EER+ + ELM+E + G
Sbjct: 357 SESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEE-SKEGSR 415
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQS 467
S +N+++ GL ++ + + + + G+L P + S +I C+KG +
Sbjct: 416 GHISPYNSIIYGLLKKNGFDESAEFLTK------MGNLFPRAVDRSLMILEHCKKGAIED 469
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
A + QM+ +G +P L +N L+ S+Q + L+NEM++
Sbjct: 470 AKRVYDQMIDEGGIPSILVYNCLVHGFSKQGNVREAVELMNEMIA 514
>gi|22325737|ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g17525, mitochondrial; Flags: Precursor
gi|330251547|gb|AEC06641.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 626
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/515 (58%), Positives = 383/515 (74%), Gaps = 19/515 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP SI PPD++IF+T+IRG GRAR+I V+ DLVS+F + PSLK+FNSILDVLVKED
Sbjct: 102 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 161
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID+AR F+ +KMMASG+ GD YTY ILMKGL LTNR+GDGFKLL +MK+ GV PN+V+YN
Sbjct: 162 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LCKNGKVGRARSLMS+M+EPNDVTF+ILI AYC E+ L+ ++VLLEK FS GFVP
Sbjct: 222 TLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT+TKV+E+LC+ GRV +A+E+LE +G LGK++ RF
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EMERKG LPNV+TYN+LI+ YC+ G+LDSALD FNDMK D I WNF T++TLIRGL G
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR DDGLKIL++M+DS RI PYN V+YG Y+EN+ ++ALE+L +MEKLFPRAVDR
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDR 461
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S K++ C G ++D K +DQMI EGGVP++++ CLIH Y Q ++ E+ EL+ +M
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
GYLP +STFN V+ G C+Q V +K V EDM RG +P + Y+PL++ LC KG
Sbjct: 522 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFV-EDM--AERGCVPDTESYNPLLEELCVKGD 578
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
Q A +L +MV K I+PD W+SL+ CLSQ+T
Sbjct: 579 IQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTA 613
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 177/414 (42%), Gaps = 32/414 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T++ L + V +A L+S P+ FN ++ E +
Sbjct: 215 PNAVVYNTLLHALCKN---GKVGRARSLMSEMK-EPNDVTFNILISAYCNEQKLIQSMVL 270
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K + G D T +M+ LC RV + ++L ++S+G K + V NTL+ C
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A+ +ME PN T+++LI YC L +AL + + T
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 185 ITKVLELLCSVGRVMDAVEILE-----ESGEQGRL-------------GKVKGGCRFLKE 226
++ L GR D ++ILE ++ R+ + + FL +
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLK 450
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME+ P + + S CE G +D ++ M +G + + LI G+
Sbjct: 451 MEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGK 508
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
I++ L+++ M G R S +N+V+ G ++++ +++++ M + P
Sbjct: 509 IEESLELINDM--VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESY 566
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
+ + CV G+++ A F +M+E+ VP+ ++ L+ Q+ + S L
Sbjct: 567 NPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 110/290 (37%), Gaps = 78/290 (26%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMED--------------------------------- 299
TY L LC R D ++L M D
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 300 -SKEGSKGRISPYNSVLYGLYRE-----------------------------------NQ 323
SK G K + +NS+L L +E N+
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ + L+ M+ + P AV + + C +G V A+ +M E PN V ++
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNI 253
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI AYC E+++ ++ L+++ G++P T V+ LC +G V AL+++E R
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLE---RVE 310
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G + L+K C G + A ++M KG LP+ T+N L+
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
>gi|29367150|gb|AAO72718.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 300/515 (58%), Positives = 383/515 (74%), Gaps = 19/515 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP SI PPD++IF+T+IRG GRAR+I V+ DLVS+F + PSLK+FNSILDVLVKED
Sbjct: 1 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 60
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID+AR F+ +KMMASG+ GD YTY ILMKGL LTNR+GDGFKLL +MK+ GV PN+V+YN
Sbjct: 61 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 120
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LCKNGKVGRARSLMS+M+EPNDVTF+ILI AYC E+ L+ ++VLLEK FS GFVP
Sbjct: 121 TLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 180
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT+TKV+E+LC+ GRV +A+E+LE +G LGK++ RF
Sbjct: 181 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 240
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EMERKG LPNV+TYN+LI+ YC+ G+LDSALD FNDMK D I WNF T++TLIRGL G
Sbjct: 241 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 300
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR DDGLKIL++M+DS RI PYN V+YG Y+EN+ ++ALE+L +MEKLFPRAVDR
Sbjct: 301 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDR 360
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S K++ C G ++D K +DQMI EGGVP++++ CLIH Y Q ++ E+ EL+ +M
Sbjct: 361 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 420
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
GYLP +STFN V+ G C+Q V +K V EDM RG +P + Y+PL++ LC KG
Sbjct: 421 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFV-EDMA--ERGCVPDTESYNPLLEELCVKGD 477
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
Q A +L +MV K I+PD W+SL+ CLSQ+T
Sbjct: 478 IQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTA 512
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 177/414 (42%), Gaps = 32/414 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T++ L + V +A L+S P+ FN ++ E +
Sbjct: 114 PNAVVYNTLLHALCKN---GKVGRARSLMSEMK-EPNDVTFNILISAYCNEQKLIQSMVL 169
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K + G D T +M+ LC RV + ++L ++S+G K + V NTL+ C
Sbjct: 170 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 229
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A+ +ME PN T+++LI YC L +AL + + T
Sbjct: 230 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 289
Query: 185 ITKVLELLCSVGRVMDAVEILE-----ESGEQGRL-------------GKVKGGCRFLKE 226
++ L GR D ++ILE ++ R+ + + FL +
Sbjct: 290 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLK 349
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME+ P + + S CE G +D ++ M +G + + LI G+
Sbjct: 350 MEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGK 407
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
I++ L+++ M G R S +N+V+ G ++++ +++++ M + P
Sbjct: 408 IEESLELINDM--VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESY 465
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
+ + CV G+++ A F +M+E+ VP+ ++ L+ Q+ + S L
Sbjct: 466 NPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 519
>gi|297832366|ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
gi|297329905|gb|EFH60324.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
lyrata]
Length = 1056
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 301/526 (57%), Positives = 388/526 (73%), Gaps = 19/526 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP S PPD++IF+T+IRG GRAR+ V+ DLVS+F + PSLK+FNSILDVLVKED
Sbjct: 90 MPESTGLPPDDAIFVTIIRGFGRARLTKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 149
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID+AR F+R+KMMASG+QGD+YTY ILMKGLCLTNR+GDGFKLL +MK+ GV PN+V+YN
Sbjct: 150 IDIAREFFRRKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTCGVAPNTVVYN 209
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LCKNGKVGRARSLMS+M+EPNDVTF+ILI AYC E+ L+ ++VLLEK FS G VP
Sbjct: 210 TLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGLVP 269
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT+TKV+E+LC+ GRV +A+E+LE +G +GK++ RF
Sbjct: 270 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFF 329
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+EMERKG LPNV+TYN+LI+ +C+ G+LDSALD FNDMK D I WNF T++TLIRGL
Sbjct: 330 QEMERKGYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSVR 389
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR DDG+KIL+LM+DS+ RI PYNSV+YG Y+EN+ ++ALE+L +MEKLFPRAVDR
Sbjct: 390 GRTDDGIKILELMQDSETVHGARIDPYNSVIYGFYKENRWEDALEFLLKMEKLFPRAVDR 449
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S K++ C G ++D K +DQM EGGVP+V++ CLIH Y QE + E EL+ +M
Sbjct: 450 SFKLISLCEKGGMDDVKTAYDQMTGEGGVPSVIVSHCLIHRYSQEGYMEETLELINDMVT 509
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
GYLP +STFN V+ G C++ V +K V EDM RG +P Y+PL++ LC KG
Sbjct: 510 RGYLPRSSTFNAVIIGFCKEDKVMNGIKFV-EDM--AERGCVPDRESYNPLLEELCVKGD 566
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
Q A +LL MV K I+PD W+SL+ CLSQ+T L L +++
Sbjct: 567 IQKAWLLLSLMVEKSIVPDSSMWSSLMFCLSQKTAIHLNTSLQDII 612
>gi|357484175|ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513709|gb|AES95332.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 296/503 (58%), Positives = 378/503 (75%), Gaps = 19/503 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP SI + P E IFIT++RGL RA M V+ DL +F+ TPSLKIFNSILDVLVKED
Sbjct: 97 MPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDLAYKFHGTPSLKIFNSILDVLVKED 156
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID+AR FYRK MM SGV+GDDYT+ ILMKGLCLTNR+G+GFKLL ++K+ GV PN+VIYN
Sbjct: 157 IDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYN 216
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LC+NGKVGRARSLM++M +PN+VTF+ILI +Y KEENLV ALVLLEK F+ VP
Sbjct: 217 TLLHALCRNGKVGRARSLMNEMVDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVP 276
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT+TKV+E+LC+ GRV +A E+LE G +GKVK G FL
Sbjct: 277 DVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFL 336
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K+ME KG LPNVDTYNILI +CE+ +LD ALD+FNDMK DGI+ NFVT+DT+IRGLCS
Sbjct: 337 KQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGLCSE 396
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GRI+DG IL+LME++KEGSKG ISPYNS++YGL+++N+ DEA E+L +M KLFPRAVDR
Sbjct: 397 GRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAKMGKLFPRAVDR 456
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ I+ C +G +EDAK +D+MI+EGG+P++++Y+ L+H + Q +REA EL+ EM
Sbjct: 457 SMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMIS 516
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+ PIASTFN +++ C QG + +ALK +E+ RG +P + YSPLI LC KG
Sbjct: 517 NNCFPIASTFNAIITEFCEQGKIESALKFMEDIT---ARGCVPNTETYSPLIDVLCRKGD 573
Query: 465 FQSASMLLVQMVGKGILPDYLTW 487
Q A + ++MV KGILPD W
Sbjct: 574 IQKALQVFLEMVEKGILPDQCIW 596
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 191/457 (41%), Gaps = 78/457 (17%)
Query: 119 YNTLIHSLCKNGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKS 173
Y TLIH LC + + L+ +M P + F ++ + + +L+ +
Sbjct: 74 YRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDLA 133
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAV-----EILEESGEQGR-------------LG 215
+ F P + +L++L V +D + + ESG +G
Sbjct: 134 YKFHGTPSLKIFNSILDVL--VKEDIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTN 191
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
++ G + L+ ++ G PN YN L+ + C G + A + N+M + N VT++
Sbjct: 192 RIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEM----VDPNEVTFN 247
Query: 276 TLIRG-----------------------------------LCSGGRIDDGLKILQLMEDS 300
LI LC+ GR+ + ++L+ +E S
Sbjct: 248 ILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVE-S 306
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
GS ++ YN+++ G + L +LKQME P ++ I GFC ++
Sbjct: 307 LGGSLDAVA-YNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLD 365
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS---ELMKEMTGHGYLPIASTFN 415
A F+ M +G N V +D +I C E R+ + ELM+E T G S +N
Sbjct: 366 LALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEE-TKEGSKGHISPYN 424
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ GL +Q A E + +G+ P + S I C++G + A + +M
Sbjct: 425 SIIYGLFKQNRFDEA----SEFLAKMGK-LFPRAVDRSMTIIQKCKEGAIEDAKNIYDKM 479
Query: 476 VGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
+ +G +P L +NSL+ SQ + + L+NEM+S
Sbjct: 480 IDEGGIPSILVYNSLVHGFSQHGSIREAVELINEMIS 516
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 124/309 (40%), Gaps = 79/309 (25%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLM---------ED---------SKEGSKGRI------ 308
TY TLI LC R D ++L M ED S+ G R+
Sbjct: 73 TYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLDL 132
Query: 309 ------SP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
+P +NS+L L +E+ Y K M + R D + IL G C+
Sbjct: 133 AYKFHGTPSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNR 192
Query: 357 VEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ + + Q+I+ GV PN VIY+ L+HA C+ +V A LM EM P TFN
Sbjct: 193 IGEGFKLL-QLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEMVD----PNEVTFN 247
Query: 416 TVLSGLCRQGNVGTALKLVE------------------EDMRGIGR-------------- 443
++S ++ N+ AL L+E E + GR
Sbjct: 248 ILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESL 307
Query: 444 -GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTW 500
GSL Y+ LIK C G + L QM KG LP+ T+N L+ C S+
Sbjct: 308 GGSLDAVA-YNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLD- 365
Query: 501 LLLLLLNEM 509
L L L N+M
Sbjct: 366 LALDLFNDM 374
>gi|356498456|ref|XP_003518068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g17525, mitochondrial-like, partial [Glycine
max]
Length = 435
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 233/431 (54%), Positives = 306/431 (70%), Gaps = 27/431 (6%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ ILMKGLCLTNR+ +GFKLL ++KSRGV N+++YNTLIH+LC+NG+VGRAR+LM++M+
Sbjct: 1 FXILMKGLCLTNRIVEGFKLLQLIKSRGVASNTMVYNTLIHALCRNGEVGRARNLMNEMK 60
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+PNDVTF+ILI Y KE N V AL+LLEKSFS GFVPDVV++T VLE+LC+VG ++A E
Sbjct: 61 DPNDVTFNILIFGYYKEGNSVWALILLEKSFSMGFVPDVVSVTMVLEILCNVGCTIEAAE 120
Query: 204 ILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L+ G L G VK G FLK+ME KGCLPNVDTYN+LIS +C
Sbjct: 121 VLDXIESMGGLLDVVAXNTLIKGFCEAGNVKVGLHFLKQMESKGCLPNVDTYNVLISGFC 180
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
E+ +LD LD+FNDMK DGI WNFVT+DT+IRGLCS GRI+DG IL+ ME+SKEGS+G
Sbjct: 181 ESKMLDLVLDLFNDMKTDGIKWNFVTFDTIIRGLCSEGRIEDGFSILESMEESKEGSRGH 240
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
I+PYNS++YGL ++N D+ E+L +M LFPR VD+SL I C G++EDA+R DQM
Sbjct: 241 INPYNSIIYGLLKQNXFDDTTEFLTKMGNLFPRVVDKSLMIFEHCKKGSIEDAERLCDQM 300
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
I+EGG+ ++++Y+CL+H + Q+ R+ EA ELM EM + PI STFN V+ V
Sbjct: 301 IDEGGISSILVYNCLVHGFSQQGRIXEAVELMNEMIANNRFPIPSTFNVVIX-------V 353
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK-GILPDYLT 486
ALKLVEE RG +P + YS LI LC A + ++M+ K GILPD
Sbjct: 354 EGALKLVEEI---TARGCVPNTETYSSLIDVLCRNENLXKAMXVFMEMIDKGGILPDQFI 410
Query: 487 WNSLLICLSQQ 497
WNS+L+ L+ +
Sbjct: 411 WNSMLLRLTSE 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 48/243 (19%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M + G + TY +L+ G C + + L + MK+ G+K N V ++T+I LC
Sbjct: 156 FLKQMESKGCLPNVDTYNVLISGFCESKMLDLVLDLFNDMKTDGIKWNFVTFDTIIRGLC 215
Query: 128 KNGKVGRARSLMSDMEE---------------------------------------PNDV 148
G++ S++ MEE P V
Sbjct: 216 SEGRIEDGFSILESMEESKEGSRGHINPYNSIIYGLLKQNXFDDTTEFLTKMGNLFPRVV 275
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
S++I +CK+ ++ +A L ++ G + ++ ++ GR+ +AVE++ E
Sbjct: 276 DKSLMIFEHCKKGSIEDAERLCDQMIDEGGISSILVYNCLVHGFSQQGRIXEAVELMNEM 335
Query: 209 GEQGRLG---------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
R V+G + ++E+ +GC+PN +TY+ LI C L A+ VF
Sbjct: 336 IANNRFPIPSTFNVVIXVEGALKLVEEITARGCVPNTETYSSLIDVLCRNENLXKAMXVF 395
Query: 260 NDM 262
+M
Sbjct: 396 MEM 398
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 246/490 (50%), Gaps = 28/490 (5%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PPD + ++ GL +AR + D V+ ++VS ++ + + + + + + +D AR
Sbjct: 36 PPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 95
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++M+ G+ + TY+ L+ GLC R+ + L+ M RG P V YN++I
Sbjct: 96 LV-EEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGF 154
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ +V A M M P+ +T++ LI +CK ++ L LL + GF PD+
Sbjct: 155 CRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDI 214
Query: 183 VTITKVLELLCSVGRVMDAVEILEES-------------GEQGRLGKVKGGCRFLKEMER 229
VT + V++ LC GR+ DAV+I EE G R G + R L +M
Sbjct: 215 VTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
C P+V TY L+S++C+ G LD A ++F M + +S + VT+ +L+ GLC GR++D
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
L++L+ E ++ G I YN V+ G + NQ +A E + P V ++
Sbjct: 335 ALELLE--EITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G C G + A + DQ+ EGG +V +Y ++ A C++ R +A + +EM
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 452
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
GY+P A+TF TV+ LC+ A +L+EE I G PG G ++ A C G
Sbjct: 453 GYVPAAATFATVVFALCKAHQPQQAHELLEE---MIKYGHTPGPGTCDAVVSAYCRAGMI 509
Query: 466 QSASMLLVQM 475
Q A L ++
Sbjct: 510 QKADELASEL 519
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 214/420 (50%), Gaps = 26/420 (6%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSL---MSDMEEPNDVTFSILICAYCKEENLVNALV 168
+ P ++++N +I LC+ G++ A + M+D P+ +T++ L+ K L +A+
Sbjct: 1 MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQ 60
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGC 221
+L++ S VPD T+T V++ LC RV DA E++EE +G V G C
Sbjct: 61 VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120
Query: 222 R---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ ++ M +GC P V TYN +I+ +C +D A M +G + +
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY LI G C + GL++L E ++ G I Y++V+ GL + + +A++ +
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLG--EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFE 238
Query: 333 QMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+M P A+ + I G+C G++++A R +M+++ P+VV Y L+ A+C+ R+
Sbjct: 239 EM-SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A EL ++M + P TF +++ GLC +G + AL+L+EE R RG P Y
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR---RGCPPTIYTY 354
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS 511
+ ++ C+ + A L+ +G +P+ +T+N L+ C T L L+++ S
Sbjct: 355 NCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNS 414
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 136/313 (43%), Gaps = 60/313 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DID----- 62
PD + TVI GL +A + D V D+ + P+ +NS++ + D+D
Sbjct: 212 PDIVTYSTVIDGLCKAGRLRDAV---DIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRL 268
Query: 63 ------------------LARAFYR-----------KKMMASGVQGDDYTYAILMKGLCL 93
L AF + ++M+A+ + D T+ L+ GLC
Sbjct: 269 LGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCG 328
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
R+ D +LL + RG P YN ++ CK +V +A L++D PN VT
Sbjct: 329 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVT 388
Query: 150 FSILICAYCKEENLVNALVLLEKSFS-FGFVPDVVTITKV-LELLCSVGRVMDAVEILEE 207
++IL+ C+ AL L++ S G P V + + L+ LC GR DAV+ EE
Sbjct: 389 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
++G + + + L+EM + G P T + ++S+YC G+
Sbjct: 449 MIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 508
Query: 252 LDSALDVFNDMKI 264
+ A ++ +++++
Sbjct: 509 IQKADELASELRL 521
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 260/536 (48%), Gaps = 60/536 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES+FI +++ G+A + + D+ ++ P+ K +N +LD+LV D
Sbjct: 134 ESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVF 193
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ GV YT+ ++MK LC+ + V LL M G PNSVIY TLIH+LC+N
Sbjct: 194 YDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCEN 253
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ DM EP+ TF+ +I C+ + A LL++ GF D +T
Sbjct: 254 NRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTY 313
Query: 186 TKVLELLCSVGRVMDAVEILEE-------------SG--EQGRL---------------- 214
++ LC +G+V +A +L + SG GR
Sbjct: 314 GYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGY 373
Query: 215 ------------GKVKGG-----CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
G VK G L EM K PNV TY ILI+ +C+ G L+ A +
Sbjct: 374 EPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAE 433
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ N M G+S N V Y+ LI LC G I++ L++ E S +G K I +NS++ G
Sbjct: 434 IVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFG--EMSGKGCKPDIYTFNSLING 491
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + ++ +EAL M E + V + + F + +++ A + D+M+ G +
Sbjct: 492 LCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLD 551
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ Y+ LI A C+ V + L +EM G G P + N ++SGLCR G V ALK +
Sbjct: 552 NITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFL- 610
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+DM I RG P Y+ LI LC+ G Q AS L ++ +GI PD +T+N+L+
Sbjct: 611 QDM--IHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 229/477 (48%), Gaps = 32/477 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ T+I L +++ ++ + + P ++ FN ++ L + A
Sbjct: 238 PNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKL 297
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G D TY LM GLC +V + LL+ + + PN+V+YNTLI
Sbjct: 298 LDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVA 353
Query: 129 NGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G+ A+ L+ + EP+ TF+I+I K+ LV+AL LL + + F P+V+
Sbjct: 354 SGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVI 413
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T ++ C GR+ +A EI+ +G + G ++ + EM
Sbjct: 414 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC P++ T+N LI+ C+ ++ AL +++DM ++G+ N VTY+TL+ I
Sbjct: 474 SGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSI 533
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
K++ M G YN ++ L + ++ L ++M + +FP + +
Sbjct: 534 QQAFKLVDEM--LFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCN 591
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C G V DA + MI G P++V Y+ LI+ C+ V+EAS L ++
Sbjct: 592 ILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P A T+NT++S C +G A L+ +G+ G +P +S LI + +K
Sbjct: 652 GIRPDAITYNTLISRHCHEGMFNDACLLL---YKGVDSGFIPNEVTWSILINYIVKK 705
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 177/401 (44%), Gaps = 42/401 (10%)
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPN----DVTFSI 152
KLL MK G+ ++ ++ K G G+A L+ DM +P +V I
Sbjct: 120 KLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDI 179
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L+ C A + S G P V T V++ LC V V A
Sbjct: 180 LVDGDCPRV----APNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA----------- 224
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
C L++M + GC+PN Y LI + CE + AL + DM + +
Sbjct: 225 --------CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQ 276
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
T++ +I GLC GRI + K+L M G Y +++GL R Q DEA L
Sbjct: 277 TFNDVIHGLCRAGRIHEAAKLLDRM--LLRGFSTDALTYGYLMHGLCRMGQVDEARALLN 334
Query: 333 QMEKLFPRAVDRSLKILGFCVDGNVEDAKR-CFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
++ P V + I G+ G E+AK ++ M+ G P+ ++ +I ++
Sbjct: 335 KIPN--PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 392
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSG 450
+ A EL+ EM + P T+ +++G C+QG + A ++V +G+ ++
Sbjct: 393 LVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTV---- 448
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI ALC+ G + A L +M GKG PD T+NSL+
Sbjct: 449 GYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLI 489
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 265/546 (48%), Gaps = 59/546 (10%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+ P +++ T I ++ + + + R + P+L N++L+ LV+ + +
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190
Query: 67 FYRKKM---MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
F R+ + G+ + T+ I++ G CL N+ D + L+VM P++V YNT++
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+LCK G++G AR L+ DM+ PN T++IL+ YCK L A ++E +
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRF 223
PDV T ++ LC+ GR+ +A ++ +E L K+ +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+EM KG PN T+NI++ YC+ G +D A + M+ G S + VTY+TLI G C
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
G + + + + M ++ K N++L L RE + +EA + L K F
Sbjct: 431 AGNMGEAFRTMDEM--GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V I+G+ DGNV+ A + +D+M E+ +P+ V Y+C+I CQ + +A + E
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTAL----KLVEED-----------MRG------ 440
+ G LP +T+NT+L G CR+G+V A K+VE +RG
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGV 608
Query: 441 -----------IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
+ +G + Y+ LI +LC++G A LL +M K + PD+ T+N+
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 490 LLICLS 495
++ L+
Sbjct: 669 IITALT 674
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 256/565 (45%), Gaps = 89/565 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-------- 60
P+ + F VI G D V+ +++ ++N +P +N+ILD L K+
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDL 265
Query: 61 -IDLA-------RAFYR-------------------KKMMASGVQGDDYTYAILMKGLCL 93
+D+ R Y + M + + D +TY +L+ GLC
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
R+ + FKL M++ + P+ V YNTLI+ + K+ A L+ +M E PN VT
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+I++ YCKE + +A + K GF PD VT ++ C G + +A ++E G
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ R K++ + L ++G + +Y LI Y + G +D
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKEGSKGRISPYN 312
AL ++++MK I + VTY+ +I GLC G+ + + K+ +L+E G + YN
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES---GLLPDETTYN 562
Query: 313 SVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L+G RE ++A ++ +M E F P ++ + G C++G +E A + F+ + +
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSK 622
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + V Y+ LI + C+E R+ +A L+ EM P T+N +++ L G + A
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682
Query: 431 LKLVEEDM-RGIGRGSLPGS-----------------------GHYSPLIKALCEKGGFQ 466
EE M + + +G+LP YS IK LC +G ++
Sbjct: 683 ----EEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A + + KGI D T+ +L+
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLM 763
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 213/495 (43%), Gaps = 80/495 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + + ++ G + + + +L+++ N+ P + +N +++ L E + AF
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG-RIEEAFK 334
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R +M + D +Y L+ G +++ + FKLL M +GVKPN+V +N ++ C
Sbjct: 335 LRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYC 394
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A + ++ MEE P+ VT++ LI YCK N+ A +++ D V
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T+ +L LC ++ +A ++L + ++G G V + EM
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ K +P+ TYN +I C+ G + A+ N++ G+ + TY+T++ G C G +
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 288 DDGLKILQLMEDSK-----------------EG-------------SKGR---ISPYNSV 314
+ + M ++ EG SKG+ YN++
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ L +E + D+A L +ME+ L P + I G + +A+ +M+E+G
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGN 694
Query: 373 VPNVVI-----------------------YDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+P+ V+ Y I C E + ++A + E G
Sbjct: 695 LPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITV 754
Query: 410 IASTFNTVLSGLCRQ 424
ST+ ++ GL ++
Sbjct: 755 DKSTYINLMDGLIKR 769
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 247/490 (50%), Gaps = 39/490 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
P+ S++ + R + + D ++ + R +P +N+I+ K D D A F
Sbjct: 193 PEVSVYTILTRAFCKTGRLKDALE----IFRNIPSPDAIAYNAIIHGHCRKNDCDGALEF 248
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M V D +TY IL+ GLC ++ ++LH M RGV P++V +N+++ LC
Sbjct: 249 L-KEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLC 307
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK RA SL++ M E P+ T++ LI CK++N+ A L+++ S GFVPDVV
Sbjct: 308 KAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVV 367
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + + + LC GR+ +A E+ +KEM KGC PN+ TYN LI
Sbjct: 368 TYSILADGLCKRGRIDEAFEL-------------------VKEMSGKGCTPNLVTYNTLI 408
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ + A ++ + G + VTY ++ GLC GR+D LK+++ M K G
Sbjct: 409 DGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM--LKRG 466
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +++ GL R + DEA K+M + A+ + G+C ++A+
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D + G P + +Y+ L+ YC+E R+ E + ++M G +P T+N V+ GL
Sbjct: 527 KVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ G V A +E G +P Y+ +I L + + A +L QM+ GI
Sbjct: 584 CKHGKVDEAFPFLESMHSA---GCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIP 640
Query: 482 PDYLTWNSLL 491
PD +T+N+L+
Sbjct: 641 PDAVTYNTLM 650
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 270/563 (47%), Gaps = 53/563 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +++ GL +A +++ N PS +N+++ L K+ ++D A+
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++SG D TY+IL GLC R+ + F+L+ M +G PN V YNTLI LC
Sbjct: 354 V-DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLC 412
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K +A SL+S P+ VT++I++ CKE L AL ++E G P V+
Sbjct: 413 KASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 472
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++E LC GRV +A I KEM K C + Y L+
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIF-------------------KEMVSKDCTADALAYVSLV 513
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWN--FVTYDTLIRGLCSGGRIDDGLKILQLMED-S 300
+ YC++ A V +DGI Y+ L+ G C GR+D+ I + ED +
Sbjct: 514 NGYCKSSRTKEAQKV-----VDGIRGTPYIDVYNALMDGYCKEGRLDE---IPNVFEDMA 565
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
G I YN V+ GL + + DEA +L+ M P V ++ I G +
Sbjct: 566 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPK 625
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A++ DQMI+ G P+ V Y+ L+ +C+EER +A ++K M G P T+NT++
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 685
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
SGL + +G A +L+ E +R + Y+ +I LC++G + A +L+ M G
Sbjct: 686 SGLSQTNRLGDAYELMHEMLR--NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743
Query: 479 GILPDYLTWNSLL--IC----LSQQTTWLLLL-LLNEMVSFVMVVHELSAKEKRCKLRSL 531
G+ + +T+N + +C L + ++ L + L + VS+ V+ L CK L
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGL------CKAEQL 797
Query: 532 NHLAHGAGSVWLGLRIHDTTHTF 554
+ + A + + T+HTF
Sbjct: 798 DRASKLAREMVAVKGLCITSHTF 820
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 213/437 (48%), Gaps = 26/437 (5%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ +G D YTY +++K LC N++ F +L K RG KP +Y L + CK
Sbjct: 149 ERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKT 208
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
G++ A + ++ P+ + ++ +I +C++ + AL L++ PDV T ++
Sbjct: 209 GRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILI 268
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
+ LC + A E+L E ++G + GK + L M + C
Sbjct: 269 DGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCR 328
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+ TYN LIS C+ +D A D+ ++ G + VTY L GLC GRID+ ++
Sbjct: 329 PSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 388
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
++ M S +G + YN+++ GL + ++ ++A E L+ + P V ++ + G
Sbjct: 389 VKEM--SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +G ++ A + + M++ G P+V+ Y L+ C+ RV EA + KEM A
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+ ++++G C+ A K+V+ GI RG+ P Y+ L+ C++G +
Sbjct: 507 LAYVSLVNGYCKSSRTKEAQKVVD----GI-RGT-PYIDVYNALMDGYCKEGRLDEIPNV 560
Query: 472 LVQMVGKGILPDYLTWN 488
M +G +P+ T+N
Sbjct: 561 FEDMACRGCVPNIKTYN 577
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 207/437 (47%), Gaps = 39/437 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAF 67
D +++++ G ++ + K D + TP + ++N+++D KE ++ F
Sbjct: 505 DALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGYCKEGRLDEIPNVF 561
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G + TY I+M GLC +V + F L M S G P+ V YN +I L
Sbjct: 562 --EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K AR ++ M + P+ VT++ L+ +CKEE +A+ +L+ G PD V
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV-DTYNIL 242
T ++ L R+ DA E++ E M R GC+ + TYN +
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHE-------------------MLRNGCVVSACTTYNTI 720
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C+ G L AL + + M G+ N VTY+ I LC GR+D+ +L M+ ++
Sbjct: 721 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 780
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVED 359
Y +V+ GL + Q D A + ++M + L + +L I F +++
Sbjct: 781 EVS-----YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 835
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M++ G P+V+ Y+ +I C+ ++V +A EL EM G + + ++ ++
Sbjct: 836 ALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 895
Query: 420 GLCRQGNVGTALKLVEE 436
GLC QG AL+++EE
Sbjct: 896 GLCGQGRGKEALQVLEE 912
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 177/382 (46%), Gaps = 56/382 (14%)
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------------- 212
+ E+ G+ PD T V++ LC + ++ A +L+++ +G
Sbjct: 146 AMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAF 205
Query: 213 -RLGKVK----------------------GGCR---------FLKEMERKGCLPNVDTYN 240
+ G++K G CR FLKEM + P+V TYN
Sbjct: 206 CKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYN 265
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
ILI C+ D A ++ ++M G++ + VT+++++ GLC G+ + +L +M +
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM--A 323
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ + YN+++ GL ++ D A + + + P V S+ G C G ++
Sbjct: 324 ERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRID 383
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A +M +G PN+V Y+ LI C+ + +A EL++ + G++P T+ ++
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GLC++G + ALK+VE ++ RG P Y+ L++ LC G A + +MV K
Sbjct: 444 DGLCKEGRLDKALKMVEGMLK---RGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Query: 479 GILPDYLTWNSLL--ICLSQQT 498
D L + SL+ C S +T
Sbjct: 501 DCTADALAYVSLVNGYCKSSRT 522
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 154/326 (47%), Gaps = 37/326 (11%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
HS PD + +I GL +A + + D + + + P +N+++ KE+
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNT 121
K M+ +GV D+ TY L+ GL TNR+GD ++L+H M G V YNT
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I LCK G + +A LM M E N VT++I I CKE L A LL +
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE---MD 776
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC---------------- 221
+ D V+ T V+ LC ++ A ++ E + VKG C
Sbjct: 777 TLRDEVSYTTVIIGLCKAEQLDRASKLARE------MVAVKGLCITSHTFNLLIDAFTKT 830
Query: 222 -------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
L M ++GC P+V TYN++I+ C+ +D A ++F++M + GI + V+Y
Sbjct: 831 KRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 890
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDS 300
LI GLC GR + L++L+ M S
Sbjct: 891 TVLIYGLCGQGRGKEALQVLEEMASS 916
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 150/329 (45%), Gaps = 45/329 (13%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ-- 295
T N + + E G D +F M G + + TY +I+ LC +ID +L
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186
Query: 296 -----------------------LMEDSKEGSKGRISP----YNSVLYGLYRENQQDEAL 328
++D+ E + SP YN++++G R+N D AL
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGAL 246
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E+LK+M K+ P ++ I G C + A +M++ G P+ V ++ ++
Sbjct: 247 EFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGL 306
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ + A L+ M P T+NT++SGLC+Q NV A LV+E + G +
Sbjct: 307 CKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDE---FVSSGFV 363
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLL 504
P YS L LC++G A L+ +M GKG P+ +T+N+L+ +C + +T L
Sbjct: 364 PDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYEL 423
Query: 505 L--------LNEMVSFVMVVHELSAKEKR 525
L + ++V++ ++V L KE R
Sbjct: 424 LESLVSSGFVPDVVTYTIIVDGL-CKEGR 451
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/546 (28%), Positives = 265/546 (48%), Gaps = 59/546 (10%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+ P +++ T I ++ + + + R + P+L N++L+ LV+ + +
Sbjct: 131 TSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVS 190
Query: 67 FYRKKM---MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
F R+ + G+ + T+ I++ G CL N+ D + L+VM P++V YNT++
Sbjct: 191 FSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+LCK G++G AR L+ DM+ PN T++IL+ YCK L A ++E +
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRF 223
PDV T ++ LC+ GR+ +A ++ +E L K+ +
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+EM KG PN T+NI++ YC+ G +D A + M+ G S + VTY+TLI G C
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
G + + + + M ++ K N++L L RE + +EA + L K F
Sbjct: 431 AGNMGEAFRTMDEM--GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDE 488
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V I+G+ DGNV+ A + +D+M E+ +P+ V Y+C+I CQ + +A + E
Sbjct: 489 VSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNE 548
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTAL----KLVEED-----------MRG------ 440
+ G LP +T+NT+L G CR+G+V A K+VE +RG
Sbjct: 549 LLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGM 608
Query: 441 -----------IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
+ +G + Y+ LI +LC++G A LL +M K + PD+ T+N+
Sbjct: 609 LEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNA 668
Query: 490 LLICLS 495
++ L+
Sbjct: 669 IITALT 674
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 255/565 (45%), Gaps = 89/565 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-------- 60
P+ + F VI G D V+ +++ ++N +P +N+ILD L K+
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDL 265
Query: 61 -IDLA-------RAFYR-------------------KKMMASGVQGDDYTYAILMKGLCL 93
+D+ R Y + M + + D +TY +L+ GLC
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
R+ + FKL M++ + P+ V YNTLI+ + K+ A L+ +M E PN VT
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+I++ YCKE + +A + K GF PD VT ++ C G + +A ++E G
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ R K++ + L ++G + +Y LI Y + G +D
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKEGSKGRISPYN 312
AL ++++MK I + VTY+ +I GLC G+ + + K+ +L+E G + YN
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLES---GLLPDETTYN 562
Query: 313 SVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L+G RE ++A ++ +M E F P ++ + G C++G +E A + F+ + +
Sbjct: 563 TILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSK 622
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + V Y+ LI + C+E R+ +A L+ EM P T+N +++ L G + A
Sbjct: 623 GKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREA 682
Query: 431 LKLVEEDM-RGIGRGSLPGS-----------------------GHYSPLIKALCEKGGFQ 466
EE M + + +G LP YS IK LC +G ++
Sbjct: 683 ----EEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A + + KGI D T+ +L+
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLM 763
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 212/495 (42%), Gaps = 80/495 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + + ++ G + + + +L+++ N+ P + +N +++ L E + AF
Sbjct: 276 PNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEG-RIEEAFK 334
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R +M + D +Y L+ G +++ + FKLL M +GVKPN+V +N ++ C
Sbjct: 335 LRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYC 394
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A + ++ MEE P+ VT++ LI YCK N+ A +++ D V
Sbjct: 395 KEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSV 454
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T+ +L LC ++ +A ++L + ++G G V + EM
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ K +P+ TYN +I C+ G + A+ N++ G+ + TY+T++ G C G +
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574
Query: 288 DDGLKILQLMEDSK-----------------EG-------------SKGR---ISPYNSV 314
+ + M ++ EG SKG+ YN++
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTL 634
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ L +E + D+A L +ME+ L P + I G + +A+ +M+E+G
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGX 694
Query: 373 VPNVVI-----------------------YDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+P V+ Y I C E + ++A + E G
Sbjct: 695 LPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITV 754
Query: 410 IASTFNTVLSGLCRQ 424
ST+ ++ GL ++
Sbjct: 755 DKSTYINLMDGLIKR 769
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 162/579 (27%), Positives = 266/579 (45%), Gaps = 95/579 (16%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES+FI +++ GRA + + D+ + PS + +N +LDVLV + +
Sbjct: 139 ESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVF 198
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ GV +DYT+ ++MK LC+ N V + LL M G PNS+IY TLI +L K
Sbjct: 199 YDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKR 258
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M P+ TF+ +I +C+ ++ L+++ GF P+ +T
Sbjct: 259 DRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTY 318
Query: 186 TKVLELLCSVGRVMDAVEILEESG---------------EQGRLGK-------------- 216
++ LC R+ +A +L + GRL +
Sbjct: 319 GYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGY 378
Query: 217 ----------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
V G C+ + +M+ KGC PN++TY ILI +C+ G L+ A
Sbjct: 379 VPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGL 438
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ +M G S N V Y+ LI LC G+I + L + E S +G K I +NS+++G
Sbjct: 439 ILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFG--EMSSKGCKPDIFTFNSLIFG 496
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF------------------------ 351
L R ++ ++AL + M E + +V + I F
Sbjct: 497 LCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLD 556
Query: 352 -----------CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
C G VE F++MI +G P+++ + LI+ +C +V A E M+
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMR 616
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G+ P T+N++++GLC++G + AL L E+ G P S Y+ LI LC
Sbjct: 617 DMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQ---AEGIQPDSITYNTLICWLC 673
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
+G F A LL + V G +P+ +TWN L+ +Q+
Sbjct: 674 REGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 215/472 (45%), Gaps = 56/472 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ T+I L + +++ +K + + P + FN+++ + + L A
Sbjct: 243 PNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKL 302
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL---------HV------------- 106
+M+ G +D TY LM GLC T R+ + LL H
Sbjct: 303 VDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRL 362
Query: 107 ----------MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
M + G P+ ++TL++ LCK G G A L++DM+ +PN T++I
Sbjct: 363 NEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTI 422
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI +CK+ L A ++L + + GF + V ++ LC G++ +A+++ E +G
Sbjct: 423 LIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R+ +++ ++M +G + N T+N LI ++ G + AL
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ NDM G + +TY+ LI+ LC G ++ GL + + E ++G I N ++
Sbjct: 543 KLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFE--EMIRKGLTPSIITCNILIN 600
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
G + ALE+++ M P V + I G C G +++A F+++ EG P
Sbjct: 601 GFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQP 660
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
+ + Y+ LI C+E +A L+ +G++P T+N ++ +Q N
Sbjct: 661 DSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSN 712
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 194/452 (42%), Gaps = 97/452 (21%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRF--------NMT---------------- 43
PPD + F TVI G R +N V++ LV R +MT
Sbjct: 277 PPDVNTFNTVIYGFCR---LNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDE 333
Query: 44 ----------PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
P++ FN++++ V+ ++ A AF KM+ +G D +T++ L+ GLC
Sbjct: 334 AQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLC 393
Query: 93 LTNRVGDGFKLLHVMKSRGVKPN-----------------------------------SV 117
G +L++ M ++G KPN +V
Sbjct: 394 KKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTV 453
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKS 173
YN LI +LCK+GK+ A + +M +P+ TF+ LI C+ + + +AL L
Sbjct: 454 GYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDM 513
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
G + + VT ++ G + +A++++ + +G + G V
Sbjct: 514 VLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAV 573
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ G +EM RKG P++ T NILI+ +C G + +AL+ DM G S + VTY++L
Sbjct: 574 EKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSL 633
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--LEYLKQME 335
I GLC GRI + L + + ++ EG + YN+++ L RE D+A L Y
Sbjct: 634 INGLCKRGRIQEALNLFEKLQ--AEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVEN 691
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
P V ++ + F N E + Q
Sbjct: 692 GFVPNDVTWNILVYNFGKQSNSEGQTITYAQF 723
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 244/471 (51%), Gaps = 32/471 (6%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ +N++L L + AR F M+ GV + YTY IL++ LC R+ +
Sbjct: 115 APSVPAYNAVLLALSDASLPSARRFL-SSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAY 157
++ M+ G PN+V YNTL+ + C+ G++ A ++S M E PN VTF+ ++
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK + A + ++ G PDVV+ +L C VG + +++ + E
Sbjct: 234 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE---------- 283
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
M ++G +P+V T+ LI + C+ G L+ A+ + M+ G+ N VT+ L
Sbjct: 284 ---------MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-- 335
I G C G +DD L L + E K G + + YN+++ G + + D A E +++ME
Sbjct: 335 IDGFCKKGFLDDAL--LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
++ P V S I G+C GN++ A + +M+++G +P+ + Y LI C+E+R+ +A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL + M G P T+ T++ G C++GNV AL L +E +R +G LP YS L
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR---KGVLPDVVTYSVL 509
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
I L + + A LL ++ + +PD + +++L++C S+ ++ LL
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 222/486 (45%), Gaps = 80/486 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLV-SRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P+ + T++ RA ++ + L+ N P+L FNS+++ L K ++ AR
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 244
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +M+ G+ D +Y L+ G C + + + M RG+ P+ V + +LIH+
Sbjct: 245 VF-DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303
Query: 127 CKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G + +A +L++ M E N+VTF+ LI +CK+ L +AL+ +E+ G P V
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V ++ C +GR+ A E++ +EME K P+V TY+ +
Sbjct: 364 VCYNALINGYCKLGRMDLARELI-------------------REMEAKRVKPDVVTYSTI 404
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM----- 297
IS YC+ G LDSA + M G+ + +TY +LIRGLC R++D ++ + M
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464
Query: 298 ------------EDSKEGS--------------------------------KGRISPYNS 313
KEG+ R +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524
Query: 314 VLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+L+ LY E+ + ++Y M K ++V LK GFC+ G +++A + + M++
Sbjct: 525 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK--GFCMKGLMKEADKVYQSMLDR 582
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
+ +Y LIH +C+ VR+A K+M G+ P +++ +++ GL +G V A
Sbjct: 583 NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Query: 431 LKLVEE 436
+++
Sbjct: 643 DNAIQD 648
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 240/461 (52%), Gaps = 32/461 (6%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ +N++L L + AR F M+ GV + YTY IL++ LC R+ +
Sbjct: 115 APSVPAYNAVLLALSDASLPSARRFL-SSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAY 157
++ M+ G PN+V YNTL+ + C+ G++ A ++S M E PN VTF+ ++
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGL 233
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK + A + ++ G PDVV+ +L C VG + +++ + E
Sbjct: 234 CKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE---------- 283
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
M ++G +P+V T+ LI + C+ G L+ A+ + M+ G+ N VT+ L
Sbjct: 284 ---------MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-- 335
I G C G +DD L L + E K G + + YN+++ G + + D A E +++ME
Sbjct: 335 IDGFCKKGFLDDAL--LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
++ P V S I G+C GN++ A + +M+++G +P+ + Y LI C+E+R+ +A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL + M G P T+ T++ G C++GNV AL L +E +R +G LP YS L
Sbjct: 453 CELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR---KGVLPDVVTYSVL 509
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I L + + A LL ++ + +PD + +++L++C S+
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSK 550
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 37/311 (11%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
RFL M R G PNV TYNIL+ + C G L+ A+ V DM+ G + N VTY+TL+
Sbjct: 138 RFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAF 197
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFP 339
C G +D +++ LM + + +K + +NS++ GL + + + A + +M E L P
Sbjct: 198 CRAGELDGAERVVSLMRE-EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP 256
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
V + + G+C G + ++ F +M + G VP+VV + LIHA C+ + +A L+
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG------------------- 440
+M G TF ++ G C++G + AL VEE MR
Sbjct: 317 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEE-MRKCGIQPSVVCYNALINGYCK 375
Query: 441 IGRGSL--------------PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+GR L P YS +I C+ G SA L +M+ KG+LPD +T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 487 WNSLLICLSQQ 497
++SL+ L ++
Sbjct: 436 YSSLIRGLCEE 446
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 204/485 (42%), Gaps = 111/485 (22%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLV-SRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P+ + T++ RA ++ + L+ N P+L FNS+++ L K ++ AR
Sbjct: 185 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 244
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +M+ G+ D +Y L+ G C + + + M RG+ P+ V + +LIH+
Sbjct: 245 VF-DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 303
Query: 127 CKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G + +A +L++ M E N+VTF+ LI +CK+ L +AL+ +E+ G P V
Sbjct: 304 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 363
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V ++ C +GR+ A E++ +EME K P+V TY+ +
Sbjct: 364 VCYNALINGYCKLGRMDLARELI-------------------REMEAKRVKPDVVTYSTI 404
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI------LQL 296
IS YC+ G LDSA + M G+ + +TY +LIRGLC R++D ++ L +
Sbjct: 405 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464
Query: 297 MEDS-----------KEGS--------------------------------KGRISPYNS 313
D KEG+ R +
Sbjct: 465 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 524
Query: 314 VLYGLYRENQQDEALEY---------------------------LKQMEKLFPRAVDRSL 346
+L+ LY E+ + ++Y +K+ +K++ +DR+
Sbjct: 525 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNW 584
Query: 347 K---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
K I G C GNV A QM+ G PN L+ +E V EA
Sbjct: 585 KLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADN 644
Query: 398 LMKEM 402
++++
Sbjct: 645 AIQDL 649
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 252/501 (50%), Gaps = 25/501 (4%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES+FI +++ GRA + + D+ + P+ K +N +LD+LV + A
Sbjct: 137 ESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVF 196
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M++ GV YT+ ++MK LC+ N V + LL M G PNSV+Y TLIH+L K
Sbjct: 197 YEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKR 256
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M P+ TF+ +I C+ + L+++ GF P+ +T
Sbjct: 257 DRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITY 316
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRL-------GKVKGG------CRFLKEMERKGC 232
++ LC VG+V +A +L + + G VK G +M + GC
Sbjct: 317 GVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGC 376
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+V T+N LI C+ G++ SA+D+ NDM +G + N +TY TL+ G C ++++
Sbjct: 377 RPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGY 436
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+L E S +G + I YN +L L + + +AL+ L +M + P + I G
Sbjct: 437 VLN--EMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFG 494
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C EDA + M+ +G + N V Y+ LIHA+ + ++EA +L+ +M G
Sbjct: 495 LCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLD 554
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+N ++ C+ G AL L +E +R + +P + + LI LC G +A
Sbjct: 555 EITYNGLIKAFCKLGATEKALGLFDEMVR---KDLVPSNISCNLLINGLCRVGKVCNALE 611
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
LL M+ +G+ PD +T+NSL+
Sbjct: 612 LLRDMIHRGLAPDVVTYNSLI 632
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 227/515 (44%), Gaps = 93/515 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T+I L + +N+ +K + + P + FN ++ L + + A
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH----------------------- 105
+M+ G +D TY +LM GLC +V + LL+
Sbjct: 301 VDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRL 360
Query: 106 ---------VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
M G +P+ +NTLIH LCK G +G A +++DM PN +T++
Sbjct: 361 DEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTT 420
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L+ +CK+ L A +L + + GF +++ +L LC G+V A+++
Sbjct: 421 LLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDM-------- 472
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
L EM KGC P++ T+N LI C+ + AL ++ DM +DG+ N V
Sbjct: 473 -----------LGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTV 521
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY+TLI GG I + LK++ M L+R DE
Sbjct: 522 TYNTLIHAFLRGGAIQEALKLVNDM--------------------LFRGCPLDE------ 555
Query: 333 QMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ + I FC G E A FD+M+ + VP+ + + LI+ C+ +V
Sbjct: 556 ---------ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKV 606
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
A EL+++M G P T+N++++GLC+ GN+ A L + G P + Y
Sbjct: 607 CNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQ---AEGIQPDAITY 663
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+ LI C G F A +LL++ V +P+ +TW
Sbjct: 664 NTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTW 698
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 213/506 (42%), Gaps = 93/506 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLV---SRFNMTPSLKIFNSILDVLVKEDIDLAR 65
P F V++ L M+N+V A L+ ++ P+ ++ +++ L K D
Sbjct: 206 PTVYTFGVVMKALC---MVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEA 262
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
++M G D T+ ++ GLC NR+ +G KL+ M RG PN + Y L++
Sbjct: 263 LKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNG 322
Query: 126 LCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKS----------FS 175
LC+ GKV A+ L++ + PNDV F+ILI Y K L A L F+
Sbjct: 323 LCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFT 382
Query: 176 F--------------------------GFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F G P+++T T +L+ C ++ +A +L E
Sbjct: 383 FNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMS 442
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+G + GKV L EM KGC P++ T+N LI C+ +
Sbjct: 443 AKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKE 502
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-----EDSKEGSKGRI 308
AL ++ DM +DG+ N VTY+TLI GG I + LK++ M + G I
Sbjct: 503 DALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLI 562
Query: 309 SPY----------------------------NSVLYGLYRENQQDEALEYLKQM--EKLF 338
+ N ++ GL R + ALE L+ M L
Sbjct: 563 KAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLA 622
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + I G C GN+ +A F+++ EG P+ + Y+ LI +C+ +A L
Sbjct: 623 PDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLL 682
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ + ++P T+ ++S ++
Sbjct: 683 LLRGVENAFIPNDVTWYILVSNFIKE 708
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 188/405 (46%), Gaps = 40/405 (9%)
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPN----DVTFSI 152
KLL +K G+ ++ ++ + G+A ++ DM+ EP +V I
Sbjct: 123 KLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDI 182
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L+ A C V A V E S G +P V T V++ LC V V +A
Sbjct: 183 LVSANCPS---VAANVFYEM-LSKGVIPTVYTFGVVMKALCMVNEVDNA----------- 227
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
C L++M + GC+PN Y LI + + ++ AL + +M + G +
Sbjct: 228 --------CSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVD 279
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
T++ +I GLC RI +G K++ M G Y ++ GL R + DEA L
Sbjct: 280 TFNDVIYGLCRLNRIHEGAKLVDRM--LFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLN 337
Query: 333 QMEKLFPRAVDRSLKILGFCVDGNVEDAKR-CFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
++ P V ++ I G+ G +++A +D+MI+ G P+V ++ LIH C++
Sbjct: 338 KVPT--PNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGL 395
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ A +++ +M+ +G P T+ T+L G C++ + A ++ E +G
Sbjct: 396 MGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMS---AKGFELNIMG 452
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y+ L++ALC+ G A +L +M KG PD T+N+L+ L +
Sbjct: 453 YNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCK 497
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 148/488 (30%), Positives = 245/488 (50%), Gaps = 32/488 (6%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE--DIDLARAFYR 69
++F +++ MI+ V +L P + +NS+LD +V+ + L+
Sbjct: 143 AVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVY 202
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ S V + YTY IL++G C + G M+ G PN V YNTLI + CK
Sbjct: 203 REMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKM 262
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G++ A L+ M +PN ++++++I C+E ++ A +LE+ GF PD VT
Sbjct: 263 GRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 322
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+L C G A+ I EM R G P+V TY LI+S
Sbjct: 323 NTLLNGYCKEGNFHQALVI-------------------HAEMVRNGVSPSVVTYTALINS 363
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ L+ A++ F+ M+I G+ N TY TLI G G +++ +IL M +S G
Sbjct: 364 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES--GFS 421
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ YN+ ++G + +EAL +++M EK L P V S I GFC G ++ A +
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+M+E+G P+ V Y LI C+ R+ EA +L +EM G P T+ T+++ C
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+G++ AL L +E I +G LP + YS LI L ++ + A LL +++ + +P
Sbjct: 542 EGDLNKALHLHDE---MIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 598
Query: 484 YLTWNSLL 491
+T+++L+
Sbjct: 599 DVTYDTLI 606
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 207/455 (45%), Gaps = 61/455 (13%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN-GKVGRA-----RS 137
+ +++K N + +++ KS G P + YN+++ ++ ++ G V + R
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204
Query: 138 LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
++ PN T++ILI +C L L + G +P+VVT +++ C +GR
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ +A +L K M KG PN+ +YN++I+ C G + A +
Sbjct: 265 IDEAFGLL-------------------KSMSSKGMQPNLISYNVIINGLCREGSMKEAWE 305
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ +M G + + VTY+TL+ G C G L I M + G + Y +++
Sbjct: 306 ILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM--VRNGVSPSVVTYTALINS 363
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPN 375
+ + + A+E+ QM R +R+ L GF G + +A R ++M E G P+
Sbjct: 364 MCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPS 423
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VV Y+ IH +C ER+ EA +++EM G P +++T++SG CR+G + A ++ +
Sbjct: 424 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 483
Query: 436 E---------------------DMRGIGR-----------GSLPGSGHYSPLIKALCEKG 463
E +MR + G P Y+ LI A C +G
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
A L +M+ KG LPD +T++ L+ L++Q
Sbjct: 544 DLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQA 578
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 188/399 (47%), Gaps = 56/399 (14%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC-SVGRVMDAVEI 204
+ F +++ +Y + A+ + + S GF+P V++ VL+ + S G V + E
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 205 LEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ + R+ G+++ G EMER GCLPNV TYN LI +YC
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------- 300
+ G +D A + M G+ N ++Y+ +I GLC G + + +IL+ M
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320
Query: 301 ----------KEGS------------KGRISP----YNSVLYGLYRENQQDEALEYLKQM 334
KEG+ + +SP Y +++ + + + A+E+ QM
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380
Query: 335 EKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
R +R+ L GF G + +A R ++M E G P+VV Y+ IH +C ER+
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
EA +++EM G P +++T++SG CR+G + A ++ +E + +G P + Y
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQE---MVEKGVSPDAVTY 497
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
S LI+ LCE A L +M+ G+ PD T+ +L+
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 536
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 267/544 (49%), Gaps = 66/544 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PPD + TVI GL + +++ + D + + P++ + +++D + D+D A
Sbjct: 111 PPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVE 170
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCL--------------------------------- 93
RK M G + + TY +M GLC
Sbjct: 171 LVRK-MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDS 229
Query: 94 ---TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PN 146
+ +V D +L+ M S+G PN V Y++L+H LCK GK+ A +L+ M PN
Sbjct: 230 LVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 289
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
VT++ +I +CK + A LLE+ G P+VVT T +L+ C G+ DA+ ++E
Sbjct: 290 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 349
Query: 207 ESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
E+G + +V+ C+ L M +KGC+PNV +YN +I+ C+
Sbjct: 350 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 409
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ + + M + + VT++T+I +C R+D ++ L+++S G +
Sbjct: 410 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES--GCTPNLVT 467
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YNS+++GL + + D+A L++M + P + + I G C V+ A + F QM
Sbjct: 468 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 527
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ +G P+ V Y +I + C+ + EA+ +++ M +G+ P A T+ T++ G C+ GN+
Sbjct: 528 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNL 587
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
AL++++ + +GS P +S I L ++G + A LL M+ G++PD +T+
Sbjct: 588 DKALEILQ---LLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTY 644
Query: 488 NSLL 491
N+LL
Sbjct: 645 NTLL 648
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 167/605 (27%), Positives = 283/605 (46%), Gaps = 64/605 (10%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S PPD + T+I GL ++ ++D ++ + + P++ +N++L K +
Sbjct: 37 SKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVE 96
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ ++M+ G D +Y ++ GLC ++V + +++ M RG +PN + Y TL+
Sbjct: 97 NALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLV 156
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
C+ G + A L+ M E PN +T++ ++ C L +AL L ++ G
Sbjct: 157 DGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSC 216
Query: 180 -PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PDV T + +++ L G+V DA CR ++ M KGC PNV T
Sbjct: 217 PPDVFTYSTIVDSLVKSGKVDDA-------------------CRLVEAMVSKGCSPNVVT 257
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y+ L+ C+ G LD A + M G S N VTY+T+I G C GRID+ +L+ M
Sbjct: 258 YSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 317
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGN 356
D G + + Y +L + + ++A+ ++ M EK + P + + FC
Sbjct: 318 DG--GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDE 375
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VE A + MI++G VPNVV Y+ +I C+ +V E L+++M + +P TFNT
Sbjct: 376 VERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNT 435
Query: 417 VLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ +C+ V A L++E G P Y+ L+ LC+ F A LL
Sbjct: 436 IIDAMCKTYRVDIAYELFNLIQES------GCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 489
Query: 474 QMVGK-GILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM--------VSFVMVVHELSAK 522
+M K G PD +T+N+++ +C S++ L L + V++ +V+ L
Sbjct: 490 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL--- 546
Query: 523 EKRCKLRSLNH--------LAHG--AGSVWLGLRIHDTTHTFIIDRRVEIGHVFCSSSSL 572
CK R ++ L +G G++ G I T +D+ +EI + S S
Sbjct: 547 ---CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSY 603
Query: 573 KDVDT 577
DV T
Sbjct: 604 PDVVT 608
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 229/452 (50%), Gaps = 41/452 (9%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK-SRGVKPNSVIYNTLIHSLCKNG 130
M G++ + +++GLC + D +LH + S+ P+SV YNT+I+ L K+
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDA--VLHFREMSKTCPPDSVTYNTMINGLSKSD 58
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L+ +M + PN +++ ++ +CK + NAL LLE+ G PDVV+ T
Sbjct: 59 RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
V+ LC +L +V CR + +M ++GC PNV TY L+ +
Sbjct: 119 TVINGLC-------------------KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 159
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G LD A+++ M G N +TY+ ++ GLCSG ++D L++ + ME+S G
Sbjct: 160 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES-----G 214
Query: 307 RISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
P Y++++ L + + D+A ++ M + P V S + G C G +++A
Sbjct: 215 SCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+M G PN+V Y+ +I +C+ R+ EA L++EM G P T+ +L
Sbjct: 275 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 334
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C+ G A+ LVE + +G +P Y+ L+ C+K + A LL M+ KG
Sbjct: 335 FCKCGKAEDAIGLVE---VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 391
Query: 481 LPDYLTWNSLLICLSQQT-TWLLLLLLNEMVS 511
+P+ +++N+++ L + T +LLL +M+S
Sbjct: 392 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 243/517 (47%), Gaps = 64/517 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
P+ + ++ GL R ++ ++ ++ + P + +++I+D LVK +D A
Sbjct: 182 PNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACR 241
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M++ G + TY+ L+ GLC ++ + LL M G PN V YNT+I
Sbjct: 242 LV-EAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGH 300
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G++ A L+ +M +PN VT+++L+ A+CK +A+ L+E G+VP++
Sbjct: 301 CKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNL 360
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
T +L++ C V A ++L ++G + KV G L++
Sbjct: 361 FTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ 420
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M C+P++ T+N +I + C+T +D A ++FN ++ G + N VTY++L+ GLC R
Sbjct: 421 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRR 480
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFP----- 339
D +L+ M K+G I YN+V+ GL + + D A + QM + L P
Sbjct: 481 FDQAEYLLREMT-RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 539
Query: 340 ----------RAVDRSLKIL--------------------GFCVDGNVEDAKRCFDQMIE 369
R +D + +L GFC GN++ A ++
Sbjct: 540 SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 599
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G P+VV + I + R+R+A EL++ M G +P T+NT+L G C
Sbjct: 600 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTED 659
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
A+ L E MR G P + Y+ L+ L +K ++
Sbjct: 660 AVDLFEV-MRQC--GCEPDNATYTTLVGHLVDKKSYK 693
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 260/507 (51%), Gaps = 29/507 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ F +I GL RA I + + R + ++ + N ++ L +D A
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++ + D +TY+ ++ L + +V D +L+ M S+G PN V Y++L+H LC
Sbjct: 935 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A +L+ M PN VT++ +I +CK + A LLE+ G P+VV
Sbjct: 995 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +L+ C G+ DA+ ++E E+G + +V+ C+ L M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+KGC+PNV +YN +I+ C+ + + + M + + VT++T+I +C R+
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDR 344
D ++ L+++S G + YNS+++GL + + D+A L++M + P +
Sbjct: 1175 DIAYELFNLIQES--GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C V+ A + F QM+ +G P+ V Y +I + C+ + EA+ +++ M
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G+ P A T+ T++ G C+ GN+ AL++++ + +GS P +S I L ++G
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQ---LLLSKGSYPDVVTFSIFIDWLSKRGR 1349
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A LL M+ G++PD +T+N+LL
Sbjct: 1350 LRQAGELLETMLRAGLVPDTVTYNTLL 1376
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 250/514 (48%), Gaps = 41/514 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + T+I GL ++ ++D ++ + + P++ +N++L K + +
Sbjct: 227 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALW 286
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ G D +Y ++ GLC ++V + +++ M RG +PN + Y TL+ C
Sbjct: 287 LLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFC 346
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + A L+ M E PN +T++ ++ +C+ ++ A +L+ G PD +
Sbjct: 347 RVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAI 406
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ C G++ +A ++LE+ M R+GC P+V + LI
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQ-------------------MIRRGCRPDVACLSTLI 447
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ +DSA ++ + + V Y LI LC R+ + L +M
Sbjct: 448 DALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVM------ 501
Query: 304 SKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K R P YNSV+ GL + + ++A +M + P V S+ I FC D N+
Sbjct: 502 VKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNL 561
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A + ++M E VP+VV Y LI+ C+ V +A ++ +EM G G P T+NT+
Sbjct: 562 DSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTL 621
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ GLC+ V A +++E MR + P S Y+ LI LC + A +L +M
Sbjct: 622 IDGLCKINKVEQAAEMLEI-MR--KQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKD 678
Query: 478 KGILPDYLTWNSLLICLSQQTTWLLLL--LLNEM 509
KG LPD +T+ +LL L Q+T L L+ LL EM
Sbjct: 679 KGCLPDRMTYGTLLRAL-QKTNNLELVEQLLKEM 711
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 143/518 (27%), Positives = 245/518 (47%), Gaps = 64/518 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
P + + VI+GL AR ++ ++ ++ + P + +++I+D LVK +D A
Sbjct: 909 PQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 968
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ M++ G + TY+ L+ GLC ++ + LL M G PN V YNT+I
Sbjct: 969 RLV-EDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 1027
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK G++ A L+ +M +PN VT+++L+ A+CK +A+ L+E G+VP+
Sbjct: 1028 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 1087
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
+ T +L++ C V A ++L ++G + KV G L+
Sbjct: 1088 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 1147
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M C+P++ T+N +I + C+T +D A ++FN ++ G + N VTY++L+ GLC
Sbjct: 1148 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 1207
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFP---- 339
R D +L+ M K+G I YN+V+ GL + + D A + QM + L P
Sbjct: 1208 RFDQAEYLLREMT-RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVT 1266
Query: 340 -----------RAVDRSLKIL--------------------GFCVDGNVEDAKRCFDQMI 368
R +D + +L GFC GN++ A ++
Sbjct: 1267 YSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLL 1326
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+G P+VV + I + R+R+A EL++ M G +P T+NT+L G C
Sbjct: 1327 SKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTE 1386
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
A+ L E MR G P + Y+ L+ L +K ++
Sbjct: 1387 DAVDLFEV-MRQC--GCEPDNATYTTLVGHLVDKKSYK 1421
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 220/464 (47%), Gaps = 28/464 (6%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N +L+VLVK A +R ++ GD TY+ L+ G ++ ++L M
Sbjct: 130 NCLLNVLVKAHQYSQAHDLFRSRIEGQW-GGDTVTYSTLISGFIRAGKILPAYELFDEMN 188
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVN 165
+G+K ++ ++ +++ LC G+ A +M + P+ VT++ +I K + L +
Sbjct: 189 RKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDD 248
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------- 212
A+ LLE+ GF P+V + VL C RV +A+ +LE+ +G
Sbjct: 249 AIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVIN 308
Query: 213 ---RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+L +V CR + +M ++GC PNV TY L+ +C G LD A+++ M G
Sbjct: 309 GLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRP 368
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N +TY+ ++ C ++ ++LQ+M + G Y++++ G + + EA +
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMM--IQTGCPPDAINYSTIISGFCKAGKLREAHD 426
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L+QM + P S I C ++ A+ I P+VV Y LIHA C
Sbjct: 427 LLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALC 486
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ +R+ EA + M + P T+N+V+ GLC+ + A L + MR G +P
Sbjct: 487 KAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDR-MRAA--GVMP 543
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS +I + C+ SA +L +M +PD +T+++L+
Sbjct: 544 DVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALI 587
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 249/548 (45%), Gaps = 68/548 (12%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYN 120
D A F+ G D YT L++ L R D L V +++ PN +
Sbjct: 825 DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDA---LQVYRNKLCCSPNMFTFT 881
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE---PNDVTF-SILICAYCKEENLVNALVLLEKSFSF 176
LIH LC+ G +G A L+ +M P +V +++I C L +AL L ++
Sbjct: 882 ILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEES 941
Query: 177 GFVP-DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G P DV T + +++ L G+V DA CR +++M KGC PN
Sbjct: 942 GSCPPDVFTYSTIVDSLVKSGKVDDA-------------------CRLVEDMVSKGCSPN 982
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY+ L+ C+ G LD A + M G S N VTY+T+I G C GRID+ +L+
Sbjct: 983 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 1042
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCV 353
M D G + + Y +L + + ++A+ ++ M EK + P + + FC
Sbjct: 1043 EMVDG--GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 1100
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
VE A + MI++G VPNVV Y+ +I C+ +V E L+++M + +P T
Sbjct: 1101 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 1160
Query: 414 FNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
FNT++ +C+ V A L++E G P Y+ L+ LC+ F A
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQES------GCTPNLVTYNSLVHGLCKSRRFDQAEY 1214
Query: 471 LLVQMVGK-GILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM--------VSFVMVVHEL 519
LL +M K G PD +T+N+++ +C S++ L L + V++ +V+ L
Sbjct: 1215 LLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSL 1274
Query: 520 SAKEKRCKLRSLNH--------LAHG--AGSVWLGLRIHDTTHTFIIDRRVEIGHVFCSS 569
CK R ++ L +G G++ G I T +D+ +EI + S
Sbjct: 1275 ------CKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 1328
Query: 570 SSLKDVDT 577
S DV T
Sbjct: 1329 GSYPDVVT 1336
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 153/319 (47%), Gaps = 26/319 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
PPD + T+I G +A + + + + R P + ++++D L K ID A+
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461
Query: 67 FYRKKMMASGVQ--GDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R M+ G+ D Y+IL+ LC R+ + L VM P+ V YN+++
Sbjct: 462 LLR---MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVD 518
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK+ ++ A L M P+ VT+SI+I ++CK+ NL +A +LE+ VP
Sbjct: 519 GLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVP 578
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT + ++ LC G V A ++ +E G ++ KV+ L
Sbjct: 579 DVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEML 638
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ M ++ C P+ TY LI+ C L+ A V +MK G + +TY TL+R L
Sbjct: 639 EIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKT 698
Query: 285 GRIDDGLKILQLMEDSKEG 303
++ ++L+ ME ++EG
Sbjct: 699 NNLELVEQLLKEMEATEEG 717
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 121/291 (41%), Gaps = 35/291 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD+ + VI L + R +++ +L+ + P + +++D K ++D A
Sbjct: 1262 PDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEI 1321
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +++ G D T++I + L R+ +LL M G+ P++V YNTL+ C
Sbjct: 1322 L-QLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFC 1380
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF--------- 174
A L M EP++ T++ L+ +++ + L + KS
Sbjct: 1381 DASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNH 1440
Query: 175 --------SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--GKVKGGCRFL 224
S DV ++++ G DA ++ E ++ + + G F
Sbjct: 1441 ELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFH 1500
Query: 225 KEMER----------KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
K+ E+ +G P+ T+ L++ C G+LD+A+D F + D
Sbjct: 1501 KQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRD 1551
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 113/320 (35%), Gaps = 74/320 (23%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + T+I G + ++ ++ L+ P + F+ +D L K
Sbjct: 1297 PGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGEL 1356
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI----- 123
+ M+ +G+ D TY L+KG C + D L VM+ G +P++ Y TL+
Sbjct: 1357 LETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVD 1416
Query: 124 -----------------------HSLCKN---------------------GKVGR---AR 136
H L GK G AR
Sbjct: 1417 KKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDAR 1476
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
+ M++ N V +S ++ Y + A L G PD VT +L + C G
Sbjct: 1477 KVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAG 1536
Query: 197 RVMDA-----VEILEESGEQ-------------GRLGKVKGGCRFLKEMERKGCLPNVDT 238
++DA V I + G + GRLG V + M C P+ T
Sbjct: 1537 -LLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMP---CKPSAAT 1592
Query: 239 YNILISSYCETGVLDSALDV 258
+N L+S+Y G + AL V
Sbjct: 1593 WNCLLSAYKICGDFERALRV 1612
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/485 (29%), Positives = 247/485 (50%), Gaps = 30/485 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+++ L RA + V + +S + P F +++ V+E A
Sbjct: 183 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRV 242
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +M+ G T +L+ G C RV D + + G +P+ + YNT ++ LC+
Sbjct: 243 KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQ 302
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG VG A +M M +P+ T++I++ CK L A +L + G +PD+ T
Sbjct: 303 NGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITT 362
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LCS R+ +A+++ +++ KG P+V T+NILI+
Sbjct: 363 FNTLIVALCSGNRLEEALDLA-------------------RQVTLKGLSPDVYTFNILIN 403
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ G AL +F +MK G + + VTY+TLI LCS G++ L +L+ ME + G
Sbjct: 404 ALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESA--GC 461
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YN+++ GL ++ + +EA E QM + + A+ + I G C D ++DA +
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
QMI EG PN + Y+ ++ YC++ +++A+++++ MT +G+ T+ T+++GLC
Sbjct: 522 LISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLC 581
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ G ALKL+ MR G + P + Y+P+I++L + + A L +M G P
Sbjct: 582 KAGRTQVALKLL-RGMRIKGMRATPKA--YNPVIQSLFRRNNTRDAMNLFREMTEVGEPP 638
Query: 483 DYLTW 487
D T+
Sbjct: 639 DAFTY 643
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/477 (28%), Positives = 214/477 (44%), Gaps = 26/477 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PDE+ F T+++G I ++ + +P+ N +++ K Y
Sbjct: 218 PDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGY 277
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ +A+G + D TY + GLC VG K++ VM G P+ YN +++ LCK
Sbjct: 278 IQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 337
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG++ A+ +++ M E P+ TF+ LI A C L AL L + G PDV T
Sbjct: 338 NGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYT 397
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC VG A+ + EE G LGK+ LKEME
Sbjct: 398 FNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEME 457
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC + TYN +I C+ ++ A +VF+ M + GIS N +T++TLI GLC RID
Sbjct: 458 SAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRID 517
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
D +++ M EG + YNS+L ++ +A + L+ M V
Sbjct: 518 DANQLISQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G + A + M +G Y+ +I + + R+A L +EMT G
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
P A T+ V GLCR G G+ + + + + +G +P + L + L G
Sbjct: 636 EPPDAFTYKIVFRGLCRGG--GSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 145/278 (52%), Gaps = 13/278 (4%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFNDM-KIDGISWNFVTYDTLIRG 280
+ EM R+G V + + SY + A+D V N + + GI + V Y+ L+
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNV 159
Query: 281 LCSGGRIDDGLKILQLM--EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
L G + +K+L+ + E + G K + +N+++ L R +Q A+ L++M
Sbjct: 160 LVEGSK----MKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + + GF +G+++ A R +M+E G P V + LI+ YC+ RV +A
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+++ +G+ P T+NT ++GLC+ G+VG ALK+++ + G P Y+ ++
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMD---VMVQEGHDPDVFTYNIVV 332
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
LC+ G + A +L QMV +G LPD T+N+L++ L
Sbjct: 333 NCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVAL 370
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 130/276 (47%), Gaps = 8/276 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++ E + V+++M GI + VT++TL++ LC ++ +L L E
Sbjct: 153 YNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA--VLMLEE 210
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGN 356
S G + + +++ G E AL +M ++ P V ++ I G+C G
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGR 270
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VEDA Q I G P+ + Y+ ++ CQ V A ++M M G+ P T+N
Sbjct: 271 VEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNI 330
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V++ LC+ G + A ++ + + RG LP ++ LI ALC + A L Q+
Sbjct: 331 VVNCLCKNGQLEEAKGILNQ---MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVT 387
Query: 477 GKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEMVS 511
KG+ PD T+N L+ L + L L L EM S
Sbjct: 388 LKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS 423
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 9/260 (3%)
Query: 242 LISSYCETGVLDSALDVFND-MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+++ E D+AL + N + + + Y+ +IR L + D +K+L + E
Sbjct: 47 LLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVL-VTEMR 105
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEY-LKQMEKLFPRAVDRSL--KILGFCVDGN- 356
+EG + R+ +S L R+ +A++ L Q++ LF D + +L V+G+
Sbjct: 106 REGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSK 165
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ + + +M E G P+VV ++ L+ A C+ +VR A +++EM+ G P +TF T
Sbjct: 166 MKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTT 225
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G +G++ AL++ R + G P + LI C+ G + A + Q +
Sbjct: 226 LMQGFVEEGSIKAALRV---KARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282
Query: 477 GKGILPDYLTWNSLLICLSQ 496
G PD +T+N+ + L Q
Sbjct: 283 ANGFEPDQITYNTFVNGLCQ 302
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 24/256 (9%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-I 61
S P + T+I GL + I + + D + ++ + FN+++D L K+ I
Sbjct: 457 ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRI 516
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A +M++ G+Q ++ TY ++ C + +L M + G + + V Y T
Sbjct: 517 DDANQLI-SQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI+ LCK G+ A L+ M ++ +I + + N +A+ L + G
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVG 635
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD T V LC G G ++ FL EM KG +P
Sbjct: 636 EPPDAFTYKIVFRGLCRGG------------------GSIREAFDFLLEMVDKGFIPEFS 677
Query: 238 TYNILISSYCETGVLD 253
++ +L G+ D
Sbjct: 678 SFRMLAEGLLNLGMDD 693
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 242/493 (49%), Gaps = 41/493 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVK-EDIDLA 64
P+ + VI+GL ++ D+ KA +L+ + P I+N ++ L K + A
Sbjct: 57 PNVFTYAVVIQGLCKS---GDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA 113
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
++R V T+ I++ GLC NR+ + MK +G PN YN LI+
Sbjct: 114 LDYFRSMECEKNV----ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLIN 169
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK KV RA L+ +M+E PN VT+S +I +C++ + A L + G +P
Sbjct: 170 GFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP 229
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
++VT +L LC G + +A E+L+E M +G P+ +Y+
Sbjct: 230 NLVTYNTLLSGLCRNGLMDEAYELLDE-------------------MRERGLQPDKFSYD 270
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L++ C+TG +D AL VF D + V Y TLI GLC GR+D+ K+ + M ++
Sbjct: 271 TLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMREN 330
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVE 358
+ + + +++ GL + ++ EA + L+ ME P + S I G C G V
Sbjct: 331 --SCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA+ F +MI G PNVV Y+ LIH +C V A LM+EMT G LP T+NT++
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GLC+ G A +L DM+ + P YS LI C+ A L M+ +
Sbjct: 449 DGLCKTGRAPEANRLF-GDMK--AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505
Query: 479 GILPDYLTWNSLL 491
+LPD +T+++L+
Sbjct: 506 AVLPDVVTFSTLV 518
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 218/454 (48%), Gaps = 30/454 (6%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D D A F+ G + YTY L + L R+ + +L G+ PN Y
Sbjct: 3 DPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY 62
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+I LCK+G + +A L+ +M E P+ ++ +I A CK N AL S
Sbjct: 63 AVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFR---S 119
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR------ 222
+V+T T +++ LC R+ +A + ++G + + G C+
Sbjct: 120 MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 179
Query: 223 ---FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
LKEM+ G PNV TY+ +I +C +D+A +F M +G N VTY+TL+
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 239
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC G +D+ ++L M + G + Y++++ GL + + D AL+ +
Sbjct: 240 GLCRNGLMDEAYELLDEMRE--RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDC 297
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S I G C G +++A + F++M E P+VV + L+ C+ +R++EA +
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQ 357
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+++ M P T+++++ GLC+ G V A ++ + R I RG P Y+ LI
Sbjct: 358 VLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK---RMIVRGIEPNVVTYNSLIH 414
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C G SA +L+ +M G LPD +T+N+L+
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 26/510 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + TVI G R ++ K + P+L +N++L L + +
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G+Q D ++Y LM GLC T ++ K+ + P+ V Y+TLI LCK
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 313
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L M E P+ VTF+ L+ CK + L A +LE P+V+T
Sbjct: 314 AGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 373
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEME 228
+ +++ LC G+V DA E+ + +G V G C ++EM
Sbjct: 374 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 433
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GCLP++ TYN LI C+TG A +F DMK + + +TY LI G C RID
Sbjct: 434 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 493
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ M K+ + +++++ G D+A L++M P +
Sbjct: 494 MARTLFDDM--LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ GFC G + +A+R +M + G PNVV Y LI A+C+ + A L++EM G+G
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ +++ G C G++ A K++E R Y ++ LC G
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLER--DENCKADMFAYRVMMDGLCRTGRMS 669
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+A LL + G P + + +L+ L Q
Sbjct: 670 AALELLEAIKQSGTPPRHDIYVALIRGLCQ 699
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 206/451 (45%), Gaps = 59/451 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDIDLARA 66
PD F ++ GL + + + + + + N TP++ ++S++D L K + D
Sbjct: 334 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F K+M+ G++ + TY L+ G C+TN V L+ M + G P+ + YNTLI L
Sbjct: 394 F--KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 451
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+ A L DM+ P+ +T+S LI +CK E + A L + +PDV
Sbjct: 452 CKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV 511
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT + ++E C+ G V DA +LEE ++G++ R LK
Sbjct: 512 VTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 571
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M ++GC PNV TY LI ++C G A + +M +G+ N +TY +LI G C G
Sbjct: 572 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGD 631
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+++ KIL+ +E E K + Y ++ GL R + ALE L+ ++
Sbjct: 632 LEEARKILERLE-RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIK----------- 679
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT-GH 405
+ G P IY LI CQ + + +A E+++EMT
Sbjct: 680 ----------------------QSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 717
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P A + V+ L R+G A L +E
Sbjct: 718 KSRPNAEAYEAVIQELAREGRHEEANALADE 748
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/421 (31%), Positives = 217/421 (51%), Gaps = 33/421 (7%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V D +TY IL+ GLC ++ ++LH M RGV P++V +N+++ LCK GK RA
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
SL++ M E P+ T++ LI CK++N+ A L+++ S GFVPDVVT + + + L
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C GR+ +A E+ +KEM GC PN+ TYN LI C+
Sbjct: 126 CKRGRIDEAFEL-------------------VKEMSGNGCTPNLVTYNTLIDGLCKASKT 166
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A ++ + G + VTY ++ GLC GR+D LK+++ M K G + Y
Sbjct: 167 EKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM--LKRGCTPSVITYT 224
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++ GL R + DEA K+M + A+ + G+C ++A++ D +
Sbjct: 225 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--- 281
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G P + +Y+ L+ YC+E R+ E + ++M G +P T+N V+ GLC+ G V A
Sbjct: 282 RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+E G +P Y+ +I L + + A +L QM+ GI PD +T+N+L
Sbjct: 342 FPFLESMHSA---GCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398
Query: 491 L 491
+
Sbjct: 399 M 399
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 165/563 (29%), Positives = 268/563 (47%), Gaps = 53/563 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +++ GL +A +++ N PS +N+++ L K+ ++D A+
Sbjct: 43 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTL 102
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++SG D TY+IL GLC R+ + F+L+ M G PN V YNTLI LC
Sbjct: 103 V-DEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLC 161
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K +A L+ + P+ VT++I++ CKE L AL ++E G P V+
Sbjct: 162 KASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVI 221
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++E LC GRV +A I KEM K C + Y L+
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIF-------------------KEMVSKDCTADALAYVSLV 262
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWN--FVTYDTLIRGLCSGGRIDDGLKILQLMED-S 300
+ YC++ A V +DGI Y+ L+ G C GR+D+ I + ED +
Sbjct: 263 NGYCKSSRTKEAQKV-----VDGIRGTPYIDVYNALMDGYCKEGRLDE---IPNVFEDMA 314
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
G I YN V+ GL + + DEA +L+ M P V ++ I G +
Sbjct: 315 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPK 374
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A++ DQMI+ G P+ V Y+ L+ +C+EER +A ++K M G P T+NT++
Sbjct: 375 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 434
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
SGL + +G A +L+ E +R + Y+ +I LC++G + A +L+ M G
Sbjct: 435 SGLSQTNRLGDAYELMHEMLR--NGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492
Query: 479 GILPDYLTWNSLL--IC----LSQQTTWLLLL-LLNEMVSFVMVVHELSAKEKRCKLRSL 531
G+ + +T+N + +C L + ++ L + L + VS+ V+ L CK L
Sbjct: 493 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGL------CKAEQL 546
Query: 532 NHLAHGAGSVWLGLRIHDTTHTF 554
+ + A + + T+HTF
Sbjct: 547 DRASKLAREMVAVKGLCITSHTF 569
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 210/437 (48%), Gaps = 39/437 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAF 67
D +++++ G ++ + K D + TP + ++N+++D KE ++ F
Sbjct: 254 DALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVF 310
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G + TY I+M GLC +V + F L M S G P+ V YN +I L
Sbjct: 311 --EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K AR ++ M + P+ VT++ L+ +CKEE +A+ +L+ G PD V
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 428
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV-DTYNIL 242
T ++ L R+ DA E++ E M R GC+ + TYN +
Sbjct: 429 TYNTLISGLSQTNRLGDAYELMHE-------------------MLRNGCVVSACTTYNTI 469
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C+ G L AL + + M G+ N VTY+ I LC GR+D+ +L M+ ++
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 529
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVED 359
+S Y +V+ GL + Q D A + ++M + L + +L I F +++
Sbjct: 530 ----EVS-YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 584
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + M++ G P+V+ Y+ +I C+ ++V +A EL EM G + + ++ ++
Sbjct: 585 ALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 644
Query: 420 GLCRQGNVGTALKLVEE 436
GLC QG AL+++EE
Sbjct: 645 GLCGQGRGKEALQVLEE 661
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/578 (24%), Positives = 240/578 (41%), Gaps = 65/578 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + GL + I++ + +S TP+L +N+++D L K
Sbjct: 113 PDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL 172
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +++SG D TY I++ GLC R+ K++ M RG P+ + Y L+ LC+
Sbjct: 173 LETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCR 232
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V A + +M + + + L+ YCK A +++ P +
Sbjct: 233 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD---GIRGTPYIDV 289
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ C GR+ + + E+ +G + GKV FL+ M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC+P+V +YNI+I + A V + M GI + VTY+TL+ C R D
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRS 345
D + IL+ M K G YN+++ GL + N+ +A E + +M + + +
Sbjct: 410 DAVGILKNM--IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I C +G ++ A D M G N V Y+ I C+E R+ EAS L+ EM
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM--- 524
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRG----------------------- 440
L ++ TV+ GLC+ + A KL E ++G
Sbjct: 525 DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDE 584
Query: 441 --------IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ RG P Y+ +I LC+ A L +M +GI+ +++ L+
Sbjct: 585 ALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIY 644
Query: 493 CLSQQTTWL-LLLLLNEMVSFVMVVHELSAKEKRCKLR 529
L Q L +L EM S + +L ++ LR
Sbjct: 645 GLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALR 682
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 139/276 (50%), Gaps = 9/276 (3%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M + P+V TYNILI C+ D A ++ ++M G++ + VT+++++ GLC G+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ +L +M ++ + YN+++ GL ++ D A + + P V
Sbjct: 61 FERAHSLLAVM--AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTY 118
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ G C G +++A +M G PN+V Y+ LI C+ + +A EL++ +
Sbjct: 119 SILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVS 178
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G++P T+ ++ GLC++G + ALK+VE ++ RG P Y+ L++ LC G
Sbjct: 179 SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK---RGCTPSVITYTALMEGLCRTGR 235
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
A + +MV K D L + SL+ C S +T
Sbjct: 236 VDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRT 271
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 45/363 (12%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
HS PD + +I GL +A + + D + + + P +N+++ KE+
Sbjct: 349 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNT 121
K M+ +GV D+ TY L+ GL TNR+GD ++L+H M G V YNT
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 468
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I LCK G + +A LM M E N VT++I I CKE L A LL +
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE---MD 525
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC---------------- 221
+ D V+ T V+ LC ++ A ++ E + VKG C
Sbjct: 526 TLRDEVSYTTVIIGLCKAEQLDRASKLARE------MVAVKGLCITSHTFNLLIDAFTKT 579
Query: 222 -------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
L+ M ++GC P+V TYN++I+ C+ +D A ++F++M + GI + V+Y
Sbjct: 580 KRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 639
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSK---EGSKGRISPYNSVLYGLYRENQQDEALEYL 331
LI GLC GR + L++L+ M S + K R + L + + +EA E L
Sbjct: 640 TVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCR-----KLYLALRGQGRGEEAAELL 694
Query: 332 KQM 334
++M
Sbjct: 695 RRM 697
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 243/514 (47%), Gaps = 38/514 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL--VKEDIDLARA 66
PD + ++RG R I+ + D + N+ P++ + + ++D L K ID R
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + M SG+ D Y L+ GL R+ +LH M+ G +PN V YN+LI L
Sbjct: 67 F--RAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEK-------SFS 175
CKN + RA+ L M+ P+ VT++ L+ + L A+ L ++
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
P+V+T + +++ LC RV AVE+LE +G + KV
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAA 244
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
L+EM GC+PN+ TYN L+ C + AL + DM G + N VTY TLI
Sbjct: 245 AWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC GR+ D +L M D +G + YN ++ GL + +Q DE++ L++ +
Sbjct: 305 GLCKVGRVKDACAMLADMID--KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 362
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S I G C +++A R + G P+V++Y LI C+ +V EA +
Sbjct: 363 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFD 422
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L + M G G T++T++ GLC+ G V A L+ R + G+ P + Y+ LIK
Sbjct: 423 LYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLA---RMVRMGTPPSTMTYNSLIK 479
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ A L+ +M P +T+N L+
Sbjct: 480 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 211/443 (47%), Gaps = 34/443 (7%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA-- 135
Q D YTYA L++G C + + M+S+ + PN + + LI LCK + A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 136 --RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
R++ + V ++ L+ KE+ L AL +L + G P+VVT +++ LC
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 194 SVGRVMDAVEILE--ESGEQG--------------RLGKVKGGCRFLKEM-ERKG----- 231
A E+ E +S E R GK++ +EM +R+
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 232 -CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C PNV TY++LI C+ + A+++ MK G S + +TY L+ GLC ++
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++L+ M D+ G + YNS+L+GL R + +AL ++ M P V I
Sbjct: 246 WEVLREMLDA--GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G V+DA MI++GG P+++IY+ LI+ C+ ++V E+ L++ G
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T+++V+ GLCR + A +L+ + RG P YS LI LC+ G A
Sbjct: 364 PDVVTYSSVIYGLCRSNRLDEACRLL---LYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L M G G D +T+++L+
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLI 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 131/304 (43%), Gaps = 49/304 (16%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMK--------------ID------------ 265
C P+V TY L+ +C G +D A F++M+ ID
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 266 ---------GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
GI + V Y L+ GL R+D L IL M D G + + YNS++
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRD--HGCEPNVVTYNSLID 122
Query: 317 GLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG-- 372
GL + N+ D A E + M+ + P V + + G G +E A F +M++
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHD 182
Query: 373 -----VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
PNV+ Y LI C+ RV +A EL++ M G P T+ ++ GLC++ V
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A +++ E + G +P Y+ L+ LC A L+ M +G P+ +T+
Sbjct: 243 AAAWEVLREMLDA---GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299
Query: 488 NSLL 491
+L+
Sbjct: 300 GTLI 303
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
+PP + ++I+GL +++ ++ + + R N PS +N ++ + + E +D A
Sbjct: 467 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526
Query: 66 AFYRKK----MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ + A G D Y+ L+ GLC RV + M GV P+ + Y+
Sbjct: 527 VLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSI 586
Query: 122 LIHSLCKNGKVGRARSLMSD 141
L+ L K+ + R L+ D
Sbjct: 587 LLEGLKKSKDLHELRHLVLD 606
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 280/596 (46%), Gaps = 83/596 (13%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV--KEDIDLARAFYR 69
S+F V++ R +I+ + L P + +N++LD + K +I A +
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF- 193
Query: 70 KKMMASGVQGDDYTYAILMKGLCLT----------------------------------- 94
K+M+ S V + +TY IL++G C
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTF 150
++ DGFKLL M +G++PN + YN +I+ LC+ G++ ++++M ++VT+
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ LI YCKE N ALV+ + G P V+T T ++ +C G + A+E L++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
+G + G + R L+EM G P+V TYN LI+ +C TG ++
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+ V DMK G+S + V+Y T++ G C +D+ L++ + M + +G K Y+S+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE--KGIKPDTITYSSL 491
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ G + + EA + ++M + L P + I +C++G++E A + ++M+E+G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT---------------V 417
+P+VV Y LI+ ++ R REA L+ ++ +P T++T +
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G C +G + A ++ E +G+ P Y+ +I C G + A L +MV
Sbjct: 612 IKGFCMKGMMTEADQVFES---MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 478 KGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNH 533
G L +T +L+ L ++ + LN ++ V+ ELS E+ L +NH
Sbjct: 669 SGFLLHTVTVIALVKALHKEGK---VNELNSVIVHVLRSCELSEAEQAKVLVEINH 721
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 226/512 (44%), Gaps = 42/512 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G + R I+D K ++ + P+L +N +++ L +E +F
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D+ TY L+KG C + M G+ P+ + Y +LIHS+CK
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA + M PN+ T++ L+ + ++ + A +L + GF P VVT
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ C G++ DA+ +LE+ E+G R V R +EM
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P+ TY+ LI +CE A D++ +M G+ + TY LI C G ++
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
L++ M + +G + Y+ ++ GL ++++ EA L ++ E+ P V
Sbjct: 538 KALQLHNEMVE--KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 347 ---------------KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
I GFC+ G + +A + F+ M+ + P+ Y+ +IH +C+
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+R+A L KEM G+L T ++ L ++G V ++ +R L +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC---ELSEAEQ 712
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
L++ +G +L +M G LP+
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 45/305 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + TV+ G R+ +++ ++ + + P ++S++ KE DL
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++M+ G+ D++TY L+ C+ + +L + M +GV P+ V Y+ LI
Sbjct: 508 -----YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 124 HSLCKNGKVGRARSLMSDM--EE--PNDVTFSILI--CA-------------YCKEENLV 164
+ L K + A+ L+ + EE P+DVT+ LI C+ +C + +
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A + E PD ++ C G + A + +E + G L +
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 225 KEMERKGCLPNVDTYNILISSYCE----------------TGVLDSALDVFNDMKIDGIS 268
K + ++G + +++ + + CE G +D LDV +M DG
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFL 742
Query: 269 WNFVT 273
N ++
Sbjct: 743 PNGIS 747
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 153/504 (30%), Positives = 245/504 (48%), Gaps = 31/504 (6%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES+FI+++R +A + ++ + ++ P+ K +N +L++LV + A
Sbjct: 140 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 199
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ + +T+ ++MK LC N V +L M G PNSVIY TLIHSL K
Sbjct: 200 YDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKC 259
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M P+ TF+ +I CK + + A ++ + GF PD +T
Sbjct: 260 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITY 319
Query: 186 TKVLELLCSVGRVMDAVEILEESGE---------------QGRLGKVKGGCRFLKEM-ER 229
++ LC +GRV A ++ + GRL K L +M
Sbjct: 320 GYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKA---VLSDMVTS 376
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G +P+V TYN LI Y + G++ AL+V DM+ G N +Y L+ G C G+ID+
Sbjct: 377 YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDE 436
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+L M S +G K +N ++ +E++ EA+E ++M + P +
Sbjct: 437 AYNLLNEM--SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 494
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C ++ A MI EG V N V Y+ LI+A+ + ++EA +L+ EM G
Sbjct: 495 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 554
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
L T+N+++ GLCR G V A L E+ +R G +P S + LI LC G +
Sbjct: 555 LLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD---GLVPSSISCNILINGLCRSGMVEE 611
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A +MV +G PD +T+NSL+
Sbjct: 612 AVEFQKEMVLRGSTPDIVTFNSLI 635
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 141/301 (46%), Gaps = 22/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + ++ G + I++ + +S + P+ FN ++ KE I A
Sbjct: 416 PNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 475
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ M G + D YT+ L+ GLC + + LL M S GV N+V YNTLI++
Sbjct: 476 FRE-MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 534
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ AR L+++M +++T++ LI C+ + A L EK G VP +
Sbjct: 535 RRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSI 594
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ LC G V +AVE +E +G R G+++ G +++
Sbjct: 595 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 654
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ +G P+ TYN L+S C+ G + A + ++ DG N T+ L++ L +
Sbjct: 655 QAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETL 714
Query: 288 D 288
D
Sbjct: 715 D 715
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 10/265 (3%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+KG + D Y +LI G + + MK +GI + + +++R G
Sbjct: 98 QKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPG 157
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+++ M + + YN VL L N A M K+ P +
Sbjct: 158 QTTRLMLEMRNVY-SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 216
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ C V+ A M + G VPN VIY LIH+ + RV EA +L++EM G
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 276
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+P A TFN V+ GLC+ + A K+V R + RG P Y L+ LC+ G
Sbjct: 277 CVPDAETFNDVILGLCKFDRINEAAKMVN---RMLIRGFTPDDITYGYLMNGLCKIGRVD 333
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
+A L ++ P + +N+L+
Sbjct: 334 AAKDLFYRIPK----PTSVIFNTLI 354
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 153/517 (29%), Positives = 253/517 (48%), Gaps = 29/517 (5%)
Query: 39 RFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
RF +TPS + +N++L L + D ++M+ V +T+ + + LC R
Sbjct: 138 RFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAR 197
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD---MEEPNDV-TFSILI 154
D LL M G P++V+Y T+IH+L G V A +L+ + M DV TF+ ++
Sbjct: 198 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVV 257
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS----------VGRVMDAVEI 204
C ++ A L+++ G P VVT +L LC +GRV + +
Sbjct: 258 LGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV 317
Query: 205 LEESGEQGRL--GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ + +G L GK+ + M KGC P+V TYNIL+ C+ G SA+ + ++M
Sbjct: 318 MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM 377
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ G + N VTY TL+ C G DD +L M S +G YN ++Y L ++
Sbjct: 378 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM--SAKGFSMNSQGYNGIIYALGKDG 435
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DEA+ +++M+ P + I C + +++A+ F ++EEG V N + Y+
Sbjct: 436 KLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYN 495
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LIHA R +E L EM HG ++N ++ LC++GNV ++ L+EE M
Sbjct: 496 TLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMT- 554
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-----ICLS 495
+G P + Y+ LI LC+ G + A L +M+ +G+ PD +T+N+L+ + +
Sbjct: 555 --KGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612
Query: 496 QQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLN 532
LL L NE V +V + + CK+R L+
Sbjct: 613 HAALNLLEKLPNENVHPDIVTYNILISW-HCKVRLLD 648
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 217/501 (43%), Gaps = 66/501 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD ++ TVI L + + D + + FN ++ L A
Sbjct: 213 PDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARL 272
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+MM G TY L++GLC T + + + +L R + N V+ NT+I
Sbjct: 273 VDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML----GRVPEVNVVMLNTVIRGCLA 328
Query: 129 NGKVGRARSLMSDMEE---PNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ RA L M P DV T++IL+ CK +A+ +L++ G P++VT
Sbjct: 329 EGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVT 388
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+ +L C G DA +L++ +G + GK+ R ++EM+
Sbjct: 389 YSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMK 448
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+GC P++ TYN +I C +D A +F ++ +G+ N +TY+TLI L GR
Sbjct: 449 SQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQ 508
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+GL++ E G + YN ++ L +E D ++ L++M + + P ++
Sbjct: 509 EGLRLAN--EMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNM 566
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I C G V DA +M+ +G P++V Y+ LI+ C+ A L++++
Sbjct: 567 LINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNEN 626
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+N ++S C+ ++L+++
Sbjct: 627 VHPDIVTYNILISWHCK-------VRLLDD------------------------------ 649
Query: 467 SASMLLVQMVGKGILPDYLTW 487
ASMLL + V GI+P+ TW
Sbjct: 650 -ASMLLDKAVSGGIVPNERTW 669
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 29/336 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARA 66
PPD + ++ GL + V+ D + P++ ++++L + + D ARA
Sbjct: 348 PPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARA 407
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+M A G + Y ++ L ++ + +L+ MKS+G KP+ YNT+I+ L
Sbjct: 408 ML-DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHL 466
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C N ++ A + ++ E N +T++ LI A L L + G DV
Sbjct: 467 CNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDV 526
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
V+ +++ LC G V ++ +LEE +G + GKV+ KE
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G P++ TYN LI+ C+ G +AL++ + + + + VTY+ LI C
Sbjct: 587 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 646
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+DD +L + G I P N +G+ +N
Sbjct: 647 LDDASMLLD------KAVSGGIVP-NERTWGMMVQN 675
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 247/486 (50%), Gaps = 32/486 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+++ L RA + V + +S + P F +++ V+E A
Sbjct: 87 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 146
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +M+ G T +L+ G C RV D + + G +P+ + YNT ++ LC+
Sbjct: 147 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 206
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N VG A +M M +P+ T++I++ CK L A +L + G +PD+ T
Sbjct: 207 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 266
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC+ R+ +A+++ +++ KG P+V T+NILI+
Sbjct: 267 FNTLIAALCTGNRLEEALDLA-------------------RQVTVKGVSPDVYTFNILIN 307
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ G AL +F +MK G + + VTY+TLI LCS G++ L +L+ ME + G
Sbjct: 308 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST--GC 365
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YN+++ GL ++ + +EA E QM + + A+ + I G C D ++DA
Sbjct: 366 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 425
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+QMI EG PN + Y+ ++ YC++ +++A+++++ MT +G+ T+ T+++GLC
Sbjct: 426 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485
Query: 423 RQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ G ALK+ +RG+ +G P Y+P++++L + + A L +M G
Sbjct: 486 KAGRTQVALKV----LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 541
Query: 482 PDYLTW 487
PD LT+
Sbjct: 542 PDALTY 547
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 207/477 (43%), Gaps = 64/477 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PDE+ F T+++G I ++ + + + N +++ K Y
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 181
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ +A G + D TY + GLC + VG K++ VM G P+ YN +++ LCK
Sbjct: 182 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 241
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG++ A+ +++ M + P+ TF+ LI A C L AL L + G PDV T
Sbjct: 242 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 301
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC VG A+ + EE G LGK+ LK+ME
Sbjct: 302 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 361
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC + TYN +I C+ ++ A +VF+ M + GIS N +T++TLI GLC +ID
Sbjct: 362 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 421
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLY-------------------------------- 316
D +++ M EG + YNS+L
Sbjct: 422 DAFELINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479
Query: 317 ---GLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
GL + + AL+ L+ M + P+A + L+ L N+ DA F +M E
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL--FRRNNIRDALSLFREMAE 537
Query: 370 EGGVPNVVIYDCLIHAYCQEE-RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
G P+ + Y + C+ ++EA + M EM G++P S+F + GL G
Sbjct: 538 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 594
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 169/386 (43%), Gaps = 31/386 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + F T+I L + + + V+ ++P + FN +++ L K D LA
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M SG D+ TY L+ LC ++G LL M+S G +++ YNT+I LC
Sbjct: 322 F-EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 380
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A + M+ N +TF+ LI CK++ + +A L+ + S G P+ +
Sbjct: 381 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 440
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +L C G + A +ILE G + G+ + + L+ M
Sbjct: 441 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC-SGGR 286
KG P YN ++ S + AL +F +M G + +TY + RGLC GG
Sbjct: 501 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 560
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD---EALEYLKQMEKLFPRAVD 343
I + + M D +G S + + GL D A+E + MEK+ R D
Sbjct: 561 IKEAFDFMLEMVD--KGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII--MEKVDLRESD 616
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIE 369
S I G+ DA F + +E
Sbjct: 617 VS-AIRGYLKIRKFYDALATFGRFLE 641
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 142/278 (51%), Gaps = 13/278 (4%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFNDMK-IDGISWNFVTYDTLIRG 280
+ EM R+G + + + SY + D A+D + N ++ + GI + V Y+ L+
Sbjct: 4 LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63
Query: 281 LCSGGRIDDGLKILQLM--EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
L G + +K+L+ + E G K + +N+++ L R +Q A+ L++M
Sbjct: 64 LVEGSK----MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + + GF +G++E A R +M+E G V + LI+ YC+ RV +A
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+++ G+ P T+NT ++GLC+ +VG ALK+++ + G P Y+ ++
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD---VMVQEGHDPDVFTYNIVV 236
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
LC+ G + A +L QMV +G LPD T+N+L+ L
Sbjct: 237 NCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 8/274 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++ E + V+++M GI + VT++TL++ LC ++ +L L E
Sbjct: 57 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA--VLMLEE 114
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
S G + + +++ G E + AL +M ++ A ++ +L G+C G
Sbjct: 115 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 174
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VEDA Q I +G P+ + Y+ ++ CQ + V A ++M M G+ P T+N
Sbjct: 175 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 234
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V++ LC+ G + A ++ + + RG LP ++ LI ALC + A L Q+
Sbjct: 235 VVNCLCKNGQLEEAKGILNQ---MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 291
Query: 477 GKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEM 509
KG+ PD T+N L+ L + L L L EM
Sbjct: 292 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 325
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 8/211 (3%)
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY-LKQMEKLFPRAVDRSL--K 347
+K+L + E +EG + ++ +S L + D+A++ L Q++ LF D +
Sbjct: 1 MKVL-VAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNH 59
Query: 348 ILGFCVDGN-VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+L V+G+ ++ + + +M G P+VV ++ L+ A C+ +VR A +++EM+ G
Sbjct: 60 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P +TF T++ G +G++ AL++ R + G + LI C+ G +
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRV---KARMLEMGCSATKVTVNVLINGYCKLGRVE 176
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A + Q + G PD +T+N+ + L Q
Sbjct: 177 DALGYIQQEIADGFEPDQITYNTFVNGLCQN 207
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
S P + T+I GL + I + + D + ++ + FN+++D L K D
Sbjct: 361 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK-DKK 419
Query: 63 LARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ AF +M++ G+Q ++ TY ++ C + +L M + G + + V Y T
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI+ LCK G+ A ++ M P ++ ++ + + N+ +AL L + G
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 539
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD +T V LC G G +K F+ EM KG +P
Sbjct: 540 EPPDALTYKIVFRGLCRGG------------------GPIKEAFDFMLEMVDKGFIPEFS 581
Query: 238 TYNILISSYCETGVLD 253
++ +L G+ D
Sbjct: 582 SFRMLAEGLLNLGMDD 597
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 247/486 (50%), Gaps = 32/486 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+++ L RA + V + +S + P F +++ V+E A
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +M+ G T +L+ G C RV D + + G +P+ + YNT ++ LC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N VG A +M M +P+ T++I++ CK L A +L + G +PD+ T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC+ R+ +A+++ +++ KG P+V T+NILI+
Sbjct: 359 FNTLIAALCTGNRLEEALDLA-------------------RQVTVKGVSPDVYTFNILIN 399
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ G AL +F +MK G + + VTY+TLI LCS G++ L +L+ ME + G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST--GC 457
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YN+++ GL ++ + +EA E QM + + A+ + I G C D ++DA
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+QMI EG PN + Y+ ++ YC++ +++A+++++ MT +G+ T+ T+++GLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577
Query: 423 RQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ G ALK+ +RG+ +G P Y+P++++L + + A L +M G
Sbjct: 578 KAGRTQVALKV----LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Query: 482 PDYLTW 487
PD LT+
Sbjct: 634 PDALTY 639
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 207/477 (43%), Gaps = 64/477 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PDE+ F T+++G I ++ + + + N +++ K Y
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ +A G + D TY + GLC + VG K++ VM G P+ YN +++ LCK
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG++ A+ +++ M + P+ TF+ LI A C L AL L + G PDV T
Sbjct: 334 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC VG A+ + EE G LGK+ LK+ME
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC + TYN +I C+ ++ A +VF+ M + GIS N +T++TLI GLC +ID
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLY-------------------------------- 316
D +++ M EG + YNS+L
Sbjct: 514 DAFELINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 317 ---GLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
GL + + AL+ L+ M + P+A + L+ L N+ DA F +M E
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL--FRRNNIRDALSLFREMAE 629
Query: 370 EGGVPNVVIYDCLIHAYCQEE-RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
G P+ + Y + C+ ++EA + M EM G++P S+F + GL G
Sbjct: 630 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 169/386 (43%), Gaps = 31/386 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + F T+I L + + + V+ ++P + FN +++ L K D LA
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M SG D+ TY L+ LC ++G LL M+S G +++ YNT+I LC
Sbjct: 414 F-EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A + M+ N +TF+ LI CK++ + +A L+ + S G P+ +
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +L C G + A +ILE G + G+ + + L+ M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC-SGGR 286
KG P YN ++ S + AL +F +M G + +TY + RGLC GG
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 652
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD---EALEYLKQMEKLFPRAVD 343
I + + M D +G S + + GL D A+E + MEK+ R D
Sbjct: 653 IKEAFDFMLEMVD--KGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII--MEKVDLRESD 708
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIE 369
S I G+ DA F + +E
Sbjct: 709 VS-AIRGYLKIRKFYDALATFGRFLE 733
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 16/298 (5%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFND 261
EI+ + G G L +K + EM R+G + + + SY + D A+D + N
Sbjct: 79 EIIRKLGAVGALDLMK---VLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQ 135
Query: 262 MK-IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--EDSKEGSKGRISPYNSVLYGL 318
++ + GI + V Y+ L+ L G + +K+L+ + E G K + +N+++ L
Sbjct: 136 LQPLFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R +Q A+ L++M + P + + GF +G++E A R +M+E G
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V + LI+ YC+ RV +A +++ G+ P T+NT ++GLC+ +VG ALK+++
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD- 310
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ G P Y+ ++ LC+ G + A +L QMV +G LPD T+N+L+ L
Sbjct: 311 --VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 8/274 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++ E + V+++M GI + VT++TL++ LC ++ + +L+ M
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEM- 207
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
S G + + +++ G E + AL +M ++ A ++ +L G+C G
Sbjct: 208 -SSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VEDA Q I +G P+ + Y+ ++ CQ + V A ++M M G+ P T+N
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V++ LC+ G + A ++ + + RG LP ++ LI ALC + A L Q+
Sbjct: 327 VVNCLCKNGQLEEAKGILNQ---MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 477 GKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEM 509
KG+ PD T+N L+ L + L L L EM
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 242 LISSYCETGVLDSALDVFND-MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+++ E D+AL + N + D + Y+ +IR L + G +D +K+L + E
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALD-LMKVL-VAEMR 101
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEY-LKQMEKLFPRAVDRSL--KILGFCVDGN- 356
+EG + ++ +S L + D+A++ L Q++ LF D + +L V+G+
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ + + +M G P+VV ++ L+ A C+ +VR A +++EM+ G P +TF T
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTT 221
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G +G++ AL++ R + G + LI C+ G + A + Q +
Sbjct: 222 LMQGFVEEGSIEAALRV---KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 477 GKGILPDYLTWNSLLICLSQ 496
G PD +T+N+ + L Q
Sbjct: 279 ADGFEPDQITYNTFVNGLCQ 298
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
S P + T+I GL + I + + D + ++ + FN+++D L K D
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK-DKK 511
Query: 63 LARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ AF +M++ G+Q ++ TY ++ C + +L M + G + + V Y T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI+ LCK G+ A ++ M P ++ ++ + + N+ +AL L + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD +T V LC G G +K F+ EM KG +P
Sbjct: 632 EPPDALTYKIVFRGLCRGG------------------GPIKEAFDFMLEMVDKGFIPEFS 673
Query: 238 TYNILISSYCETGVLD 253
++ +L G+ D
Sbjct: 674 SFRMLAEGLLNLGMDD 689
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 247/486 (50%), Gaps = 32/486 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+++ L RA + V + +S + P F +++ V+E A
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +M+ G T +L+ G C RV D + + G +P+ + YNT ++ LC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N VG A +M M +P+ T++I++ CK L A +L + G +PD+ T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC+ R+ +A+++ +++ KG P+V T+NILI+
Sbjct: 359 FNTLIAALCTGNRLEEALDLA-------------------RQVTVKGVSPDVYTFNILIN 399
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ G AL +F +MK G + + VTY+TLI LCS G++ L +L+ ME + G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST--GC 457
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YN+++ GL ++ + +EA E QM + + A+ + I G C D ++DA
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFE 517
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+QMI EG PN + Y+ ++ YC++ +++A+++++ MT +G+ T+ T+++GLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577
Query: 423 RQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ G ALK+ +RG+ +G P Y+P++++L + + A L +M G
Sbjct: 578 KAGRTQVALKV----LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Query: 482 PDYLTW 487
PD LT+
Sbjct: 634 PDALTY 639
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 207/477 (43%), Gaps = 64/477 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PDE+ F T+++G I ++ + + + N +++ K Y
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ +A G + D TY + GLC + VG K++ VM G P+ YN +++ LCK
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG++ A+ +++ M + P+ TF+ LI A C L AL L + G PDV T
Sbjct: 334 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC VG A+ + EE G LGK+ LK+ME
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC + TYN +I C+ ++ A +VF+ M + GIS N +T++TLI GLC +ID
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLY-------------------------------- 316
D +++ M EG + YNS+L
Sbjct: 514 DAFELINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 317 ---GLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
GL + + AL+ L+ M + P+A + L+ L N+ DA F +M E
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL--FRRNNIRDALSLFREMAE 629
Query: 370 EGGVPNVVIYDCLIHAYCQEE-RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
G P+ + Y + C+ ++EA + M EM G++P S+F + GL G
Sbjct: 630 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 169/386 (43%), Gaps = 31/386 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + F T+I L + + + V+ ++P + FN +++ L K D LA
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M SG D+ TY L+ LC ++G LL M+S G +++ YNT+I LC
Sbjct: 414 F-EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A + M+ N +TF+ LI CK++ + +A L+ + S G P+ +
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNI 532
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +L C G + A +ILE G + G+ + + L+ M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC-SGGR 286
KG P YN ++ S + AL +F +M G + +TY + RGLC GG
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 652
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD---EALEYLKQMEKLFPRAVD 343
I + + M D +G S + + GL D A+E + MEK+ R D
Sbjct: 653 IKEAFDFMLEMVD--KGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII--MEKVDLRESD 708
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIE 369
S I G+ DA F + +E
Sbjct: 709 VS-AIRGYLKIRKFYDALATFGRFLE 733
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 16/298 (5%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFND 261
EI+ + G G L +K + EM R+G + + + SY + D A+D + N
Sbjct: 79 EIIRKLGAVGALDLMK---VLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQ 135
Query: 262 MK-IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--EDSKEGSKGRISPYNSVLYGL 318
++ + GI + V Y+ L+ L G + +K+L+ + E G K + +N+++ L
Sbjct: 136 LQPLFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R +Q A+ L++M + P + + GF +G++E A R +M+E G
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V + LI+ YC+ RV +A +++ G+ P T+NT ++GLC+ +VG ALK+++
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD- 310
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ G P Y+ ++ LC+ G + A +L QMV +G LPD T+N+L+ L
Sbjct: 311 --VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 8/274 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++ E + V+++M GI + VT++TL++ LC ++ +L L E
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA--VLMLEE 206
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
S G + + +++ G E + AL +M ++ A ++ +L G+C G
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VEDA Q I +G P+ + Y+ ++ CQ + V A ++M M G+ P T+N
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V++ LC+ G + A ++ + + RG LP ++ LI ALC + A L Q+
Sbjct: 327 VVNCLCKNGQLEEAKGILNQ---MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 477 GKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEM 509
KG+ PD T+N L+ L + L L L EM
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 242 LISSYCETGVLDSALDVFND-MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+++ E D+AL + N + D + Y+ +IR L + G +D +K+L + E
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALD-LMKVL-VAEMR 101
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEY-LKQMEKLFPRAVDRSL--KILGFCVDGN- 356
+EG + ++ +S L + D+A++ L Q++ LF D + +L V+G+
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ + + +M G P+VV ++ L+ A C+ +VR A +++EM+ G P +TF T
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G +G++ AL++ R + G + LI C+ G + A + Q +
Sbjct: 222 LMQGFVEEGSIEAALRV---KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 477 GKGILPDYLTWNSLLICLSQ 496
G PD +T+N+ + L Q
Sbjct: 279 ADGFEPDQITYNTFVNGLCQ 298
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
S P + T+I GL + I + + D + ++ + FN+++D L K D
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK-DKK 511
Query: 63 LARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ AF +M++ G+Q ++ TY ++ C + +L M + G + + V Y T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI+ LCK G+ A ++ M P ++ ++ + + N+ +AL L + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD +T V LC G G +K F+ EM KG +P
Sbjct: 632 EPPDALTYKIVFRGLCRGG------------------GPIKEAFDFMLEMVDKGFIPEFS 673
Query: 238 TYNILISSYCETGVLD 253
++ +L G+ D
Sbjct: 674 SFRMLAEGLLNLGMDD 689
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 243/535 (45%), Gaps = 61/535 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +FI+VI RA +K + F + P++KI+N ILD L+ E+ + Y
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIY- 169
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G++ + +TY IL+K LC NRV KLL M S+G P+ V Y TLI SLCK
Sbjct: 170 SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKL 229
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
GKV AR L P+ ++ LI CKE A LL++ + G P+V++ T ++
Sbjct: 230 GKVKEARELAMSF-TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288
Query: 190 ELLCSVGRVMDAVEILEESGEQG---------RLGK---VKGGCR----FLKEMERKGCL 233
L G V ++ +L + +G L K +KGG F M R+G +
Sbjct: 289 NALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV 348
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PNV YN L+ C L A+ VFN M+I+G N TY LI G G +D ++
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGF 351
M G + Y ++ L R + ++A ++ Q+E P V + I G
Sbjct: 409 WNWM--ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Query: 352 CVDGNVEDAKRCFDQMIEEGGVP-----------------------------------NV 376
C G V+ A + FDQM G P N+
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y+ +I+ YC + EA EL+ +M G P A T N V+ C+QG V A++L++
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ LI +C G + A + L +M+ +GI P+ TWN L+
Sbjct: 587 LSAGKWH---PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ F T I+GL + ++ +K D + P+ +N +LD L+K D AF
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK-DRRFGEAF 511
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K M G++ + TY ++ G C +G+ +LL M RG KP+++ N +I +
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK GKV A LM + P+ + ++ LI C + A+V L + S G P+V
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631
Query: 183 VTITKVLELLCSVGRVMDAVEILEES 208
T ++ L S AV+ L+ S
Sbjct: 632 ATWNVLVRHLFSNMGHSGAVQFLDAS 657
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY ++I +D + MK++GIS + + ++I G + LK M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+D + K + YN +L L EN+ M+K + P ++ + C +
Sbjct: 138 QDFR--VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNN 195
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A + +M +G P+ V Y LI + C+ +V+EA EL T P +N
Sbjct: 196 RVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-----PSVPVYN 250
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++G+C++ A +L++E M +G P Y+ +I AL + G + + +L +M
Sbjct: 251 ALINGVCKEYTFEEAFQLLDEMM---NKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 476 VGKGILPDYLTWNSLL 491
+G P+ T+ SL+
Sbjct: 308 FARGCSPNLHTFTSLI 323
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 18/229 (7%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+TY +I L S +D +LQ M+ EG + SV+ R ++AL+
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMK--LEGISCSEDLFISVIGSYRRAGSSEQALKTF 134
Query: 332 KQMEKLFPRAVDRSLKILGFCVDGNVEDAK-----RCFDQMIEEGGVPNVVIYDCLIHAY 386
+M+ V ++KI +D +++ + + M ++G PNV Y+ L+ A
Sbjct: 135 YRMQDF---RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKAL 191
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ RV A +L+ EM+ G P ++ T++S LC+ G V A R +
Sbjct: 192 CKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--------RELAMSFT 243
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
P Y+ LI +C++ F+ A LL +M+ KGI P+ +++ +++ LS
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRA-VDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
VL L E+ ALEY K + K F + + I + ++ + QM E
Sbjct: 46 VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE 105
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + ++ +I +Y + +A + M P +N +L L + N
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDE-NRFQM 164
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ + +M+ G P Y+ L+KALC+ A LLV+M KG PD +++ +L
Sbjct: 165 INPIYSNMKK--DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222
Query: 491 LICLSQ 496
+ L +
Sbjct: 223 ISSLCK 228
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 243/535 (45%), Gaps = 61/535 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +FI+VI RA +K + F + P++KI+N ILD L+ E+ + Y
Sbjct: 111 EDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIY- 169
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G++ + +TY IL+K LC NRV KLL M S+G P+ V Y TLI SLCK
Sbjct: 170 SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKL 229
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
GKV AR L P+ ++ LI CKE A LL++ + G P+V++ T ++
Sbjct: 230 GKVKEARELAMSF-TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTII 288
Query: 190 ELLCSVGRVMDAVEILEESGEQG---------RLGK---VKGGCR----FLKEMERKGCL 233
L G V ++ +L + +G L K +KGG F M R+G +
Sbjct: 289 NALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVV 348
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PNV YN L+ C L A+ VFN M+I+G N TY LI G G +D ++
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGF 351
M G + Y ++ L R + ++A ++ Q+E P V + I G
Sbjct: 409 WNWM--ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGL 466
Query: 352 CVDGNVEDAKRCFDQMIEEGGVP-----------------------------------NV 376
C G V+ A + FDQM G P N+
Sbjct: 467 CGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNL 526
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y+ +I+ YC + EA EL+ +M G P A T N V+ C+QG V A++L++
Sbjct: 527 VTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDR 586
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ LI +C G + A + L +M+ +GI P+ TWN L+
Sbjct: 587 LSAGKWH---PDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 183/423 (43%), Gaps = 28/423 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P ++ +I G+ + + + D + + P++ + +I++ L +++L+ A
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAV 303
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A G + +T+ L+KG L + M GV PN V YN L+H LC
Sbjct: 304 L-AKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLC 362
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G A S+ + ME PN T+S LI Y K +L A + + G P+VV
Sbjct: 363 SKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVV 422
Query: 184 TITKVLELLCSVGRVMDAVEILEE-----------------SGEQGRLGKVKGGCRFLKE 226
T ++++LC A ++E G G G+V + +
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS-GRVDWAIKVFDQ 481
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M GC PN TYN L+ S + A + DM+ GI N VTY+T+I G C G
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
+ + L++L M G+K N V+ ++ + + A++ + ++ K P +
Sbjct: 542 LGEALELLGKM--VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAY 599
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C VE+A +M+ EG PNV ++ L+ A + + + G
Sbjct: 600 TSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLG 659
Query: 405 HGY 407
G+
Sbjct: 660 SGF 662
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 12/256 (4%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY ++I +D + MK++GIS + + ++I G + LK M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+D + K + YN +L L EN+ M+K + P ++ + C +
Sbjct: 138 QDFR--VKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNN 195
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A + +M +G P+ V Y LI + C+ +V+EA EL T P +N
Sbjct: 196 RVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-----PSVPVYN 250
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++G+C++ A +L++E M +G P Y+ +I AL + G + + +L +M
Sbjct: 251 ALINGVCKEYTFEEAFQLLDEMM---NKGIDPNVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 476 VGKGILPDYLTWNSLL 491
+G P+ T+ SL+
Sbjct: 308 FARGCSPNLHTFTSLI 323
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ F T I+GL + ++ +K D + P+ +N +LD L+K D AF
Sbjct: 453 PPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLK-DRRFGEAF 511
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K M G++ + TY ++ G C +G+ +LL M RG KP+++ N +I +
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK GKV A LM + P+ + ++ LI C + A+V L + S G P+V
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631
Query: 183 VTITKVLELLCSVGRVMDAVEILE 206
T ++ L S AV+ L+
Sbjct: 632 ATWNVLVRHLFSNMGHSGAVQFLD 655
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 18/229 (7%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+TY +I L S +D +LQ M+ EG + SV+ R ++AL+
Sbjct: 77 LTYQMMIEKLASEREMDCVQYLLQQMK--LEGISCSEDLFISVIGSYRRAGSSEQALKTF 134
Query: 332 KQMEKLFPRAVDRSLKILGFCVDGNVEDAK-----RCFDQMIEEGGVPNVVIYDCLIHAY 386
+M+ V ++KI +D +++ + + M ++G PNV Y+ L+ A
Sbjct: 135 YRMQDF---RVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKAL 191
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ RV A +L+ EM+ G P ++ T++S LC+ G V A R +
Sbjct: 192 CKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA--------RELAMSFT 243
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
P Y+ LI +C++ F+ A LL +M+ KGI P+ +++ +++ LS
Sbjct: 244 PSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 6/186 (3%)
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRA-VDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
VL L E+ ALEY K + K F + + I + ++ + QM E
Sbjct: 46 VLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLE 105
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + ++ +I +Y + +A + M P +N +L L + N
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDE-NRFQM 164
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ + +M+ G P Y+ L+KALC+ A LLV+M KG PD +++ +L
Sbjct: 165 INPIYSNMKK--DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222
Query: 491 LICLSQ 496
+ L +
Sbjct: 223 ISSLCK 228
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 247/486 (50%), Gaps = 32/486 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+++ L RA + V + +S + P F +++ V+E A
Sbjct: 179 PDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRV 238
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +M+ G T +L+ G C RV D + + G +P+ + YNT ++ LC+
Sbjct: 239 KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQ 298
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N VG A +M M +P+ T++I++ CK L A +L + G +PD+ T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC+ R+ +A+++ +++ KG P+V T+NILI+
Sbjct: 359 FNTLIAALCTGNRLEEALDLA-------------------RQVTVKGVSPDVYTFNILIN 399
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ G AL +F +MK G + + VTY+TLI LCS G++ L +L+ ME + G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMEST--GC 457
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YN+++ GL ++ + +EA E QM + + A+ + I G C D ++DA
Sbjct: 458 PRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFG 517
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+QMI EG PN + Y+ ++ YC++ +++A+++++ MT +G+ T+ T+++GLC
Sbjct: 518 LINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577
Query: 423 RQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ G ALK+ +RG+ +G P Y+P++++L + + A L +M G
Sbjct: 578 KAGRTQVALKV----LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEP 633
Query: 482 PDYLTW 487
PD LT+
Sbjct: 634 PDALTY 639
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 206/477 (43%), Gaps = 64/477 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PDE+ F T+++G I ++ + + + N +++ K Y
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGY 273
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ +A G + D TY + GLC + VG K++ VM G P+ YN +++ LCK
Sbjct: 274 IQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCK 333
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG++ A+ +++ M + P+ TF+ LI A C L AL L + G PDV T
Sbjct: 334 NGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYT 393
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC VG A+ + EE G LGK+ LK+ME
Sbjct: 394 FNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDME 453
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC + TYN +I C+ ++ A +VF+ M + GIS N +T++TLI GLC +ID
Sbjct: 454 STGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKID 513
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLY-------------------------------- 316
D ++ M EG + YNS+L
Sbjct: 514 DAFGLINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 317 ---GLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
GL + + AL+ L+ M + P+A + L+ L N+ DA F +M E
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSL--FRRNNIRDALSLFREMAE 629
Query: 370 EGGVPNVVIYDCLIHAYCQEE-RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
G P+ + Y + C+ ++EA + M EM G++P S+F + GL G
Sbjct: 630 VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLG 686
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 169/386 (43%), Gaps = 31/386 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + F T+I L + + + V+ ++P + FN +++ L K D LA
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M SG D+ TY L+ LC ++G LL M+S G +++ YNT+I LC
Sbjct: 414 F-EEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLC 472
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A + M+ N +TF+ LI CK++ + +A L+ + S G P+ +
Sbjct: 473 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNI 532
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +L C G + A +ILE G + G+ + + L+ M
Sbjct: 533 TYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC-SGGR 286
KG P YN ++ S + AL +F +M G + +TY + RGLC GG
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGP 652
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD---EALEYLKQMEKLFPRAVD 343
I + + M D +G S + + GL D A+E + MEK+ R D
Sbjct: 653 IKEAFDFMLEMVD--KGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEII--MEKVDLRESD 708
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIE 369
S I G+ DA F + +E
Sbjct: 709 VS-AIRGYLKIRKFYDALATFGRFLE 733
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 151/298 (50%), Gaps = 16/298 (5%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFND 261
EI+ + G G L +K + EM R+G + + + SY + D A+D + N
Sbjct: 79 EIIRKLGAVGALDLMK---VLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQ 135
Query: 262 MK-IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--EDSKEGSKGRISPYNSVLYGL 318
++ + GI + V Y+ L+ L G + +K+L+ + E G K + +N+++ L
Sbjct: 136 LQPLFGIQADTVVYNHLLNVLVEGSK----MKLLESVYSEMGARGIKPDVVTFNTLMKAL 191
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R +Q A+ L++M + P + + GF +G++E A R +M+E G
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V + LI+ YC+ RV +A +++ G+ P T+NT ++GLC+ +VG ALK+++
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ G P Y+ ++ LC+ G + A +L QMV +G LPD T+N+L+ L
Sbjct: 312 ---MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 132/274 (48%), Gaps = 8/274 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++ E + V+++M GI + VT++TL++ LC ++ +L L E
Sbjct: 149 YNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA--VLMLEE 206
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
S G + + +++ G E + AL +M ++ A ++ +L G+C G
Sbjct: 207 MSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGR 266
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VEDA Q I +G P+ + Y+ ++ CQ + V A ++M M G+ P T+N
Sbjct: 267 VEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNI 326
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V++ LC+ G + A ++ + + RG LP ++ LI ALC + A L Q+
Sbjct: 327 VVNCLCKNGQLEEAKGILNQ---MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVT 383
Query: 477 GKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEM 509
KG+ PD T+N L+ L + L L L EM
Sbjct: 384 VKGVSPDVYTFNILINALCKVGDPHLALRLFEEM 417
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 242 LISSYCETGVLDSALDVFND-MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+++ E D+AL + N + D + Y+ +IR L + G +D +K+L + E
Sbjct: 44 LLTALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALD-LMKVL-VAEMR 101
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEY-LKQMEKLFPRAVDRSL--KILGFCVDGN- 356
+EG + ++ +S L + D+A++ L Q++ LF D + +L V+G+
Sbjct: 102 REGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSK 161
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ + + +M G P+VV ++ L+ A C+ +VR A +++EM+ G P +TF T
Sbjct: 162 MKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTT 221
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G +G++ AL++ R + G + LI C+ G + A + Q +
Sbjct: 222 LMQGFVEEGSIEAALRV---KARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEI 278
Query: 477 GKGILPDYLTWNSLLICLSQ 496
G PD +T+N+ + L Q
Sbjct: 279 ADGFEPDQITYNTFVNGLCQ 298
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 107/256 (41%), Gaps = 24/256 (9%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DI 61
S P + T+I GL + I + + D + ++ + FN+++D L K+ I
Sbjct: 453 ESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKI 512
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A +M++ G+Q ++ TY ++ C + +L M + G + + V Y T
Sbjct: 513 DDAFGLI-NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI+ LCK G+ A ++ M P ++ ++ + + N+ +AL L + G
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVG 631
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD +T V LC G G +K F+ EM KG +P
Sbjct: 632 EPPDALTYKIVFRGLCRGG------------------GPIKEAFDFMLEMVDKGFIPEFS 673
Query: 238 TYNILISSYCETGVLD 253
++ +L G+ D
Sbjct: 674 SFRMLAEGLLNLGMDD 689
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 250/516 (48%), Gaps = 67/516 (12%)
Query: 37 VSRFNMTPSLKIFNSILDVLVK----EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+ R M P+L N++L+ LV+ I L++A + + GV+ + ++ IL+ G C
Sbjct: 150 MKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVF-TDFIKIGVKINTNSFNILIHGSC 208
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
+ NR G+ ++L M+ G P+++ YNT++ LCK G++ AR L+ DM+ PN
Sbjct: 209 MENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRT 268
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE- 207
TF+IL+ C+ L A ++E VPD T ++ C GR+ +A+ + EE
Sbjct: 269 TFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEM 328
Query: 208 -----------------------SGEQG---------------------------RLGKV 217
S E+G + GK+
Sbjct: 329 ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKM 388
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ +++ME GCLP++ TYN LIS +C+ G +D A + ++M G+ + VT +T+
Sbjct: 389 DEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTM 448
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
+R LC ++D+ +L + G Y +++ G ++ + +AL +M++
Sbjct: 449 LRALCRERKLDEAHDLL--CSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK 506
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P + + I G C G A D+++E G VP+ + Y+ +IH YCQE +V +A
Sbjct: 507 EIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKA 566
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+ +M + P T NT+L GLC++G + ALKL I +G + Y+ +
Sbjct: 567 FQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNT---WISKGKDVDAVSYNTI 623
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I +LC++ F A LL +M K + PD T+N++L
Sbjct: 624 ILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAIL 659
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 232/502 (46%), Gaps = 46/502 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + T++ GL + +N+ + + P+ FN ++ + A
Sbjct: 229 PPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAAN 288
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M + V D +TY +++ G C R+ + +L M++ + P+ V YNTLI+
Sbjct: 289 VIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCF 348
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++G L+ +ME +PN VT+++++ + K+ + + K G +PD+V
Sbjct: 349 EHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIV 408
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C VG++ +A +++E G +G R K+ L
Sbjct: 409 TYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSA 468
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R+G + +Y LI Y + AL ++++MK I + +TY+++I GLC G+
Sbjct: 469 RRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKT 528
Query: 288 DDGL-KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDR 344
+ + K+ +L+E G YN++++G +E Q ++A ++ +M EK F P V
Sbjct: 529 NQAIDKLDELLES---GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTC 585
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ + G C +G +E A + F+ I +G + V Y+ +I + C+E+R EA +L++EM
Sbjct: 586 NTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEE 645
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLV------------------EEDMRG--IGRG 444
P T+N +L GL G + A + + +D R I +
Sbjct: 646 KKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQE 705
Query: 445 SLPGSGHYSPLIKALCEKGGFQ 466
P + YS I LC +G ++
Sbjct: 706 PHPNAIAYSNKINELCSQGRYK 727
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 45/292 (15%)
Query: 240 NILISSYCETGVLDSALDVFNDMK----------------------------------ID 265
+I I +Y G A +FN MK D
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187
Query: 266 ----GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
G+ N +++ LI G C R + +++L M D G YN++L GL ++
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDY--GCPPDNITYNTILDGLCKK 245
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ +EA + L M+ LFP ++ ++G C G +++A + M + VP+ Y
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTY 305
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ +I +C++ R+ EA L +EM P T+NT+++G G+ KL+EE
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME- 364
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
GRG P S Y+ ++K +KG + +M G LPD +T+N+L+
Sbjct: 365 --GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLI 414
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 220/439 (50%), Gaps = 28/439 (6%)
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
YT+ +++K C ++ DG+KL M G+ P+ + YN LI K G+V A L +
Sbjct: 9 YTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEE 68
Query: 142 ME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M EP+ T++ L+ A+CKE + A+ L + GF PDVVT + ++ LC G+
Sbjct: 69 MVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 198 VMDAVEIL-EESGEQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYN 240
V +A+E+L + E+G + G C+ L+EM KG +P+ TYN
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
++S C G + A F+ M G S + V Y+ L+ L G+ D+ +K+ + +
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK--DVI 246
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+G YNS+L GL R++ DEA E K+M P S+ + G C V+
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVD 306
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA + ++M + G VP+VV Y+ L+ C+ V +A EL M +G P +++ VL
Sbjct: 307 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 366
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+GLC+ V A L + R I R +P ++ L+ LC+ G A LL QM
Sbjct: 367 NGLCKTNKVHDARVLFD---RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423
Query: 479 GILPDYLTWNSLLICLSQQ 497
G PDY+ +N+L+ L +Q
Sbjct: 424 GCAPDYVAYNTLMNGLRKQ 442
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 222/454 (48%), Gaps = 27/454 (5%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
+ P+ F V++ + + D K + + ++P +N ++D K+ +D A
Sbjct: 3 ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEA 62
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
Y ++M++ G++ YTY L+ C ++ + +L M +G +P+ V Y+T+I
Sbjct: 63 NRLY-EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 125 SLCKNGKVGRA-RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCK GKV A L M E N V ++ LI CK+EN+ A LLE+ S G+V
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
PD +T +L LC +G+V +A + + +G + GK +
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
K++ KG +P+ TYN ++ +D A ++F M G + N TY ++ G C
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
++DD K+L+ M SK G+ + YN +L GL + N D+A E M P
Sbjct: 302 AKKVDDAHKVLEEM--SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 359
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V S+ + G C V DA+ FD+MIE VP+VV ++ L+ C+ ++ EA +L+ +
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQ 419
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
MT G P +NT+++GL +QG A +L +
Sbjct: 420 MTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQ 453
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 199/423 (47%), Gaps = 25/423 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G + +++ + + + + PS+ +NS+L+ KE
Sbjct: 41 PDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMEL 100
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL-HVMKSRGVKPNSVIYNTLIHSLC 127
K M G + D TY+ ++ GLC T +V + ++L H M RG N+V YN LI+ LC
Sbjct: 101 FKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLC 160
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ + RA L+ +M P+++T++ ++ C+ + A + S G+ PDVV
Sbjct: 161 KDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVV 220
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+L+ L G+ +A+++ ++ +G R + K+M
Sbjct: 221 AYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 280
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GC PN TY+I++S +C +D A V +M G + VTY+ L+ GLC +
Sbjct: 281 VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 340
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D ++ M D+ G I Y+ VL GL + N+ +A +M KL P V +
Sbjct: 341 DKAHELFSTMVDN--GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 398
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ + G C G +++AK DQM G P+ V Y+ L++ ++ R +A L + M
Sbjct: 399 ILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458
Query: 406 GYL 408
G+L
Sbjct: 459 GFL 461
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 147/272 (54%), Gaps = 8/272 (2%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PN T+ +++ S+C+ G L +F M +GIS + + Y+ LI G GR+D+
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKIL 349
++ + M G + I YNS+L +E + EA+E K M EK F P V S I
Sbjct: 64 RLYEEM--VSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 350 GFCVDGNVEDA-KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G V +A + F +MIE G N V Y+ LI+ C++E + A +L++EM GY+
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T+NT+LSGLCR G V A + + RG P Y+ L+ AL ++G A
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDS---MPSRGYSPDVVAYNGLLDALYKEGKTDEA 238
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
L ++ KG +PD +T+NS+L+ L++++
Sbjct: 239 MKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 270
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 174/351 (49%), Gaps = 29/351 (8%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN TF +++ ++CK+ L + L E+ G PD + +++ GRV +A
Sbjct: 6 PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN-- 63
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
R +EM G P++ TYN L++++C+ + A+++F M
Sbjct: 64 -----------------RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAE 106
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKIL--QLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + VTY T+I GLC G++ + L++L +++E G YN+++ GL ++
Sbjct: 107 KGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIE---RGCSANTVAYNALINGLCKDE 163
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ A + L++M + P + + + G C G V +AK+ FD M G P+VV Y+
Sbjct: 164 NIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN 223
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ A +E + EA +L K++ GY+P T+N++L GL R+ N+ A ++ + +
Sbjct: 224 GLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK---KM 280
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G P YS ++ C A +L +M G +PD +T+N LL
Sbjct: 281 VASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 243/504 (48%), Gaps = 31/504 (6%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES+FI+++R +A + ++ + ++ P+ K +N +L++LV + A
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ + +T+ ++MK C N + LL M G PNSVIY TLIHSL K
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M P+ TF+ +I CK + + A ++ + GF PD +T
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 186 TKVLELLCSVGRVMDAVEILEESGE---------------QGRLGKVKGGCRFLKEM-ER 229
++ LC +GRV A ++ + GRL K L +M
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA---VLSDMVTS 382
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G +P+V TYN LI Y + G++ AL+V +DM+ G N +Y L+ G C G+ID+
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+L M S +G K +N ++ +E++ EA+E ++M + P +
Sbjct: 443 AYNVLNEM--SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C ++ A MI EG V N V Y+ LI+A+ + ++EA +L+ EM G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+N+++ GLCR G V A L E+ +R G P + + LI LC G +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD---GHAPSNISCNILINGLCRSGMVEE 617
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A +MV +G PD +T+NSL+
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 22/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + ++ G + I++ + +S + P+ FN ++ KE I A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ M G + D YT+ L+ GLC + + LL M S GV N+V YNTLI++
Sbjct: 482 FRE-MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ AR L+++M +++T++ LI C+ + A L EK G P +
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ LC G V +AVE +E +G R G+++ G +++
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ +G P+ T+N L+S C+ G + A + ++ DG N T+ L++ + +
Sbjct: 661 QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Query: 288 D 288
D
Sbjct: 721 D 721
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
SP DE + ++I+GL RA ++ + + R PS N +++ L + +
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++K+M+ G D T+ L+ GLC R+ DG + +++ G+ P++V +NTL+ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
CK G V A L+ + E PN T+SIL+ + +E L
Sbjct: 680 CKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
+I GL R+ M+ + V+ + TP + FNS+++ L + I+ +RK + A
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK-LQAE 663
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ D T+ LM LC V D LL G PN ++ L+ S+ + R
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRR 723
Query: 136 R 136
R
Sbjct: 724 R 724
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/474 (29%), Positives = 233/474 (49%), Gaps = 39/474 (8%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ +N++L L + AR F+ M++ GV + YTY IL++ LC +
Sbjct: 120 APSVLAYNAVLLALSDASLPSARRFF-DSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+L M+ G PN+V YNTL+ + C+ G+V RA L+ M E PN VTF+ ++ C
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K + +A + ++ G PD V+ ++ C VG +A+ +
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSV-------------- 284
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
EM RKG +P+V T+ LI C+ G L+ A+ + +M+ G+ N +T+ LI
Sbjct: 285 -----FAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI 339
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM 334
G C G +DD L + +E + RI P YN+++ G + DEA E +++M
Sbjct: 340 DGFCKKGFLDDALLAV------REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 335 EK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
E + P V S + +C +G+ A + QM+E G +P+ + Y LI C+E+R+
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A L K M G P T+ +++ G C++GNV AL L +E ++ G LP Y
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKA---GVLPDVVTY 510
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
S LI L + + A LL ++ + +P + +++L+ C +L LL
Sbjct: 511 SVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALL 564
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 27/318 (8%)
Query: 26 MINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDD 81
M+ + +A +LV + P + +++IL K D AF ++M+ +GV D
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG-DTHSAFQLNQQMLENGVLPDA 437
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY+ L++ LC R+GD L M S G++P+ V Y +LI CK G V RA SL +
Sbjct: 438 ITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDE 497
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M + P+ VT+S+LI K A LL K + VP + ++ C
Sbjct: 498 MVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR-CCRNAE 556
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ + +L+ +G + + + + + + + Y++LI +C G + AL
Sbjct: 557 LKSVLALLKGFCMKGLMNEAD---KVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALS 613
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED-----SKEGSK------- 305
M G + N + +LIRGL G + + +++Q + + E SK
Sbjct: 614 FHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNL 673
Query: 306 --GRISPYNSVLYGLYRE 321
G + VL+G+ R+
Sbjct: 674 KEGNVDAVLDVLHGMARD 691
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 247/503 (49%), Gaps = 32/503 (6%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYR 69
+++ IR RA + D V A + + F P+ +N+I+D LV D A Y
Sbjct: 53 HPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVY- 111
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M+A+GV D +T+ I ++ CLT R +LL + RG +V Y T++ L +
Sbjct: 112 VRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAH 167
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G AR L M PN F+ ++ A CK +++ A +LL K G ++ T
Sbjct: 168 GHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTY 227
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV------KGGCR---------FLKEMERK 230
+ LC GR+ +AV +++ V +G C+ +L+ M +
Sbjct: 228 NIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GCLP+ TYN +I YC+ ++ A ++ D G + VTY +LI GLC+ G ++
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
L++ E +G K I YNS++ GL + AL+ + +M E P ++ I
Sbjct: 348 LELFN--EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 405
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C GN+ DA + I +G +P+V ++ LI YC+ ++ A +L++ M +G
Sbjct: 406 NGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIA 465
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T+N+VL+GLC+ G V + +E I +G P Y+ LI+ C + A
Sbjct: 466 PDTITYNSVLNGLCKAGKVNEVNETFQE---MILKGCHPNPITYNILIENFCRSNKMEEA 522
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
S ++V+M +G+ PD +++N+L+
Sbjct: 523 SKVIVKMSQEGLHPDAVSFNTLI 545
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 247/504 (49%), Gaps = 28/504 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ TV+ GL +D + D + ++ P+L FN +L L K L K++
Sbjct: 157 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 216
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + +TY I ++GLC R+ + +L+ M++ V P+ V YNTLI LCK
Sbjct: 217 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 275
Query: 134 RA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A R +M+ P+D T++ +I YCK + A LL+ + GFVPD VT ++
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335
Query: 190 ELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGC---------RFLKEMERKGCL 233
LC+ G V A+E+ E+ +G VKG C + + EM +GC
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P++ TYNI+I+ C+ G + A V ND + G + T++TLI G C ++D L++
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
++ M + G YNSVL GL + + +E E ++M + P + ++ I F
Sbjct: 456 VERMWEY--GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +E+A + +M +EG P+ V ++ LI+ +C+ + A L +++ GY A
Sbjct: 514 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 573
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
TFNT++ + N+ A K+ +E + +G S Y LI C+ A M
Sbjct: 574 DTFNTLIGAFSGKLNMHMAEKIFDE---MLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 630
Query: 472 LVQMVGKGILPDYLTWNSLLICLS 495
LV+M+ KG +P T+ ++ L+
Sbjct: 631 LVEMIKKGFIPSMSTFGRVINSLT 654
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 202/433 (46%), Gaps = 27/433 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+IRGL + M + + + P +N+I+D K +
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + G D TY L+ GLC V +L + +++G+KP+ V+YN+L+ LC
Sbjct: 316 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 375
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A +M++M E P+ T++I+I CK N+ +A V++ + G++PDV T
Sbjct: 376 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 435
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C ++ A++++E M G P+ TYN +++
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVE-------------------RMWEYGIAPDTITYNSVLN 476
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G ++ + F +M + G N +TY+ LI C ++++ K++ M S+EG
Sbjct: 477 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM--SQEGL 534
Query: 305 KGRISPYNSVLYGLYRENQQDEA-LEYLKQMEKLFPRAVDRSLKILG-FCVDGNVEDAKR 362
+N+++YG R + A L + K EK + D ++G F N+ A++
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD+M+ +G + Y LI C+ V A + EM G++P STF V++ L
Sbjct: 595 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 654
Query: 423 RQGNVGTALKLVE 435
V A+ ++
Sbjct: 655 VNHRVFQAVGIIH 667
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 76/302 (25%)
Query: 273 TYDTLIRGLCSGGRI---------------DDGLKILQLMEDSKEGSKGRI--------- 308
Y LIR L S GR+ + L + GR+
Sbjct: 19 AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 78
Query: 309 ----------SPYNSVLYGLYRENQQDEALE-YLKQMEK-LFPRAVDRSLKILGFCV--- 353
YN+++ L D+A + Y++ + + P ++++ FC+
Sbjct: 79 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 138
Query: 354 ----------------------------DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
G+ DA++ FDQM+ PN+ ++ ++HA
Sbjct: 139 PHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHA 198
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ V EA L+ ++ G T+N + GLC G + A++LV+ G+ +
Sbjct: 199 LCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVD----GMRAYA 254
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-----ICLSQQTTW 500
+P Y+ LI+ LC+K Q A L +M+ +G LPD T+N+++ I + Q+ T
Sbjct: 255 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 314
Query: 501 LL 502
LL
Sbjct: 315 LL 316
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 245/505 (48%), Gaps = 28/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD T+I+ L RA + V + +S + P F +++ ++E A
Sbjct: 195 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRV 254
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ KMM +G T +L+ G C RV D + + G +P+ V YNT +H LC+
Sbjct: 255 KAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQ 314
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG V A +M M +P+ T++ +I K L A ++ + G +PD T
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L S R+ +A+++ E +G ++G G R +EM+
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 434
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC P+ TYNILI C G L +ALD+ N+M+ +G + VTY+T+I LC RI+
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIE 494
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ ++ M D++ S+ ++ +N+++ GL + + D+A E ++QM E L P + +
Sbjct: 495 EAEEVFDQM-DAQGISRSAVT-FNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNS 552
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ +C GN++ A + M G +VV Y LI+ C+ R + A +L++ M G
Sbjct: 553 ILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 612
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG-F 465
P +N V+ L R+ N+ AL L E M +G P + Y + ++LC GG
Sbjct: 613 IRPTPKAYNPVIQSLFRRNNLRDALNLFRE-MTEVGEP--PDALTYKIVFRSLCRGGGPI 669
Query: 466 QSASMLLVQMVGKGILPDYLTWNSL 490
+ A LV+MV KG +P++ ++ L
Sbjct: 670 KEAFDFLVEMVNKGFMPEFSSFRML 694
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 150/537 (27%), Positives = 255/537 (47%), Gaps = 75/537 (13%)
Query: 16 TVIRGLGRARMINDVVKATDLV------SRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
+ + R R +D V DLV F + +FN +L+VLV+ + L + Y
Sbjct: 129 SFVESYARLRRFDDAV---DLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVY 185
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G+Q D T L+K LC ++V +L M S GV P+ + TL+ +
Sbjct: 186 -NEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIE 244
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A + + M E P VT ++LI YCK + +AL +++ + GF PD VT
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVT 304
Query: 185 ITKVLELLCSVGRVMDAVEILE---ESG----------------EQGRLGKVKG------ 219
+ LC G V A+++++ + G + G L + KG
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV 364
Query: 220 --GC------------------------RFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
GC +E+ KG P+V T+NILI++ C+ G
Sbjct: 365 DRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPH 424
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+ +F +MK G + + VTY+ LI LCS G++ + L +L ME + G YN+
Sbjct: 425 LGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESN--GCPRSTVTYNT 482
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ L ++ + +EA E QM+ + AV + I G C ++DA +QM++EG
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PN + Y+ ++ YC++ +++A+++++ MT +G+ T+ T+++GLC+ G AL
Sbjct: 543 LQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 602
Query: 432 KLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
KL +RG+ +G P Y+P+I++L + + A L +M G PD LT+
Sbjct: 603 KL----LRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTY 655
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 194/430 (45%), Gaps = 75/430 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + TVI L + +++ + + P FN+++ L ++E +DL
Sbjct: 335 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDL 394
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD---GFKLLHVMKSRGVKPNSVIYN 120
AR ++ G+ D YT+ IL+ LC +VGD G +L MKS G P+ V YN
Sbjct: 395 AR-----ELTVKGLSPDVYTFNILINALC---KVGDPHLGIRLFEEMKSSGCTPDEVTYN 446
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI LC GK+G A L+++ME + VT++ +I A CK+ + A + ++ +
Sbjct: 447 ILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ 506
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VT +++ LC R+ DA E++E+ M ++G PN
Sbjct: 507 GISRSAVTFNTLIDGLCKAKRIDDATELIEQ-------------------MVKEGLQPNN 547
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN +++ YC+ G + A D+ M +G + VTY TLI GLC GR LK+L+
Sbjct: 548 ITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 607
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGN 356
M +G + YN V+ L+R N N
Sbjct: 608 MR--IKGIRPTPKAYNPVIQSLFRRN---------------------------------N 632
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE-RVREASELMKEMTGHGYLPIASTFN 415
+ DA F +M E G P+ + Y + + C+ ++EA + + EM G++P S+F
Sbjct: 633 LRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFR 692
Query: 416 TVLSGLCRQG 425
+ GL G
Sbjct: 693 MLAEGLLNLG 702
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 184/391 (47%), Gaps = 61/391 (15%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
GV+ ++V++N L++ L + K+ S+ ++M +P+ VT + LI A C+ + A
Sbjct: 157 GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTA 216
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
+++LE+ S G PD T T +++ +EE G ++ R +
Sbjct: 217 VLMLEEMSSHGVAPDETTFTTLMQ------------GFIEE-------GSIEAALRVKAK 257
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M GC P T N+LI+ YC+ G ++ AL DG + VTY+T + GLC G
Sbjct: 258 MMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGH 317
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ LK++ LM +EG + YN+V+ L +
Sbjct: 318 VSHALKVMDLM--LQEGHDPDVFTYNTVINCLSK-------------------------- 349
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+G +++AK +QM++ G +P+ ++ LI A + R+ EA +L +E+T G
Sbjct: 350 -------NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P TFN +++ LC+ G+ ++L EE M+ G P Y+ LI LC G
Sbjct: 403 LSPDVYTFNILINALCKVGDPHLGIRLFEE-MKS--SGCTPDEVTYNILIDHLCSMGKLG 459
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+A LL +M G +T+N+++ L ++
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKK 490
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 171/357 (47%), Gaps = 29/357 (8%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFND 261
EI+++ G G ++G ++EM R+G + SY D A+D V N
Sbjct: 94 EIVQKLGTAGAFDLMEG---LVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQ 150
Query: 262 MKID--GISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--EDSKEGSKGRISPYNSVLYG 317
+ D G+ + V ++ L+ L G + LK+L+ + E + G + + N+++
Sbjct: 151 LDNDTFGVQADTVVFNHLLNVLVEGSK----LKLLESVYNEMTGRGIQPDVVTLNTLIKA 206
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L R +Q A+ L++M + P + + GF +G++E A R +M+E G P
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V + LI+ YC+ RV +A +++ G+ P T+NT + GLC+ G+V ALK+++
Sbjct: 267 GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMD 326
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
++ G P Y+ +I L + G A ++ QMV +G LPD T+N+L++ LS
Sbjct: 327 LMLQ---EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALS 383
Query: 496 QQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG---AGSVWLGLRIHD 549
Q N + + + EL+ K + + N L + G LG+R+ +
Sbjct: 384 SQ---------NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFE 431
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 15/264 (5%)
Query: 242 LISSYCETGVLDSALDVFND-MKIDGISWNFVTYDTLIRGLCSGGRID--DGLKILQLME 298
L+++ E ++AL + N + + + + Y+ +++ L + G D +GL + E
Sbjct: 59 LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGL----VRE 114
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEY-LKQMEK-LFPRAVDRSL--KILGFCVD 354
+EG + R S + R + D+A++ L Q++ F D + +L V+
Sbjct: 115 MRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVE 174
Query: 355 GN-VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G+ ++ + +++M G P+VV + LI A C+ +VR A +++EM+ HG P +T
Sbjct: 175 GSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETT 234
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
F T++ G +G++ AL++ + M G P + LI C+ G + A +
Sbjct: 235 FTTLMQGFIEEGSIEAALRVKAKMMEA---GCSPTGVTVNVLINGYCKMGRVEDALGYIQ 291
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ 497
Q + G PD +T+N+ + L Q
Sbjct: 292 QEIADGFEPDQVTYNTFVHGLCQN 315
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 24/251 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P + T+I L + I + + D + ++ S FN+++D L K + ID A
Sbjct: 474 PRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATE 533
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++M+ G+Q ++ TY ++ C + +L M + G + + V Y TLI+ L
Sbjct: 534 LI-EQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+ A L+ M P ++ +I + + NL +AL L + G PD
Sbjct: 593 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T V LC G G +K FL EM KG +P ++ +L
Sbjct: 653 LTYKIVFRSLCRGG------------------GPIKEAFDFLVEMVNKGFMPEFSSFRML 694
Query: 243 ISSYCETGVLD 253
G+ D
Sbjct: 695 AEGLLNLGMDD 705
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 260/538 (48%), Gaps = 64/538 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDID--LARAF 67
ES+FI +++ GRA + + D+ ++ P+ + +N +LDVL+ + + F
Sbjct: 164 ESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVF 223
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +M++ G+ YT+ ++MK LCL N V LL M G PN+++Y TLIH+L
Sbjct: 224 Y--EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALS 281
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+V L+ +M P+ TF+ I CK + A L+++ GF P+
Sbjct: 282 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 341
Query: 184 TITKVLELLCSVGRVMDAVEILEESGE---------------QGRLGKVKG--------- 219
T ++ LC +G+V +A +L + +GRL + K
Sbjct: 342 TYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 401
Query: 220 GC------------------------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
GC + EM+ KGC PNV TY ILI +C+ G L+ A
Sbjct: 402 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 461
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+V ++M G++ N V Y+ LI LC ++ D L + M S +G K I +NS++
Sbjct: 462 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM--SSKGCKPDIFTFNSLI 519
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+GL + N+ +EAL + M E + + + I F G +++A + + M+ G
Sbjct: 520 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 579
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
+ + Y+ LI A C+ + + L ++M G P + N +++GLCR GN+ AL+
Sbjct: 580 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 639
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ DM I RG P Y+ LI LC+ G Q A L ++ +GI PD +T+N+L+
Sbjct: 640 L-RDM--IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 694
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 227/478 (47%), Gaps = 32/478 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T+I L + +N+V+K + + P + FN + L K A
Sbjct: 268 PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 327
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G + +TY +LM GLC +V + LL+ + + PN V++NTLI+
Sbjct: 328 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVS 383
Query: 129 NGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A+++M + P+ T++ LI CK+ LV+A L+ + G P+V+
Sbjct: 384 RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVI 443
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ C GR+ +A +L+E +G + KV+ +M
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 503
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC P++ T+N LI C+ + AL ++ DM ++G+ N +TY+TLI G +
Sbjct: 504 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 563
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ LK++ M G YN ++ L R ++ L + M + L P + +
Sbjct: 564 QEALKLVNDM--LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 621
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C GN++ A MI G P++V Y+ LI+ C+ R +EA L ++
Sbjct: 622 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 681
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P A T+NT++S C++G A L+ RG+ G +P + L+ ++G
Sbjct: 682 GICPDAITYNTLISWHCKEGMFDDAHLLLS---RGVDSGFIPNEVTWYILVSNFIKEG 736
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 32/425 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + ++ GL R +++ + V P++ +FN++++ V + +D A+A
Sbjct: 338 PNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAV 393
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M++ G D +TY L+ GLC + +L++ M+ +G +PN + Y LI C
Sbjct: 394 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 453
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ AR+++ +M N V ++ LI A CK+E + +AL + S G PD+
Sbjct: 454 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 513
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC V + +A+ + ++ M +G + N TYN LI
Sbjct: 514 TFNSLIFGLCKVNKFEEALGLYQD-------------------MLLEGVIANTITYNTLI 554
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++ G + AL + NDM G + +TY+ LI+ LC G I+ GL + + M SK
Sbjct: 555 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM-SKGL 613
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ IS N ++ GL R ALE+L+ M L P V + I G C G ++A
Sbjct: 614 NPNNIS-CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
FD++ EG P+ + Y+ LI +C+E +A L+ G++P T+ ++S
Sbjct: 673 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 732
Query: 422 CRQGN 426
++G+
Sbjct: 733 IKEGD 737
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 17/292 (5%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK-IDGISWN 270
G G+ K L +M+++G + + +++ Y G+ A + DM+ +
Sbjct: 140 GAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPT 199
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
F +Y+ ++ L +G + K++ E +G + + V+ L N+ D A
Sbjct: 200 FRSYNVVLDVLLAG----NCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSAC 255
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
LK M + P A+ I G V + + ++M+ G +P+V ++ IH
Sbjct: 256 ALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ R+ EA++L+ M G+ P + T+ ++ GLCR G V A L + +
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML-------LNKVPN 368
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQ-MVGKGILPDYLTWNSLLICLSQQ 497
P ++ LI +G A ++ + M+ G PD T+N+L++ L ++
Sbjct: 369 PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKK 420
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 233/471 (49%), Gaps = 23/471 (4%)
Query: 39 RFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
RF ++PS + +N +L L + D ++M+ V +T+ + + LC R G
Sbjct: 135 RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAG 194
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD---MEEPNDV-TFSILI 154
D LL M G P++V+Y T+IH+L G V A L+ + M DV TF+ L+
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE---- 210
C + A L+++ + G +P VVT +L+ LC + +A +L E
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV 314
Query: 211 ------QGRL--GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+G L GK+ + M KGC P+V TY+IL+ C+ G SA+ + ++M
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ G + N VTY TL+ C G DD +L M +G YN ++Y L ++
Sbjct: 375 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM--LAKGFSMNSQGYNGIIYALCKDG 432
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ D+A +++M+ P + I C + +E+A+ F +IEEG V N + Y+
Sbjct: 433 KLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYN 492
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LIHA + R +E L EM HG ++N ++ LC++GNV ++ L+EE
Sbjct: 493 TLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEE---M 549
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G P + Y+ LI LC+ G + A L +M+ +G+ PD +T+N+L+
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLI 600
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/544 (23%), Positives = 226/544 (41%), Gaps = 93/544 (17%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP F R L R D + ++R P ++ +++ LV + A
Sbjct: 174 PPTTFTFGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAM 233
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G D T+ L+ GLC RV + +L+ M ++G P+ V Y L+ LC
Sbjct: 234 LLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLC 293
Query: 128 KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ + A +++ + E N V + +I E L A L E S G PDV T +
Sbjct: 294 RTRQADEACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSI 353
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------------------------- 212
++ LC +GR AV +L+E E+G
Sbjct: 354 LMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKG 413
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ GK+ R ++EM+ +GC P++ TYN +I C +++ A
Sbjct: 414 FSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAE 473
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+F ++ +G+ N +TY+TLI L GR +GL++ E G + + YN ++
Sbjct: 474 HIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLAS--EMLLHGCQLDVISYNGLIK 531
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L +E D ++ L++M + + P ++ I C G V DA +M+ +G P
Sbjct: 532 ALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTP 591
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y+ LI+ C+ A L++++ P T+N ++S C+ ++L+
Sbjct: 592 DIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCK-------VRLL 644
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
++ A+MLL + + GI+P+ TW ++
Sbjct: 645 DD-------------------------------AAMLLDKAISGGIVPNERTWGMMVQNF 673
Query: 495 SQQT 498
+QT
Sbjct: 674 VRQT 677
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 260/538 (48%), Gaps = 64/538 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDID--LARAF 67
ES+FI +++ GRA + + D+ ++ P+ + +N +LDVL+ + + F
Sbjct: 146 ESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVF 205
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +M++ G+ YT+ ++MK LCL N V LL M G PN+++Y TLIH+L
Sbjct: 206 Y--EMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALX 263
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+V L+ +M P+ TF+ I CK + A L+++ GF P+
Sbjct: 264 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 323
Query: 184 TITKVLELLCSVGRVMDAVEILEESGE---------------QGRLGKVKG--------- 219
T ++ LC +G+V +A +L + +GRL + K
Sbjct: 324 TYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSV 383
Query: 220 GC------------------------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
GC + EM+ KGC PNV TY ILI +C+ G L+ A
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+V ++M G++ N V Y+ LI LC ++ D L + M S +G K I +NS++
Sbjct: 444 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM--SSKGCKPDIFTFNSLI 501
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+GL + N+ +EAL + M E + + + I F G +++A + + M+ G
Sbjct: 502 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCP 561
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
+ + Y+ LI A C+ + + L ++M G P + N +++GLCR GN+ AL+
Sbjct: 562 LDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF 621
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ DM I RG P Y+ LI LC+ G Q A L ++ +GI PD +T+N+L+
Sbjct: 622 L-RDM--IHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 676
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 227/478 (47%), Gaps = 32/478 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T+I L + +N+V+K + + P + FN + L K A
Sbjct: 250 PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKL 309
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G + +TY +LM GLC +V + LL+ + + PN V++NTLI+
Sbjct: 310 VDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVS 365
Query: 129 NGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A+++M + P+ T++ LI CK+ LV+A L+ + G P+V+
Sbjct: 366 RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVI 425
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ C GR+ +A +L+E +G + KV+ +M
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDM 485
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC P++ T+N LI C+ + AL ++ DM ++G+ N +TY+TLI G +
Sbjct: 486 SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAM 545
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ LK++ M G YN ++ L R ++ L + M + L P + +
Sbjct: 546 QEALKLVNDM--LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 603
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C GN++ A MI G P++V Y+ LI+ C+ R +EA L ++
Sbjct: 604 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 663
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P A T+NT++S C++G A L+ RG+ G +P + L+ ++G
Sbjct: 664 GICPDAITYNTLISWHCKEGMFDDAHLLLS---RGVDSGFIPNEVTWYILVSNFIKEG 718
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 208/425 (48%), Gaps = 32/425 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + ++ GL R +++ + V P++ +FN++++ V + +D A+A
Sbjct: 320 PNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAV 375
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M++ G D +TY L+ GLC + +L++ M+ +G +PN + Y LI C
Sbjct: 376 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 435
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ AR+++ +M N V ++ LI A CK+E + +AL + S G PD+
Sbjct: 436 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 495
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC V + +A+ + ++ M +G + N TYN LI
Sbjct: 496 TFNSLIFGLCKVNKFEEALGLYQD-------------------MLLEGVIANTITYNTLI 536
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++ G + AL + NDM G + +TY+ LI+ LC G I+ GL + + M SK
Sbjct: 537 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM-SKGL 595
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ IS N ++ GL R ALE+L+ M L P V + I G C G ++A
Sbjct: 596 NPNNIS-CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
FD++ EG P+ + Y+ LI +C+E +A L+ G++P T+ ++S
Sbjct: 655 NLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNF 714
Query: 422 CRQGN 426
++G+
Sbjct: 715 IKEGD 719
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 117/303 (38%), Gaps = 38/303 (12%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+KG D Y +LI G + + MK +GI + + +++ G
Sbjct: 104 QKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPG 163
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
++L M + YN VL L N +M + + P +
Sbjct: 164 QATRLLLDMR-GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGV 222
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ C+ V+ A M G VPN ++Y LIHA + RV E +L++EM G
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMG 282
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+P +TFN + GLC+ + A KLV+ R + RG P S Y L+ LC G
Sbjct: 283 CIPDVNTFNDAIHGLCKMLRIHEAAKLVD---RMLLRGFTPNSFTYGVLMHGLCRMGKVD 339
Query: 467 SASMLLVQ--------------------------------MVGKGILPDYLTWNSLLICL 494
A MLL + M+ G PD T+N+L++ L
Sbjct: 340 EARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 399
Query: 495 SQQ 497
++
Sbjct: 400 CKK 402
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 247/501 (49%), Gaps = 32/501 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKK 71
+++ IR RA + D V A + + F P+ +N+I+D LV D A Y +
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVY-VR 111
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+A+GV D +T+ I ++ CLT R +LL + RG +V Y T++ L +G
Sbjct: 112 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 167
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
AR L M PN F+ ++ A CK +++ A +LL K G ++ T
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKV------KGGCR---------FLKEMERKGC 232
+ LC GR+ +AV +++ V +G C+ +L+ M +GC
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP+ TYN +I YC+ ++ A ++ D G + VTY +LI GLC+ G ++ L+
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ E +G K I YNS++ GL + AL+ + +M E P ++ I G
Sbjct: 348 LFN--EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C GN+ DA + I +G +P+V ++ LI YC+ ++ A +L++ M +G P
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+N+VL+GLC+ G V + +E I +G P Y+ LI+ C + AS
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQE---MILKGCHPNPITYNILIENFCRSNKMEEASK 522
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
++V+M +G+ PD +++N+L+
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLI 543
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 247/504 (49%), Gaps = 28/504 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ TV+ GL +D + D + ++ P+L FN +L L K L K++
Sbjct: 155 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 214
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + +TY I ++GLC R+ + +L+ M++ V P+ V YNTLI LCK
Sbjct: 215 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 273
Query: 134 RA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A R +M+ P+D T++ +I YCK + A LL+ + GFVPD VT ++
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333
Query: 190 ELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGC---------RFLKEMERKGCL 233
LC+ G V A+E+ E+ +G VKG C + + EM +GC
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P++ TYNI+I+ C+ G + A V ND + G + T++TLI G C ++D L++
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
++ M + G YNSVL GL + + +E E ++M + P + ++ I F
Sbjct: 454 VERMWEY--GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +E+A + +M +EG P+ V ++ LI+ +C+ + A L +++ GY A
Sbjct: 512 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 571
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
TFNT++ + N+ A K+ +E + +G S Y LI C+ A M
Sbjct: 572 DTFNTLIGAFSGKLNMHMAEKIFDE---MLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 628
Query: 472 LVQMVGKGILPDYLTWNSLLICLS 495
LV+M+ KG +P T+ ++ L+
Sbjct: 629 LVEMIKKGFIPSMSTFGRVINSLT 652
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 202/433 (46%), Gaps = 27/433 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+IRGL + M + + + P +N+I+D K +
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + G D TY L+ GLC V +L + +++G+KP+ V+YN+L+ LC
Sbjct: 314 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 373
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A +M++M E P+ T++I+I CK N+ +A V++ + G++PDV T
Sbjct: 374 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 433
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C ++ A++++E M G P+ TYN +++
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVE-------------------RMWEYGIAPDTITYNSVLN 474
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G ++ + F +M + G N +TY+ LI C ++++ K++ M S+EG
Sbjct: 475 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM--SQEGL 532
Query: 305 KGRISPYNSVLYGLYRENQQDEA-LEYLKQMEKLFPRAVDRSLKILG-FCVDGNVEDAKR 362
+N+++YG R + A L + K EK + D ++G F N+ A++
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD+M+ +G + Y LI C+ V A + EM G++P STF V++ L
Sbjct: 593 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652
Query: 423 RQGNVGTALKLVE 435
V A+ ++
Sbjct: 653 VNHRVFQAVGIIH 665
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 115/302 (38%), Gaps = 76/302 (25%)
Query: 273 TYDTLIRGLCSGGRI---------------DDGLKILQLMEDSKEGSKGRI--------- 308
Y LIR L S GR+ + L + GR+
Sbjct: 17 AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 76
Query: 309 ----------SPYNSVLYGLYRENQQDEALE-YLKQMEK-LFPRAVDRSLKILGFCVDGN 356
YN+++ L D+A + Y++ + + P ++++ FC+
Sbjct: 77 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 136
Query: 357 VEDAKRCFDQMIEEGGV-------------------------------PNVVIYDCLIHA 385
A R + G V PN+ ++ ++HA
Sbjct: 137 PHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHA 196
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ V EA L+ ++ G T+N + GLC G + A++LV+ G+ +
Sbjct: 197 LCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVD----GMRAYA 252
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-----ICLSQQTTW 500
+P Y+ LI+ LC+K Q A L +M+ +G LPD T+N+++ I + Q+ T
Sbjct: 253 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 312
Query: 501 LL 502
LL
Sbjct: 313 LL 314
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 247/501 (49%), Gaps = 32/501 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKK 71
+++ IR RA + D V A + + F P+ +N+I+D LV D A Y +
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVY-VR 110
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+A+GV D +T+ I ++ CLT R +LL + RG +V Y T++ L +G
Sbjct: 111 MLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 166
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
AR L M PN F+ ++ A CK +++ A +LL K G ++ T
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKV------KGGCR---------FLKEMERKGC 232
+ LC GR+ +AV +++ V +G C+ +L+ M +GC
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP+ TYN +I YC+ ++ A ++ D G + VTY +LI GLC+ G ++ L+
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ E +G K I YNS++ GL + AL+ + +M E P ++ I G
Sbjct: 347 LFN--EAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C GN+ DA + I +G +P+V ++ LI YC+ ++ A +L++ M +G P
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+N+VL+GLC+ G V + +E I +G P Y+ LI+ C + AS
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQE---MILKGCHPNPITYNILIENFCRSNKMEEASK 521
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
++V+M +G+ PD +++N+L+
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLI 542
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 247/504 (49%), Gaps = 28/504 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ TV+ GL +D + D + ++ P+L FN +L L K L K++
Sbjct: 154 YCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVI 213
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + +TY I ++GLC R+ + +L+ M++ V P+ V YNTLI LCK
Sbjct: 214 QRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQ 272
Query: 134 RA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A R +M+ P+D T++ +I YCK + A LL+ + GFVPD VT ++
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGC---------RFLKEMERKGCL 233
LC+ G V A+E+ E+ +G VKG C + + EM +GC
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P++ TYNI+I+ C+ G + A V ND + G + T++TLI G C ++D L++
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
++ M + G YNSVL GL + + +E E ++M + P + ++ I F
Sbjct: 453 VERMWEY--GIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +E+A + +M +EG P+ V ++ LI+ +C+ + A L +++ GY A
Sbjct: 511 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 570
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
TFNT++ + N+ A K+ +E + +G S Y LI C+ A M
Sbjct: 571 DTFNTLIGAFSGKLNMHMAEKIFDE---MLSKGHRADSYTYRVLIDGSCKTANVDRAYMH 627
Query: 472 LVQMVGKGILPDYLTWNSLLICLS 495
LV+M+ KG +P T+ ++ L+
Sbjct: 628 LVEMIKKGFIPSMSTFGRVINSLT 651
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 202/433 (46%), Gaps = 27/433 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+IRGL + M + + + P +N+I+D K +
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + G D TY L+ GLC V +L + +++G+KP+ V+YN+L+ LC
Sbjct: 313 LKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCL 372
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A +M++M E P+ T++I+I CK N+ +A V++ + G++PDV T
Sbjct: 373 QGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFT 432
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C ++ A++++E M G P+ TYN +++
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVE-------------------RMWEYGIAPDTITYNSVLN 473
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G ++ + F +M + G N +TY+ LI C ++++ K++ M S+EG
Sbjct: 474 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKM--SQEGL 531
Query: 305 KGRISPYNSVLYGLYRENQQDEA-LEYLKQMEKLFPRAVDRSLKILG-FCVDGNVEDAKR 362
+N+++YG R + A L + K EK + D ++G F N+ A++
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD+M+ +G + Y LI C+ V A + EM G++P STF V++ L
Sbjct: 592 IFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651
Query: 423 RQGNVGTALKLVE 435
V A+ ++
Sbjct: 652 VNHRVFQAVGIIH 664
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 115/302 (38%), Gaps = 76/302 (25%)
Query: 273 TYDTLIRGLCSGGRI---------------DDGLKILQLMEDSKEGSKGRI--------- 308
Y LIR L S GR+ + L + GR+
Sbjct: 16 AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 75
Query: 309 ----------SPYNSVLYGLYRENQQDEALE-YLKQMEK-LFPRAVDRSLKILGFCVDGN 356
YN+++ L D+A + Y++ + + P ++++ FC+
Sbjct: 76 MDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTAR 135
Query: 357 VEDAKRCFDQMIEEGGV-------------------------------PNVVIYDCLIHA 385
A R + G V PN+ ++ ++HA
Sbjct: 136 PHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHA 195
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ V EA L+ ++ G T+N + GLC G + A++LV+ G+ +
Sbjct: 196 LCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVD----GMRAYA 251
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-----ICLSQQTTW 500
+P Y+ LI+ LC+K Q A L +M+ +G LPD T+N+++ I + Q+ T
Sbjct: 252 VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATE 311
Query: 501 LL 502
LL
Sbjct: 312 LL 313
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 231/442 (52%), Gaps = 31/442 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ GV + YTY IL++ LC R+ + ++ M+ G PN+V YNTL+ + C+ G+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 132 VGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A ++S M E PN VTF+ ++ CK + A + ++ G PDVV+
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+L C VG + +++ + E M ++G +P+V T+ LI +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSE-------------------MTQRGLVPDVVTFTSLIHAT 161
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G L+ A+ + M+ G+ N VT+ LI G C G +DD L L + E K G +
Sbjct: 162 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL--LAVEEMRKCGIQP 219
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ YN+++ G + + D A E +++ME ++ P V S I G+C GN++ A +
Sbjct: 220 SVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLN 279
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M+++G +P+ + Y LI C+E+R+ +A EL + M G P T+ T++ G C++
Sbjct: 280 QKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKE 339
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
GNV AL L +E +R +G LP YS LI L + + A LL ++ + +PD
Sbjct: 340 GNVEKALSLHDEMIR---KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDN 396
Query: 485 LTWNSLLICLSQQTTWLLLLLL 506
+ +++L++C S+ ++ LL
Sbjct: 397 IKYDALMLCCSKAEFKSVVALL 418
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 222/486 (45%), Gaps = 80/486 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLV-SRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P+ + T++ RA ++ + L+ N P+L FNS+++ L K ++ AR
Sbjct: 43 PNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARK 102
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +M+ G+ D +Y L+ G C + + + M RG+ P+ V + +LIH+
Sbjct: 103 VF-DEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT 161
Query: 127 CKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G + +A +L++ M E N+VTF+ LI +CK+ L +AL+ +E+ G P V
Sbjct: 162 CKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSV 221
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V ++ C +GR+ A E++ +EME K P+V TY+ +
Sbjct: 222 VCYNALINGYCKLGRMDLARELI-------------------REMEAKRVKPDVVTYSTI 262
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM----- 297
IS YC+ G LDSA + M G+ + +TY +LIRGLC R++D ++ + M
Sbjct: 263 ISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 322
Query: 298 ------------EDSKEGS--------------------------------KGRISPYNS 313
KEG+ R +
Sbjct: 323 QPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHR 382
Query: 314 VLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+L+ LY E+ + ++Y M K ++V LK GFC+ G +++A + + M++
Sbjct: 383 LLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK--GFCMKGLMKEADKVYQSMLDR 440
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
+ +Y LIH +C+ VR+A K+M G+ P +++ +++ GL +G V A
Sbjct: 441 NWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500
Query: 431 LKLVEE 436
+++
Sbjct: 501 DNAIQD 506
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 243/506 (48%), Gaps = 30/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + T+I G +AR + D + + + P ++N+I+ L +D A
Sbjct: 165 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 224
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR M TY IL+ LC + R+ D +L M G PN V YNTLI+ C
Sbjct: 225 YRD--MQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 282
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A L + M E P+ T++ILI YCK+E + LL++ +G P+ +
Sbjct: 283 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 342
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ L G+ +DA + + + ++G++ + M
Sbjct: 343 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 402
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+GCLP++ TYNI+IS C +D A + M G + VTY++++ GLC ++
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 462
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D+ ++ +++ + G + ++++ GL + + D+A + L++ME+ P V +
Sbjct: 463 DEAYEVYEVLRNG--GYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I GFC ++ + F +M+++G VP V+ Y +I C+ RVR+ L+K M
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P A + +V+ GLC+ + A +L + M+ G P Y+ L+ LC+
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKL-MKQT--GCAPTVVTYNVLVDKLCKVSRL 637
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A LL M G LPD +T+NS+
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVF 663
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 228/482 (47%), Gaps = 30/482 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D TY+ L+ G C ++LL M+ RG+ P++ +YNT+I LC NG+V A
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 225
Query: 140 SDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
DM+ P+ +T++IL+ A CK + +A ++LE G P+VVT ++ C +G
Sbjct: 226 RDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLG 285
Query: 197 RVMDAV----EILEESGEQG------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ +AV ++LE S + + + G + L+EM + GC PN TYN
Sbjct: 286 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ S ++G A ++ M + T++ +I C G++D ++ QLM D
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD- 404
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
G I YN ++ G R N+ D+A + L++M + P V + + G C V+
Sbjct: 405 -RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A ++ + G +VV LI C+ R+ +A +L++EM +G P + ++
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILI 523
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
G C+ + +L E + +G +P YS +I LC+ + MLL M+ +
Sbjct: 524 HGFCKADQLDKSLAFFSE---MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580
Query: 479 GILPDYLTWNSLL--ICLSQQ--TTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHL 534
G+ PD + + S++ +C S + L L+ + VV +K CK+ L+
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640
Query: 535 AH 536
H
Sbjct: 641 IH 642
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 202/447 (45%), Gaps = 33/447 (7%)
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+D+D A F+ G + +T L+ + + + L + P+S+
Sbjct: 110 DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSIT 169
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
Y+TLI+ CK +A L+ +ME+ P++ ++ +I C + +ALV +
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY-RDM 228
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
P V+T T +++ LC R+ DA ILE+ M GC P
Sbjct: 229 QRNCAPSVITYTILVDALCKSARISDASLILED-------------------MIEAGCAP 269
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV TYN LI+ +C+ G +D A+ +FN M + S + TY+ LI G C R DG K+L
Sbjct: 270 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 329
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
Q M K G + YN+++ L + + +A + M P +L I FC
Sbjct: 330 QEM--VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFC 387
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++ A F M + G +P++ Y+ +I C+ R+ +A +L++ MT G P
Sbjct: 388 KVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVV 447
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+N+++SGLC+ V A ++ E G G S LI LC+ A LL
Sbjct: 448 TYNSIVSGLCKASQVDEAYEVYEVLRNG---GYFLDVVTCSTLIDGLCKSRRLDDAEKLL 504
Query: 473 VQMVGKGILPDYLTWNSLL--ICLSQQ 497
+M G PD + + L+ C + Q
Sbjct: 505 REMERNGSAPDVVAYTILIHGFCKADQ 531
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 162/377 (42%), Gaps = 59/377 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + T++ L ++ D ++ R + PS FN ++D+ K +DLA
Sbjct: 339 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 398
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN------- 120
+ + M G D YTY I++ G C NR+ D +LL M G P+ V YN
Sbjct: 399 F-QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 457
Query: 121 ----------------------------TLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
TLI LCK+ ++ A L+ +ME P+ V
Sbjct: 458 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 517
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ILI +CK + L +L + G VP V+T + V++ LC RV D +L+
Sbjct: 518 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 577
Query: 209 GEQG-------RLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G + G C+ K M++ GC P V TYN+L+ C+ L
Sbjct: 578 LERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRL 637
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A+ + M+ DG + VTY+++ G D ++ Q M+ G Y+
Sbjct: 638 DEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMK--SRGCSPTPFMYS 695
Query: 313 SVLYGLYRENQQDEALE 329
+L L E + D+A+E
Sbjct: 696 LLLTKLVAEEKMDQAME 712
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 140/308 (45%), Gaps = 22/308 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I G RA I+D + + ++ P + +NSI+ L K +D A
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y + + G D T + L+ GLC + R+ D KLL M+ G P+ V Y LIH C
Sbjct: 469 Y-EVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 527
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ ++ + S+M + P +T+SI+I CK + + +LL+ G PD +
Sbjct: 528 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAI 587
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T V++ LC +A E+ + + G ++ ++ L+ M
Sbjct: 588 VYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVM 647
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E GCLP+ TYN + + ++ D A +F MK G S Y L+ L + ++
Sbjct: 648 ESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKM 707
Query: 288 DDGLKILQ 295
D ++I +
Sbjct: 708 DQAMEIWE 715
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD ++ +VI GL ++ ++ + L+ + P++ +N ++D L K L A +
Sbjct: 584 PDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVS-RLDEAIH 642
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M S G D TY + G + F+L MKSRG P +Y+ L+ L
Sbjct: 643 LLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLV 702
Query: 128 KNGKVGRARSLMSDMEE 144
K+ +A + + E
Sbjct: 703 AEEKMDQAMEIWEEALE 719
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 210/415 (50%), Gaps = 30/415 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
T+ I++ GLC NR+ + MK +G PN YN LI+ CK KV RA L+ +M
Sbjct: 9 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 68
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+E PN VT+S +I +C++ + A L + G +P++VT +L LC G +
Sbjct: 69 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 128
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+A E+L+E M +G P+ +Y+ L++ C+TG +D AL V
Sbjct: 129 DEAYELLDE-------------------MRERGLQPDKFSYDTLMAGLCKTGKIDMALKV 169
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
F D + V Y TLI GLC GR+D+ K+ + M ++ + + + +++ GL
Sbjct: 170 FEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMREN--SCEPDVVTFTALMDGL 227
Query: 319 YRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ ++ EA + L+ ME P + S I G C G V DA+ F +MI G PNV
Sbjct: 228 CKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNV 287
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y+ LIH +C V A LM+EMT G LP T+NT++ GLC+ G A +L
Sbjct: 288 VTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF-G 346
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
DM+ + P YS LI C+ A L M+ + +LPD +T+++L+
Sbjct: 347 DMK--AKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 230/497 (46%), Gaps = 62/497 (12%)
Query: 52 ILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG 111
++D L K + Y KM G +++TY +L+ G C ++V + LL MK G
Sbjct: 13 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNAL 167
+ PN V Y+T+IH C+ KV A L M E PN VT++ L+ C+ + A
Sbjct: 73 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG------------------ 209
LL++ G PD + ++ LC G++ A+++ E++
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192
Query: 210 -EQGRLGK-----------------------VKGGCR---------FLKEMERKGCLPNV 236
+ GRL + + G C+ L+ ME + C PNV
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY+ LI C+TG + A +VF M + GI N VTY++LI G C +D L +++
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVD 354
M + G I YN+++ GL + + EA M+ F P + S I GFC
Sbjct: 313 M--TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKL 370
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
++ A+ FD M+++ +P+VV + L+ YC V +A L++EM P T+
Sbjct: 371 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 430
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+++ G C+ G + A ++++ R RG P Y+ LI A C G A LL +
Sbjct: 431 TSLVDGFCKVGRMVEARRVLK---RMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE 487
Query: 475 MVGKGILPDYLTWNSLL 491
MVG G+ P+ +T+ SL+
Sbjct: 488 MVGNGVQPNVITYRSLI 504
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 231/510 (45%), Gaps = 26/510 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + TVI G R ++ K + P+L +N++L L + +
Sbjct: 75 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 134
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G+Q D ++Y LM GLC T ++ K+ + P+ V Y+TLI LCK
Sbjct: 135 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 194
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L M E P+ VTF+ L+ CK + L A +LE P+V+T
Sbjct: 195 TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVIT 254
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEME 228
+ +++ LC G+V DA E+ + +G V G C ++EM
Sbjct: 255 YSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT 314
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GCLP++ TYN LI C+TG A +F DMK + + +TY LI G C RID
Sbjct: 315 ATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERID 374
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ M K+ + +++++ G D+A L++M P +
Sbjct: 375 MARTLFDDM--LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ GFC G + +A+R +M + G PNVV Y LI A+C+ + A +L++EM G+G
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ +++ G C G++ A K++E R Y ++ LC G
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLER--DENCKADMFAYRVMMDGLCRTGRMS 550
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+A LL + G P + + +L+ L Q
Sbjct: 551 AALELLEAIKQSGTPPRHDIYVALIRGLCQ 580
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 206/451 (45%), Gaps = 59/451 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDIDLARA 66
PD F ++ GL + + + + + + N TP++ ++S++D L K + D
Sbjct: 215 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F K+M+ G++ + TY L+ G C+TN V L+ M + G P+ + YNTLI L
Sbjct: 275 F--KRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGL 332
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+ A L DM+ P+ +T+S LI +CK E + A L + +PDV
Sbjct: 333 CKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDV 392
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT + ++E C+ G V DA +LEE ++G++ R LK
Sbjct: 393 VTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 452
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M ++GC PNV TY LI ++C G A + +M +G+ N +TY +LI G C G
Sbjct: 453 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGD 512
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+++ K+L+ +E E K + Y ++ GL R + ALE L+ ++
Sbjct: 513 LEEARKMLERLE-RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIK----------- 560
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT-GH 405
+ G P IY LI CQ + + +A E+++EMT
Sbjct: 561 ----------------------QSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSR 598
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P A + V+ L R+G A L +E
Sbjct: 599 KSRPNAEAYEAVIQELAREGRHEEANALADE 629
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 7/224 (3%)
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N +T+ +I GLC R+ + M+ K+G+ YN ++ G + ++ A
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMK--KKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
LK+M++ L P V S I GFC V+ A + F QM+E G +PN+V Y+ L+ C
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ + EA EL+ EM G P +++T+++GLC+ G + ALK+ E++ G P
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG---DCPP 180
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS LI LC+ G A L +M PD +T+ +L+
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALM 224
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 38/310 (12%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C NV T+ I+I C+ L A F MK G N TY+ LI G C ++
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
+L+ M++S G + Y++V++G R+ + D A + +QM + P V + +
Sbjct: 63 LLLKEMKES--GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C +G +++A D+M E G P+ YD L+ C+ ++ A ++ ++ + P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEED---------------MRGIGRGS--------- 445
++T+++GLC+ G + A KL E+ M G+ +G
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 446 --------LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
P YS LI LC+ G + A + +M+ +GI P+ +T+NSL+ C++
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300
Query: 496 QQTTWLLLLL 505
LLL+
Sbjct: 301 NGVDSALLLM 310
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 239/475 (50%), Gaps = 24/475 (5%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDL-ARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
L RF + PS + +N +L VL + D A A YR+ + V +T+ + + LC
Sbjct: 129 LPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRL 188
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD---MEEPNDV-TF 150
R + LL M G P++V+Y T+IH+LC G V A +L+++ M DV TF
Sbjct: 189 GRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTF 248
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
++ C + A L+++ + G +P V+T +L+ LC V + +A +L E
Sbjct: 249 DDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPE 308
Query: 211 QG--RLGKVKGGC----------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
V GGC + M KGC P+ TY+IL+ C+ G + SA+ +
Sbjct: 309 LNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRL 368
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+M+ G + N VTY ++ C G DD +L+ M S +G YN ++Y L
Sbjct: 369 LREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM--SAKGLTLNSQGYNGMIYAL 426
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
++ + DEA+ +++M + P + I C + +E+A+ F+ ++EEG V N
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ Y+ +IHA ++ R ++A L KEM HG ++N ++ +C+ GNV +L L+EE
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P + Y+ LI LC++ + A L QM+ +G+ PD +T+N+L+
Sbjct: 547 MAE---KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 232/493 (47%), Gaps = 26/493 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M H + PP F R L R N+ + ++R P ++ +++ L +
Sbjct: 165 MVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQG 224
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
A +M+ G D T+ +++G+C RV + +L+ M ++G P + Y
Sbjct: 225 GVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYG 284
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L+ LC+ + AR+++ + E N V F+ +I E L A L E G P
Sbjct: 285 FLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T + ++ LC +GR+ AV R L+EME+KG PNV TY
Sbjct: 345 DAHTYSILMHGLCKLGRISSAV-------------------RLLREMEKKGFAPNVVTYT 385
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
I++ S+C+ G+ D + +M G++ N Y+ +I LC GR+D+ + ++Q M
Sbjct: 386 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR-- 443
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+G I YN+++Y L Q +EA + + E + + + I DG +
Sbjct: 444 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA R +MI G +VV Y+ LI A C++ V + L++EM G P ++N ++
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
S LC++ V AL+L ++ + +G P Y+ LI LC+ G +A LL ++ +
Sbjct: 564 SELCKERRVRDALELSKQ---MLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 620
Query: 479 GILPDYLTWNSLL 491
+ PD +T+N L+
Sbjct: 621 NVHPDIITYNILI 633
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 145/308 (47%), Gaps = 22/308 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
PD + ++ GL + I+ V+ + + P++ + +L K + D RA
Sbjct: 344 PDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 403
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M A G+ + Y ++ LC R+ + L+ M+S+G P+ YNT+I+ LC
Sbjct: 404 L-EEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
N ++ A + ++ E N +T++ +I A ++ +A+ L ++ G DVV
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ +++ +C G V ++ +LEE E+G + +V+ K+M
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G P++ TYN LI+ C+ G + +AL++ + + + + +TY+ LI C +
Sbjct: 583 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLL 642
Query: 288 DDGLKILQ 295
DD +L
Sbjct: 643 DDAAMLLN 650
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 55/217 (25%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ T+I L R D V+ + + + +N ++ + K+ ++D + ++M
Sbjct: 489 YNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLL-EEM 547
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G++ ++ +Y IL+ LC RV D +L M ++G+ P+ V YNTLI+ LCK G +
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 133 GRARSLMSDME----EPNDVTFSILI-----------------------CA--------- 156
A +L+ + P+ +T++ILI C
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRRIMQI 667
Query: 157 -----------------YCKEENLVNALVLLEKSFSF 176
YC N A +LLE+S SF
Sbjct: 668 LPDKNFKLYLHTKDSYLYCSRANECKANILLEQSTSF 704
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 211 bits (538), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 240/490 (48%), Gaps = 32/490 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
+ + + +I L +AR++++ + D+ SR M P + N ++ L + + A
Sbjct: 79 NHTTYYNLIHPLCKARLLDEAMGLLLDMKSR-GMNPGTLLHNVVIGGLCRAGRLRHALGV 137
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR+ M D TY L+ GL R+ D ++L M S P++ ++ SLC
Sbjct: 138 YRQ--MNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLC 195
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSF-GFVPDV 182
+V AR L+ +M N +T+S L+ CK E L A+ LL + GF PD+
Sbjct: 196 LGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDI 255
Query: 183 VTITKVLELLCSVGRVMDAVEILEES-------------GEQGRLGKVKGGCRFLKEMER 229
VT + V++ LC GR+ DAV+I EE G R G + R L +M
Sbjct: 256 VTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 315
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
C P+V TY L+S++C+ G LD A ++F M + +S + VT+ +L+ GLC GR++D
Sbjct: 316 DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 375
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
L++L+ E ++ G I YN V+ G + NQ +A E + P V ++
Sbjct: 376 ALELLE--EITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNIL 433
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G C G + A + DQ+ EGG +V +Y ++ A C++ R +A + +EM
Sbjct: 434 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 493
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
GY+P A+TF TV+ LC+ A +L+EE I G PG G ++ A C G
Sbjct: 494 GYVPAAATFATVVFALCKAHQPQQAHELLEE---MIKYGHTPGPGTCDAVVSAYCRAGMI 550
Query: 466 QSASMLLVQM 475
Q A L ++
Sbjct: 551 QKADELASEL 560
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 152/532 (28%), Positives = 263/532 (49%), Gaps = 37/532 (6%)
Query: 8 PPDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLAR 65
P D S F V+RGL A++ + D + ++P N+IL L D A
Sbjct: 7 PSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAM 66
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + K MA + TY L+ LC + + LL MKSRG+ P ++++N +I
Sbjct: 67 ALFDK--MAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGG 124
Query: 126 LCKNGKVGRARSL---MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
LC+ G++ A + M+D P+ +T++ L+ K L +A+ +L++ S VPD
Sbjct: 125 LCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDN 184
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR----------FLK 225
T+T V++ LC RV DA E++EE +G V G C+ L
Sbjct: 185 TTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLG 244
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
E+ R+G P++ TY+ +I C+ G L A+D+F +M + +TY++LI G C G
Sbjct: 245 EVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSC---APTAITYNSLIGGYCRAG 301
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+D+ +++L M D + + Y +++ + + D+A E +QM KL P V
Sbjct: 302 DMDEAIRLLGKMVD--DNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 359
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ + G C +G +EDA +++ G P + Y+C++ YC+ +VR+A EL+ +
Sbjct: 360 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFR 419
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPLIKALCEK 462
G++P T+N +++G CR G AL+ +++ + G G P S Y+ ++ ALC
Sbjct: 420 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ-LNSEG-GPCPTSVAMYAIILDALCRD 477
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSF 512
G A +M+ +G +P T+ +++ +C + Q LL EM+ +
Sbjct: 478 GRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ-AHELLEEMIKY 528
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 212/449 (47%), Gaps = 55/449 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PPD + ++ GL +A + D V+ ++VS ++ + + + + + + +D AR
Sbjct: 146 PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARE 205
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL-HVMKSRGVKPNSVIYNTLIHS 125
++M+ G+ + TY+ L+ GLC R+ + LL + RG P+ V Y+T+I
Sbjct: 206 LV-EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264
Query: 126 LCKNGKVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
LCK G++ A + +M P +T++ LI YC+ ++ A+ LL K PDV+T
Sbjct: 265 LCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324
Query: 185 ITKVLELLCSVGRVMDAVEILEE-----------------SGEQGRLGKVKGGCRFLKEM 227
T ++ C +GR+ DA E+ ++ G G G+++ L+E+
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE-GRMEDALELLEEI 383
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R+GC P + TYN ++ YC++ + A ++ D + G N VTY+ L+ G C GR
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
D L+ L + ++ Y +L L R+ + D+A+++
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQF----------------- 486
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+++MI+ G VP + ++ A C+ + ++A EL++EM +G+
Sbjct: 487 ----------------YEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGH 530
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P T + V+S CR G + A +L E
Sbjct: 531 TPGPGTCDAVVSAYCRAGMIQKADELASE 559
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 219/439 (49%), Gaps = 24/439 (5%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGD-GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
M+ +G D T+A++++GL + ++ G LL ++ RG+ P+ V NT++ LC
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 131 KVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A +L M E N T+ LI CK L A+ LL S G P +
Sbjct: 61 DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQ---------------GRLGKVKGGCRFLKEMERKGC 232
V+ LC GR+ A+ + + + + G+++ + L+EM
Sbjct: 121 VIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+P+ T +++ S C +D A ++ +M G++ N +TY L+ GLC R+D+ +
Sbjct: 181 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFC 352
+L L E ++ G I Y++V+ GL + + +A++ ++M P A+ + I G+C
Sbjct: 241 LL-LGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM-SCAPTAITYNSLIGGYC 298
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G++++A R +M+++ P+V+ Y L+ A+C+ R+ +A EL ++M + P
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
TF +++ GLC +G + AL+L+EE R RG P Y+ ++ C+ + A L+
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITR---RGCPPTIYTYNCVVDGYCKSNQVRKAEELV 415
Query: 473 VQMVGKGILPDYLTWNSLL 491
+G +P+ +T+N L+
Sbjct: 416 ADFRSRGFVPNTVTYNILV 434
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 24/279 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P + ++I G RA +++ ++ + N P + + +++ K +D A
Sbjct: 285 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYEL 344
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M+A+ + D T+ L+ GLC R+ D +LL + RG P YN ++ C
Sbjct: 345 F-QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 403
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG-FVPDV 182
K+ +V +A L++D PN VT++IL+ C+ AL L++ S G P
Sbjct: 404 KSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTS 463
Query: 183 VTITKV-LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
V + + L+ LC GR DAV+ EE ++G + + + L+
Sbjct: 464 VAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLE 523
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
EM + G P T + ++S+YC G++ A ++ +++++
Sbjct: 524 EMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 246/536 (45%), Gaps = 60/536 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES+FI ++R G+A + + D+ + P+ K +N +L++LV +
Sbjct: 129 ESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVF 188
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ G+ YT+ ++MK C+ N V LL M G PNS+IY LIH+L +N
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSEN 248
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M EP+ TF+ +I CK + A L ++ F D +
Sbjct: 249 NRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308
Query: 186 TKVLELLCSVGRVMDAVEILEESGE---------------QGRLGKVK------------ 218
++ LC +G+V +A +L + GR + K
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 219 ------------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
G C+ FL EM +KG PNV TY ILI +C+ G + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASK 428
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
V N M G+S N V Y+ LI LC G+I D L++ M S +G K I +NS++YG
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM--SSKGCKPDIYTFNSLIYG 486
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + ++ +EAL + M E + V + I F ++ A + +M G +
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ Y+ LI A C+ + L+++M G P ++ N +++ CR G V AL+ +
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFL- 605
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
DM I RG P Y+ LI LC+ G FQ A L + KGI PD +T+N+L+
Sbjct: 606 RDM--IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLI 659
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 220/471 (46%), Gaps = 32/471 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ +I L +N+ +K + + P ++ FN ++ L K A
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ D LM GLC +V + M S+ PN+V+YNTLI+
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVV 348
Query: 129 NGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G+ A+ L+ EP+ TF+I+I CK+ LV+AL L++ GF P+V+
Sbjct: 349 SGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVI 408
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ C G +A +++ +G + GK++ + EM
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC P++ T+N LI C+ ++ AL ++ DM ++G+ N VTY+TLI I
Sbjct: 469 SSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELI 528
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
K++ M G YN ++ L + ++ L ++QM E++FP +
Sbjct: 529 QQADKLVGEMR--FRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCN 586
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I FC G V DA + MI+ G P++V Y+ LI+ C+ R +EA L +
Sbjct: 587 ILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
G P A T+NT++S C +G A +L+ +G+ G +P +S LI
Sbjct: 647 GIHPDAVTYNTLISRYCYEGLFNDACQLL---FKGVSNGFIPNEITWSILI 694
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 192/449 (42%), Gaps = 42/449 (9%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+ + + K + G + Y +L+ L KLL MK G ++
Sbjct: 73 DVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLF 132
Query: 120 NTLIHSLCKNGKVGRARSLMSDME-----EPN----DVTFSILICAYCKEENLVNALVLL 170
++ K G G+A L+ DM EP +V IL+ C + A +
Sbjct: 133 ILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKV----APNVF 188
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK 230
S G P V T V++ C V V A C L++M +
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSA-------------------CSLLRDMTKH 229
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC+PN Y +LI + E ++ A+ + +M + G + T++ +I GLC GRI +
Sbjct: 230 GCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEA 289
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
K+ M + I Y +++GL R + DEA L ++ P V + I G
Sbjct: 290 AKLHDRMLLRDFTADALIQGY--LMHGLCRMGKVDEARAMLSKIPN--PNTVLYNTLING 345
Query: 351 FCVDGNVEDAKR-CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+ V G E+AK + M+ G P+ ++ +I C++ + A E + EM G+ P
Sbjct: 346 YVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEP 405
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
T+ ++ G C+QG+ A K+V +G+ ++ Y+ LI ALC+ G Q A
Sbjct: 406 NVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV----GYNCLIGALCKDGKIQDA 461
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ +M KG PD T+NSL+ L +
Sbjct: 462 LQMYGEMSSKGCKPDIYTFNSLIYGLCKN 490
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 32/395 (8%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
P+ ++ T+I G GR D++ +++ F P FN ++D L K+ ++
Sbjct: 334 PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFE--PDAFTFNIMIDGLCKKGYLVSA 391
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M+ G + + TY IL+ G C + K+++ M ++G+ N+V YN LI +
Sbjct: 392 LEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+GK+ A + +M +P+ TF+ LI CK + + AL L G + +
Sbjct: 452 LCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIAN 511
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VT ++ RL ++ + + EM +GC + TYN
Sbjct: 512 TVTYNTLIHAFL-------------------RLELIQQADKLVGEMRFRGCPLDNITYNG 552
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI + C+TG + L + M + I + + + LI C G+++D L+ L+ M +
Sbjct: 553 LIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM--IQ 610
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVED 359
G I YNS++ GL + + EAL Q + + P AV + I +C +G D
Sbjct: 611 RGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFND 670
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
A + + + G +PN + + LI+ + + E
Sbjct: 671 ACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSE 705
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 182/440 (41%), Gaps = 104/440 (23%)
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-----------------GRLGKVKGGCRFLKEM 227
+ K+LEL V MD + E++G Q G +G+ K + LK+M
Sbjct: 64 LCKLLELPLDVPTSMD---LFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQM 120
Query: 228 ERKGCL------------------------------------PNVDTYNILISSYCETGV 251
+ +GC+ P +YN+++
Sbjct: 121 KDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNC 180
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
A +VF DM GIS T+ +++ C +D +L+ M +K G Y
Sbjct: 181 PKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDM--TKHGCVPNSIIY 238
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQM-- 367
+++ L N+ +EA++ L++M + P + I G C G + +A + D+M
Sbjct: 239 QMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLL 298
Query: 368 ----------------------IEEGGV-------PNVVIYDCLIHAYCQEERVREASEL 398
++E PN V+Y+ LI+ Y R EA +L
Sbjct: 299 RDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDL 358
Query: 399 M-KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+ K M G+ P A TFN ++ GLC++G + +AL+ ++E ++ +G P Y+ LI
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVK---KGFEPNVITYTILID 415
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVH 517
C++G F+ AS ++ M KG+ + + +N L+ L + ++ + +
Sbjct: 416 GFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD---------GKIQDALQMYG 466
Query: 518 ELSAKEKRCKLRSLNHLAHG 537
E+S+K + + + N L +G
Sbjct: 467 EMSSKGCKPDIYTFNSLIYG 486
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ N +++ + ++ A F R M+ G+ D TY L+ GLC R +
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRD-MIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM----SDMEEPNDVTFSILICAYC 158
L + ++++G+ P++V YNTLI C G A L+ S+ PN++T+SILI +
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFV 698
Query: 159 KEENLVNALVLLEKSFSF 176
K + +L ++ F
Sbjct: 699 KNNSDSEQFTILMGNWGF 716
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 355 GNVEDAK---RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG-HGYLPI 410
GNV + K + QM +EG V ++ ++ Y + +A+ L+ +M G + + P
Sbjct: 105 GNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPT 164
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
++N VL L GN V DM + RG P + ++KA C SA
Sbjct: 165 FKSYNVVLEILV-AGNCPKVAPNVFYDM--LSRGISPTVYTFGVVMKAFCMVNEVDSACS 221
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRS 530
LL M G +P+ + + L+ LS+ N + + ++ E+ +++
Sbjct: 222 LLRDMTKHGCVPNSIIYQMLIHALSEN---------NRVNEAMKLLEEMFLMGCEPDVQT 272
Query: 531 LNHLAHG---AGSVWLGLRIHD 549
N + HG AG + ++HD
Sbjct: 273 FNDVIHGLCKAGRIHEAAKLHD 294
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 219/448 (48%), Gaps = 42/448 (9%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM++ G D YTY ++ LC+ NR+ + K L M +R + PN V Y LI LCK G
Sbjct: 36 KMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGG 95
Query: 131 KVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+V A +L+S M + P VT++ LI CK E A LLE+ G +PD+ T T
Sbjct: 96 RVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C + DA+ + E+ +G + G++K M + G
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Query: 232 -CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C+PN TYN LIS +C G +D A+++ M G S + VTY TL+ G C R+DD
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
+L M +++G + + S++ GL REN+ +A+ L +M + P + +
Sbjct: 276 YDLLNQM--TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
G+C +E+A++ M+EE PNVV ++ +I C+ R EA EL++E
Sbjct: 334 DGYCRANQLEEARK---FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRC 390
Query: 408 LPIASTFNTVLSGLCRQGNVGTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
P + TV+ GLCR+ V A K++EE G LP S YS LI LC G
Sbjct: 391 NPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP------GCLPNSITYSTLITGLCNAG 444
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
A + KG +P+ T+N L+
Sbjct: 445 MLDRAR----GYIEKGCVPNIGTYNLLI 468
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 206/427 (48%), Gaps = 41/427 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + +++ V + R P+ +NS++ L K +
Sbjct: 79 PNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDL 137
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ SG D +TY L+ G C + + D ++ + +RG +P+ V Y+ LI LCK
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197
Query: 129 NGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A L M + PN VT++ LI +C+ + A+ LLE+ G PDVV
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T ++ C + R+ DA ++L + +G R ++ L EM
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
RK C P V TYN ++ YC L+ A F ++D N V+++ +IRGLC R
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARK-FMLEEMD-CPPNVVSFNIMIRGLCKVNRS 375
Query: 288 DDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALE-YLKQMEK--LFPR 340
+ +++++ E + R +P Y +V+ GL RE + DEA Y K +E+ P
Sbjct: 376 SEAMELVE------EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ S I G C G ++ A+ IE+G VPN+ Y+ LI A+ + R +A EL+
Sbjct: 430 SITYSTLITGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLD 485
Query: 401 EMTGHGY 407
+M G+
Sbjct: 486 DMVQRGF 492
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 27/363 (7%)
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VT++ LI CK + L AL+ L K S GF PDV T T V+ LC R+ +A + LEE
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+ + G+V L +M RK C+P TYN LIS C+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
A D+ +M G + TY TLI G C + DD L++ + + G + + Y
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL--VARGFRPDVVTY 188
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ ++ GL +E + EA++ +M K P V + I GFC G +++A ++M
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E G P+VV Y L++ +C+ R+ +A +L+ +MT G P TF +++ GLCR+ +
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A+ ++ E R + P Y+ ++ C + A +++ + P+ +++N
Sbjct: 309 DAVHILGEMRR---KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFN 363
Query: 489 SLL 491
++
Sbjct: 364 IMI 366
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR------------ 279
C + TY LI C+ L+ AL M G + TY +I
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 280 -----------------------GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
GLC GGR+D+ + +L M ++ YNS++
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM---RKKCVPTAVTYNSLIS 123
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL + + EA + L++M P + I GFC +DA R F+Q++ G P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGNVGTALKL 433
+VV Y CLI C+E R++EA +L M G +P T+N+++SG CR G + A+ L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+E R GS P Y+ L+ C+ A LL QM KG+ PD +T+ SL+
Sbjct: 244 LE---RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 121/296 (40%), Gaps = 65/296 (21%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S PD + T++ G + ++D + ++R +TP + F S++D
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD------------ 299
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
GLC NR+ D +L M+ + P YNT++
Sbjct: 300 -----------------------GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ ++ AR M +EE PN V+F+I+I CK A+ L+E++ PDV
Sbjct: 337 CRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM-ERKGCLPNVDTYNI 241
V T V++ LC R KV CR ++M E GCLPN TY+
Sbjct: 395 VMYTTVIDGLC-------------------REKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
LI+ C G+LD A G N TY+ LI R +D ++L M
Sbjct: 436 LITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE- 59
M + PP+ F +IRGL + ++ ++ + R P + ++ +++D L +E
Sbjct: 349 MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A YRK + G + TY+ L+ GLC + + +G PN Y
Sbjct: 409 KVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTY 464
Query: 120 NTLIHSLCKNGKVGRARSLMSDM 142
N LI + K + AR L+ DM
Sbjct: 465 NLLIDAFRKANRDEDARELLDDM 487
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/426 (31%), Positives = 206/426 (48%), Gaps = 30/426 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M V D ++Y IL+ GL ++ D L + GV P++V Y +LIH LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
AR L +DM P+ VT++++I A CK L A L++K G VPDVVT
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
V++ LC RV +A+ + EMER GC PN ++N +I C
Sbjct: 121 VMDGLCKSSRVEEALLL-------------------FNEMERLGCTPNRRSHNTIILGLC 161
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ +D A VF++M+ I + +Y LI GL G++++ K+ Q M DS G
Sbjct: 162 QQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS--GITPS 219
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFD 365
YN V++G+ DEALE K M R + IL C G +++A R
Sbjct: 220 AVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLK 279
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M ++G VP+VV Y LI C RV +A L+++M P T NT++ GLC+ G
Sbjct: 280 RMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAG 339
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ A ++++ + G P Y+ L+ C G + A LL MV +G+ P+ +
Sbjct: 340 RIKEAREVLDA---MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 486 TWNSLL 491
T+ +L+
Sbjct: 397 TYTALV 402
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/521 (26%), Positives = 232/521 (44%), Gaps = 64/521 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL +A +ND AR +
Sbjct: 8 PDSWSYGILIDGLAKAGKLND----------------------------------ARNLF 33
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K++ SGV Y L+ GLC+ N D +L M RG P+ V YN +I + CK
Sbjct: 34 -QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCK 92
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L+ M E P+ VT++ ++ CK + AL+L + G P+ +
Sbjct: 93 RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRS 152
Query: 185 ITKVLELLCSVGRV---------MDAVEILEESGEQG-------RLGKVKGGCRFLKEME 228
++ LC ++ M+A +I +S G + GK+ + + M
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRML 212
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TYN++I C LD AL++F M+ G + T++ LI C G++D
Sbjct: 213 DSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLD 272
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ ++L+ M D +G + Y++++ GL + D+A L+ M K P V ++
Sbjct: 273 EAFRLLKRMTD--DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G +++A+ D M+ G P+VV Y+ L+H +C+ + A EL+ +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ ++SGLC+ + A + + M+ G P Y+ LI C G
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQ-MK--SSGCAPNLFTYTALILGFCSAGQVD 447
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
L +MV GI PD++ + +L +C S ++ L +L
Sbjct: 448 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 221/513 (43%), Gaps = 27/513 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + ++I GL A +D + ++R PS +N ++D K +
Sbjct: 43 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 102
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM+ G D TY +M GLC ++RV + L + M+ G PN +NT+I LC+
Sbjct: 103 IKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 162
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K+ +A + +ME P+ ++ ILI K L A L ++ G P VT
Sbjct: 163 QSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT 222
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
V+ +C + +A+E+ + +G + GK+ R LK M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +P+V TY+ LIS C +D A + DM VT +TLI GLC GRI
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ ++L M S G + YN++++G R Q + A E L M L P V +
Sbjct: 343 EAREVLDAMVSS--GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C + +A F QM G PN+ Y LI +C +V +L EM G
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P + T+ + LC+ G AL+++ E + R G Y + L E G +
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESL-RSEAWGDEVYRFAVDGLLEAGKME 519
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
A + MV G LP SL+ +C S Q
Sbjct: 520 MALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 213/474 (44%), Gaps = 66/474 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + TV+ GL ++ + + + + + R TP+ + N+I+ L ++ ID A
Sbjct: 113 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M A + D ++Y IL+ GL ++ + +KL M G+ P++V YN +IH +C
Sbjct: 173 FHE-MEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMC 231
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L M P+ TF+ILI A+CK L A LL++ G VPDVV
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVV 291
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ LCS+ RV DA +LE+ M ++ C P V T N LI
Sbjct: 292 TYSTLISGLCSIARVDDARHLLED-------------------MVKRQCKPTVVTQNTLI 332
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G + A +V + M G S + VTY+TL+ G C G+ + ++L M G
Sbjct: 333 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM--VARG 390
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +++ GL + N+ EA QM+ P + ILGFC G V+
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE-------------------- 401
+ F +M+ G P+ V+Y L C+ R A E+++E
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510
Query: 402 -----------------MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
M G LP ++++GLC+ G G A ++EE M
Sbjct: 511 GLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 177/406 (43%), Gaps = 42/406 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P + VI G+ A +++ ++ + PS FN ++D K L AF
Sbjct: 218 PSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG-KLDEAFR 276
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M G D TY+ L+ GLC RV D LL M R KP V NTLIH LC
Sbjct: 277 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ AR ++ M + P+ VT++ L+ +C+ A LL + G P+VV
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ LC R+ +A C +M+ GC PN+ TY LI
Sbjct: 397 TYTALVSGLCKANRLPEA-------------------CGVFAQMKSSGCAPNLFTYTALI 437
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C G +D L +F +M GIS + V Y TL LC GR L+IL+ +S
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
Y + GL + + AL +++ M + P + + G C G
Sbjct: 498 EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG------ 551
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+GG V+ + + AY + R + A++ ++EM G GY
Sbjct: 552 --------QGGEARAVLEEIMDLAYGGKARGK-AAKFVEEMVGKGY 588
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/463 (30%), Positives = 219/463 (47%), Gaps = 30/463 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M V D ++Y IL+ GL ++ D L + GV P++V Y +LIH LC
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
AR L +DM P+ VT++++I A CK L A L++K G VPDVVT
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
V++ LC GRV +A+ + E G + K+ C+ EME +
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+ +Y ILI + G L+ A +F M GI+ + VTY+ +I G+C +D+ L
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
++ + M +G + +N ++ + + DEA LK+M + P V S I
Sbjct: 241 ELFKSMR--SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLIS 298
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C V+DA+ + M++ P VV + LIH C+ R++EA E++ M G P
Sbjct: 299 GLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP 358
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+NT++ G CR G A +L+ DM + RG P Y+ L+ LC+ A
Sbjct: 359 DVVTYNTLVHGHCRAGQTERARELL-SDM--VARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 470 MLLVQMVGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMV 510
+ QM G P+ T+ +L++ C + Q L L EMV
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDG-GLKLFGEMV 457
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 232/521 (44%), Gaps = 64/521 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL +A +ND A DL
Sbjct: 8 PDSWSYGILIDGLAKAGKLND---ARDLF------------------------------- 33
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K++ SGV Y L+ GLC+ N D +L M RG P+ V YN +I + CK
Sbjct: 34 -QKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCK 92
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L+ M E P+ VT++ ++ CK + AL+L + G P+ +
Sbjct: 93 RGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRS 152
Query: 185 ITKVLELLCSVGRV---------MDAVEILEESGEQG-------RLGKVKGGCRFLKEME 228
++ LC ++ M+A +I +S G + GK+ + + M
Sbjct: 153 HNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRML 212
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TYN++I C LD AL++F M+ G + T++ LI C G++D
Sbjct: 213 DSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMD 272
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ ++L+ M D +G + Y++++ GL + D+A L+ M K P V ++
Sbjct: 273 EAFRLLKRMTD--DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G +++A+ D M+ G P+VV Y+ L+H +C+ + A EL+ +M G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ ++SGLC+ + A + + M+ G P Y+ LI C G
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQ-MK--SSGCAPNLFTYTALILGFCSAGQVD 447
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
L +MV GI PD++ + +L +C S ++ L +L
Sbjct: 448 GGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 219/513 (42%), Gaps = 27/513 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + ++I GL A +D + ++R PS +N I+D K +
Sbjct: 43 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDL 102
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM+ G D TY +M GLC + RV + L + M+ G PN +NT+I LC+
Sbjct: 103 IKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 162
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K+ +A + +ME P+ ++ ILI K L A L + G P VT
Sbjct: 163 QSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVT 222
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
V+ +C + +A+E+ + +G + GK+ R LK M
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +P+V TY+ LIS C +D A + DM VT +TLI GLC GRI
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ ++L M S G + YN++++G R Q + A E L M L P V +
Sbjct: 343 EAREVLDAMVSS--GQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C + +A F QM G PN+ Y LI +C +V +L EM G
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P + T+ + LC+ G AL+++ E + R G Y + L + G +
Sbjct: 461 ISPDHVVYGTLAAELCKSGRSARALEILREGRESL-RSEAWGDEVYRFAVDGLLDAGKME 519
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
A + MV G LP SL+ +C S Q
Sbjct: 520 MALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 552
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 213/474 (44%), Gaps = 66/474 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + TV+ GL ++ + + + + + R TP+ + N+I+ L ++ ID A
Sbjct: 113 PDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQV 172
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M A + D ++Y IL+ GL ++ + +KL M G+ P++V YN +IH +C
Sbjct: 173 FHE-MEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMC 231
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L M P+ TF+ILI A+CK + A LL++ G VPDVV
Sbjct: 232 LAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVV 291
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ LCS+ RV DA +LE+ M ++ C P V T N LI
Sbjct: 292 TYSTLISGLCSIARVDDARHLLED-------------------MVKRQCKPTVVTQNTLI 332
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G + A +V + M G S + VTY+TL+ G C G+ + ++L M G
Sbjct: 333 HGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM--VARG 390
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +++ GL + N+ EA QM+ P + ILGFC G V+
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE-------------------- 401
+ F +M+ G P+ V+Y L C+ R A E+++E
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVD 510
Query: 402 -----------------MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
M G LP ++++GLC+ G G A ++EE M
Sbjct: 511 GLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 564
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 177/406 (43%), Gaps = 42/406 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P + VI G+ A +++ ++ + PS FN ++D K + AF
Sbjct: 218 PSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRG-KMDEAFR 276
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M G D TY+ L+ GLC RV D LL M R KP V NTLIH LC
Sbjct: 277 LLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLC 336
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ AR ++ M + P+ VT++ L+ +C+ A LL + G P+VV
Sbjct: 337 KAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVV 396
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ LC R+ +A C +M+ GC PN+ TY LI
Sbjct: 397 TYTALVSGLCKANRLPEA-------------------CGVFAQMKSSGCAPNLFTYTALI 437
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C G +D L +F +M GIS + V Y TL LC GR L+IL+ +S
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
Y + GL + + AL +++ M + P + + G C G
Sbjct: 498 EAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSG------ 551
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+GG V+ + + AY + R + A++ ++EM G GY
Sbjct: 552 --------QGGEARAVLEEIMDLAYGGKARGK-AAKFVEEMVGKGY 588
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 219/448 (48%), Gaps = 42/448 (9%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM++ G D YTY ++ LC+ NR+ + K L M +R + PN V Y LI LCK G
Sbjct: 36 KMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGG 95
Query: 131 KVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+V A +L+S M + P VT++ LI CK E A LLE+ G +PD+ T T
Sbjct: 96 RVDEAVALLSKMRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTT 155
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C + DA+ + E+ +G + G++K M + G
Sbjct: 156 LITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG 215
Query: 232 -CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C+PN TYN LIS +C G +D A+++ M G S + VTY TL+ G C R+DD
Sbjct: 216 SCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDA 275
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
+L M +++G + + S++ GL REN+ +A+ L +M + P + +
Sbjct: 276 YDLLNQM--TRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTIL 333
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
G+C +E+A++ M+EE PNVV ++ +I C+ R EA EL++E
Sbjct: 334 DGYCRANQLEEARK---FMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRC 390
Query: 408 LPIASTFNTVLSGLCRQGNVGTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
P + TV+ GLCR+ V A K++EE G LP S YS L+ LC G
Sbjct: 391 NPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEP------GCLPNSITYSTLVTGLCNAG 444
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
A + KG +P+ T+N L+
Sbjct: 445 MLDRAR----GYIEKGCVPNIGTYNLLI 468
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 206/427 (48%), Gaps = 41/427 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + +++ V + R P+ +NS++ L K +
Sbjct: 79 PNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDL 137
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ SG D +TY L+ G C + + D ++ + +RG +P+ V Y+ LI LCK
Sbjct: 138 LEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK 197
Query: 129 NGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A L M + PN VT++ LI +C+ + A+ LLE+ G PDVV
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T ++ C + R+ DA ++L + +G R ++ L EM
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
RK C P V TYN ++ YC L+ A F ++D N V+++ +IRGLC R
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARK-FMLEEMD-CPPNVVSFNIMIRGLCKVNRS 375
Query: 288 DDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALE-YLKQMEK--LFPR 340
+ +++++ E + R +P Y +V+ GL RE + DEA Y K +E+ P
Sbjct: 376 SEAMELVE------EARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ S + G C G ++ A+ IE+G VPN+ Y+ LI A+ + R +A EL+
Sbjct: 430 SITYSTLVTGLCNAGMLDRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLD 485
Query: 401 EMTGHGY 407
+M G+
Sbjct: 486 DMVQRGF 492
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 175/363 (48%), Gaps = 27/363 (7%)
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VT++ LI CK + L AL+ L K S GF PDV T T V+ LC R+ +A + LEE
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+ + G+V L +M RK C+P TYN LIS C+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
A D+ +M G + TY TLI G C + DD L++ + + G + + Y
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL--VARGFRPDVVTY 188
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ ++ GL +E + EA++ +M K P V + I GFC G +++A ++M
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E G P+VV Y L++ +C+ R+ +A +L+ +MT G P TF +++ GLCR+ +
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A+ ++ E R + P Y+ ++ C + A +++ + P+ +++N
Sbjct: 309 DAVHILGEMRR---KSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM--DCPPNVVSFN 363
Query: 489 SLL 491
++
Sbjct: 364 IMI 366
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 131/298 (43%), Gaps = 44/298 (14%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR------------ 279
C + TY LI C+ L+ AL M G + TY +I
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 280 -----------------------GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
GLC GGR+D+ + +L M ++ YNS++
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM---RKKCVPTAVTYNSLIS 123
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL + + EA + L++M P + I GFC +DA R F+Q++ G P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGNVGTALKL 433
+VV Y CLI C+E R++EA +L M G +P T+N+++SG CR G + A+ L
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+E R GS P Y+ L+ C+ A LL QM KG+ PD +T+ SL+
Sbjct: 244 LE---RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 65/296 (21%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S PD + T++ G + ++D + ++R +TP + F S++D
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD------------ 299
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
GLC NR+ D +L M+ + P YNT++
Sbjct: 300 -----------------------GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ ++ AR M +EE PN V+F+I+I CK A+ L+E++ PDV
Sbjct: 337 CRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM-ERKGCLPNVDTYNI 241
V T V++ LC R KV CR ++M E GCLPN TY+
Sbjct: 395 VMYTTVIDGLC-------------------REKKVDEACRVYRKMLEEPGCLPNSITYST 435
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
L++ C G+LD A G N TY+ LI R +D ++L M
Sbjct: 436 LVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDEDARELLDDM 487
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE- 59
M + PP+ F +IRGL + ++ ++ + R P + ++ +++D L +E
Sbjct: 349 MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A YRK + G + TY+ L+ GLC + + +G PN Y
Sbjct: 409 KVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTY 464
Query: 120 NTLIHSLCKNGKVGRARSLMSDM 142
N LI + K + AR L+ DM
Sbjct: 465 NLLIDAFRKANRDEDARELLDDM 487
>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 162/593 (27%), Positives = 263/593 (44%), Gaps = 107/593 (18%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
+P S P ES+ I + R L R ++ + L RF ++PS + +N++L + D
Sbjct: 94 LPPSRVPPLRESLLIPLFRSLAPGRALHLL---DQLPHRFAVSPSFRSYNTVLAAFARAD 150
Query: 61 IDL-ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ YR+ + V +T++I + LC R + +L M G P++V+Y
Sbjct: 151 CHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLY 210
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
T+IH+LC G V A +L+ +M + TF+ ++ C L A L+++
Sbjct: 211 QTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMI 270
Query: 176 FGFVPDVVTITKVLELLCSV-------------------------------GRVMDAVEI 204
G VP+ +T +L+ LC G++ +A E+
Sbjct: 271 RGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAEL 330
Query: 205 LEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
E G +G +LG++ + L+EME KG P++ TY IL+ S+C
Sbjct: 331 YETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCR 390
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G+ D+ + M G+S N Y+ +I +C R+DD ++ +Q M+ +G K I
Sbjct: 391 NGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMK--SQGYKPDI 448
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQ---MEKLFPRAVDR--------------------- 344
YN+++Y L NQ +EA EYL + E + A+
Sbjct: 449 CTYNTIIYHLCNNNQMEEA-EYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLAN 507
Query: 345 -------SLKILGF-------CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
SL I+ + C DGNV+ + +M E+G PN V Y+ LI C+
Sbjct: 508 DMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTR 567
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE----EDMRGIGRGSL 446
RVR+A EL KEM P T+NT+++GLC+ G + AL L+E ED+
Sbjct: 568 RVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHA------ 621
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
Y+ LI C+ ASMLL + V GI P+ TW ++ +++T
Sbjct: 622 -DIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRKST 673
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 187/427 (43%), Gaps = 47/427 (11%)
Query: 98 GDGFKLLHVMKSR-GVKPNSVIYNTLIHSL----CKNGKVGRARSLMS-DMEEPNDVTFS 151
G LL + R V P+ YNT++ + C + R ++ D P TFS
Sbjct: 117 GRALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFS 176
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
I A C+ AL +L G VPD V V+ LC+ G V +A +L+
Sbjct: 177 IAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLD----- 231
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
EM GC +V+T+N ++ C G L A + + M I G N
Sbjct: 232 --------------EMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNA 277
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL-----YRENQQDE 326
+TY L++GLC ++++ +L GR+ N VL+ + + E
Sbjct: 278 ITYGFLLKGLCLASQVEEARTML-----------GRVPELNVVLFNTVIGRCLLDGKLKE 326
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A E + M + P A S+ I G C G + A + +M ++G P++V Y L+H
Sbjct: 327 AAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLH 386
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
++C+ +++ M+ G +N ++ +C+ + A++ ++E M+ +G
Sbjct: 387 SFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQE-MKS--QG 443
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LL 503
P Y+ +I LC + A L ++ +G++ + +T+N+L+ L + +W +
Sbjct: 444 YKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAI 503
Query: 504 LLLNEMV 510
L N+MV
Sbjct: 504 SLANDMV 510
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/510 (29%), Positives = 245/510 (48%), Gaps = 33/510 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I GLG+ R + + + P++ +N+++D L K I+ A
Sbjct: 28 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y + G + TY+ L+ GLC + V G KLL M RG PN+V YNTL+++L
Sbjct: 88 YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF--GFVPD 181
G+ A SL+ M P +TF ++I CKE + A ++++ F G PD
Sbjct: 148 GQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPD 207
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
V+T VL+ LC R++DA + + + E+G ++ K+ + L
Sbjct: 208 VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 267
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M GC N TY+ ++ + G ++ A+ V M+ G + VTY+TLI G
Sbjct: 268 KMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQ 327
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
R+ + + +L+ M ++ G + Y ++ +GL R + DEA+E L M P A+
Sbjct: 328 RLREAVGLLREMLEA--GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMI-EEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
S + G C G V +A F++M +E P+V+ Y LI C+ ++ EA E ++ M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCE 461
G +P TF+ +++GLC G + T L+L RG+ RG +P Y+ L+ LC
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRIDTGLEL----FRGMAERGCVPDMVTYATLVDRLCR 501
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
A L QM G+ PD T +++
Sbjct: 502 ASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 210/447 (46%), Gaps = 29/447 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M+ + D TY L+ GL RV + + L +++G P V YNT+I LCK
Sbjct: 19 KQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKC 78
Query: 130 GKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A +L DM P VT+S LI C++ + LLE+ G P+ VT
Sbjct: 79 GRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVT 138
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L GR +A +LE+ G + G+++ R + EM
Sbjct: 139 YNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMF 198
Query: 229 --RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
G P+V T+N ++ C+ + A +VF G N VTY TLI GL +
Sbjct: 199 MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAK 258
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDR 344
+D+ L++L M + G + Y++V+ GL + + ++A+ L+QM P AV
Sbjct: 259 MDEALQLLAKM--VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 316
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I GF + +A +M+E G P+VV Y L H C+ R EA E++ M
Sbjct: 317 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P A T+++++ GLC+ G V AL E+ R P YS LI LC+ G
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR--DEVVAPHVIAYSALIDGLCKAGK 434
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A L +M+ G +PD +T++ L+
Sbjct: 435 IDEAYEFLERMIRAGRIPDVVTFSILI 461
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 169/378 (44%), Gaps = 60/378 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATD--LVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PP+ F +I+GL + I + D + ++P + FNS+LD L KE L
Sbjct: 168 PPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDA 227
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K+ + G + + TY+ L+ GL ++ + +LL M G + N+V Y+T++
Sbjct: 228 HNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 287
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L K G++ A ++ M + P+ VT++ LI + K + L A+ LL + GF P
Sbjct: 288 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------------------- 212
VVT T + LC GR +AVEIL+ +G
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFE 407
Query: 213 -----------------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ GK+ FL+ M R G +P+V T++ILI+ C+
Sbjct: 408 KMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA 467
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G +D+ L++F M G + VTY TL+ LC R+D+ + Q M +G S
Sbjct: 468 GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMR--SDGLSPDRS 525
Query: 310 PYNSVLYGLYRENQQDEA 327
++++GL N+ ++A
Sbjct: 526 TRRTMIHGLLEVNRDEDA 543
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 253/526 (48%), Gaps = 53/526 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +IR L R +D + R + +N+++ + +D AR
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR-- 133
Query: 68 YRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+++AS V D YTY +++GLC RVG+ LL M RG +P+ V Y L+ ++
Sbjct: 134 ---RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ G+A ++ +M PN VT++++I C+E + +A L + S+GF PD
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V+ T VL+ LC+ R D E+ EM K C+PN T+++L
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEEL-------------------FAEMMEKNCMPNEVTFDML 291
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ +C G+++ A+ V M G + N + +I +C GR+DD + L M
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM----- 346
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
GS G SP Y +VL GL R + ++A E LK+M + P V + I C G
Sbjct: 347 GSYG-CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A +QM E G N+V Y+ L++ +C + RV A EL M P T+ T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTT 462
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+GLC + A +L+ E ++ + P ++ L+ C+KG A L+ QM+
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQ---KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 477 GKGILPDYLTWNSLL-----ICLSQQTTWLLLLLLNEMVSFVMVVH 517
G P+ +T+N+LL C S++ LL L++ VS +V +
Sbjct: 520 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 565
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 240/518 (46%), Gaps = 34/518 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PD + +IRGL + + + D + PS+ + +L+ + K
Sbjct: 138 SMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 197
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M A G + TY +++ G+C RV D + L+ + S G +P++V Y T++
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC + L ++M E PN+VTF +L+ +C+ + A+ +LE+ G
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 317
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------F 223
+ V+ +C GRV DA + L G G +KG CR
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 377
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
LKEM RK C PN T+N I C+ G+++ A + M G N VTY+ L+ G C
Sbjct: 378 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 437
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GR+D L++ M K Y ++L GL + D A E L +M + P
Sbjct: 438 QGRVDSALELFYSMP-----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ + FC G +++A +QM+E G PN++ Y+ L+ ++ EA EL+
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHG 552
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKL--VEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ +G P T+++++ L R+ V A+K+ + +D+ G P + Y+ ++ AL
Sbjct: 553 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL-----GMRPKAVIYNKILLAL 607
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C++ A MV G +P+ LT+ +L+ L+ +
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 195/410 (47%), Gaps = 33/410 (8%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND 147
++ L + + + +L+ SRG P+ + LI +LC+ G+ A ++ E
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 148 V----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
++ L+ YC+ L A L+ S PD T T ++ LC GRV +A+
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L++ M +GC P+V TY +L+ + C++ A++V ++M+
Sbjct: 167 LLDD-------------------MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G + N VTY+ +I G+C GR+DD + L + S G + Y +VL GL +
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL--SSYGFQPDTVSYTTVLKGLCAAKR 265
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
++ E +M + P V + + FC G VE A + +QM G N + +
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+I+ C++ RV +A + + M +G P ++ TVL GLCR A +L++E +R
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR-- 383
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ P ++ I LC+KG + A+ML+ QM G + +T+N+L+
Sbjct: 384 -KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 32/407 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E F ++R R M+ ++ + +S + + N +++ + K+ +D A F
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M + G D +Y ++KGLC R D +LL M + PN V +NT I LC
Sbjct: 343 L-NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A L+ M E N VT++ L+ +C + + +AL L +S P+ +
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKPNTI 458
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +L LC+ R+ A E+L EM +K C PNV T+N+L+
Sbjct: 459 TYTTLLTGLCNAERLDAAAELL-------------------AEMLQKDCAPNVVTFNVLV 499
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S +C+ G++D A+++ M G + N +TY+TL+ G+ ++ L++L + G
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL--VSNG 557
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
I Y+S++ L RE++ +EA++ ++ L P+AV + +L C N + A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
F M+ G +PN + Y LI E+ ++E +L++E+ G L
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 253/526 (48%), Gaps = 53/526 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +IR L R +D + R + +N+++ + +D AR
Sbjct: 107 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR-- 164
Query: 68 YRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+++AS V D YTY +++GLC RVG+ LL M RG +P+ V Y L+ ++
Sbjct: 165 ---RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 221
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ G+A ++ +M PN VT++++I C+E + +A L + S+GF PD
Sbjct: 222 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 281
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V+ T VL+ LC+ R D E+ EM K C+PN T+++L
Sbjct: 282 VSYTTVLKGLCAAKRWEDVEEL-------------------FAEMMEKNCMPNEVTFDML 322
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ +C G+++ A+ V M G + N + +I +C GR+DD + L M
Sbjct: 323 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM----- 377
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
GS G SP Y +VL GL R + ++A E LK+M + P V + I C G
Sbjct: 378 GSYG-CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 436
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A +QM E G N+V Y+ L++ +C + RV A EL M P T+ T
Sbjct: 437 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTT 493
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+GLC + A +L+ E ++ + P ++ L+ C+KG A L+ QM+
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQ---KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 550
Query: 477 GKGILPDYLTWNSLL-----ICLSQQTTWLLLLLLNEMVSFVMVVH 517
G P+ +T+N+LL C S++ LL L++ VS +V +
Sbjct: 551 EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTY 596
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 240/518 (46%), Gaps = 34/518 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PD + +IRGL + + + D + PS+ + +L+ + K
Sbjct: 169 SMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 228
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M A G + TY +++ G+C RV D + L+ + S G +P++V Y T++
Sbjct: 229 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 288
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC + L ++M E PN+VTF +L+ +C+ + A+ +LE+ G
Sbjct: 289 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 348
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------F 223
+ V+ +C GRV DA + L G G +KG CR
Sbjct: 349 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 408
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
LKEM RK C PN T+N I C+ G+++ A + M G N VTY+ L+ G C
Sbjct: 409 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 468
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GR+D L++ M K Y ++L GL + D A E L +M + P
Sbjct: 469 QGRVDSALELFYSMP-----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 523
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ + FC G +++A +QM+E G PN++ Y+ L+ ++ EA EL+
Sbjct: 524 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHG 583
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKL--VEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ +G P T+++++ L R+ V A+K+ + +D+ G P + Y+ ++ AL
Sbjct: 584 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL-----GMRPKAVIYNKILLAL 638
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C++ A MV G +P+ LT+ +L+ L+ +
Sbjct: 639 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 676
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 189/396 (47%), Gaps = 33/396 (8%)
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV----TFSILICAY 157
+L+ SRG P+ + LI +LC+ G+ A ++ E ++ L+ Y
Sbjct: 95 RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY 154
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
C+ L A L+ S PD T T ++ LC GRV +A+ +L++
Sbjct: 155 CRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDD---------- 201
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
M +GC P+V TY +L+ + C++ A++V ++M+ G + N VTY+ +
Sbjct: 202 ---------MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVI 252
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
I G+C GR+DD + L + S G + Y +VL GL + ++ E +M +
Sbjct: 253 INGMCREGRVDDAREFLNRL--SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P V + + FC G VE A + +QM G N + + +I+ C++ RV +A
Sbjct: 311 NCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDA 370
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+ + M +G P ++ TVL GLCR A +L++E +R + P ++
Sbjct: 371 FQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR---KNCPPNEVTFNTF 427
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I LC+KG + A+ML+ QM G + +T+N+L+
Sbjct: 428 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 463
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 32/407 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E F ++R R M+ ++ + +S + + N +++ + K+ +D A F
Sbjct: 314 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 373
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M + G D +Y ++KGLC R D +LL M + PN V +NT I LC
Sbjct: 374 L-NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 432
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A L+ M E N VT++ L+ +C + + +AL L +S P+ +
Sbjct: 433 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKPNTI 489
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +L LC+ R+ A E+L EM +K C PNV T+N+L+
Sbjct: 490 TYTTLLTGLCNAERLDAAAELL-------------------AEMLQKDCAPNVVTFNVLV 530
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S +C+ G++D A+++ M G + N +TY+TL+ G+ ++ L++L + G
Sbjct: 531 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL--VSNG 588
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
I Y+S++ L RE++ +EA++ ++ L P+AV + +L C N + A
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
F M+ G +PN + Y LI E+ ++E +L++E+ G L
Sbjct: 649 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A R D+ G P+V + LI C+ R +A+ +++ G +NT+++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
G CR G + A +L+ P + Y+P+I+ LC++G A LL M+ +G
Sbjct: 153 GYCRYGQLDAARRLIA------SMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 206
Query: 480 ILPDYLTWNSLLICLSQQT 498
P +T+ LL + + T
Sbjct: 207 CQPSVVTYTVLLEAVCKST 225
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 253/526 (48%), Gaps = 53/526 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +IR L R +D + R + +N+++ + +D AR
Sbjct: 76 PDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAAR-- 133
Query: 68 YRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+++AS V D YTY +++GLC RVG+ LL M RG +P+ V Y L+ ++
Sbjct: 134 ---RLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAV 190
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ G+A ++ +M PN VT++++I C+E + +A L + S+GF PD
Sbjct: 191 CKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDT 250
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V+ T VL+ LC+ R D E+ EM K C+PN T+++L
Sbjct: 251 VSYTTVLKGLCAAKRWEDVEEL-------------------FAEMMEKNCMPNEVTFDML 291
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ +C G+++ A+ V M G + N + +I +C GR+DD + L M
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM----- 346
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
GS G SP Y +VL GL R + ++A E LK+M + P V + I C G
Sbjct: 347 GSYG-CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGL 405
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A +QM E G N+V Y+ L++ +C + RV A EL M P T+ T
Sbjct: 406 IEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTT 462
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+GLC + A +L+ E ++ + P ++ L+ C+KG A L+ QM+
Sbjct: 463 LLTGLCNAERLDAAAELLAEMLQ---KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMM 519
Query: 477 GKGILPDYLTWNSLL-----ICLSQQTTWLLLLLLNEMVSFVMVVH 517
G P+ +T+N+LL C S++ LL L++ VS +V +
Sbjct: 520 EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTY 565
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 239/518 (46%), Gaps = 34/518 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PD + +IRGL + + + D + PS+ + +L+ + K
Sbjct: 138 SMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFG 197
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M A G + TY +++ G+C RV D + L+ + S G +P++V Y T++
Sbjct: 198 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVL 257
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC + L ++M E PN+VTF +L+ +C+ + A+ +LE+ G
Sbjct: 258 KGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCA 317
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------F 223
+ V+ +C GRV DA + L G G +KG CR
Sbjct: 318 ANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKEL 377
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
LKEM RK C PN T+N I C+ G+++ A + M G N VTY+ L+ G C
Sbjct: 378 LKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCV 437
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GR+D L++ M K Y ++L GL + D A E L +M + P
Sbjct: 438 QGRVDSALELFYSMP-----CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ + FC G +++A +QM+E G PN++ Y+ L+ + EA EL+
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHG 552
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKL--VEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ +G P T+++++ L R+ V A+K+ + +D+ G P + Y+ ++ AL
Sbjct: 553 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDL-----GMRPKAVIYNKILLAL 607
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C++ A MV G +P+ LT+ +L+ L+ +
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 195/410 (47%), Gaps = 33/410 (8%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND 147
++ L + + + +L+ SRG P+ + LI +LC+ G+ A ++ E
Sbjct: 50 LRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGT 109
Query: 148 V----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
++ L+ YC+ L A L+ S PD T T ++ LC GRV +A+
Sbjct: 110 AVDVFAYNTLVAGYCRYGQLDAARRLIA---SMPVAPDAYTYTPIIRGLCDRGRVGEALS 166
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L++ M +GC P+V TY +L+ + C++ A++V ++M+
Sbjct: 167 LLDD-------------------MLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMR 207
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G + N VTY+ +I G+C GR+DD + L + S G + Y +VL GL +
Sbjct: 208 AKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL--SSYGFQPDTVSYTTVLKGLCAAKR 265
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
++ E +M + P V + + FC G VE A + +QM G N + +
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+I+ C++ RV +A + + M +G P ++ TVL GLCR A +L++E +R
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR-- 383
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ P ++ I LC+KG + A+ML+ QM G + +T+N+L+
Sbjct: 384 -KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALV 432
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 200/407 (49%), Gaps = 32/407 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+E F ++R R M+ ++ + +S + + N +++ + K+ +D A F
Sbjct: 283 PNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQF 342
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M + G D +Y ++KGLC R D +LL M + PN V +NT I LC
Sbjct: 343 L-NNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILC 401
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A L+ M E N VT++ L+ +C + + +AL L +S P+ +
Sbjct: 402 QKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---YSMPCKPNTI 458
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +L LC+ R+ A E+L EM +K C PNV T+N+L+
Sbjct: 459 TYTTLLTGLCNAERLDAAAELL-------------------AEMLQKDCAPNVVTFNVLV 499
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S +C+ G++D A+++ M G + N +TY+TL+ G+ + ++ L++L + G
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGL--VSNG 557
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
I Y+S++ L RE++ +EA++ ++ L P+AV + +L C N + A
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
F M+ G +PN + Y LI E+ ++E +L++E+ G L
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 246/545 (45%), Gaps = 66/545 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD ++ ++R L +A+ + + + + + P +N+++D L K
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+A + TY IL+ LC + +L VM + G +PNSVIY +LIH
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ A SL +M E P+ +T +++I CK N A E+ G P+VV
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ L +GRV +A I++ G +LG++ + L E+
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALD-VFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
++ PN+ Y+ L++ C+ G ++ LD +F K + + ++I GLC GR
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGL--YRENQQDEALEYLKQMEKL--FPRAV 342
+D+ +I Q M EG K + YN ++ GL REN+ + A L +EK+ P AV
Sbjct: 522 LDEACRIFQRM--VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAV 579
Query: 343 ---------------DRSLKIL--------------------GFCVDGNVEDAKRCFDQM 367
DR++K+L G C G V+ A F +M
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ +GG P+ Y C+I+ + +++ +A + EM G G P +T+ ++ LC GNV
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV 699
Query: 428 GTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
A E + RG L GS Y LI C+ +A L M+ +G +P +T
Sbjct: 700 DEAFHRFES---MLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756
Query: 487 WNSLL 491
SL
Sbjct: 757 SASLF 761
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 230/505 (45%), Gaps = 31/505 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +IR R R +D V +++ R P L F ++D L K +D
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211
Query: 69 RKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MMA G V D + +++ L RV + ++ M+ G P+++ YNT+I L
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLA 271
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G A ++ +M P +VT+ IL+ + CK L A L + GF P+ V
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ GR+ +A + +E E G + G + + +EM
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R GC PNV TY +I + G + +A + M G + VTY L+ G C GR+
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL- 346
D+ ++L E K S + Y+S++ GL ++ L+ L + K +D L
Sbjct: 452 DEAAQLLD--ELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLC 509
Query: 347 --KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC--QEERVREASELMKEM 402
I+G C G +++A R F +M+ EG P+ Y+ LI+ C +E RV A L+ ++
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
GYLP A T+ + GLC+ G V A+K++EE RG Y+ L LC +
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE---ASSRGWNADVVAYTALCTGLCYQ 626
Query: 463 GGFQSASMLLVQMVGKGILPDYLTW 487
G A L +MV +G PD +
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAY 651
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 203/459 (44%), Gaps = 29/459 (6%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A +F+R +G Q D +TY LM L + + M G+ PN+ +N LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
S + + A + M+ +P+ TF IL+ CK A + + + GFV
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221
Query: 180 P-DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
P D T ++ L RV +A E+ + + G + G + +
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L M K C+P TY IL++S C+ G L+ A ++F M G N V Y +LI G
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GR+ + + M ++ G + + + ++ GL + ++A + ++M + P
Sbjct: 342 KSGRMKEACSLFDEMVEA--GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V + I G G V +A R MI G P+ V Y CL+ +C+ R+ EA++L+
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
E+ P ++++++GLC G+V L + E + PG +I LC
Sbjct: 460 ELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL--CCSIIVGLC 517
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
+ G A + +MV +G PD T+N L+ +C S++
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 202/487 (41%), Gaps = 59/487 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ ++I G ++ + + D + P + ++D L K A
Sbjct: 328 PNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKS 387
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++MM G + + TY +++GL RV + F+++ M + G P+SV Y L+ CK
Sbjct: 388 FEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCK 447
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALV-LLEKSFSFGFVPDVV 183
G++ A L+ ++++ PN +S L+ C ++ L L E+S + D
Sbjct: 448 LGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPG 507
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG------------------RLGKVKGGCRFLK 225
++ LC GR+ +A I + +G R +V+ L
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLH 567
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
++E+ G LP+ TY L C+ G +D A+ + + G + + V Y L GLC G
Sbjct: 568 DLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627
Query: 286 RIDDGLKILQLM-------------------------EDS--------KEGSKGRISPYN 312
++D + + Q M ED+ +G K ++ Y
Sbjct: 628 QVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYT 687
Query: 313 SVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+++ L DEA + M +L + I GFC V+ A + F+ MI
Sbjct: 688 ALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMIS 747
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G VP V L + + +A EL++EM G P A+TF +L GL + G
Sbjct: 748 RGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGK 807
Query: 430 ALKLVEE 436
LKLV+E
Sbjct: 808 LLKLVQE 814
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTL---IRGLCSGGRIDDGLKILQLMEDS------- 300
++ S ++ D+++DG SW+ + + G G + L+ L++ +
Sbjct: 50 LVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWA 109
Query: 301 --KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+ G + + YN ++ L E + ++M K + P ++ I F
Sbjct: 110 GEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRR 169
Query: 357 VEDAKRCFDQMIEEGGVPN----VVIYDCLIHAYCQE----------------------- 389
+DA CF+ M + P+ +++ DCL A E
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 390 ---------ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+RV+EA E+ +M G+ P A +NT++ GL + G+ ALK+++
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN---M 286
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + +P Y L+ +LC+ G + A L M G P+ + + SL+
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
Length = 913
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 239/476 (50%), Gaps = 24/476 (5%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDL-ARAFYRKKMMASGVQGDDYTYAILMKGLCL 93
L RF + PS + +N +L VL + D A A YR+ + V +T+ + + LC
Sbjct: 128 QLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCR 187
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD---MEEPNDV-T 149
R + LL M G P++V+Y T+IH+LC G V A +L+++ M DV T
Sbjct: 188 LGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNT 247
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F ++ C + A L+++ + G +P V+T +L+ LC V + +A +L
Sbjct: 248 FDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVP 307
Query: 210 EQG--RLGKVKGGC----------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
E V GGC + M KGC P+ TY+IL+ C+ G + SA+
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVR 367
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ +M+ G + N VTY ++ C G DD +L+ M S +G YN ++Y
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEM--SAKGLTLNSQGYNGMIYA 425
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L ++ + DEA+ +++M + P + I C + +E+A+ F+ ++EEG V N
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ Y+ +IHA ++ R ++A L KEM HG ++N ++ +C+ GNV +L L+E
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E +G P + Y+ LI LC++ + A L QM+ +G+ PD +T+N+L+
Sbjct: 546 EMAE---KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLI 598
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 232/493 (47%), Gaps = 26/493 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M H + PP F R L R ++ + ++R P ++ +++ L +
Sbjct: 165 MVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQG 224
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
A +M+ G D T+ +++G+C RV + +L+ M ++G P + Y
Sbjct: 225 GVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYG 284
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L+ LC+ + AR+++ + E N V F+ +I E L A L E G P
Sbjct: 285 FLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 344
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T + ++ LC +GR+ AV R L+EME+KG PNV TY
Sbjct: 345 DAHTYSILMHGLCKLGRIGSAV-------------------RLLREMEKKGFAPNVVTYT 385
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
I++ S+C+ G+ D + +M G++ N Y+ +I LC GR+D+ + ++Q M
Sbjct: 386 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS- 444
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+G I YN+++Y L Q +EA + + E + + + I DG +
Sbjct: 445 -QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 503
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA R +MI G +VV Y+ LI A C++ V + L++EM G P ++N ++
Sbjct: 504 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 563
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
S LC++ V AL+L ++ + +G P Y+ LI LC+ G +A LL ++ +
Sbjct: 564 SELCKERRVRDALELSKQM---LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 620
Query: 479 GILPDYLTWNSLL 491
+ PD +T+N L+
Sbjct: 621 NVHPDIITYNILI 633
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 163/367 (44%), Gaps = 24/367 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
PD + ++ GL + I V+ + + P++ + +L K + D RA
Sbjct: 344 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 403
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M A G+ + Y ++ LC R+ + L+ M+S+G P+ YNT+I+ LC
Sbjct: 404 L-EEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
N ++ A + ++ E N +T++ +I A ++ +A+ L ++ G DVV
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 522
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ +++ +C G V ++ +LEE E+G + +V+ K+M
Sbjct: 523 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 582
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G P++ TYN LI+ C+ G + +AL++ + + + + +TY+ LI C +
Sbjct: 583 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLL 642
Query: 288 DDGLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
DD +L + G + + + LY + D+ L ++ P DR
Sbjct: 643 DDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKGDDFQHSLGCVKPSCPAGKDRC 702
Query: 346 LKILGFC 352
+ G C
Sbjct: 703 ERKTGRC 709
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 243/505 (48%), Gaps = 28/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD T+I+ L RA + V + +S + P F +++ ++E A
Sbjct: 193 PDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRV 252
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ KMM +G T +L+ G C RV D + + G +P+ V YNT +H LC+
Sbjct: 253 KTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQ 312
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG V A +M M +P+ T++ +I K L A ++ + G +PD T
Sbjct: 313 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 372
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LCS R+ +A+++ E +G ++G G R +EM+
Sbjct: 373 FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 432
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC P+ TYNILI C G L +ALD+ +M+ +G + VTY+T+I LC RI+
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ ++ M D+ S+ ++ +N+++ GL + + D+A E ++QM E L P + +
Sbjct: 493 EAEEVFDQM-DAHGISRSAVT-FNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ +C G+++ A + M G +VV Y LI+ C+ R + A +L++ M G
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG-F 465
P +N V+ L R+ N+ AL L E M +G P + Y + + LC GG
Sbjct: 611 IRPTPKAYNPVIQSLFRRNNLRDALSLFRE-MTEVGEP--PDALTYKIVFRGLCRGGGPI 667
Query: 466 QSASMLLVQMVGKGILPDYLTWNSL 490
+ A LV+MV KG +P++ ++ L
Sbjct: 668 KEAFDFLVEMVNKGFMPEFSSFRML 692
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 144/535 (26%), Positives = 253/535 (47%), Gaps = 73/535 (13%)
Query: 16 TVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMM 73
+ + R R +D V + ++ F + ++N +L+VL + + L + Y +M
Sbjct: 129 SFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVY-NEMT 187
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+Q D T L+K LC ++V +L M S V P+ + TL+ + G +
Sbjct: 188 DRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIE 247
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A + + M E P VT ++LI YCK + +AL ++K + GF PD VT +
Sbjct: 248 AALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFV 307
Query: 190 ELLCSVGRVMDAVEILE---ESG----------------EQGRLGKVKGGCRFLKEMERK 230
LC G V A+++++ + G + G L + KG + +M +
Sbjct: 308 HCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG---IVNQMVDR 364
Query: 231 GCLPNVDTYNILISSYCETGVLDSALD--------------------------------- 257
GCLP+ T+N LI + C L+ ALD
Sbjct: 365 GCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLG 424
Query: 258 --VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+F +MK G + + VTY+ LI LCS G++ + L +L+ ME + G YN+++
Sbjct: 425 IRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESN--GCPRSTVTYNTII 482
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
L ++ + +EA E QM+ + AV + I G C ++DA +QM++EG
Sbjct: 483 DALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 542
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ + Y+ ++ YC++ +++A+++++ MT +G+ T+ T+++GLC+ G ALKL
Sbjct: 543 PSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL 602
Query: 434 VEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+RG+ +G P Y+P+I++L + + A L +M G PD LT+
Sbjct: 603 ----LRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTY 653
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 209/467 (44%), Gaps = 64/467 (13%)
Query: 37 VSRFNMTPSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
++R + PS ++ I+ L DL R+ M G + ++
Sbjct: 80 LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVRE-MRREGHEAGAGVVRSFVESYARLR 138
Query: 96 RVGDGFKLL-HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTF 150
R D L+ + + + GV+ ++ +YN L++ L + ++ S+ ++M +P+ VT
Sbjct: 139 RFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTL 198
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ LI A C+ + A+++LE+ S PD T T +++ +EE
Sbjct: 199 NTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ------------GFIEE--- 243
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G ++ R +M GC P T N+LI+ YC+ G ++ AL DG +
Sbjct: 244 ----GSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPD 299
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY+T + LC G + LK++ LM +EG + YN+V+ L +
Sbjct: 300 QVTYNTFVHCLCQNGHVSHALKVMDLM--LQEGHDPDVFTYNTVINCLSK---------- 347
Query: 331 LKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+G +++AK +QM++ G +P+ ++ LI A C +
Sbjct: 348 -----------------------NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQN 384
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ EA +L +E+T G P TFN +++ LC+ G+ ++L EE M+ G P
Sbjct: 385 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE-MKS--SGCAPDEV 441
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI LC G +A LL +M G +T+N+++ L +Q
Sbjct: 442 TYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQ 488
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 182/394 (46%), Gaps = 38/394 (9%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFND 261
EI+++ G G ++G ++EM R+G + SY D A+D V N
Sbjct: 94 EIIQKLGTAGAFDLMEG---LVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQ 150
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--EDSKEGSKGRISPYNSVLYGLY 319
+ G+ + Y+ L+ L G R +K+L+ + E + G + + N+++ L
Sbjct: 151 LNTFGVQADTAVYNHLLNVLAEGSR----MKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R +Q A+ L++M + P + + GF +G++E A R +M+E G P V
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRV 266
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+ LI+ YC+ RV +A +++ G+ P T+NT + LC+ G+V ALK+++
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++ G P Y+ +I L + G A ++ QMV +G LPD T+N+L++ L Q
Sbjct: 327 LQ---EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ 383
Query: 498 TTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG---AGSVWLGLRIH------ 548
N + + + EL+ K + + N L + G LG+R+
Sbjct: 384 ---------NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 434
Query: 549 -----DTTHTFIIDRRVEIGHVFCSSSSLKDVDT 577
+ T+ +ID +G + + LK++++
Sbjct: 435 GCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES 468
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%), Gaps = 13/262 (4%)
Query: 242 LISSYCETGVLDSALDVFND-MKIDGISWNFVTYDTLIRGLCSGGRID--DGLKILQLME 298
L+++ E ++AL + N + + + + Y+ +I+ L + G D +GL + E
Sbjct: 59 LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGL----VRE 114
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL--KILGFCVDGN 356
+EG + S + R + D+A++ ++ F D ++ +L +G+
Sbjct: 115 MRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGS 174
Query: 357 -VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
++ + +++M + G P+VV + LI A C+ +VR A +++EM+ H P +TF
Sbjct: 175 RMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFT 234
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T++ G +G++ AL++ + M G P + LI C+ G + A + +
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMME---TGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291
Query: 476 VGKGILPDYLTWNSLLICLSQQ 497
+ G PD +T+N+ + CL Q
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQN 313
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 24/251 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P + T+I L + I + + D + ++ S FN+++D L K + ID A
Sbjct: 472 PRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATE 531
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++M+ G+Q + TY ++ C + +L M + G + + V Y TLI+ L
Sbjct: 532 LI-EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+ A L+ M P ++ +I + + NL +AL L + G PD
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T V LC G G +K FL EM KG +P ++ +L
Sbjct: 651 LTYKIVFRGLCRGG------------------GPIKEAFDFLVEMVNKGFMPEFSSFRML 692
Query: 243 ISSYCETGVLD 253
G+ D
Sbjct: 693 AEGLLNLGMDD 703
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/522 (28%), Positives = 247/522 (47%), Gaps = 31/522 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + F +I+ L RA I + + + + ++P K F +++ ++E
Sbjct: 209 PDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI 268
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R++M+A+G + T +L+ G C R+ + + M + G +P+ +N+L++ LC+
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V A ++ M + P+ T++ LI CK + A+ +L + F P+ VT
Sbjct: 329 IGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVT 388
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEME 228
++ LC +V +A E+ +G L V +G C +EM+
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC P+ TYN+LI S C G L+ AL + +M+ G S N VTY+TLI G C RI+
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIE 508
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ +I ME +G + YN+++ GL + + +EA + + QM E L P +
Sbjct: 509 EAEEIFDEME--LQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ FC G+++ A M G P+ V Y LI + RV AS L++ + G
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG-F 465
+ T+N V+ L R+ A++L E M +G P + Y + + LC GG
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMME---KGDPPDAVTYKVVFRGLCSGGGPI 683
Query: 466 QSASMLLVQMVGKGILPDYLTWNSL---LICLSQQTTWLLLL 504
A LV+M KG LPD+ ++ L L LS + T + L+
Sbjct: 684 GEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLV 725
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 216/427 (50%), Gaps = 40/427 (9%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHV----MKSRGVKPNSVIYNTLIHSLCKNGK 131
G++ D +TY L+ L G+ KL+ + M SRG+KP+ +N LI +LC+ +
Sbjct: 171 GLKLDAFTYNFLLNVLV----DGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQ 226
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A +M +M P++ TF+ L+ + +E N+ AL + E+ + G VT+
Sbjct: 227 IRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNV 286
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR+ + + F+ EM +G P+ T+N L++ C
Sbjct: 287 LVHGYCKEGRIEEVLS-------------------FIDEMSNEGFRPDRFTFNSLVNGLC 327
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + AL++ + M +G + TY++LI GLC G +++ ++IL M ++ S
Sbjct: 328 RIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQM-ILRDFSPNT 386
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
++ YN+++ L +ENQ +EA E + + + P + I G C+ N A F+
Sbjct: 387 VT-YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M +G P+ Y+ LI + C R+ EA L+KEM G T+NT++ G C+
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNK 505
Query: 426 NVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A ++ +E +++GI R + Y+ LI LC+ + A+ L+ QM+ +G+ PD
Sbjct: 506 RIEEAEEIFDEMELQGISRNVV----TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDK 561
Query: 485 LTWNSLL 491
T+NSLL
Sbjct: 562 FTYNSLL 568
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 169/346 (48%), Gaps = 47/346 (13%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+L + G+ G G ++ R L+EM+ GC T+ ILI SY + + D A+ V + M
Sbjct: 110 EVLRKLGKDGSFGSMR---RVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIM 166
Query: 263 KID-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS--KEGSKGRISPYNSVLYGLY 319
+ + G+ + TY+ L+ L G + LK+++++ G K ++ +N ++ L
Sbjct: 167 EEEFGLKLDAFTYNFLLNVLVDGNK----LKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R +Q A+ +++M L P + + GF +GN+ A R +QM+ G + V
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL---- 433
+ L+H YC+E R+ E + EM+ G+ P TFN++++GLCR G+V AL++
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342
Query: 434 ------------------------VEEDM----RGIGRGSLPGSGHYSPLIKALCEKGGF 465
VEE + + I R P + Y+ LI LC++
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM 509
+ A+ L + KGILPD T+NSL+ +CL+ L + L EM
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHR-LAMELFEEM 447
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 142/358 (39%), Gaps = 58/358 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
P+ + T+I L + + + + +++ + P + FNS++ L + + LA
Sbjct: 384 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMEL 443
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M G D++TY +L+ LC R+ + LL M+S G N V YNTLI C
Sbjct: 444 F-EEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFC 502
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KN ++ A + +ME N VT++ LI CK + A L+++ G PD
Sbjct: 503 KNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------------------RLG 215
T +L C G + A +I++ G R
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTV 622
Query: 216 KVKG-----------------------GCRFLKEMERKGCLPNVDTYNILISSYCETG-V 251
++KG R +EM KG P+ TY ++ C G
Sbjct: 623 QLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGP 682
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ A+D +M G +F ++ L GLC+ D +K++ + S +S
Sbjct: 683 IGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEVS 740
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 17/243 (6%)
Query: 261 DMKIDGISW-----NFVT----YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D +D + W NFV Y+ ++R L G ++LQ M+ + G + R +
Sbjct: 86 DSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHT--GCEIRRGTF 143
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK--ILGFCVDGN-VEDAKRCFDQMI 368
++ + DEA+ + ME+ F +D +L VDGN ++ + +M+
Sbjct: 144 LILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMV 203
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+V ++ LI A C+ ++R A +M+EM +G P TF T++ G +GN+
Sbjct: 204 SRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMN 263
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL++ E+ + G + + L+ C++G + + +M +G PD T+N
Sbjct: 264 GALRIREQ---MVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320
Query: 489 SLL 491
SL+
Sbjct: 321 SLV 323
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 246/494 (49%), Gaps = 33/494 (6%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV--KEDIDL 63
Q ++F V++ R +IN + +L + P + +N+ILD ++ K+ + +
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + K+M+ SGV + YTY IL++G C + G M+ G PN V YNT+I
Sbjct: 187 AEGIF-KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTII 245
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ CK K+G A L+ M PN ++++++I C+E + +LE+ +V
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD VT ++ C+VG A+ + EM + G PNV TY
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVL-------------------HAEMVKNGLSPNVVTY 346
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
LI+S C+ G L+ A++ + M+ G+ N TY TLI G G + +I++ M +
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNV 357
+ G I YN+++ G + ++A L++M E+ F P V S I GFC + +
Sbjct: 407 N--GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A + +M+ +G P+V Y LI C++ R+ E +L +EM G P T+ ++
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++ C +G++ AL+L +E I +G P Y+ LI ++ + A LL++++
Sbjct: 525 INAYCIEGDLDKALRLHDE---MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 478 KGILPDYLTWNSLL 491
+ +P+ +T+N+L+
Sbjct: 582 EESVPNEITYNTLI 595
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 245/538 (45%), Gaps = 83/538 (15%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV--KEDIDLARAFYR 69
S+F V++ R +I+ + L P + +N++LD + K +I A +
Sbjct: 135 SVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF- 193
Query: 70 KKMMASGVQGDDYTYAILMKGLCLT----------------------------------- 94
K+M+ S V + +TY IL++G CL
Sbjct: 194 KEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKL 253
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTF 150
++ DGF+LL M +G++PN + YN +I+ LC+ G++ ++++M + ++VT+
Sbjct: 254 RKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTY 313
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ LI YCKE N ALV+ + G P V+T T ++ +C G + A E
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE------- 366
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
FL +M +G PN TY L+ + + G ++ A V +M +G S +
Sbjct: 367 ------------FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPS 414
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY+ LI G C G++ D + +L+ M++ +G + Y++VL G R DEAL
Sbjct: 415 VVTYNALINGHCIAGKMVDAIAVLEDMKE--KGLTPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 331 LKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
++M + + P + S I GFC ++A FD+M+ G P+ Y LI+AYC
Sbjct: 473 KRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCM 532
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
E +++A +L EM G LP T++ +++GL +Q A +L+ ++ S+P
Sbjct: 533 EGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLL---LKLFYEESVPS 589
Query: 449 SGHYS---------------PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y LIK C KG A + M+ K PD +N ++
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMI 647
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 228/512 (44%), Gaps = 42/512 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G + R I+D + ++ + P+L +N +++ L +E +F
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFV 297
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D+ TY L+KG C + M G+ P+ + Y +LIHS+CK
Sbjct: 298 LTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCK 357
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA + M PN+ T++ L+ + ++ + A +L++ GF P VVT
Sbjct: 358 AGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVT 417
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ C G+++DA+ +LE+ E+G R V R ++M
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P+ TY+ LI +CE A D+F++M G+ + TY LI C G +
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+++ M + +G + Y+ ++ GL ++ + EA L ++ E+ P V
Sbjct: 538 KAIQLHNEMVE--KGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 347 ---------------KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
I GFC+ G + +A + F+ M+E+ P+ Y+ +IH +C+
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGD 655
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+R+A L KEM G+L T ++ L ++G V ++ +R L +
Sbjct: 656 IRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSC---ELSEAEQ 712
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
L++ +G +L +M G LP+
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 182/385 (47%), Gaps = 24/385 (6%)
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
V R+ D+ F +++ +Y + + AL ++ S + GF+P V++ VL+
Sbjct: 119 VFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDA 178
Query: 192 LCSVGRVMDAVEILEESGEQGRLGK--------VKGGC---------RFLKEMERKGCLP 234
R + E + + Q ++ ++G C RF ME+KGCLP
Sbjct: 179 TIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLP 238
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV TYN LI YC+ +D ++ M + G+ N ++Y+ +I GLC GR+ + +L
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
M +K G YN+++ G +E +AL +M + L P + + I C
Sbjct: 299 TEM--NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMC 356
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
GN+ A DQM G PN Y L+ + Q+ + EA ++KEM +G+ P
Sbjct: 357 KAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVV 416
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+N +++G C G + A+ ++ EDM+ +G P YS ++ C A +
Sbjct: 417 TYNALINGHCIAGKMVDAIAVL-EDMK--EKGLTPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQ 497
+MV KGI PD +T++SL+ +Q
Sbjct: 474 RKMVAKGIKPDTITYSSLIQGFCEQ 498
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 244/505 (48%), Gaps = 43/505 (8%)
Query: 4 SIQSPPDESIFITVIRGLGRA---RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-E 59
S S P S + +I G RA +M+ ++ A ++++R +P + N+IL +
Sbjct: 17 SDPSKPSNSTYGALITGFSRAGNSKMVLEI--ANEMLAR-RFSPDVITHNTILKAYCQIG 73
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+D A + +R KM S +TY IL+ GLC R+ + ++LL M + P++ +Y
Sbjct: 74 DLDRALSHFRGKMWCSPTA---FTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N LI LCK GK+ AR+++ M E P+ +T++ LI C+ L A L+EK
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKE 190
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR----------------LGKVKG 219
G PD V +L LC ++ + ++LEE E GR GK +
Sbjct: 191 SGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEE 250
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ L++M K C P+V TYN L+ +C+ +D A + DM + +TY TLI
Sbjct: 251 AGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIG 310
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
G R+ D ++++ M K G + YN +L GL + + +EA E L+ M +
Sbjct: 311 GFSRADRLADAYRVMEDM--FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDC 368
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S+ + G C G V+DA+ + M+E G PN+V ++ +I +C+ +V E +
Sbjct: 369 APDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHK 428
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+++ M P T++T++ G C+ + A ++ G P YS +++
Sbjct: 429 VLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL---------GISPDKASYSSMLE 479
Query: 458 ALCEKGGFQSASMLLVQMVGKGILP 482
LC G + A ++ M +G P
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQGCPP 504
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/511 (27%), Positives = 244/511 (47%), Gaps = 33/511 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I G + +++ K + + +TP +N++L+ L K++ +
Sbjct: 160 PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKL 219
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ +G + D ++Y ++ LC + + + K+L M + P+ V YN+L+ CK
Sbjct: 220 LEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCK 279
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K+ A L+ DM P +T++ LI + + + L +A ++E F G PD+VT
Sbjct: 280 VSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVT 339
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+L+ LC G++ +A E+LE E+ +LGKV L+ M
Sbjct: 340 YNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMML 399
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+GC PN+ T+N +I +C+ G +D V MK + + VTY TLI G C R+
Sbjct: 400 ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQ 459
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
D IL + D + Y+S+L GL + +EA E + M K P + +L
Sbjct: 460 DAFAILGISPDK--------ASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYAL 511
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C ++A + M E G PN+ Y LI+ C+ +RV +A ++ M G
Sbjct: 512 IIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKG 571
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+P +T+ +++ G C+ + A + + MR G P Y+ LI C+ G +
Sbjct: 572 CVPDVATYTSLIDGFCKINKMDAAYQCFKT-MRD--SGCEPDKLAYNILISGFCQSGNVE 628
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A ++ M+ KG PD T+ SL+ L+ +
Sbjct: 629 KAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 181/377 (48%), Gaps = 31/377 (8%)
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
R SD +P++ T+ LI + + N L + + + F PDV+T +L+ C +
Sbjct: 13 RERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQI 72
Query: 196 GRVMDAVEILEESGEQGRL-------------------GKVKGGCRFLKEMERKGCLPNV 236
G + A+ S +G++ ++ + L EM +K C P+
Sbjct: 73 GDLDRAL-----SHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA 127
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN LI+ C+ G +D+A +V M + +TY +LI G C +D+ K+++
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVD 354
M++S G YN++L GL ++NQ +E + L++M + P + + C
Sbjct: 188 MKES--GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G E+A + ++MIE+ P+VV Y+ L+ +C+ ++ EA L+++M G P T+
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ G R + A +++E+ + G P Y+ L+ LC+ G + A LL
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKA---GISPDLVTYNCLLDGLCKAGKLEEAHELLEV 362
Query: 475 MVGKGILPDYLTWNSLL 491
MV K PD +T++ L+
Sbjct: 363 MVEKDCAPDVVTYSILV 379
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 17/278 (6%)
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
G F +E P+ TY LI+ + G L++ N+M S + +T++T+++
Sbjct: 8 GYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILK 67
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM- 334
C G +D L + K SP Y +++GL + + DEA + L +M
Sbjct: 68 AYCQIGDLDRALSHFR--------GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMI 119
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ P A + I G C G ++ A+ M+E VP+V+ Y LI CQ +
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
EA +LM++M G P +N +L+GLC+Q + KL+EE + G P + Y+
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA---GREPDTFSYN 236
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ LCE G ++ A +L +M+ K PD +T+NSL+
Sbjct: 237 TVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLM 274
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 14/213 (6%)
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
SK S Y +++ G R LE +M + P + + + +C G+++ A
Sbjct: 20 SKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRAL 79
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + P Y LIH CQ +R+ EA +L+ EM P A+ +N +++GL
Sbjct: 80 SHFRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGL 137
Query: 422 CRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C+ G + A LK++ E R +P Y+ LI C+ A L+ +M
Sbjct: 138 CKMGKIDAARNVLKMMLE------RSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKES 191
Query: 479 GILPDYLTWNSLLICLSQQTTW-LLLLLLNEMV 510
G+ PD + +N+LL L +Q + LL EMV
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMV 224
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP S + +I GL ++ +K ++S P+L
Sbjct: 503 PPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNL--------------------- 541
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YTY+IL+ GLC T RV D +L VM +G P+ Y +LI C
Sbjct: 542 --------------YTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFC 587
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K+ A M EP+ + ++ILI +C+ N+ A+ +++ G PD
Sbjct: 588 KINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAA 647
Query: 184 T 184
T
Sbjct: 648 T 648
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 246/498 (49%), Gaps = 37/498 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
++ P + +I G +A + + + + F + P+ + +N +++ L K + +
Sbjct: 1 MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLT-S 58
Query: 65 RAFYRKKMMASG--VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNT 121
+A+ K M G V D TY+ ++ G C + ++L M +R G+ P+ V Y +
Sbjct: 59 KAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF-SF 176
++ LC++GK+ RA ++ +M+ EP+ TFS LI +C + AL L ++ S
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSS 178
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
+ PDVVT T +++ C G + A+ + L ME + C+PNV
Sbjct: 179 SWKPDVVTYTALIDGFCKSGNLEKAM-------------------KMLGVMEGRKCVPNV 219
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY+ L+ C+ G LD ALD+F M G N VTY TLI GLC+ ++D ++
Sbjct: 220 VTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDE 279
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M + YN++L G R + +EA + K+M + P + + + GFC
Sbjct: 280 M--TATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNA 337
Query: 355 GNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+E+A+ + M G+ P+VV Y ++ Y + +R EA+E ++EM P A T
Sbjct: 338 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 397
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+++++ GLC+ G V A+++++ + + P G ++ +I ALC G A LLV
Sbjct: 398 YSSLIDGLCKAGRVDHAMEVLKN---MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLV 454
Query: 474 QMVGKGILPDYLTWNSLL 491
M G+ P +T+ +LL
Sbjct: 455 AMAAHGLEPGMVTYTTLL 472
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 216/479 (45%), Gaps = 72/479 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PD + TVI G + ++ + ++V+R + P + + S++D L ++ +D A
Sbjct: 75 PDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACE 134
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL-HVMKSRGVKPNSVIYNTLIHS 125
R+ M GV+ D +T++ L+ G C +V + KL ++ S KP+ V Y LI
Sbjct: 135 MVRE-MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDG 193
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK+G + +A ++ ME PN VT+S L+ CK +L AL L + S G VP+
Sbjct: 194 FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPN 253
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VVT T ++ LC+ +V DA +L + EM C P+ +YN
Sbjct: 254 VVTYTTLIHGLCAAHKV-DAARLL------------------MDEMTATCCPPDTVSYNA 294
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ YC G ++ A +F +M + +TY L+RG C+ R+++ +L+ M+ +
Sbjct: 295 LLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK-TA 353
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
G + Y+ V+ G R + EA E++++M + P AV S I G C G V+
Sbjct: 354 AGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDH 413
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M+ + P+V ++ +I A C+ + EA +L+ M HG P T+ T+L
Sbjct: 414 AMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLE 473
Query: 420 ------------------------------------------GLCRQGNVGTALKLVEE 436
GLC+ + A+ +VEE
Sbjct: 474 GFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEE 532
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 16/288 (5%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C P V T+ I+I +C+ L AL F M+ + ++ N TY+ ++ GLC
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKI 348
++L+ M D K + ++ Y++V+ G ++ + D A E L++M + + P V + +
Sbjct: 62 EVLKEMRDGKSVAPDLVT-YSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE-MTGHGY 407
G C DG ++ A +M +G P+ + LI +C +V EA +L KE +T +
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI--GRGSLPGSGHYSPLIKALCEKGGF 465
P T+ ++ G C+ GN+ A+K M G+ GR +P YS L+ LC+ G
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMK-----MLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 235
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVS 511
A L +M KG +P+ +T+ +L+ +C + + LL++EM +
Sbjct: 236 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD-AARLLMDEMTA 282
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 162/353 (45%), Gaps = 28/353 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +I G ++ + +K ++ P++ ++S+L L K D+D A
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ M + G + TY L+ GLC ++V L+ M + P++V YN L+ C
Sbjct: 242 FRR-MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYC 300
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDV 182
+ G++ A+ L +M P+ +T++ L+ +C L A LLE + G PDV
Sbjct: 301 RLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 360
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT + V+ R ++A E ++E + + G+V LK
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKN 420
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M K P+V T+N +I + C G +D A + M G+ VTY TL+ G GR
Sbjct: 421 MVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 480
Query: 287 IDDGLKILQLMEDSKEGSKGRIS-----PYNSVLYGLYRENQQDEALEYLKQM 334
++ ++ ++M + S + +++++ GL + + D+A+ ++++
Sbjct: 481 MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 533
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 247/535 (46%), Gaps = 104/535 (19%)
Query: 3 HSIQSP-PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-- 59
H SP ++F V++ L R + + L +R P++ +N++LD L++
Sbjct: 123 HLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSS 182
Query: 60 ----DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
D D A +R M+ +GV + YTY ++++G+ + G + M+ G+ PN
Sbjct: 183 SNHRDYDDAERVFRD-MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPN 241
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDM--------------------------------E 143
V YNTLI + CK KV A +L+ M E
Sbjct: 242 VVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVE 301
Query: 144 E-------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
E P++VT++ L+ +CKE NL LVLL + G P+VVT T ++ +C G
Sbjct: 302 EMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAG 361
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ AVEI + +M +G PN TY LI +C+ G+++ A
Sbjct: 362 NLSRAVEIFD-------------------QMRVRGLRPNERTYTTLIDGFCQKGLMNEAY 402
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
V ++M + G S + VTY+ L+ G C GR+ + + IL+ M + G + Y++V+
Sbjct: 403 KVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE--RGLPPDVVSYSTVIA 460
Query: 317 GLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
G RE + +A QM+ ++M+E+G +P+
Sbjct: 461 GFCRERELGKAF----QMK-----------------------------EEMVEKGVLPDT 487
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y LI C ++++ EA +L +EM G P T+ ++++ C G + AL+L +E
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ RG LP + YS LI L +K + A LL+++ + +PD +T+N+L+
Sbjct: 548 ---MVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLI 599
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 198/451 (43%), Gaps = 42/451 (9%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M G+ D+ TY L+ G C + G LL M +G+ PN V Y TLI+ +CK
Sbjct: 301 EEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKA 360
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + RA + M PN+ T++ LI +C++ + A +L + GF P VVT
Sbjct: 361 GNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTY 420
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEMER 229
++ C +GRV +AV IL E+G V G CR +EM
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
KG LP+ TY+ LI C L A D+F +M G+ + VTY +LI C G +
Sbjct: 481 KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSK 540
Query: 290 GLKILQ------LMEDSKEGS--------KGRISPYNSVLYGLYRENQQDEALEYLKQME 335
L++ + D+ S K R +L L+ E + + Y +E
Sbjct: 541 ALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600
Query: 336 KLFP---RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
++V+ +K GFC+ G + +A R F M++ PN IY+ +IH + + V
Sbjct: 601 NCSNNEFKSVEGLVK--GFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNV 658
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A L E+ + ++ L R+G +L++ +R L +
Sbjct: 659 HKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSC---RLNDAKVA 715
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
L++ ++G + +L +M G+LPD
Sbjct: 716 KVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 65/377 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL--------------- 53
P+E + T+I G + ++N+ K + +PS+ +N+++
Sbjct: 380 PNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGI 439
Query: 54 -----------DVLVKEDI--------DLARAFYRKK-MMASGVQGDDYTYAILMKGLCL 93
DV+ + +L +AF K+ M+ GV D TY+ L++GLCL
Sbjct: 440 LRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCL 499
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
++ + F L M RG+ P+ V Y +LI++ C +G++ +A L +M + P++VT
Sbjct: 500 QQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVT 559
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+S+LI K+ A LL K F VPD VT ++E CS +VE
Sbjct: 560 YSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE-NCS-NNEFKSVE------ 611
Query: 210 EQGRLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
G VKG C R K M ++ PN YN++I + G + A +++
Sbjct: 612 -----GLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYM 666
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL-Y 319
+++ + + V L++ L G D+ ++LQ + S + +++ VL + +
Sbjct: 667 ELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVA---KVLVEVNF 723
Query: 320 RENQQDEALEYLKQMEK 336
+E D L L +M K
Sbjct: 724 KEGNMDAVLNVLTEMAK 740
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/494 (28%), Positives = 246/494 (49%), Gaps = 33/494 (6%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV--KEDIDL 63
Q ++F V++ R +IN + +L + P + +N+ILD ++ K+ + +
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + K+M+ SGV + YTY IL++G C + G M+ G PN V YNT+I
Sbjct: 187 AEGIF-KEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTII 245
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ CK K+G A L+ M PN ++++++I C+E + +LE+ +V
Sbjct: 246 DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD VT ++ C+VG A+ + EM + G PNV TY
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVL-------------------HAEMVKNGLSPNVVTY 346
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
LI+S C+ G L+ A++ + M+ G+ N TY TLI G G + +I++ M +
Sbjct: 347 TTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNV 357
+ G I YN+++ G + ++A L++M E+ F P V S I GFC + +
Sbjct: 407 N--GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A + +M+ +G P+V Y LI C++ R+ E +L +EM G P T+ ++
Sbjct: 465 EKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSL 524
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++ C +G++ AL+L +E I +G P Y+ LI ++ + A LL++++
Sbjct: 525 INAYCIEGDLDKALRLHDE---MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 478 KGILPDYLTWNSLL 491
+ +P+ +T+N+L+
Sbjct: 582 EESVPNEITYNTLI 595
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/545 (27%), Positives = 245/545 (44%), Gaps = 66/545 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD ++ ++R L +A+ + + + + + P +N+++D L K
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+A + TY IL+ LC + +L VM + G +PNSVIY +LIH
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ A SL +M E P+ +T +++I CK N A E+ G P+VV
Sbjct: 342 KSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVV 401
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ L +GRV +A I++ G +LG++ + L E+
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALD-VFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
++ PN+ Y+ L+ C+ G +++ LD +F K + + ++I GLC GR
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGR 521
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGL--YRENQQDEALEYLKQMEKL--FPRAV 342
+D+ +I Q M EG K + YN ++ GL REN+ + A L +E + P AV
Sbjct: 522 LDEACRIFQRM--VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAV 579
Query: 343 ---------------DRSLKIL--------------------GFCVDGNVEDAKRCFDQM 367
DR++K+L G C G V+ A F +M
Sbjct: 580 TYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEM 639
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ +GG P+ Y C+I+ + +++ +A + EM G G P +T+ ++ LC GNV
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV 699
Query: 428 GTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
A E + RG L GS Y LI C+ +A L M+ +G +P +T
Sbjct: 700 DEAFHRFEG---MLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVT 756
Query: 487 WNSLL 491
SL
Sbjct: 757 SASLF 761
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/505 (28%), Positives = 229/505 (45%), Gaps = 31/505 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +IR R R +D V +++ R P L F ++D L K +D
Sbjct: 152 PNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEV 211
Query: 69 RKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MMA G V D + +++ L RV + ++ M+ G P+++ YNT+I L
Sbjct: 212 FHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLA 271
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G A ++ +M P +VT+ IL+ + CK L A L + GF P+ V
Sbjct: 272 KAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSV 331
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ GR+ +A + +E E G + G + + +EM
Sbjct: 332 IYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R GC PNV TY +I + G + +A + M G + VTY L+ G C GR+
Sbjct: 392 MRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRL 451
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL- 346
D+ ++L E K S + Y+S++ GL + L+ L + K +D L
Sbjct: 452 DEAAQLLD--ELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLC 509
Query: 347 --KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC--QEERVREASELMKEM 402
I+G C G +++A R F +M+ EG P+ Y+ LI+ C +E RV A L+ ++
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
GYLP A T+ + GLC+ G V A+K++EE RG Y+ L LC +
Sbjct: 570 EMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE---ASSRGWNADVVAYTALCTGLCYQ 626
Query: 463 GGFQSASMLLVQMVGKGILPDYLTW 487
G A L +MV +G PD +
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAY 651
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 202/459 (44%), Gaps = 29/459 (6%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A +F+R +G Q D +TY LM L + + M G+ PN+ +N LI
Sbjct: 102 AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILI 161
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
S + + A + M+ +P+ TF IL+ CK A + + + GFV
Sbjct: 162 RSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFV 221
Query: 180 P-DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
P D T ++ L RV +A E+ + + G + G + +
Sbjct: 222 PPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK 281
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L M K C+P TY IL++S C+ G L+ A ++F M G N V Y +LI G
Sbjct: 282 VLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFA 341
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GR+ + + M ++ G + + + ++ GL + ++A + ++M + P
Sbjct: 342 KSGRMKEACSLFDEMVEA--GYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPN 399
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V + I G G V +A R MI G P+ V Y CL+ +C+ R+ EA++L+
Sbjct: 400 VVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLD 459
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
E+ P +++++ GLC G+V L + E + PG +I LC
Sbjct: 460 ELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGL--CCSIIVGLC 517
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
+ G A + +MV +G PD T+N L+ +C S++
Sbjct: 518 KTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 197/474 (41%), Gaps = 68/474 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD +I GL ++ K+ + + R P++ + +I+ L K +A AF
Sbjct: 363 PDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG-RVANAFR 421
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M+A G D TY L+ G C R+ + +LL + PN +Y++L+ LC
Sbjct: 422 IMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLC 481
Query: 128 KNG---------------------------------KVGRA-------RSLMSDMEEPND 147
G K GR + ++S+ +P+
Sbjct: 482 DGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDA 541
Query: 148 VTFSILICAYCK--EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
T++ILI C+ E + A LL G++PD VT T + LC +G V AV++L
Sbjct: 542 TTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKML 601
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
EE+ +G +V Y L + C G +D A+ +F +M
Sbjct: 602 EEASS-------------------RGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQ 642
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + + Y +I GL G +++D K M +G K ++ Y +++ L D
Sbjct: 643 GGAPDAAAYCCIINGLIKGKKLEDACKFFDEM--IGKGQKPTVATYTALVQALCHAGNVD 700
Query: 326 EALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
EA + M +L + I GFC V+ A + F+ MI G VP V L
Sbjct: 701 EAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASL 760
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ + +A EL++EM G P A+TF +L GL + G LKLV+E
Sbjct: 761 FDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 118/291 (40%), Gaps = 53/291 (18%)
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTL---IRGLCSGGRIDDGLKILQLMEDS------- 300
++ S ++ D+++DG SW+ + + G G + L+ L++ +
Sbjct: 50 LVTSIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGTAISFFRWA 109
Query: 301 --KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+ G + + YN ++ L E + ++M K + P ++ I F
Sbjct: 110 GEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRR 169
Query: 357 VEDAKRCFDQMIEEGGVPN----VVIYDCLIHAYCQE----------------------- 389
+DA CF+ M + P+ +++ DCL A E
Sbjct: 170 ADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229
Query: 390 ---------ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+RV+EA E+ +M G+ P A +NT++ GL + G+ ALK+++
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN---M 286
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + +P Y L+ +LC+ G + A L M G P+ + + SL+
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLI 337
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 155/579 (26%), Positives = 264/579 (45%), Gaps = 95/579 (16%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ESIF+ +++ G+A ++ D+ + + P+ K ++ +L++LV +
Sbjct: 147 ESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVF 206
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ GV +T+ I+MK LC+ N V LL M G PNS++Y TLIH+L +
Sbjct: 207 YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M P+ TF+ +I CK + +A L+++ GF PD +T
Sbjct: 267 NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTY 326
Query: 186 TKVLELLCSVGRVMDAVEILEE------------------SGE----QGRLGK------- 216
+L LC +G++ +A +IL + SG+ Q L +
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF 386
Query: 217 ----------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ G C+ + EM R+GC PNV TY IL++ C+ G+L+ A
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
V ++M G++ N V Y+ LI LC ++ L +L E +G K + YNS++YG
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLS--EMCTKGCKPDLFTYNSLIYG 504
Query: 318 LYRENQQDEALEYLKQM----------------EKLFPR-AVDRSLKIL----------- 349
L + ++ DEA M L R A ++L ++
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564
Query: 350 ---------GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
FC GN+E ++QMI +G + + + +I+ C+ +V A E ++
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+ G++P T+N+VL+GLC+ G + AL L + R G P + Y+ I C
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD---RLQVEGVRPDAFTYNTFISWQC 681
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
++G A + + + G +P LTWN L+ L +Q+
Sbjct: 682 KEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 228/490 (46%), Gaps = 32/490 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T+I L + +++ +K + + P ++ FN ++ L K +
Sbjct: 251 PNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKL 310
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G D+ TY L+ GLC ++ + K+L + PN+ I NTLI+
Sbjct: 311 VDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVM 366
Query: 129 NGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G++ A+S +++ +P+ T++IL+ CKE +L A L+ + G P+V+
Sbjct: 367 SGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVI 426
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ LC G + +A +L E +G R KV L EM
Sbjct: 427 TYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEM 486
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC P++ TYN LI C+ +D A +F++M +DG N VTY+TLI L G
Sbjct: 487 CTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAF 546
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
L ++ M G YN ++ + ++ LE +QM + L + +
Sbjct: 547 QKALTLVNDM--LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C G V++A I G VP++V Y+ +++ C+ R++EA L +
Sbjct: 605 IMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVE 664
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P A T+NT +S C++G V A RGI G +P + ++ L+ L ++
Sbjct: 665 GVRPDAFTYNTFISWQCKEGMVNDACLFF---YRGIENGFVPSNLTWNVLVYTLLKQSNQ 721
Query: 466 QSASMLLVQM 475
++ +L ++
Sbjct: 722 ENNFFVLDEL 731
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 193/438 (44%), Gaps = 42/438 (9%)
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPN----DVTFSI 152
KLL MK G+ I+ ++ K G+ G+A L+ DM EP D+ I
Sbjct: 133 KLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEI 192
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L+ C + A + S G P V T V++ LC V A +L + + G
Sbjct: 193 LVTGNCPQV----ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG 248
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ +V + L+EM GC+P+V T+N +I C+ + A
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ + M + G + +TY L+ GLC G++++ KIL + + N+++
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN------AILNTLIN 362
Query: 317 GLYRENQQDEALEYLKQMEKLF---PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G Q EA +L + F P ++ + G C +G++ A+ ++M G
Sbjct: 363 GYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCE 422
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PNV+ Y L++ C+ + EA ++ EM+ G + +N ++ LCR+ V AL L
Sbjct: 423 PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNL 482
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ E +G P Y+ LI LC+ A L M+ G + + +T+N+L+
Sbjct: 483 LSE---MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 494 LSQQTTWL-LLLLLNEMV 510
L ++ + L L+N+M+
Sbjct: 540 LLRRGAFQKALTLVNDML 557
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 27/295 (9%)
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V + K+LEL V +++ E R+G KG C D Y +
Sbjct: 80 VQLCKLLELPLDVPTLLEIFE---------RVGGQKGYCH------------TFDVYYVF 118
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ G + MK +GI + + +++ G+ +++L M +
Sbjct: 119 INKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR-AVY 177
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
+ Y+ VL L N A M + + P + + C+ V+ A
Sbjct: 178 LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M + G VPN ++Y LIHA Q+ +V EA +L++EM G +P TFN V+ G
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
LC+ + A KLV+ R + RG P + Y L+ LC G A +L+++
Sbjct: 298 LCKVNKIHDATKLVD---RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 20/195 (10%)
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL--PIASTFNTVLSGLCR 423
QM EEG V I+ ++ Y + + +A L+ +M YL P +++ VL L
Sbjct: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAV-YLCEPTFKSYDLVLEILV- 194
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
GN V DM + +G P + ++KALC SA LL M G +P+
Sbjct: 195 TGNCPQVATNVFYDM--LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252
Query: 484 YLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWL 543
+ + +L+ LSQ+ N++ + ++ E+ +++ N + HG V
Sbjct: 253 SIVYQTLIHALSQK---------NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN- 302
Query: 544 GLRIHDTTHTFIIDR 558
+IHD T ++DR
Sbjct: 303 --KIHDATK--LVDR 313
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 248/514 (48%), Gaps = 37/514 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I GL + + + + + +PS+ +N++LD L + L RA
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTG-KLERAMA 66
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M D ++ IL+ GLC ++ + M R PN + Y+ LI LCK
Sbjct: 67 LFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCK 125
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+V +A L+ M+ P+ +T++IL+ CKE + A +L + G VP++VT
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+L LC RV DA+ ++ ++M +GC PNV TY LI
Sbjct: 186 YNSLLHGLCRARRVSDALALM-------------------RDMTCRGCTPNVVTYGTLID 226
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G + A + DM G + + + Y+ LI GLC ++D+ + +L+ G
Sbjct: 227 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLR--RAVSGGI 284
Query: 305 KGRISPYNSVLYGLYRENQQDEA---LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
K + Y+SV+YGL R N+ DEA L Y+K P + S I G C G V++A
Sbjct: 285 KPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS-RGCPPDVILYSTLIDGLCKAGKVDEAF 343
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++ M +G +VV Y LI C+ RV EA L+ M G P T+N+++ GL
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ-MVGKGI 480
C ++ A++LVEE R P + Y+ LI +C SA++ Q M+ G+
Sbjct: 404 CDLNHLDEAIELVEEMERS---NCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGV 460
Query: 481 LPDYLTWNSLLICL--SQQTTWLLLLLLNEMVSF 512
+PD++T++ LL L S+ L L+L++MV
Sbjct: 461 IPDHITYSILLEGLKKSKDLHELRHLVLDQMVQL 494
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 204/407 (50%), Gaps = 29/407 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL +A ++ V+ + + +P + + ++D L KE A
Sbjct: 111 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 170
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ +G + TY L+ GLC RV D L+ M RG PN V Y TLI LCK
Sbjct: 171 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V A ++++DM + P+ + +++LI CK + + ++ LL ++ S G PDVVT
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ V+ LC R+ +A CR L ++ +GC P+V Y+ LI
Sbjct: 291 YSSVIYGLCRSNRLDEA-------------------CRLLLYVKSRGCPPDVILYSTLID 331
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G +D A D++ M DG + VTY TLI GLC GR+D+ +L M + G+
Sbjct: 332 GLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM--VRMGT 389
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK- 361
YNS++ GL N DEA+E +++ME+ P AV ++ I G C V+ A
Sbjct: 390 PPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAAL 449
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL-MKEMTGHGY 407
F +MI+ G +P+ + Y L+ + + + E L + +M GY
Sbjct: 450 DYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 496
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 143/282 (50%), Gaps = 9/282 (3%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M GC PNV TYN LI C+ D A ++F MK S + VTY+TL+ GL G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRS 345
++ + + Q M D + + +N ++ GL R + + ALE+ ++M ++ P + S
Sbjct: 61 LERAMALFQEMLDRRSHD---VISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYS 117
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C V A + M G P+V+ Y L+ C+E +V A E+++EM
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G +P T+N++L GLCR V AL L+ DM RG P Y LI LC+ G
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALM-RDM--TCRGCTPNVVTYGTLIDGLCKVGRV 234
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
+ A +L M+ KG PD + +N L+ +C + Q + LL
Sbjct: 235 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 276
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 170/338 (50%), Gaps = 38/338 (11%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P+VVT +++ LC A E+ E +K +E C P++
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEH----------------MKSVE---CSPSM 45
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN L+ TG L+ A+ +F +M +D S + ++++ L+ GLC G+I+ L+ +
Sbjct: 46 VTYNTLLDGLFRTGKLERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRK 104
Query: 297 MEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
M+D R SP Y+ ++ GL + N+ +A+E L+ M+ P + ++ + G
Sbjct: 105 MDD-------RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDG 157
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C + V A +M++ G VPN+V Y+ L+H C+ RV +A LM++MT G P
Sbjct: 158 LCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 217
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ T++ GLC+ G V A ++ DM I +G P Y+ LI LC+ +
Sbjct: 218 VVTYGTLIDGLCKVGRVKDACAML-ADM--IDKGGTPDLMIYNMLINGLCKADQVDESIA 274
Query: 471 LLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLL 506
LL + V GI PD +T++S++ +C S + LLL
Sbjct: 275 LLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 312
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
+PP + ++I+GL +++ ++ + + R N PS +N ++ + + E +D A
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAA 448
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGL 91
Y ++M+ +GV D TY+IL++GL
Sbjct: 449 LDYFQEMIDNGVIPDHITYSILLEGL 474
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/493 (29%), Positives = 232/493 (47%), Gaps = 39/493 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PDE+ F T++ G I ++ +S +P+ + ++VL+ L R
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPT----SVTVNVLINGYCKLGRVGD 284
Query: 68 ---YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
Y ++ +A G + D T++ + GLC V K+L +M G +P+ Y+T+I+
Sbjct: 285 ALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVIN 344
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC NG++ A+ +++ M + P+ TF+ LI A C E L AL L + G P
Sbjct: 345 CLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSP 404
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+V T ++ LC VG AV R +EM+ GC P+ TYN
Sbjct: 405 NVYTFNILINALCKVGDPHLAV-------------------RLFEEMKSSGCTPDEVTYN 445
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
ILI + C +G L ALD+ +M++ G + VTY+T+I GLC RI++ ++ M+ +
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
G +N+++ GL + D+A E + QM E L P V + + +C GN+
Sbjct: 506 GIGRNAIT--FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A M G +VV Y LI+ C+ R + A +L++ M G P +N V+
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVI 623
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG-FQSASMLLVQMVG 477
L R N AL L E M + G P + Y + + LC GG + A LV+M
Sbjct: 624 QSLFRGNNGRDALSLFRE-MTEV--GGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMAD 680
Query: 478 KGILPDYLTWNSL 490
G +P++ ++ L
Sbjct: 681 NGFIPEFSSFRML 693
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/467 (29%), Positives = 232/467 (49%), Gaps = 29/467 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P + FN+++D L + ++M + V D+ T+ LM+G + +L
Sbjct: 194 PDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRL 253
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCK 159
M G P SV N LI+ CK G+VG A + ++D EP+ VTFS + C+
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQ 313
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----- 214
++ +AL +L G PDV T + V+ LC+ G + +A I+ + + G L
Sbjct: 314 NGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTT 373
Query: 215 -----------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+++ +E+ KG PNV T+NILI++ C+ G A+ +F +MK
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G + + VTY+ LI LCS G++ L +L+ ME S G YN+++ GL + +
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVS--GCPQSTVTYNTIIDGLCKRRR 491
Query: 324 QDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+EA E QM+ + A+ + I G C ++DA DQMI EG PN V Y+
Sbjct: 492 IEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNS 551
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
++ YC++ + +A+++++ MT +G+ T+ T+++GLC+ ALKL +RG+
Sbjct: 552 ILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKL----LRGM 607
Query: 442 G-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+G P Y+P+I++L + A L +M G PD T+
Sbjct: 608 RMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTY 654
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 145/297 (48%), Gaps = 15/297 (5%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD-VFND 261
EI+ + G G +K + EM R+G + I SY + D A D V N
Sbjct: 95 EIIRKLGTAGAFDLMK---VLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQ 151
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ--LMEDSKEGSKGRISPYNSVLYGLY 319
+ + G+ N Y+ L+ L G +I K+L+ E S +G + + +N+V+ L
Sbjct: 152 LDMFGVQANTEVYNHLLTVLAEGSKI----KLLESAYTEMSSQGIEPDVVTFNTVIDALC 207
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R Q A+ L++M + P + + GF +G++E A R +M E G P V
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+ LI+ YC+ RV +A +++ G+ P TF+T ++GLC+ G+V ALK++
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
++ G P YS +I LC G + A ++ QMV G LPD T+N+L++ L
Sbjct: 328 LQ---EGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 10/222 (4%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F T+I GL A I+D + D + + P+ +NSIL K+ A + M
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT 573
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A+G + D TYA L+ GLC R KLL M+ +G+KP YN +I SL +
Sbjct: 574 ANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGR 633
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVN-ALVLLEKSFSFGFVPDVVTITKV 188
A SL +M E P+ T+ I+ C+ + A L + GF+P+ + +
Sbjct: 634 DALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRML 693
Query: 189 LELLCSVG---RVMDAVEILEESG--EQGRLGKVKGGCRFLK 225
E L ++G ++ A+E++ E + + ++G R K
Sbjct: 694 AEGLLNLGMDDYLIRAIELIVEKANFRESDISAIRGYLRIRK 735
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 117/307 (38%), Gaps = 59/307 (19%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + T+I GL + R I + + D
Sbjct: 473 PQSTVTYNTIIDGLCKRRRIEEAEEVFD-------------------------------- 500
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +G+ + T+ L+ GLC R+ D +L+ M S G++PN+V YN+++ C
Sbjct: 501 ---QMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYC 557
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +A ++ M E + VT++ LI CK AL LL G P
Sbjct: 558 KQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPK 617
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
V++ L DA+ + +EM G P+ TY I+
Sbjct: 618 AYNPVIQSLFRGNNGRDALSL-------------------FREMTEVGGPPDAFTYKIVF 658
Query: 244 SSYCE-TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C G + A D +M +G F ++ L GL + G D ++ ++L+ +
Sbjct: 659 RGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKAN 718
Query: 303 GSKGRIS 309
+ IS
Sbjct: 719 FRESDIS 725
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 10/261 (3%)
Query: 242 LISSYCETGVLDSALDVFNDM--KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+++ E ++AL + N + DG++ + Y+ +IR L + G D +K+L + E
Sbjct: 59 LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFD-LMKVL-VGEM 116
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL--KILGFCVDGN- 356
+EG + + S + R D+A + + +F + + +L +G+
Sbjct: 117 RREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSK 176
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ + + +M +G P+VV ++ +I A C+ + R A +++EM+ P +TF T
Sbjct: 177 IKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G +G++ AL+L R G P S + LI C+ G A + Q +
Sbjct: 237 LMEGFVEEGSIEAALRL---KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEI 293
Query: 477 GKGILPDYLTWNSLLICLSQQ 497
G PD +T+++ + L Q
Sbjct: 294 ADGFEPDRVTFSTFVNGLCQN 314
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 242/541 (44%), Gaps = 69/541 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD S F +IR L +A + + + + + + P K F +++ + E+ D+ A
Sbjct: 196 PPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFI-EEADVEGAL 254
Query: 68 YRKKMMAS----------------------------------GVQGDDYTYAILMKGLCL 93
K++M G D T+ L+ GLC
Sbjct: 255 RIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCR 314
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
T + G +++ M +G + + YN+LI LCK G++ A ++ M EPN VT
Sbjct: 315 TGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVT 374
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ LI CKE ++ A L S G +PDV T +++ LC A+E+ EE
Sbjct: 375 YNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEE-- 432
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
M+ KGC P+ TY+ILI S C L AL + +M++ G +
Sbjct: 433 -----------------MKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCAR 475
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N V Y+TLI GLC R+ D I ME G YN+++ GL + + +EA +
Sbjct: 476 NVVVYNTLIDGLCKNNRVGDAEDIFDQME--MLGVSRSSVTYNTLINGLCKSKRVEEAAQ 533
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+ QM E L P + + FC G+++ A M G P++V Y LI C
Sbjct: 534 LMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLC 593
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ RV AS+L++ + G + +N V+ LC++ A++L E M +G P
Sbjct: 594 KAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMME---KGDPP 650
Query: 448 GSGHYSPLIKALCEKGG-FQSASMLLVQMVGKGILPDYLTWNSL---LICLSQQTTWLLL 503
Y + + LC GG Q A V+M+ KGILP++ ++ L L LS + T + L
Sbjct: 651 DVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQL 710
Query: 504 L 504
+
Sbjct: 711 I 711
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 150/544 (27%), Positives = 256/544 (47%), Gaps = 66/544 (12%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKED 60
HS + P DES F+ + + ++ + L+ F + P + +N L +LVK +
Sbjct: 119 HSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKAN 178
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN---- 115
+ L + KM+A V D T+ IL++ LC +++ +L M + G++P+
Sbjct: 179 KLKLVETLH-SKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTF 237
Query: 116 -------------------------------SVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
SV N L++ LCK G++ A + + E
Sbjct: 238 TTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEEEG 297
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ VTF+ L+ C+ ++ L +++ GF DV T ++ LC +G + +AV
Sbjct: 298 FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAV 357
Query: 203 EILEES----------------GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
EIL G + V+ + + KG LP+V T+N LI
Sbjct: 358 EILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGL 417
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C T + A+++F +MK G + TY LI LCS R+ + L +L+ ME S G
Sbjct: 418 CLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS--GCAR 475
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ YN+++ GL + N+ +A + QME L +V + I G C VE+A +
Sbjct: 476 NVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLM 535
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
DQMI EG P+ Y ++ +CQ+ ++ A+++++ MT +G P T+ T++ GLC+
Sbjct: 536 DQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKA 595
Query: 425 GNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G V A KL +R + +G + Y+P+I+ALC++ + A L +M+ KG PD
Sbjct: 596 GRVDVASKL----LRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651
Query: 484 YLTW 487
+T+
Sbjct: 652 VITY 655
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 247/522 (47%), Gaps = 47/522 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA- 66
PPD + + L R D A L + P+ S+ L+++ LARA
Sbjct: 54 PPD----FSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQ---LARAG 106
Query: 67 ------FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR--GVKPNSVI 118
++M +S + D+ T+ I ++ ++ + L ++ R VKP++
Sbjct: 107 SFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRF 166
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFSILICAYCKEENLVNALVLLEKSF 174
YN + L K K+ +L S M P DV TF+ILI A CK L A+++LE
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVK 218
++G PD T T +++ V A+ I E E G + G+++
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE 286
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
RF+ E E G P+ T+N L++ C TG + L++ + M G + TY++LI
Sbjct: 287 EALRFIYEEE--GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLI 344
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GLC G ID+ ++IL M S++ ++ YN+++ L +EN + A E + +
Sbjct: 345 SGLCKLGEIDEAVEILHHMV-SRDCEPNTVT-YNTLIGTLCKENHVEAATELARVLTSKG 402
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + I G C+ N E A F++M E+G P+ Y LI + C E R++EA
Sbjct: 403 VLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEAL 462
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPL 455
L+KEM G +NT++ GLC+ VG A + ++ +M G+ R S+ Y+ L
Sbjct: 463 MLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVT----YNTL 518
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
I LC+ + A+ L+ QM+ +G+ PD T+ ++L QQ
Sbjct: 519 INGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQ 560
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 163/381 (42%), Gaps = 64/381 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
P+ + T+I L + + + +++ + P + FNS++ L + + ++A
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M G D++TY+IL++ LC R+ + LL M+ G N V+YNTLI LC
Sbjct: 430 F-EEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLC 488
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KN +VG A + ME + VT++ LI CK + + A L+++ G PD
Sbjct: 489 KNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKF 548
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV---------- 217
T T +L+ C G + A +I++ G + G+V
Sbjct: 549 TYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSV 608
Query: 218 -------------------------KGGCRFLKEMERKGCLPNVDTYNILISSYCETG-V 251
K R +EM KG P+V TY I+ C G
Sbjct: 609 QMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGP 668
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS-P 310
+ A+D +M GI F ++ L GLCS D ++++ ++ + KGR S
Sbjct: 669 IQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVME-----KGRFSQS 723
Query: 311 YNSVLYGLYRENQQDEALEYL 331
S++ G + + ++AL L
Sbjct: 724 ETSIIRGFLKIQKFNDALANL 744
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 247/533 (46%), Gaps = 67/533 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + ++ L RA +++ + + + + +N++++ L K++ ++ RA+
Sbjct: 43 PDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDE-NIERAYK 101
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ MAS G + D+ TY ++ GLC +V + + M SRG P+ V YN L+ +L
Sbjct: 102 LLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 161
Query: 128 KNGKVGRARSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K GKV A L M+ P+ +T++ LI +C+ E A+ L + + G++PD
Sbjct: 162 KEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPD 221
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VT +L L + +A E+ K+M GC PN TY+I
Sbjct: 222 TVTYNSILLGLARKSNMDEAEEMF-------------------KKMVDSGCAPNGATYSI 262
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++S +C G + L+++ +M S + + + +I LC ++DD K+L+ M SK
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM--SK 320
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
G+ + YN +L GL + N D+A E M P V S+ + G C V D
Sbjct: 321 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 380
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST------ 413
A+ FD+MIE VP+VV ++ L+ C+ ++ EA +L+ M+ H LP T
Sbjct: 381 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMH 440
Query: 414 -----------------------------FNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
N VL+GLCR+G + AL + ++ G
Sbjct: 441 GLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEF 500
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
S P Y+ L+ AL E G A QM G G PDY+ +N+L+ L +Q
Sbjct: 501 S-PDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQ 552
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 211/428 (49%), Gaps = 32/428 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + D TY+ ++ GLC T +V + +++ M +GV P+ Y ++ LC+ GK
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V A L M E N V ++ LI CK+EN+ A LLE+ S G+ PD +T
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L LC R+GKV +F M +G P+V YN L+ +
Sbjct: 121 ILSGLC-------------------RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY 161
Query: 248 ETGVLDSALDVFN--DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ G + A +F DM ++ + +TY+TLI G C + D+ +K+ + + +G
Sbjct: 162 KEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFK--DVIAKGYM 219
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
YNS+L GL R++ DEA E K+M P S+ + G C GN+
Sbjct: 220 PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLEL 279
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+++M E+ P+V++ + +I C+ ++V +A ++++EM+ G +P T+N +L GLC+
Sbjct: 280 YEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCK 339
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
V A +L + G P YS ++ LC+ A +L +M+ + ++PD
Sbjct: 340 TNLVDKAHELFS---TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPD 396
Query: 484 YLTWNSLL 491
+T+N L+
Sbjct: 397 VVTFNILM 404
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 229/485 (47%), Gaps = 34/485 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T++ GL R +++ + D + +P + +N +LD L KE + A
Sbjct: 113 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGL 172
Query: 68 YRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++ MA V D TY L+ G C + + KL + ++G P++V YN+++ L
Sbjct: 173 FKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGL 232
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+ + A + M + PN T+SI++ +C+ N+ L L E+ F PDV
Sbjct: 233 ARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDV 292
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ V+++LC +V DA ++LEE M + G +P+V TYNIL
Sbjct: 293 LLCNAVIDMLCKAKKVDDAHKVLEE-------------------MSKIGAVPDVVTYNIL 333
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ C+T ++D A ++F+ M +G + + V+Y ++ GLC ++ D + M + K
Sbjct: 334 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 393
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
+ +N ++ GL + + DEA + L M + + P V + + G C D ++A
Sbjct: 394 VPD--VVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEA 451
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG--YLPIASTFNTVL 418
R F M+E+G V +V+ ++ ++ C+E ++ +A K M + P T+ T++
Sbjct: 452 VRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLV 511
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ L G V A+ ++ G G P Y+ L+ L ++G A L M K
Sbjct: 512 NALIEAGRVDQAVDYFQQ---MTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568
Query: 479 GILPD 483
G L D
Sbjct: 569 GFLSD 573
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 236/501 (47%), Gaps = 27/501 (5%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +FI +I G R +K + F P+++I+N +LD L+ E+ + Y
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLY- 167
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G+ + +TY IL+K LC +RV KL M ++G P++V Y T++ SLCK
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
GK+ AR L + P+ ++ LI CKE + A+ LL + G P+VV+ + ++
Sbjct: 228 GKIDDARELAGRFK-PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
LC G V A + + +G GK+ K M + GC
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PNV YN LI C G L+ AL V + M+ G N TY LI G G + +
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
M G + + Y ++ L + + D+A +++M E P + + I G
Sbjct: 407 WNRM--ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGL 464
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +G VE A + ++M G +PN+ Y+ L+ A + + EA L +E+ P
Sbjct: 465 CGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNL 524
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T+NTVL G R G +G AL+L + + RG+ P S Y+ +I A C++G + A+ L
Sbjct: 525 VTYNTVLYGFSRAGMMGEALQLFG---KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581
Query: 472 LVQMVG-KGILPDYLTWNSLL 491
+ ++ K PD +T+ SL+
Sbjct: 582 VERVSSMKEWHPDIITYTSLI 602
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 214/429 (49%), Gaps = 28/429 (6%)
Query: 91 LCLTN---RVG---DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
+C+ N RVG K+ + + G KP IYN L+ +L K L ++M++
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172
Query: 145 ----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
PN T++IL+ A CK + + A L + + G PD VT T ++ LC G++ D
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232
Query: 201 AVEILEESGEQ-----------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
A E+ + G+++ + L EM G PNV +Y+ +I+S C +
Sbjct: 233 ARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G ++ A +F M + G N T+ LI+G G++ + L + +LM ++G + +
Sbjct: 293 GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM--IQDGCEPNVV 350
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN++++GL +EAL+ QM++ P S+ I GF G++ A +++M
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
I G PNVV Y C++ C+ +A+ L+++MT G P TFNT + GLC G V
Sbjct: 411 ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRV 470
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A+KL+E R G G LP Y+ L+ AL ++ A L ++ + + P+ +T+
Sbjct: 471 EWAMKLLE---RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527
Query: 488 NSLLICLSQ 496
N++L S+
Sbjct: 528 NTVLYGFSR 536
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 198/438 (45%), Gaps = 67/438 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-------- 59
PPD + T++ L +A I+D A +L RF PS+ ++N+++D + KE
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDD---ARELAGRFK--PSVPVYNALIDGMCKEGRIEVAIK 265
Query: 60 ----------------------------DIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+++LA A + +M G + +T+ L+KG
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF-AQMFLRGCDANIHTFTPLIKGC 324
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
+ ++ + L +M G +PN V YNTLIH LC NG + A + M+ PN
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
T+SILI + K +LV A + S G P+VVT T ++++LC A ++E+
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 208 SGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+G G+V+ + L+ M+ GCLPN+ TYN L+ +
Sbjct: 445 MTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A +F +++ + N VTY+T++ G G + + L++ + G+ Y
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG--KALVRGTAPDSITY 562
Query: 312 NSVLYGLYRENQ---QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
N++++ ++ + + +E + M++ P + + I G C N+E+A D+ I
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAI 622
Query: 369 EEGGVPNVVIYDCLIHAY 386
+G PN ++ L+ +
Sbjct: 623 NQGICPNFATWNALVRCF 640
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 12/256 (4%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY ++I +D + MK+DGI+ + +I G G + LK+ +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ G K + YN +L L EN+ M+K L P ++ + C +
Sbjct: 136 --GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A + F +M +G P+ V Y ++ + C+ ++ +A EL + P +N
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYN 248
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ G+C++G + A+KL+ E M G P YS +I +LC G + A L QM
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMM---DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305
Query: 476 VGKGILPDYLTWNSLL 491
+G + T+ L+
Sbjct: 306 FLRGCDANIHTFTPLI 321
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 29/266 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDI-DLA 64
P+ + + +I G ++ D+V A++ +R P++ + ++DVL K + D A
Sbjct: 382 PNVTTYSILIDGFAKS---GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQA 438
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ +KM G + T+ +KGLC RV KLL M+ G PN YN L+
Sbjct: 439 NSLV-EKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLD 497
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+L + K A L ++E +PN VT++ ++ + + + AL L K+ G P
Sbjct: 498 ALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAP 557
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK--------VKGGCR---------F 223
D +T ++ C G+V A +++E + G C F
Sbjct: 558 DSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAF 617
Query: 224 LKEMERKGCLPNVDTYNILISSYCET 249
L + +G PN T+N L+ + ++
Sbjct: 618 LDKAINQGICPNFATWNALVRCFFDS 643
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 213/442 (48%), Gaps = 30/442 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F T++ GL I D VK D + + P + +++I++ L K
Sbjct: 45 PNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQL 104
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM G + + Y+ ++ LC + + + L M +RG+ PN V Y++++H C
Sbjct: 105 LKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCN 164
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ A SL M E P+ VTF+IL+ KE ++ A + E G P+V T
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNT 224
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ CS + MD + + M RKGC P+V +YNILI
Sbjct: 225 YNALMDGYCSQSQ-MDEAQ------------------KLFNIMVRKGCAPSVRSYNILIK 265
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C++G +D A + +M ++ + VTY TL++G C GR D K+L+ M G
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSY--GL 323
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ VL GL ++ DEA E LK M+ K+ P ++ I G C G +E A+
Sbjct: 324 LPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARE 383
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + +G P+VV Y +I + EA EL ++M HG LP + T+N ++ G
Sbjct: 384 LFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFL 443
Query: 423 RQGNVGTALKLVEEDMRGIGRG 444
R G+ A +L+EE +GRG
Sbjct: 444 RNGDTSNAGRLIEE---MVGRG 462
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 211/426 (49%), Gaps = 34/426 (7%)
Query: 75 SGVQGDDYTYAILMKGLCLTNR--VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
S ++ D YT IL+ C +N F +L M G++PN V ++TL++ L K+
Sbjct: 4 SNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKI 63
Query: 133 GRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L +M EP+ +T+S +I CK + A+ LL+K G P+VV + +
Sbjct: 64 IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ LC + +A+E FL EM +G PNV TY+ ++ +C
Sbjct: 124 IDSLCKDKLITEAME-------------------FLSEMVNRGISPNVVTYSSILHGFCN 164
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G + A +F M + + VT++ L+ GL G I + + + M ++G + +
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM--IEKGVEPNV 222
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQ 366
+ YN+++ G ++Q DEA + M + RS IL G C G +++AK +
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M + P+ V Y L+ +CQ+ R ++A +L++EM +G LP T++ VL GLC+QG+
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342
Query: 427 VGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ A +L ++ + + P Y+ LI+ +C G ++A L + KGI PD +
Sbjct: 343 LDEAFEL----LKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVV 398
Query: 486 TWNSLL 491
T+ ++
Sbjct: 399 TYTVMI 404
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 171/357 (47%), Gaps = 28/357 (7%)
Query: 145 PNDVTFSILICAYC--KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ T +ILI +C ++ A +L F G P+ VT + +L L S +++DAV
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++ +E M + G P+V TY+ +I+ C+ G A+ + M
Sbjct: 68 KLFDE-------------------MVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ G N V Y T+I LC I + ++ L M + G + Y+S+L+G
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN--RGISPNVVTYSSILHGFCNLG 166
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ +EA KQM + P V ++ + G +G + +A+ F+ MIE+G PNV Y+
Sbjct: 167 RSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYN 226
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ YC + ++ EA +L M G P ++N ++ G C+ G + A L+ E
Sbjct: 227 ALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH- 285
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ P + YS L+K C+ G Q A LL +M G+LPD +T++ +L L +Q
Sbjct: 286 --KALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQ 340
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 10/210 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T+++G + D K + + + + P L ++ +LD L K+ L AF
Sbjct: 290 PDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQG-HLDEAFE 348
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M S ++ + + Y IL++G+C ++ +L + +G++P+ V Y +I L
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G A L DM PN T++++I + + + NA L+E+ GF D
Sbjct: 409 KGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSS 468
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGR 213
T ++L + + + + QGR
Sbjct: 469 T----FQMLSDLESRDEIISLFMHGSSQGR 494
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 155/579 (26%), Positives = 263/579 (45%), Gaps = 95/579 (16%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ESIF+ +++ G+A ++ D+ + + P+ K ++ +L++LV +
Sbjct: 147 ESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVF 206
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ GV +T+ I+MK LC+ N V LL M G PNS++Y TLIH+L +
Sbjct: 207 YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M P+ TF+ +I CK + +A L+++ GF PD +T
Sbjct: 267 NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTY 326
Query: 186 TKVLELLCSVGRVMDAVEILEE------------------SGE----QGRLGK------- 216
+L LC +G++ +A +IL + SG+ Q L +
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF 386
Query: 217 ----------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ G C+ + EM R+GC PNV TY IL++ C+ G+L+ A
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
V ++M G++ N V Y+ LI LC ++ L +L E +G K + YNS++YG
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLS--EMCTKGCKPDLFTYNSLIYG 504
Query: 318 LYRENQQDEALEYLKQM----------------EKLFPR-AVDRSLKIL----------- 349
L + ++ DEA M L R A ++L ++
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564
Query: 350 ---------GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
FC GN+E ++QMI +G + + + +I+ C+ +V A E ++
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+ G++P T+N+VL+GLC+ G + AL L + R G P + Y+ I C
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFD---RLQVEGVRPDAFTYNTFISWQC 681
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
++G A + + G +P LTWN L+ L +Q+
Sbjct: 682 KEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSN 720
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 228/490 (46%), Gaps = 32/490 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T+I L + +++ +K + + P ++ FN ++ L K +
Sbjct: 251 PNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKL 310
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G D+ TY L+ GLC ++ + K+L + PN+ I NTLI+
Sbjct: 311 VDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVM 366
Query: 129 NGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G++ A+S +++ +P+ T++IL+ CKE +L A L+ + G P+V+
Sbjct: 367 SGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVI 426
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ LC G + +A +L E +G R KV L EM
Sbjct: 427 TYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEM 486
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC P++ TYN LI C+ +D A +F++M +DG N VTY+TLI L G
Sbjct: 487 CTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAF 546
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
L ++ M G YN ++ + ++ LE +QM + L + +
Sbjct: 547 QKALTLVNDM--LFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCN 604
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C G V++A I G VP++V Y+ +++ C+ R++EA L +
Sbjct: 605 IMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVE 664
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P A T+NT +S C++G V A RGI G +P + ++ L+ L ++
Sbjct: 665 GVRPDAFTYNTFISWQCKEGMVNDACSFF---YRGIENGFVPSNLTWNVLVYTLLKQSNQ 721
Query: 466 QSASMLLVQM 475
++ +L ++
Sbjct: 722 ENNFFVLDEL 731
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 193/438 (44%), Gaps = 42/438 (9%)
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPN----DVTFSI 152
KLL MK G+ I+ ++ K G+ G+A L+ DM EP D+ I
Sbjct: 133 KLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEI 192
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L+ C + A + S G P V T V++ LC V A +L + + G
Sbjct: 193 LVTGNCPQV----ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG 248
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ +V + L+EM GC+P+V T+N +I C+ + A
Sbjct: 249 CVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDAT 308
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ + M + G + +TY L+ GLC G++++ KIL + + N+++
Sbjct: 309 KLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNN------AILNTLIN 362
Query: 317 GLYRENQQDEALEYLKQMEKLF---PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G Q EA +L + F P ++ + G C +G++ A+ ++M G
Sbjct: 363 GYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCE 422
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PNV+ Y L++ C+ + EA ++ EM+ G + +N ++ LCR+ V AL L
Sbjct: 423 PNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNL 482
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ E +G P Y+ LI LC+ A L M+ G + + +T+N+L+
Sbjct: 483 LSE---MCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 494 LSQQTTWL-LLLLLNEMV 510
L ++ + L L+N+M+
Sbjct: 540 LLRRGAFQKALTLVNDML 557
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 123/295 (41%), Gaps = 27/295 (9%)
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V + K+LEL V +++ E R+G KG C D Y +
Sbjct: 80 VQLCKLLELPLDVPTLLEIFE---------RVGGQKGYCH------------TFDVYYVF 118
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ G + MK +GI + + +++ G+ +++L M +
Sbjct: 119 INKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMR-AVY 177
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
+ Y+ VL L N A M + + P + + C+ V+ A
Sbjct: 178 LCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSA 237
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M + G VPN ++Y LIHA Q+ +V EA +L++EM G +P TFN V+ G
Sbjct: 238 CSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHG 297
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
LC+ + A KLV+ R + RG P + Y L+ LC G A +L+++
Sbjct: 298 LCKVNKIHDATKLVD---RMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 20/195 (10%)
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL--PIASTFNTVLSGLCR 423
QM EEG V I+ ++ Y + + +A L+ +M YL P +++ VL L
Sbjct: 137 QMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDMRAV-YLCEPTFKSYDLVLEILV- 194
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
GN V DM + +G P + ++KALC SA LL M G +P+
Sbjct: 195 TGNCPQVATNVFYDM--LSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPN 252
Query: 484 YLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWL 543
+ + +L+ LSQ+ N++ + ++ E+ +++ N + HG V
Sbjct: 253 SIVYQTLIHALSQK---------NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVN- 302
Query: 544 GLRIHDTTHTFIIDR 558
+IHD T ++DR
Sbjct: 303 --KIHDATK--LVDR 313
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 243/504 (48%), Gaps = 28/504 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ TV+RGL D D + R ++ P + FN++L L ++ + K++
Sbjct: 83 YCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVL 142
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + +T I ++GLC R+ + L+ M + + P+ V YNTL+ LCK+ KV
Sbjct: 143 KRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQ 201
Query: 134 RA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A R +M+ P+D T++ +I YCK + L A LL+ + GFVPD VT ++
Sbjct: 202 EAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLI 261
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMERKGCL 233
LC+ G V A+E+ E+ + VKG CR + EM GC
Sbjct: 262 NGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCH 321
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P++ TYNI+I+ C+ G + A V ND + G + T++T+I G C ++D L++
Sbjct: 322 PDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQL 381
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
++ M G YNSVL GL + + E E ++M + P A+ ++ I F
Sbjct: 382 VERM--WMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 439
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +E+A +M ++G VP+ + ++ LIH +C+ + A L +++ GY A
Sbjct: 440 CKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 499
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
TFN ++ + N+ A K+ E I +G P Y L+ C+ A +
Sbjct: 500 DTFNILIGAYSSKLNMQMAEKIFGE---MISKGYKPDLYTYRVLVDGSCKAANVDRAYVH 556
Query: 472 LVQMVGKGILPDYLTWNSLLICLS 495
L +MV KG +P T+ +L L+
Sbjct: 557 LAEMVSKGFVPSMATFGRVLNSLA 580
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 235/474 (49%), Gaps = 28/474 (5%)
Query: 40 FNMTPSLKIFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
F P+ +N+I+D LV D A Y +M+++GV D T+ + +K C+T R
Sbjct: 4 FGCPPAAPAYNAIMDALVNTAYHDQAHKVY-VRMLSAGVAPDARTHTVRIKSFCITGRPH 62
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
+LL + RG + Y T++ L +G AR L +M P+ TF+ ++
Sbjct: 63 VALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVL 122
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ--- 211
A C++ +++ + LL K G + T + LC GR+ +AV ++E
Sbjct: 123 HALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP 182
Query: 212 ------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+ KV+ ++L+ M +GC+P+ TYN +I YC+ +L A ++
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
D G + VTY +LI GLC+ G ++ L++ E + K + YNS++ GL
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFN--EAQAKDLKPDLVVYNSLVKGLC 300
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R+ AL+ + +M + P ++ I G C GN+ DA + I +G +P+V
Sbjct: 301 RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVF 360
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
++ +I YC+ ++ A +L++ M +G P A T+N+VL+GLC+ G + EE
Sbjct: 361 TFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE- 419
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I +G P + Y+ LI+ C+ + AS ++V+M G++PD +++N+L+
Sbjct: 420 --MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 202/447 (45%), Gaps = 55/447 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T++RGL + + + + + P +N+I+D K D+
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + G D TY L+ GLC V +L + +++ +KP+ V+YN+L+ LC+
Sbjct: 242 LKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCR 301
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A +M++M E P+ T++I+I CK N+ +A V++ + G++PDV T
Sbjct: 302 QGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 361
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ C ++ A++++E G + GK K +EM
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN TYNILI ++C+ L+ A V M DG+ + ++++TLI G C G +D
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ Q +++ +G +N +L G Y KL
Sbjct: 482 GAYLLFQKLDE--KGYSATADTFN-ILIGAYS--------------SKL----------- 513
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
N++ A++ F +MI +G P++ Y L+ C+ V A + EM G++
Sbjct: 514 -------NMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFV 566
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVE 435
P +TF VL+ L V A+ ++
Sbjct: 567 PSMATFGRVLNSLAMNHRVSEAVAIIH 593
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 145/290 (50%), Gaps = 15/290 (5%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G P+ T+ + I S+C TG AL + + G + Y T++RGL + G
Sbjct: 36 MLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGH 95
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDR 344
D + M + ++ +N+VL+ L Q+ + +E + K+ R +V++
Sbjct: 96 GYDARHLFDEM--LRRDVFPDVATFNNVLHALC---QKGDIMESGALLAKVLKRGMSVNK 150
Query: 345 ---SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
++ I G C G +E+A + M + P+VV Y+ L+ C++ +V+EA++ ++
Sbjct: 151 FTCNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRR 209
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G +P T+NT++ G C++ + A +L+++ I +G +P Y LI LC
Sbjct: 210 MMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD---AIFKGFVPDRVTYCSLINGLCA 266
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
+G + A L + K + PD + +NSL+ L +Q L L ++NEMV
Sbjct: 267 EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 316
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 255/517 (49%), Gaps = 61/517 (11%)
Query: 37 VSRFNMTPSLKIFNSILDVLV----KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+ R ++ P+L N++++ LV K + L++A + ++ GV+ + T+ IL+ G C
Sbjct: 165 MKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIF-SDVIKLGVKVNTNTFNILIYGCC 223
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
+ N++ + L+ MK P++V YNT++ LCK GK+ AR L+ DM+ PN
Sbjct: 224 IENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRN 283
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
TF+IL+ YCK L A +++ +PDV T ++ LC G++ +A + +E
Sbjct: 284 TFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEM 343
Query: 209 GEQGRLGKVK------GGC----------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
L V GC + +ME KG PN TYN+++ Y + G +
Sbjct: 344 ENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKM 403
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D+A + M+ G S + VT++TLI G C GR+ + +++ M S++G K N
Sbjct: 404 DNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEM--SRKGLKMNSVTLN 461
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L+ L E + D+A + L K F V I+G+ DG +A + +D+M E+
Sbjct: 462 TILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK 521
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
+P+++ Y+ +I C + ++ + + E+ G +P +T+NT++ G CR+G V A
Sbjct: 522 EIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKA 581
Query: 431 L----KLVEED-----------MRG-----------------IGRGSLPGSGHYSPLIKA 458
K+V++ +RG I +G + Y+ +I
Sbjct: 582 FQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISG 641
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
LC++ F+ A LL +M K + PD T+N++L L+
Sbjct: 642 LCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 244/515 (47%), Gaps = 59/515 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + F ++ G + + + + DL+++ N+ P + +N ++ L K D + AF
Sbjct: 280 PNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCK-DGKIDEAFR 338
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M + + D TY L+ G + GF+L+ M+ +GVKPN+V YN ++
Sbjct: 339 LKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYV 398
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A + + MEE P+ VTF+ LI YCK L A ++++ G + V
Sbjct: 399 KEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSV 458
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T+ +L LC ++ DA ++L + ++G F+ E+ +Y LI
Sbjct: 459 TLNTILHTLCGERKLDDAYKLLSSASKRGY---------FVDEV----------SYGTLI 499
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKE 302
Y + G A+ ++++MK I + +TY+T+I GLC G+ D + K+ +L+E
Sbjct: 500 MGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLE---S 556
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+++ G RE Q ++A ++ +M K P ++ + G C +G ++ A
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKA 616
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F+ I +G + V Y+ +I C+E+R EA +L+ EM P T+N +LS
Sbjct: 617 LKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSA 676
Query: 421 LCRQGNVGTALKLVEEDM-RGIGRGSL-----------------------PGSGHYSPLI 456
L G +K EE M R + +G L P S +S I
Sbjct: 677 LADAGR----MKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQI 732
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC +G ++ A ++ + KGI T+ SL+
Sbjct: 733 NELCTQGKYKDAMHMVQESTQKGITLHKSTYISLM 767
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 205/415 (49%), Gaps = 35/415 (8%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK---NGKVGRARSLMSDM----EEPND 147
NR ++ + MK +KPN + NTLI++L + V ++++ SD+ + N
Sbjct: 153 NRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNT 212
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
TF+ILI C E L A+ L+ K F PD V+ +L++LC G++ +A ++L
Sbjct: 213 NTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLL-- 270
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+M+ G LPN +T+NIL+S YC+ G L A V + M + +
Sbjct: 271 -----------------LDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNV 313
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ TY+ LI GLC G+ID+ ++ ME+ K + YN+++ G + + +
Sbjct: 314 LPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPD--VVTYNTLINGCFDCSSSLKG 371
Query: 328 LEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E + +ME + P AV ++ + + +G +++A +M E G P+ V ++ LI+
Sbjct: 372 FELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLING 431
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
YC+ R+ EA +M EM+ G + T NT+L LC + + A KL+ + RG
Sbjct: 432 YCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK---RGY 488
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
Y LI + G A L +M K I+P +T+N+++ +C S +T
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKT 543
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 206/442 (46%), Gaps = 44/442 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKE-DIDLA 64
PD + T+I G + +K +L+ + + P+ +N ++ VKE +D A
Sbjct: 350 PDVVTYNTLINGCFDC---SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 406
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
RK M SG D T+ L+ G C R+ + F+++ M +G+K NSV NT++H
Sbjct: 407 GNELRK-MEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILH 465
Query: 125 SLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+LC K+ A L+S + ++V++ LI Y K+ V A+ L ++ +P
Sbjct: 466 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIP 525
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
++T ++ LC G+ +++ L E E G R G+V+ +F
Sbjct: 526 SIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFH 585
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M +K P++ T NIL+ C G+LD AL +FN G + + VTY+T+I GLC
Sbjct: 586 NKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKE 645
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
R ++ +L ME+ K G YN++L L + EA E++ R V++
Sbjct: 646 DRFEEAFDLLAEMEEKKLGPD--CYTYNAILSALADAGRMKEAEEFM-------SRIVEQ 696
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYDCLIHAYCQEERVREASELMKEM 402
G D + KR + E PN V + I+ C + + ++A +++E
Sbjct: 697 -----GKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQES 751
Query: 403 TGHGYLPIASTFNTVLSGLCRQ 424
T G ST+ +++ GL ++
Sbjct: 752 TQKGITLHKSTYISLMEGLIKR 773
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-K 301
I +Y A +FN MK + N +T +TLI L + D K
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
G K + +N ++YG EN+ EA+ + +M+ FP V + + C G + +
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A+ M G +PN ++ L+ YC+ ++EA++++ M + LP T+N ++
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLC+ G + A +L +E M + LP Y+ LI + L+ +M GKG
Sbjct: 326 GLCKDGKIDEAFRLKDE-MENLKL--LPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKG 382
Query: 480 ILPDYLTWN 488
+ P+ +T+N
Sbjct: 383 VKPNAVTYN 391
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 246/514 (47%), Gaps = 44/514 (8%)
Query: 12 SIFITVIRGLG------RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
+ + TV+RGL AR + D + D+ P + FN++L L ++ +
Sbjct: 177 AAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF------PDVATFNNVLHALCQKGDVMES 230
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K++ G+ + +T I ++GLC R+ + L+ M + V P+ V YNTL+
Sbjct: 231 GALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRG 289
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+ KV A + M P+D T++ +I YCK L A LL+ + GFVPD
Sbjct: 290 LCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPD 349
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK---------VKGGCR---------F 223
VT ++ LC+ G + A+E+ E+ Q + K VKG CR
Sbjct: 350 RVTYCSLINGLCAEGDIERALELFNEA--QAKDLKPDLVVYNSLVKGLCRQGLILHALQV 407
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ EM +GC P++ TYNI+I+ C+ G + A V ND + G + T++TLI G C
Sbjct: 408 MNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCK 467
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
++D L++++ M G + YNSVL GL + + E E ++M + P A
Sbjct: 468 RLKLDSALQLVERM--WTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNA 525
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ ++ I FC +E+A +M ++G VP+ V ++ LIH +C+ + A L ++
Sbjct: 526 ITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQK 585
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
+ GY A TFN ++ + N+ A K+ E I +G P Y L+ LC+
Sbjct: 586 LDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGE---MISKGYKPDLYTYRILVDGLCK 642
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
A L +M+ KG +P T+ +L L+
Sbjct: 643 AANVDRAYAHLAEMISKGFVPSMATFGRMLNLLA 676
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 234/505 (46%), Gaps = 61/505 (12%)
Query: 9 PD--ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLAR 65
PD + +++ I+ RA + V A + + F P+ +N+I+D LV D A
Sbjct: 67 PDSLQPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAH 126
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
Y +M+A+GV D T+ + +K CLT R +LL + RG Y T++
Sbjct: 127 KVY-VRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRG 185
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L +G AR L +M P+ TF+ ++ A C++ +++ + LL K G +
Sbjct: 186 LYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSAN 245
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQ---------------GRLGKVKGGCRFLKE 226
T + LC GR+ +AV ++E G + KV+ ++L
Sbjct: 246 KFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGR 305
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +GC+P+ TYN +I YC++G+L A ++ D G + VTY +LI GLC+ G
Sbjct: 306 MMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGD 365
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
I+ L++ E + K + YNS++ GL
Sbjct: 366 IERALELFN--EAQAKDLKPDLVVYNSLVKGL---------------------------- 395
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
C G + A + ++M+EEG P++ Y+ +I+ C+ + +A+ +M + G
Sbjct: 396 -----CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKG 450
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
YLP TFNT++ G C++ + +AL+LVE R G P Y+ ++ LC+ G +
Sbjct: 451 YLPDVFTFNTLIDGYCKRLKLDSALQLVE---RMWTYGIAPDVITYNSVLNGLCKAGKAK 507
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
+ +M+ KG P+ +T+N L+
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILI 532
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 210/460 (45%), Gaps = 42/460 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T++RGL + + + + + P +N+I+D K +
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + G D TY L+ GLC + +L + +++ +KP+ V+YN+L+ LC+
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A +M++M E P+ T++I+I CK N+ +A V++ + G++PDV T
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ C ++ A++++E G + GK K +EM
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN TYNILI ++C+ L+ A V M DG+ + V+++TLI G C G +D
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK- 347
+ Q +++ +G +N +L G Y ++ EK+F + + K
Sbjct: 578 GAYLLFQKLDE--KGYSATADTFN-ILIGAYSSKLN------MQMAEKIFGEMISKGYKP 628
Query: 348 --------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ G C NV+ A +MI +G VP++ + +++ RV EA ++
Sbjct: 629 DLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
M G +P +T+LS + + LVEE M+
Sbjct: 689 HIMVRMGVVP--EVVDTILS--TDKKEIAAPKILVEELMK 724
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 189/432 (43%), Gaps = 64/432 (14%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV--IYNTLIHSLCKNGKVGRARSLMS 140
Y L++ L R+ D L +S + P+S+ +Y I + + G++ A
Sbjct: 37 AYRALIRELVSAGRLDDVDAALASARSH-LAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95
Query: 141 DME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M+ P ++ ++ A A + + + G PD T T L+ C G
Sbjct: 96 RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLK----------------EMERKGCLPNVDTYN 240
R A+ +L E+G K C ++ EM + P+V T+N
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215
Query: 241 ILISSYCETG-VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
++ + C+ G V++S + +K G+S N T + IRGLC GR+++ + +++ M
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLK-RGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-- 272
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
G Y + P V + + G C D V++
Sbjct: 273 -----------------GAY-----------------VAPDVVTYNTLMRGLCKDSKVQE 298
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + +M+ +G +P+ Y+ +I YC+ ++EA+EL+K+ G++P T+ ++++
Sbjct: 299 AAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLIN 358
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLC +G++ AL+L E + P Y+ L+K LC +G A ++ +MV +G
Sbjct: 359 GLCAEGDIERALELFNE---AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Query: 480 ILPDYLTWNSLL 491
PD T+N ++
Sbjct: 416 CHPDIWTYNIII 427
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 149/339 (43%), Gaps = 48/339 (14%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
R G+++ + M+ C P YN ++ + D A V+ M G++ +
Sbjct: 82 ARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDA 141
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
T+ ++ C GR L++L+ + S+ G + + Y +V+ GLY A
Sbjct: 142 RTHTVRLKSFCLTGRPHVALRLLRSL--SERGCDAKPAAYCTVVRGLYAHGHGYNARHLF 199
Query: 332 KQM--EKLFP--------------------------RAVDRSLK---------ILGFCVD 354
+M +FP + + R + I G C D
Sbjct: 200 DEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCED 259
Query: 355 GNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G +E+A ++M G P+VV Y+ L+ C++ +V+EA++ + M G +P
Sbjct: 260 GRLEEAVALVERM---GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDF 316
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+NT++ G C+ G + A +L+++ + +G +P Y LI LC +G + A L
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKD---AVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
+ K + PD + +NSL+ L +Q L L ++NEMV
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMV 412
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 236/501 (47%), Gaps = 27/501 (5%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +FI +I G R +K + F P+++I+N +LD L+ E+ + Y
Sbjct: 109 EDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLY- 167
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G+ + +TY IL+K LC +RV KL M ++G P++V Y T++ SLCK
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
GK+ AR L + P+ ++ LI CKE + A+ LL + G P+VV+ + ++
Sbjct: 228 GKIDDARELAGRFK-PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCII 286
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
LC G V A + + +G GK+ K M + GC
Sbjct: 287 NSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCE 346
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PNV YN LI C G L+ AL V + M+ G N TY LI G G + +
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASET 406
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
M G + + Y ++ L + + D+A +++M E P + + I G
Sbjct: 407 WNRM--ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGL 464
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +G VE A + ++M G +PN+ Y+ L+ A + + EA L +E+ P
Sbjct: 465 CGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNL 524
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T+NTVL G R G +G AL+L + + RG+ P S Y+ +I A C++G + A+ L
Sbjct: 525 VTYNTVLYGFSRAGMMGEALQLFG---KALVRGTAPDSITYNTMIHAYCKQGKVKIAAQL 581
Query: 472 LVQMVG-KGILPDYLTWNSLL 491
+ ++ K PD +T+ SL+
Sbjct: 582 VERVSSMKEWHPDIITYTSLI 602
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 214/429 (49%), Gaps = 28/429 (6%)
Query: 91 LCLTN---RVG---DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
+C+ N RVG K+ + + G KP IYN L+ +L K L ++M++
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172
Query: 145 ----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
PN T++IL+ A CK + + A L + + G PD VT T ++ LC G++ D
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232
Query: 201 AVEILEESGEQ-----------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
A E+ + G+++ + L EM G PNV +Y+ +I+S C +
Sbjct: 233 ARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVS 292
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G ++ A +F M + G N T+ LI+G G++ + L + +LM ++G + +
Sbjct: 293 GNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM--IQDGCEPNVV 350
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN++++GL +EAL+ QM++ P S+ I GF G++ A +++M
Sbjct: 351 AYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM 410
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
I G PNVV Y C++ C+ +A+ L+++MT G P TFNT + GLC G V
Sbjct: 411 ISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRV 470
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A+KL+E R G G LP Y+ L+ AL ++ A L ++ + + P+ +T+
Sbjct: 471 EWAMKLLE---RMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTY 527
Query: 488 NSLLICLSQ 496
N++L S+
Sbjct: 528 NTVLYGFSR 536
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 198/438 (45%), Gaps = 67/438 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-------- 59
PPD + T++ L +A I+D A +L RF PS+ ++N+++D + KE
Sbjct: 211 PPDAVTYTTMVSSLCKAGKIDD---ARELAGRFK--PSVPVYNALIDGMCKEGRIEVAIK 265
Query: 60 ----------------------------DIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+++LA A + +M G + +T+ L+KG
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALF-AQMFLRGCDANIHTFTPLIKGC 324
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
+ ++ + L +M G +PN V YNTLIH LC NG + A + M+ PN
Sbjct: 325 FMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNV 384
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
T+SILI + K +LV A + S G P+VVT T ++++LC A ++E+
Sbjct: 385 TTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEK 444
Query: 208 SGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+G G+V+ + L+ M+ GCLPN+ TYN L+ +
Sbjct: 445 MTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNK 504
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A +F +++ + N VTY+T++ G G + + L++ + G+ Y
Sbjct: 505 YEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG--KALVRGTAPDSITY 562
Query: 312 NSVLYGLYRENQ---QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
N++++ ++ + + +E + M++ P + + I G C N+E+A D+ I
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAI 622
Query: 369 EEGGVPNVVIYDCLIHAY 386
+G PN ++ L+ +
Sbjct: 623 NQGICPNFATWNALVRCF 640
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 12/256 (4%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY ++I +D + MK+DGI+ + +I G G + LK+ +
Sbjct: 76 TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ G K + YN +L L EN+ M+K L P ++ + C +
Sbjct: 136 --GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKND 193
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A + F +M +G P+ V Y ++ + C+ ++ +A EL + P +N
Sbjct: 194 RVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-----FKPSVPVYN 248
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ G+C++G + A+KL+ E M G P YS +I +LC G + A L QM
Sbjct: 249 ALIDGMCKEGRIEVAIKLLGEMM---DNGVDPNVVSYSCIINSLCVSGNVELAFALFAQM 305
Query: 476 VGKGILPDYLTWNSLL 491
+G + T+ L+
Sbjct: 306 FLRGCDANIHTFTPLI 321
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 29/266 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDI-DLA 64
P+ + + +I G ++ D+V A++ +R P++ + ++DVL K + D A
Sbjct: 382 PNVTTYSILIDGFAKS---GDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQA 438
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ +KM G + T+ +KGLC RV KLL M+ G PN YN L+
Sbjct: 439 NSLV-EKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLD 497
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+L + K A L ++E +PN VT++ ++ + + + AL L K+ G P
Sbjct: 498 ALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAP 557
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK--------VKGGCR---------F 223
D +T ++ C G+V A +++E + G C F
Sbjct: 558 DSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAF 617
Query: 224 LKEMERKGCLPNVDTYNILISSYCET 249
L + +G PN T+N L+ + ++
Sbjct: 618 LDKAINQGICPNFATWNALVRCFFDS 643
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/442 (32%), Positives = 218/442 (49%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P L + ++++ L K DIDLA +
Sbjct: 183 PDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSL 242
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KKM ++ D Y ++ GLC + D F L + M+++G++P+ YN+LI LC
Sbjct: 243 L-KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+S+M E PN VTFS LI A+ KE LV A L ++ PD+
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A + E M K C PNV TYN LI
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTYNTLI 402
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ ++ +++F +M G+ N VTY+TLI+GL G D KI + M +G
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM--VSDG 460
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I Y+ +L GL + + ++AL EYL Q K+ P ++ I G C G VED
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G PNV+IY +I +C++ EA L +EM G LP + +NT++
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 579
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 580 RLRDGDKAASAELIKE-MRSCG 600
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 220/462 (47%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + DL + ++M + D Y+Y IL+ C +++
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISL-GERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+L M G +P+ V ++L++ C + ++ A +L+ M E P+ VTF+ LI
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLF 196
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ G PD+VT V+ LC G + A+ +L
Sbjct: 197 LHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLL------------- 243
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
K+ME+ +V YN +I C+ +D A +FN M+ GI + TY++LI
Sbjct: 244 ------KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LC+ GR D ++L M + K + +++++ +E + EA EKL+
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPN--VVTFSALIDAFVKEGKLVEA-------EKLY 348
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ I GFC+ +++AK F+ MI + PNVV Y+ LI +C+
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV E EL +EM+ G + T+NT++ GL + G+ A K+ + + + G P
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSDGVPPDI 465
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC+ G + A ++ + + PD T+N ++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 204/428 (47%), Gaps = 32/428 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +P+ V Y +++ LCK G
Sbjct: 175 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRG 234
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A SL+ ME E + V ++ +I CK +++ +A L K + G PDV T
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYN 294
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ LC+ GR DA R L M + PNV T++ LI ++
Sbjct: 295 SLISCLCNYGRWSDA-------------------SRLLSNMIERKINPNVVTFSALIDAF 335
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ G L A ++++M I + TY +LI G C R+D+ + +LM SK+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPN 394
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
++ YN+++ G + + +E +E ++M + L V + I G G+ + A++ F
Sbjct: 395 VVT-YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M+ +G P+++ Y L+ C+ ++ +A + + + P T+N ++ G+C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 425 GNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G V L ++G+ P Y+ +I C KG + A L +M G LPD
Sbjct: 514 GKVEDGWDLFCSLSLKGVK----PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 569
Query: 484 YLTWNSLL 491
+N+L+
Sbjct: 570 SGCYNTLI 577
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 185/416 (44%), Gaps = 30/416 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL---MSDME 143
L + L ++ D L M P+ V +N L+ ++ K K SL M ++
Sbjct: 51 LSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLR 110
Query: 144 EPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
D+ +++ILI +C+ L AL +L K G+ PD+VT++ +L C R+ DAV
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 170
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++++ E G P+ T+N LI A+ + + M
Sbjct: 171 ALVDQMVEMGYK-------------------PDTVTFNTLIHGLFLHNKASEAVALVDQM 211
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + VTY ++ GLC G ID L +L+ ME K + + YN+++ GL +
Sbjct: 212 VQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK--IEADVVIYNTIIDGLCKYK 269
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D+A +ME + P + I C G DA R MIE PNVV +
Sbjct: 270 HIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFS 329
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI A+ +E ++ EA +L EM P T++++++G C + A + E
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE---LM 386
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I + P Y+ LIK C+ + L +M +G++ + +T+N+L+ L Q
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 7/251 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+ +F +M + V ++ L+ + + D + + + M++ + + Y
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYD--LYSY 118
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ R +Q AL L +M KL P V S + G+C + DA DQM+E
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 178
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+ V ++ LIH + EA L+ +M G P T+ V++GLC++G++
Sbjct: 179 MGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L+++ +G + Y+ +I LC+ A L +M KGI PD T+NS
Sbjct: 239 ALSLLKKMEKGKIEADVV---IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNS 295
Query: 490 LLICLSQQTTW 500
L+ CL W
Sbjct: 296 LISCLCNYGRW 306
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 22/297 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ F +I + + + K D + + ++ P + ++S+++ D +D A+
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ + TY L+KG C RV +G +L M RG+ N+V YNTLI L
Sbjct: 383 F-ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD P+ +T+SIL+ CK L ALV+ E PD+
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEM 227
T ++E +C G+V D ++ +G + G CR +EM
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ G LP+ YN LI + G ++ ++ +M+ G + T +I L G
Sbjct: 562 KEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/474 (30%), Positives = 228/474 (48%), Gaps = 39/474 (8%)
Query: 49 FNSILDVLVKEDIDLARAF--YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
+N +L L + D ARA +R +M GV TY ++ GLC +N +G G +L
Sbjct: 4 YNIVLQSLCRAG-DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE 62
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEEN 162
+ RG P+ V YNTLI SLCK G + AR L DM PN VT+S+LI CK
Sbjct: 63 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 163 LVNALVLLEKSF--SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL------ 214
+ A L+++ S +P+++T L+ LC +A E++ S G L
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR-SLRDGSLRVSPDT 181
Query: 215 -------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
G++ C +M G +PNV TYN L++ C+ ++ A +
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYG 317
M G++ + +TY L+ C R+D+ L++L M S+ + + P +N ++ G
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA-SRGCTPNVLVPDKVTFNILIAG 300
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+ ++A ++M + L P + I G C G VE A+ D M G PN
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VV Y+ L+H C+ R+ EA + ++EM G +P + T+ +++ LCR AL+LV
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
E ++ G P + Y+ L+ L + G + A +L +MVGKG PD T+ +
Sbjct: 421 E-LKSFGWD--PDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAA 471
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 230/499 (46%), Gaps = 44/499 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLA 64
P + T+I GL ++ ND+ +L P + +N+++D L K D++ A
Sbjct: 35 PTIVTYNTIINGLCKS---NDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEA 91
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNTL 122
R + M + G + TY++L+ GLC R+ + +L+ M KS V PN + YN+
Sbjct: 92 RRLH-GDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSF 150
Query: 123 IHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+ LCK A LM + + P+ VTFS LI CK + A + + +
Sbjct: 151 LDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG 210
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G+VP+V+T ++ LC ++ A ++E ++G + +V
Sbjct: 211 GYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEA 270
Query: 221 CRFLKEMERKGCLPNV-----DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
L M +GC PNV T+NILI+ C+ G + A +F +M + + +T+
Sbjct: 271 LELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFG 330
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM- 334
LI GLC G+++ IL LM G + YN++++GL + + +EA ++L++M
Sbjct: 331 ALIDGLCKAGQVEAARDILDLM--GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 388
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
P ++ + C +DA + ++ G P+ V Y+ L+ + +
Sbjct: 389 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTE 448
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+A +++EM G G+ P + TF SGL R GN+ ++L+ + +G LP + S
Sbjct: 449 QAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR---VVLAKGMLPDATTCS 505
Query: 454 PLIKALCEKGGFQSASMLL 472
++ +C G ++
Sbjct: 506 SILDWVCRSGKLDDVKAMI 524
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/450 (30%), Positives = 216/450 (48%), Gaps = 49/450 (10%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHV----MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
Y I+++ LC R GD + L + M GV P V YNT+I+ LCK+ +G L
Sbjct: 4 YNIVLQSLC---RAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
++ E P+ VT++ LI + CK +L A L S G VP+VVT + ++ LC V
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC--LPNVDTYNILISSYCETGVLD 253
GR+ + + ++EM RK C LPN+ TYN + C+ +
Sbjct: 121 ----------------GRIDEAR---ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 161
Query: 254 SALDVFNDMKIDG---ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
A ++ ++ DG +S + VT+ TLI GLC G+ID+ + M G +
Sbjct: 162 EACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDM--IAGGYVPNVIT 218
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN+++ GL + ++ + A ++ M + + P + S+ + FC V++A M
Sbjct: 219 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 278
Query: 369 EEGGVPNV-----VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
G PNV V ++ LI C+ +AS L +EM P TF ++ GLC+
Sbjct: 279 SRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 338
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G V A ++ D+ G G P Y+ L+ LC+ G + A L +MV G +PD
Sbjct: 339 AGQVEAARDIL--DLMG-NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 395
Query: 484 YLTWNSLLICLSQQT-TWLLLLLLNEMVSF 512
+T+ SL+ L + + T L L++E+ SF
Sbjct: 396 SITYGSLVYALCRASRTDDALQLVSELKSF 425
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 209/444 (47%), Gaps = 38/444 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKEDIDLARA 66
P+ + +I GL + I++ + ++R ++ P++ +NS LD L K+ + A A
Sbjct: 105 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM-TAEA 163
Query: 67 FYRKKMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ + G V D T++ L+ GLC ++ + + M + G PN + YN L+
Sbjct: 164 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALV 223
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG-- 177
+ LCK K+ RA +++ M + P+ +T+S+L+ A+CK + AL LL S G
Sbjct: 224 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 283
Query: 178 ---FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
VPD VT ++ C G A + EE M K P
Sbjct: 284 PNVLVPDKVTFNILIAGACKAGNFEQASALFEE-------------------MVAKNLQP 324
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V T+ LI C+ G +++A D+ + M G+ N VTY+ L+ GLC GRI++ + L
Sbjct: 325 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 384
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFC 352
+ M S G Y S++Y L R ++ D+AL+ + +++ P V ++ + G
Sbjct: 385 EEMVSS--GCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 442
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G E A ++M+ +G P+ + + + EL++ + G LP A+
Sbjct: 443 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDAT 502
Query: 413 TFNTVLSGLCRQGNVGTALKLVEE 436
T +++L +CR G + +++E
Sbjct: 503 TCSSILDWVCRSGKLDDVKAMIKE 526
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 14/264 (5%)
Query: 236 VDTYNILISSYCETGVLDSALDVF-NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
V YNI++ S C G AL++F +M DG++ VTY+T+I GLC + G+++
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
+ E + G + YN+++ L + +EA M P V S+ I G C
Sbjct: 61 E--ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLC 118
Query: 353 VDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL-- 408
G +++A+ +M + +PN++ Y+ + C++ EA ELM+ + G L
Sbjct: 119 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR-DGSLRV 177
Query: 409 -PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P TF+T++ GLC+ G + A + ++ + G G +P Y+ L+ LC+ +
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG---GYVPNVITYNALVNGLCKADKMER 234
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A ++ MV KG+ PD +T++ L+
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLV 258
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 147/347 (42%), Gaps = 62/347 (17%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-ID 62
S++ PD F T+I GL + I++ D + P++ +N++++ L K D ++
Sbjct: 174 SLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKME 233
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN-----SV 117
A A + M+ GV D TY++L+ C +RV + +LLH M SRG PN V
Sbjct: 234 RAHAMI-ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKV 292
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKS 173
+N LI CK G +A +L +M +P+ +TF LI CK + A +L+
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLM 352
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
+ G P+VVT ++ LC GR+ +A + LEE G R +
Sbjct: 353 GNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRT 412
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ + E++ G P+ TYNIL+ ++G + A+ V +M G + T+
Sbjct: 413 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 472
Query: 278 IRGL-----------------------------------CSGGRIDD 289
GL C G++DD
Sbjct: 473 FSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDD 519
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 67/135 (49%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +++ L RA +D ++ + F P +N ++D L K
Sbjct: 394 PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITV 453
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ G Q D +T+A GL + + +LL V+ ++G+ P++ ++++ +C+
Sbjct: 454 LEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCR 513
Query: 129 NGKVGRARSLMSDME 143
+GK+ ++++ + E
Sbjct: 514 SGKLDDVKAMIKEFE 528
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 252/525 (48%), Gaps = 65/525 (12%)
Query: 9 PDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
P SI F + + + + + VV + + F +T ++ N +++ L + +D A
Sbjct: 89 PRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAV 148
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ + KM G+Q D T+ L+ G+C ++ +L + M G +P+ + YNTLI+
Sbjct: 149 SVW-GKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLING 207
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G A + ME+ PN VT++ +I + CK+ + +A+ L + G PD
Sbjct: 208 LCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPD 267
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+T ++ LC +G++ +A R K ME+ GC P+V TYNI
Sbjct: 268 AITYNSIVHGLCCLGQLNEAT-------------------RLFKRMEQNGCKPDVVTYNI 308
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I S + +++ A D ++M GI + VTY T++ GLC G++++ +++ + ME +
Sbjct: 309 IIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME--Q 366
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G K + YN+++ L ++ ++A+E+L +M + P AV S + GFC G +++
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + F +M+ +PN + + L+ CQE V EA + + MT G P T+N +++
Sbjct: 427 ATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMN 486
Query: 420 GLCRQGNVGTALKLVEEDMRGIG---------------------------------RGSL 446
G C + + A K V E M G G +
Sbjct: 487 GYCLRCKMNEARK-VFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLT 545
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + Y+ ++K LC G A L +M G+LP +T++ LL
Sbjct: 546 PNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILL 590
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 239/494 (48%), Gaps = 40/494 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I G+ I V+ + + R P + +N++++ L
Sbjct: 161 PDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHV 220
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM +G + + TY ++ LC V D L M RG+ P+++ YN+++H LC
Sbjct: 221 FKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCC 280
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L ME+ P+ VT++I+I + K+ + +A L + G PDVVT
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +L LC +G++ +A+ R K+ME+KGC P+V YN +I
Sbjct: 341 YTTILHGLCYLGQLNEAI-------------------RLFKKMEQKGCKPDVVAYNTIID 381
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
S C+ +++ A++ ++M GI N VTY T++ G C+ G++D+ ++ + M
Sbjct: 382 SLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV------ 435
Query: 305 KGRISPYNSVLY-----GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
GR N++ + GL +E EA + M + + P + + G+C+ +
Sbjct: 436 -GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+A++ F+ M+ +G P++ Y+ LI+ YC R+ +A L+ +M+ P T+NT+
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ GLC G + A +L + + G LP YS L+ LC+ G A L M
Sbjct: 555 MKGLCYVGRLLDAQELFK---KMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKE 611
Query: 478 KGILPDYLTWNSLL 491
K + PD + + L+
Sbjct: 612 KKLEPDIILYTILI 625
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 231/490 (47%), Gaps = 32/490 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I GL + N V + + P++ +N+I+D L K+ + +
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDF 255
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+ D TY ++ GLC ++ + +L M+ G KP+ V YN +I SL K
Sbjct: 256 LSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYK 315
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ V A +S+M + P+ VT++ ++ C L A+ L +K G PDVV
Sbjct: 316 DRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA 375
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC V DA+E FL EM +G PN TY+ ++
Sbjct: 376 YNTIIDSLCKDRLVNDAME-------------------FLSEMVDRGIPPNAVTYSTILH 416
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C G LD A +F +M + N +T+ L+ GLC G + + + + M +++G
Sbjct: 417 GFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETM--TEKGV 474
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ I YN+++ G + +EA + + M + P ++ I G+C ++ AK
Sbjct: 475 EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKA 534
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
QM + PN V Y+ ++ C R+ +A EL K+M G LP T++ +L+GLC
Sbjct: 535 LLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLC 594
Query: 423 RQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ G++ ALKL + + L P Y+ LI+ + G + A L ++ GI
Sbjct: 595 KHGHLDEALKL----FKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQ 650
Query: 482 PDYLTWNSLL 491
P T+N ++
Sbjct: 651 PPGRTYNVMI 660
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 206/416 (49%), Gaps = 24/416 (5%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + +++ GL +N+ + + + P + +N I+D L K+ + A
Sbjct: 265 PPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAAD 324
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D TY ++ GLC ++ + +L M+ +G KP+ V YNT+I SLC
Sbjct: 325 FLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC 384
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A +S+M + PN VT+S ++ +C L A L ++ +P+ +
Sbjct: 385 KDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTL 444
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEM 227
T + +++ LC G V +A + E E+G + G C + + M
Sbjct: 445 TFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIM 504
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC P++ +YNILI+ YC + +D A + M + ++ N VTY+T+++GLC GR+
Sbjct: 505 VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRL 564
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D ++ + M S G + Y+ +L GL + DEAL+ K M +KL P + +
Sbjct: 565 LDAQELFKKMCSS--GMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYT 622
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I G + G +E AK F ++ +G P Y+ +I +E EA EL ++
Sbjct: 623 ILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 205/453 (45%), Gaps = 58/453 (12%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
T V D + M +P+ V + + S+ K + L + M+ +
Sbjct: 71 TISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYS 130
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE-- 207
+ILI C+ ++ A+ + K F G PDV+T T ++ +C+ G++ AVE+ E
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190
Query: 208 -SGEQGRL-------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
SG + + G K+ME+ GC PNV TYN +I S C+ +++
Sbjct: 191 RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVN 250
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------------- 300
A+D ++M GI + +TY++++ GLC G++++ ++ + ME +
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310
Query: 301 --------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
+G + Y ++L+GL Q +EA+ K+ME+
Sbjct: 311 DSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCK 370
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + I C D V DA +M++ G PN V Y ++H +C ++ EA++L
Sbjct: 371 PDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQL 430
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
KEM G +P TF+ ++ GLC++G V A + V E M +G P Y+ L+
Sbjct: 431 FKEMVGRNVMPNTLTFSILVDGLCQEGMVSEA-RWVFETM--TEKGVEPNIYTYNALMNG 487
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C + A + MVGKG PD ++N L+
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILI 520
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 28/281 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PP+ + T++ G +++ + ++V R N+ P+ F+ ++D L +E +
Sbjct: 405 PPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR-NVMPNTLTFSILVDGLCQEGMVSEAR 463
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + M GV+ + YTY LM G CL ++ + K+ +M +G P+ YN LI+
Sbjct: 464 WVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGY 523
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C + ++ +A++L++ M PN VT++ ++ C L++A L +K S G +P +
Sbjct: 524 CNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTL 583
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQ-------------------GRLGKVKGGCRF 223
+T + +L LC G + +A+++ + E+ G+L KG
Sbjct: 584 MTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG---L 640
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
++ G P TYN++I + G+ D A ++F K+
Sbjct: 641 FSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKM 681
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 231/487 (47%), Gaps = 43/487 (8%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ + + V D YTY L++ LC RV D LL M RG +PN V Y L+ ++CK
Sbjct: 130 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N +A +++ +M PN VT++++I C+E + +A LL + FS+G PD V+
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +L+ LC+ R D E+ EM K C+PN T+++LI
Sbjct: 250 YTTLLKGLCASKRWDDVEEL-------------------FAEMMEKNCMPNEVTFDMLIR 290
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C G+++ A+ V M + N + +I +C GR+DD K L M G
Sbjct: 291 FFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM--GSYGC 348
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y +VL GL R + ++A E LK+M P V + I C G +E A
Sbjct: 349 NPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIM 408
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+QM E G VV Y+ L++ +C + + A EL + M P T+ T+L+GLC
Sbjct: 409 LIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLC 465
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ A +LV E + R P ++ L+ C+KG A L+ QM+ G P
Sbjct: 466 NAERLDAAAELVAEMLH---RDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTP 522
Query: 483 DYLTWNSLL-----ICLSQQTTWLLLLLLN-----EMVSFVMVVHELSAKEKRCKLRSLN 532
+ +T+N+L C S+ LL L++ ++++F ++ LS +++ + +
Sbjct: 523 NLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMF 582
Query: 533 HLAHGAG 539
HLA G
Sbjct: 583 HLAQDIG 589
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 241/519 (46%), Gaps = 36/519 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-ID 62
S+ PD + +IR L + D + D + R P++ + +L+ + K +
Sbjct: 135 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFE 194
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A A +M A G + TY +++ G+C RV D LL+ + S G +P++V Y TL
Sbjct: 195 QAMAVL-DEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTL 253
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ LC + + L ++M E PN+VTF +LI +C+ + A+ +L++
Sbjct: 254 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR--------- 222
+ V+ +C GRV DA + L G G +KG CR
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
LKEM R C PN T+N I C+ G+++ A+ + M+ G + VTY+ L+ G C
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC 433
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
G ID L++ + M K Y ++L GL + D A E + +M P
Sbjct: 434 VQGHIDSALELFRSMP-----CKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPN 488
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ + FC G +++A +QM+E G PN++ Y+ L ++ +A EL+
Sbjct: 489 VVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL--VEEDMRGIGRGSLPGSGHYSPLIKA 458
+ G P TF++++ L ++ V A+++ + +D+ G P + Y+ ++
Sbjct: 549 GLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDI-----GMRPKALVYNKILLG 603
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LC++ +A L MV G +P+ T+ L+ L+++
Sbjct: 604 LCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLARE 642
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 191/397 (48%), Gaps = 34/397 (8%)
Query: 102 KLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EPNDV-TFSILICA 156
+L+ + SR G P+ + LI +LC+ G+ A ++ E P DV ++ L+
Sbjct: 60 RLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAG 119
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
YC+ +L A L+ S PD T T ++ +LC GRV DA+ +L++
Sbjct: 120 YCRYGHLDAARRLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDD--------- 167
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M R+GC PNV TY +L+ + C+ + A+ V ++M+ G + N VTY+
Sbjct: 168 ----------MLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNV 217
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
+I G+C GR+DD +L + G + Y ++L GL + D+ E +M
Sbjct: 218 IINGMCREGRVDDARDLLNRL--FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 275
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ P V + I FC G VE A + QM E N + + +I++ C++ RV +
Sbjct: 276 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDD 335
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A + + M +G P ++ TVL GLCR A +L++E +R P ++
Sbjct: 336 AFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRN---NCPPNEVTFNT 392
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I LC+KG + A ML+ QM G +T+N+L+
Sbjct: 393 FICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALV 429
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 200/418 (47%), Gaps = 23/418 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+++GL ++ +DV + + N P+ F+ ++ + + + RA
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGM-VERAIQ 303
Query: 69 RKKMMASGVQGDDYTYA-ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M + T I++ +C RV D FK L+ M S G P+++ Y T++ LC
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ + A+ L+ +M PN+VTF+ IC C++ + A++L+E+ G VV
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV 423
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL-------------GKVKGGCRFLKEMERK 230
T ++ C G + A+E+ + ++ + EM +
Sbjct: 424 TYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHR 483
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C PNV T+N+L++ +C+ G LD A+++ M G + N +TY+TL G+ +D
Sbjct: 484 DCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDA 543
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE--YLKQMEKLFPRAVDRSLKI 348
L++L + +G + ++S++ L +E++ +EA++ +L Q + P+A+ + +
Sbjct: 544 LELLHGL--VSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKIL 601
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
LG C +++A M+ G +PN Y LI +E ++EA +L+ + G
Sbjct: 602 LGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG 659
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 134/314 (42%), Gaps = 58/314 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + TV++GL RA ND + + R N P+ FN+ + +L ++ +
Sbjct: 350 PDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIML 409
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G TY L+ G C+ + +L +S KPN++ Y TL+ LC
Sbjct: 410 IEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELF---RSMPCKPNTITYTTLLTGLCN 466
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKE-------------------ENLV- 164
++ A L+++M PN VTF++L+ +C++ NL+
Sbjct: 467 AERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLIT 526
Query: 165 ---------------NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+AL LL S G PDV+T + ++ +L RV +A+++ +
Sbjct: 527 YNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQ 586
Query: 210 EQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ G K + G C+ FL M GC+PN TY ILI G+L
Sbjct: 587 DIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLK 646
Query: 254 SALDVFNDMKIDGI 267
A D+ + + G+
Sbjct: 647 EAQDLLSMLCSRGV 660
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 14/223 (6%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK---- 58
S+ P+ + T++ GL A ++ + + + P++ FN +++ +
Sbjct: 446 RSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFL 505
Query: 59 -EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
E I+L ++MM G + TY L G+ D +LLH + S+GV P+ +
Sbjct: 506 DEAIELV-----EQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVI 560
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
++++I L K +V A + ++ P + ++ ++ CK + NA+ L
Sbjct: 561 TFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYM 620
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
S G +P+ T ++E L G + +A ++L +G + K
Sbjct: 621 VSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSK 663
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F ++I L + + + ++ L M P ++N IL L K +ID A F
Sbjct: 557 PDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDF 616
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
M+++G ++ TY IL++GL + + LL ++ SRGV ++I
Sbjct: 617 L-AYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNLI 666
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 162/580 (27%), Positives = 274/580 (47%), Gaps = 46/580 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +IR L R +D + + +N+ LV R
Sbjct: 68 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT----LVAGYCRYGRLDA 123
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++AS V D YTY L++GLC RVGD LL M R +P+ V Y L+ ++C
Sbjct: 124 ARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVC 183
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ G+A ++ +M PN VT++++I C+E+ + +A +L + S+GF PD V
Sbjct: 184 KSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTV 243
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ T VL+ LC+ R D + E E R G V+ L M
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GC N NI+I+S C+ G +D A + N+M G S + ++Y T+++GLC GR
Sbjct: 304 SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRW 363
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRS 345
+D ++L M ++ +N+ + L ++ D+A+ ++QM + V +
Sbjct: 364 EDAKELLNEM--VRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYN 421
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ GFCV G V+ A F+ + E PN + Y L+ C ER+ A+EL+ EM +
Sbjct: 422 ALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEMMQN 478
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
TFN ++S C++G V A++LV++ M G P ++ L+ + E
Sbjct: 479 DCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMME---HGCTPNLITFNTLLDGITEDCNS 535
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS-------FVMVVHE 518
+ A LL +V KGI D +T++S++ LS++ + + V VM
Sbjct: 536 EEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKI 595
Query: 519 LSAKEKRCKL-RSLNHLAHGAGSVWLGLRIHDTTHTFIID 557
LSA KRC+ R+++ AH + + +++T+ +I+
Sbjct: 596 LSALCKRCETDRAIDFFAHMVSNSCMP---NESTYVILIE 632
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 238/518 (45%), Gaps = 34/518 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PPD + +IRGL + D + D + R PS+ + +L+ + K
Sbjct: 130 SMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFG 189
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M A G + TY +++ G+C +RV D ++L+ + S G +P++V Y T++
Sbjct: 190 QAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVL 249
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC + L +M E PN+VTF +L+ +C+ + A+ +L++ G
Sbjct: 250 KGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCT 309
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
+ V+ +C GRV DA E L G G R G+ +
Sbjct: 310 ANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKEL 369
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L EM RK C PN T+N I C+ G++D A+ + M G S VTY+ L+ G C
Sbjct: 370 LNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCV 429
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFP-RA 341
GR+D L++ +S I+ Y ++L GL + D A E L + M+ P
Sbjct: 430 QGRVDSALELF----NSLPCEPNTIT-YTTLLTGLCHAERLDAAAELLAEMMQNDCPLNV 484
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ + FC G VE+A QM+E G PN++ ++ L+ ++ EA EL+
Sbjct: 485 VTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHG 544
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKAL 459
+ G T+++++ L R+ + A+++ +DM G P + Y+ ++ AL
Sbjct: 545 LVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDM-----GMRPKAVMYNKILSAL 599
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C++ A MV +P+ T+ L+ L+++
Sbjct: 600 CKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLARE 637
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 196/410 (47%), Gaps = 33/410 (8%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---E 144
++ L + + + +L+ SRG P+ + LI +LC+ G+ A ++ E
Sbjct: 42 LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101
Query: 145 PNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P DV ++ L+ YC+ L A L+ S PD T T ++ LC GRV DA+
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIA---SMPVPPDAYTYTPLIRGLCDRGRVGDALS 158
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L++ M R+ C P+V TY +L+ + C++ A+ V ++M+
Sbjct: 159 LLDD-------------------MLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMR 199
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G + N VTY+ +I G+C R+DD +IL + S G + Y +VL GL +
Sbjct: 200 AKGCTPNIVTYNVIINGMCREDRVDDARQILNRL--SSYGFQPDTVSYTTVLKGLCAAKR 257
Query: 324 -QDEALEYLKQME-KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+D + + + +E P V + + FC G VE A D+M E G N + +
Sbjct: 258 WEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNI 317
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+I++ C++ RV +A E + M +G P ++ TVL GLCR G A +L+ E +R
Sbjct: 318 VINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVR-- 375
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ P ++ I LC+KG A +L+ QM G +T+N+L+
Sbjct: 376 -KNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALV 424
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 215/487 (44%), Gaps = 67/487 (13%)
Query: 50 NSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+S L L+ D DLA A ++ + G D Y L++ LC R D ++L +
Sbjct: 39 SSRLRRLIARD-DLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAE 97
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV-TFSILICAYCKEENLVNAL 167
G + YNTL+ C+ G++ AR L++ M P D T++ LI C + +AL
Sbjct: 98 GSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDAL 157
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
LL+ P VVT T +LE +C A+++L+ EM
Sbjct: 158 SLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLD-------------------EM 198
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-----KIDGISW------------- 269
KGC PN+ TYN++I+ C +D A + N + + D +S+
Sbjct: 199 RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRW 258
Query: 270 -----------------NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
N VT+D L+R C GG ++ +++L M S+ G + N
Sbjct: 259 EDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM--SEHGCTANTTLCN 316
Query: 313 SVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
V+ + ++ + D+A E+L M P + + + G C G EDAK ++M+ +
Sbjct: 317 IVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK 376
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
PN V ++ I CQ+ + +A L+++M +G T+N +++G C QG V +A
Sbjct: 377 NCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA 436
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L+L P + Y+ L+ LC +A+ LL +M+ + +T+N L
Sbjct: 437 LELFN------SLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVL 490
Query: 491 LICLSQQ 497
+ Q+
Sbjct: 491 VSFFCQK 497
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 129/314 (41%), Gaps = 58/314 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + TV++GL RA D + + + R N P+ FN+ + +L ++ +
Sbjct: 345 PDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILL 404
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G TY L+ G C+ RV +L + S +PN++ Y TL+ LC
Sbjct: 405 IEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFN---SLPCEPNTITYTTLLTGLCH 461
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP---- 180
++ A L+++M + N VTF++L+ +C++ + A+ L+++ G P
Sbjct: 462 AERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLIT 521
Query: 181 -------------------------------DVVTITKVLELLCSVGRVMDAVEILEESG 209
D +T + ++++L R+ +AV++
Sbjct: 522 FNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQ 581
Query: 210 EQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ G K + C+ F M C+PN TY ILI G+L
Sbjct: 582 DMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLK 641
Query: 254 SALDVFNDMKIDGI 267
A V +++ G+
Sbjct: 642 EARYVLSELCSRGV 655
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
D + +++ L R I + V+ V M P ++N IL L K + D A F+
Sbjct: 553 DTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFF 612
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
M+++ ++ TY IL++GL + + +L + SRGV S+I
Sbjct: 613 -AHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLI 661
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 217/446 (48%), Gaps = 32/446 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDL 63
++ P+ F T+I GL ++ V D + P L + ++++ L K DIDL
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + KKM ++ D Y ++ LC V D L M ++G++PN V YN+LI
Sbjct: 223 ALSLL-KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC G+ A L+SDM E PN VTFS LI A+ KE LV A L ++
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD+ T + ++ C R+ +A + E M K C PNV TY
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTY 382
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI +C+ ++ +++F +M G+ N VTY+TLI+GL G D KI + M
Sbjct: 383 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM-- 440
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGN 356
+G I Y+ +L GL + + ++AL EYL Q K+ P ++ I G C G
Sbjct: 441 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGK 499
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VED F + +G PNV+IY +I +C++ EA L +EM G LP + T+NT
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 559
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIG 442
++ R G+ + +L++E MR G
Sbjct: 560 LIRARLRDGDKAASAELIKE-MRSCG 584
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 215/438 (49%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M Q + T+ L+ GL L N+ + L+ M +RG +P+ Y T+++ LCK G
Sbjct: 159 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 218
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A SL+ ME E + V ++ +I A C +N+ +AL L + + G P+VVT
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M N VTY+TLI+G C R+++G
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G YN+++ GL++ D A + K+M + + P + S+ +
Sbjct: 399 MELFREM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 456
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +E A F+ + + P++ Y+ +I C+ +V + +L ++ G
Sbjct: 457 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 516
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P + T++SG CR+G A L E G+LP SG Y+ LI+A G ++
Sbjct: 517 PNVIIYTTMISGFCRKGLKEEADALFREMKED---GTLPNSGTYNTLIRARLRDGDKAAS 573
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G + D T
Sbjct: 574 AELIKEMRSCGFVGDAST 591
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 221/462 (47%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + DL + ++M + D Y+Y IL+ C +++
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISL-GERMQNLRISYDLYSYNILINCFCRRSQLPLALA 120
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
+L M G +P+ V ++L++ C ++ A +L+ M +PN VTF+ LI
Sbjct: 121 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 180
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ + G PD+ T V+ LC G + A+ +L
Sbjct: 181 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL------------- 227
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
K+ME+ +V Y +I + C ++ AL++F +M GI N VTY++LI
Sbjct: 228 ------KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
R LC+ GR D ++L M + K + +++++ +E + EA EKL+
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPN--VVTFSALIDAFVKEGKLVEA-------EKLY 332
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ I GFC+ +++AK F+ MI + PNVV Y+ LI +C+
Sbjct: 333 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 392
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV E EL +EM+ G + T+NT++ GL + G+ A K+ + + + G P
Sbjct: 393 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSDGVPPDI 449
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC+ G + A ++ + + PD T+N ++
Sbjct: 450 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 491
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 187/416 (44%), Gaps = 30/416 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL---MSDME 143
L + + L ++ D L M P+ V +N L+ ++ K K SL M ++
Sbjct: 35 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 94
Query: 144 EPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
D+ +++ILI +C+ L AL +L K G+ PD+VT++ +L C R+ +AV
Sbjct: 95 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 154
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++++ F+ E + PN T+N LI A+ + + M
Sbjct: 155 ALVDQ--------------MFVMEYQ-----PNTVTFNTLIHGLFLHNKASEAVALIDRM 195
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + TY T++ GLC G ID L +L+ ME K + + Y +++ L
Sbjct: 196 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK--IEADVVIYTTIIDALCNYK 253
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
++AL +M+ + P V + I C G DA R MIE PNVV +
Sbjct: 254 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 313
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI A+ +E ++ EA +L EM P T++++++G C + A + E
Sbjct: 314 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE---LM 370
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I + P Y+ LIK C+ + L +M +G++ + +T+N+L+ L Q
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 426
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 7/251 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+D+F +M + V ++ L+ + + D + + + M++ + + Y
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD--LYSY 102
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ R +Q AL L +M KL P V S + G+C + +A DQM
Sbjct: 103 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 162
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
PN V ++ LIH + EA L+ M G P T+ TV++GLC++G++
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L+++ +G + Y+ +I ALC A L +M KGI P+ +T+NS
Sbjct: 223 ALSLLKKMEKGKIEADVV---IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 279
Query: 490 LLICLSQQTTW 500
L+ CL W
Sbjct: 280 LIRCLCNYGRW 290
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 22/297 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ F +I + + + K D + + ++ P + ++S+++ D +D A+
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 366
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ + TY L+KG C RV +G +L M RG+ N+V YNTLI L
Sbjct: 367 F-ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 425
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD P+ +T+SIL+ CK L ALV+ E PD+
Sbjct: 426 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 485
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEM 227
T ++E +C G+V D ++ +G + G CR +EM
Sbjct: 486 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 545
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ G LPN TYN LI + G ++ ++ +M+ G + T +I L G
Sbjct: 546 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 602
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 140/521 (26%), Positives = 248/521 (47%), Gaps = 51/521 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T++ GL +++ + + + P++ F ++++ L +E +
Sbjct: 144 PSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMNGLCREGRVVEAVAL 199
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK-----SRGVKPNSVIYNTLI 123
+M+ G+Q + TY ++ G+C ++GD L++++ SR +KPN VIY+ +I
Sbjct: 200 LDRMVEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRKMEEVSR-IKPNVVIYSAII 255
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
L K+G+ A++L S+M+E PN T++ +I +C A LL + F
Sbjct: 256 DGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMS 315
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
PDVVT + ++ L G+ +A E+ E +G + ++ R
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M KGC P+V T++ILI YC +D + + ++M G+ N +TY TLI G C
Sbjct: 376 FYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQ 435
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK------- 336
G ++ L +LQ M S G + N++L GL + +ALE K M+K
Sbjct: 436 LGNLNAALDLLQEMISS--GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDA 493
Query: 337 ------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+ P ++ I G +G +A+ +++M G VP+ + Y+ +I C++
Sbjct: 494 SHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQS 553
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ EA+++ M G+ P TF T+++G C+ G VG L++ E R RG + +
Sbjct: 554 RLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGR---RGIVANAI 610
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y LI C+ G A + +M+ G+ PD +T ++L
Sbjct: 611 TYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNML 651
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 132/507 (26%), Positives = 233/507 (45%), Gaps = 31/507 (6%)
Query: 20 GLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQ 78
G + ++D + + R P + F +L V+V+ E D+ + +RK M +
Sbjct: 50 GFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR-IP 108
Query: 79 GDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL 138
+ Y++ IL+K C +++ + G P+ V ++TL+H LC +V A
Sbjct: 109 CNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHF 168
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ +PN + F+ L+ C+E +V A+ LL++ G P+ +T +++ +C +G
Sbjct: 169 FHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDT 228
Query: 199 MDAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ A+ +L + E R+ G+ EM+ KG PN+ TYN
Sbjct: 229 VSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNC 288
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I+ +C +G A + +M +S + VT+ LI L G+ + ++ M
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEM--LP 346
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
G YNS++ G ++N+ D A + YL + P + S+ I G+C V+D
Sbjct: 347 RGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDD 406
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
+ +M G V N + Y LIH +CQ + A +L++EM G P T NT+L
Sbjct: 407 GMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLD 466
Query: 420 GLCRQGNVGTALKL--------VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
GLC G + AL++ ++ D P Y+ LI L +G F A L
Sbjct: 467 GLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQT 498
+M +G++PD +T+NS++ L +Q+
Sbjct: 527 YEEMPHRGLVPDTITYNSVIDGLCKQS 553
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 219/478 (45%), Gaps = 76/478 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN----MTPSLKIFNSILDVLVKEDIDLA 64
P++ + T++ G+ + + D V A +L+ + + P++ I+++I+D L K+
Sbjct: 210 PNQITYGTIVDGMCK---MGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTD 266
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ + +TY ++ G C + R + +LL M R + P+ V ++ LI+
Sbjct: 267 AQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+L K GK A L ++M PN +T++ +I + K+ L A + + G P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DV+T + +++ C RV D G + L EM R+G + N TY
Sbjct: 387 DVITFSILIDGYCGAKRVDD-------------------GMKLLHEMSRRGLVANTITYT 427
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI +C+ G L++ALD+ +M G+ N VT +TL+ GLC+ G++ D L++ ++M+ S
Sbjct: 428 TLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKS 487
Query: 301 KEG-------------------------SKGRIS-------------------PYNSVLY 316
K ++G+ S YNSV+
Sbjct: 488 KMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVID 547
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL ++++ DEA + M + P V + I G+C G V D F +M G V
Sbjct: 548 GLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVA 607
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
N + Y LIH +CQ + A ++ +EM G P T +L+GL + + A++
Sbjct: 608 NAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 178/371 (47%), Gaps = 30/371 (8%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
M+P + F+ +++ LVKE +M+ G+ + TY ++ G NR+
Sbjct: 314 MSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAE 373
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
++ ++M ++G P+ + ++ LI C +V L+ +M N +T++ LI +
Sbjct: 374 RMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGF 433
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
C+ NL AL LL++ S G P+VVT +L+ LC+ G++ DA+E+ + + K
Sbjct: 434 CQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKV------MQKS 487
Query: 218 K---GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
K ++E P+V TYNILI G A +++ +M G+ + +TY
Sbjct: 488 KMDLDASHPFNDVE-----PDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITY 542
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEY 330
+++I GLC R+D+ ++ M GSKG SP + +++ G + + + LE
Sbjct: 543 NSVIDGLCKQSRLDEATQMFDSM-----GSKG-FSPDVVTFTTLINGYCKVGRVGDGLEV 596
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+M + + A+ I GFC GN+ A F +MI G P+ + ++
Sbjct: 597 FCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS 656
Query: 389 EERVREASELM 399
+E ++ A + +
Sbjct: 657 KEELKRAVQCL 667
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 163/356 (45%), Gaps = 37/356 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA-RA 66
PD F +I L + + + + + + P+ +NS++D K++ +D A R
Sbjct: 316 PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERM 375
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
FY M G D T++IL+ G C RV DG KLLH M RG+ N++ Y TLIH
Sbjct: 376 FYL--MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGF 433
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL----------LEK 172
C+ G + A L+ +M PN VT + L+ C L +AL + L+
Sbjct: 434 CQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDA 493
Query: 173 SFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLG 215
S F V PDV T ++ L + G+ +A E+ EE +G +
Sbjct: 494 SHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQS 553
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
++ + M KG P+V T+ LI+ YC+ G + L+VF +M GI N +TY
Sbjct: 554 RLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYR 613
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
TLI G C G I+ L I Q M S G ++L GL+ + + A++ L
Sbjct: 614 TLIHGFCQVGNINGALDIFQEMISS--GVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 327 ALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
AL ++ KL P V S + G CV+ V +A F Q+ + PNV+ + L++
Sbjct: 130 ALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK----PNVIAFTTLMN 185
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
C+E RV EA L+ M G P T+ T++ G+C+ G+ +AL L+ + M + R
Sbjct: 186 GLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRK-MEEVSRI 244
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
P YS +I L + G A L +M KGI P+ T+N ++ W
Sbjct: 245 K-PNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRW 299
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 217/446 (48%), Gaps = 32/446 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDL 63
++ P+ F T+I GL ++ V D + P L + ++++ L K DIDL
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + KKM ++ D Y ++ LC V D L M ++G++PN V YN+LI
Sbjct: 239 ALSLL-KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC G+ A L+SDM E PN VTFS LI A+ KE LV A L ++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD+ T + ++ C R+ +A + E M K C PNV TY
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTY 398
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI +C+ ++ +++F +M G+ N VTY+TLI+GL G D KI + M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM-- 456
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGN 356
+G I Y+ +L GL + + ++AL EYL Q K+ P ++ I G C G
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VED F + +G PNV+IY +I +C++ EA L +EM G LP + T+NT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIG 442
++ R G+ + +L++E MR G
Sbjct: 576 LIRARLRDGDKAASAELIKE-MRSCG 600
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 215/438 (49%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M Q + T+ L+ GL L N+ + L+ M +RG +P+ Y T+++ LCK G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A SL+ ME E + V ++ +I A C +N+ +AL L + + G P+VVT
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M N VTY+TLI+G C R+++G
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G YN+++ GL++ D A + K+M + + P + S+ +
Sbjct: 415 MELFREM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +E A F+ + + P++ Y+ +I C+ +V + +L ++ G
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P + T++SG CR+G A L E G+LP SG Y+ LI+A G ++
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKED---GTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G + D T
Sbjct: 590 AELIKEMRSCGFVGDAST 607
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 221/462 (47%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + DL + ++M + D Y+Y IL+ C +++
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISL-GERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
+L M G +P+ V ++L++ C ++ A +L+ M +PN VTF+ LI
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ + G PD+ T V+ LC G + A+ +L
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL------------- 243
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
K+ME+ +V Y +I + C ++ AL++F +M GI N VTY++LI
Sbjct: 244 ------KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
R LC+ GR D ++L M + K + +++++ +E + EA EKL+
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPN--VVTFSALIDAFVKEGKLVEA-------EKLY 348
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ I GFC+ +++AK F+ MI + PNVV Y+ LI +C+
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV E EL +EM+ G + T+NT++ GL + G+ A K+ + + + G P
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSDGVPPDI 465
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC+ G + A ++ + + PD T+N ++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 187/416 (44%), Gaps = 30/416 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL---MSDME 143
L + + L ++ D L M P+ V +N L+ ++ K K SL M ++
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 144 EPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
D+ +++ILI +C+ L AL +L K G+ PD+VT++ +L C R+ +AV
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++++ F+ E + PN T+N LI A+ + + M
Sbjct: 171 ALVDQ--------------MFVMEYQ-----PNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + TY T++ GLC G ID L +L+ ME K + + Y +++ L
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK--IEADVVIYTTIIDALCNYK 269
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
++AL +M+ + P V + I C G DA R MIE PNVV +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI A+ +E ++ EA +L EM P T++++++G C + A + E
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE---LM 386
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I + P Y+ LIK C+ + L +M +G++ + +T+N+L+ L Q
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 7/251 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+D+F +M + V ++ L+ + + D + + + M++ + + Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD--LYSY 118
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ R +Q AL L +M KL P V S + G+C + +A DQM
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
PN V ++ LIH + EA L+ M G P T+ TV++GLC++G++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L+++ +G + Y+ +I ALC A L +M KGI P+ +T+NS
Sbjct: 239 ALSLLKKMEKGKIEADVV---IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 490 LLICLSQQTTW 500
L+ CL W
Sbjct: 296 LIRCLCNYGRW 306
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 22/297 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ F +I + + + K D + + ++ P + ++S+++ D +D A+
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ + TY L+KG C RV +G +L M RG+ N+V YNTLI L
Sbjct: 383 F-ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD P+ +T+SIL+ CK L ALV+ E PD+
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEM 227
T ++E +C G+V D ++ +G + G CR +EM
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ G LPN TYN LI + G ++ ++ +M+ G + T +I L G
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 246/510 (48%), Gaps = 28/510 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F +IRG +A ++ + F++ P + IFN ++ L K+ + D A
Sbjct: 60 PNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKL 119
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK--PNSVIYNTLIHS 125
+ + M +S V+ + TY ++ GLC + + +LL M +G K P+ V YNTLI++
Sbjct: 120 F-ENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINA 178
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+ ++ A + M+ P+ +T +IL+ CK+ ++ AL +L+ G VPD
Sbjct: 179 FYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPD 238
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRL-------------GKVKGGCRFLKEME 228
V+T ++ LC G+V++A EIL+ L G + L+EM
Sbjct: 239 VITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMC 298
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R+ LP+V TY IL++ C G + A + ++ G + + Y +L+ GLC G I+
Sbjct: 299 RENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIE 358
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
+ K+++ M S G + + Y+S++ G R +A E L +M + P ++
Sbjct: 359 EAHKLVKEM--SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G DG++ A ++ G VP+VV Y+ LI C+ RVREA +L EM G
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T +V+ GLCR G V A LV E R + P Y+ LI LC+
Sbjct: 477 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR---KRHAPNVVVYTSLIDGLCKSDRMD 533
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
A M+L M G+G+ D + L++ +S
Sbjct: 534 DACMVLDAMRGQGVALDDFAYRKLIVSMSH 563
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 225/451 (49%), Gaps = 35/451 (7%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+N +LD+LVK K ++ SG + T+ IL++G C + + L +
Sbjct: 30 YNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALD 89
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLV 164
V P+ I+N LIH L K+G +A L +ME +P VT++ +I CK NL
Sbjct: 90 EFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLE 149
Query: 165 NALVLLEKSFSFG--FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
A LLE+ G PD+VT ++ R+ +A C
Sbjct: 150 KARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA-------------------CA 190
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F ++M+ G P+V T NIL+S C+ G ++ AL++ + MK+ G + +TY+++I LC
Sbjct: 191 FREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALC 250
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
G++ + +IL+ M S + + +N++L G + ALE L++M E + P
Sbjct: 251 VAGKVVEAAEILKTMSCSPD-----LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ ++ + G C G V+ A ++++ +G +P+V+ Y L+ C+ + EA +L+K
Sbjct: 306 VITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 365
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM+ G +++++SG CR GNV A +++ E + +P Y+ ++ L
Sbjct: 366 EMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAE---MVSINMVPPLFTYNIVLGGLI 422
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G A L+ +V +G +PD +T+N+L+
Sbjct: 423 KDGSISKAVSLISDLVARGYVPDVVTYNTLI 453
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/489 (27%), Positives = 227/489 (46%), Gaps = 34/489 (6%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRF-----NMTPSLKIFNSILDVLV 57
S + P+ + TVI GL ++ ++ KA +L+ P + +N++++
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKS---GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFY 180
Query: 58 KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+ +R+KM A+G+ D T IL+ G+C V + ++L MK G P+ +
Sbjct: 181 RASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVI 240
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
YN++IH+LC GKV A ++ M P+ VTF+ L+ +CK L AL +LE+
Sbjct: 241 TYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGG 220
+PDV+T T ++ LC VG+V A +LEE QG + G+++
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ +KEM +GC V Y+ L+S YC G + A ++ +M + TY+ ++ G
Sbjct: 361 HKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGG 420
Query: 281 LCSGGRIDDGLKILQLMED-SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
L G I K + L+ D G + YN+++ GL + N+ EA + +M
Sbjct: 421 LIKDGSIS---KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
FP V + G C G V+DA +M + PNVV+Y LI C+ +R+ +A
Sbjct: 478 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACM 537
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
++ M G G + ++ + G V A+ + +E + RG LP L +
Sbjct: 538 VLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDE---MVARGFLPDGSTSKTLEE 594
Query: 458 ALCEKGGFQ 466
A F+
Sbjct: 595 AAMSNSVFE 603
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 144/269 (53%), Gaps = 14/269 (5%)
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E+ G +V +YN L+ ++G V+ D+ G S N VT+ LIRG C G+
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRS 345
L+ L+ +++ I +N +++GL+++ D+A++ + ME ++ P V +
Sbjct: 79 MRALEFLRALDEFSVAPDVYI--FNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYN 136
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMT 403
I G C GN+E A+ ++MI +GG P++V Y+ LI+A+ + R+REA ++M
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMK 196
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEK 462
G P T N ++SG+C+ G+V AL++++ G+ G +P Y+ +I ALC
Sbjct: 197 AAGINPDVLTCNILVSGICKDGDVEEALEILD----GMKLAGPVPDVITYNSIIHALCVA 252
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A+ +L M PD +T+N+LL
Sbjct: 253 GKVVEAAEILKTM---SCSPDLVTFNTLL 278
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 235/494 (47%), Gaps = 37/494 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + VI G A ++ ++ + + P I+ + D+D A
Sbjct: 110 PDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDH 169
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R + G + TY L+ ++ + KLL M+ RG PN V YN L+ +LC
Sbjct: 170 LR----SMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K VG A+ ++ M E PN +TF+ L+ +CK N+ +A LL + G P+VV
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + +++ LC + ++A E+LEE +G + K++ + L+ M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GC P+V Y+ +I ++C++G L A +M+ S + VTY+T+I GLC G+I
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405
Query: 288 DDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKL--FPRA 341
+ IL+ M++S G + P Y++V+ GL + + EA + L +M K P
Sbjct: 406 AEAQVILEQMQES-----GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDV 460
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + I G C G +E+A+ M G PNVV Y LI C+ +V EA +M+E
Sbjct: 461 VTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEE 520
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G P T+NT+++GLC G + A +LV+ G S P + Y ++ AL
Sbjct: 521 MRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECS-PDAATYRTIVNALMS 579
Query: 462 KGGFQSASMLLVQM 475
Q A LL QM
Sbjct: 580 SDLVQEAEQLLEQM 593
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 206/400 (51%), Gaps = 23/400 (5%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNA 166
G + +N+L+ L + K A RS + EP+ +++I+I +C +L A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG-------------EQGR 213
L LLE+ S GF PD T T ++ + + G + A++ L G R
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFAR 191
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
K++ + L+EM +GC PN+ TYN+L+ + C+ ++ +A DV M G + N +T
Sbjct: 192 AKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
+++L+ G C G +DD K+L +M +G + + Y++++ GL + + EA E L++
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIM--VAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M+ + P A S I G C +E+A++ +M G P+VV+Y +IHA+C+ +
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ EA + ++EM P T+NTV+ GLC+ G + A +++ E M+ G LP
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA-QVILEQMQESG-DVLPDVVT 427
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS +I LC+ A LL +M G PD +T+ +++
Sbjct: 428 YSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 467
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 256/522 (49%), Gaps = 44/522 (8%)
Query: 9 PDESIFI---TVIRGLGRARMINDVVKATDLVSRFNMTP-SLKIF-------NSILDVLV 57
PD S F T R +GR ++N + A ++ F P S+ F NS+L VLV
Sbjct: 31 PDLSPFSGASTTPRIVGR--VVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLV 88
Query: 58 K-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
+ + A +R +++AS + D +Y I++ G C + +LL MKS G P++
Sbjct: 89 RCKKHREAGDLFRSELLAS-CEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDA 147
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+ +I ++ G + A + M +PN VT++ LI A+ + + L A+ LLE+
Sbjct: 148 FTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRE 207
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
G P++VT +++ LC + V A +++++ E G + G V
Sbjct: 208 RGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDD 267
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ L M KG PNV TY+ LI C++ A +V +MK G++ + TY LI
Sbjct: 268 ARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIH 327
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-- 337
GLC +I++ ++L+ M S G + Y+S+++ + + EA + L++M K
Sbjct: 328 GLCKADKIEEAEQMLRRMAGS--GCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 385
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREAS 396
P V + I G C G + +A+ +QM E G V P+VV Y +I+ C+ + + EA
Sbjct: 386 SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 445
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPL 455
+L+ M G P T+ T++ GLC+ G + A L ++G+ R G P Y+ L
Sbjct: 446 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYL----LQGMKRAGCAPNVVTYTTL 501
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
I LC+ A ++ +M G P+ +T+N+++ +C+S
Sbjct: 502 ISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVS 543
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 181/348 (52%), Gaps = 21/348 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +++ G + ++D K ++ M P++ +++++D L K L
Sbjct: 247 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 306
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M GV D +TY+ L+ GLC +++ + ++L M G P+ V+Y+++IH+ CK
Sbjct: 307 LEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVV 183
+GK+ A+ + +M + P+ VT++ +I CK + A V+LE+ G V PDVV
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + V+ LC +++A ++L+ + G + G+++ L+ M
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+R GC PNV TY LIS C+ +D A V +M+ G N VTY+T++ GLC GRI
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+ +++Q M+D + + Y +++ L + EA + L+QM+
Sbjct: 547 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN V+ G ALE L++M+ P A + I G+++ A D
Sbjct: 112 VCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MD 168
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+ G PNVV Y LI A+ + +++ EA +L++EM G P T+N ++ LC+
Sbjct: 169 HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLS 228
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
VG A +V++ + G G P ++ L+ C++G A LL MV KG+ P+ +
Sbjct: 229 MVGAAQDVVKKMIEG---GFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285
Query: 486 TWNSLL--ICLSQQ 497
T+++L+ +C SQ+
Sbjct: 286 TYSALIDGLCKSQK 299
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 247/503 (49%), Gaps = 42/503 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
D + T+I+GL I++ + + + P + +++ L + +I+ A +
Sbjct: 225 DIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLH 284
Query: 69 RKKMMASGVQGDD-----YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++ + +G G +Y+I++ GLC R + +L MK++G+ P+ + Y TLI
Sbjct: 285 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLI 344
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H C +GK +A+ L ++M +P+ T S+LI CK+ ++ A LLE G +
Sbjct: 345 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 404
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PDVVT T +++ LC R+ A ++ FLK M++ GC+PNV T
Sbjct: 405 PDVVTCTTLVKGLCMKHRISKATQL------------------FLK-MQKLGCMPNVVTC 445
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISW------NFVTYDTLIRGLCSGGRIDDGLKI 293
L+ C++G + AL++ +M D + N ++Y +I GLC GR D+ ++
Sbjct: 446 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGF 351
+ M+ G + Y S+++G R + +A +M + P S+ I
Sbjct: 506 FKEMK--ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +G V +A + MI+ G +PN V Y L+ C +R+ EA++L +M G LP
Sbjct: 564 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 623
Query: 412 STFNTVLSGLCRQGNVGTALKLVEE---DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
T+ T++ GLC+ GN+ TAL+L ++ D G P YS +I LC+ G A
Sbjct: 624 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEA 683
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L +M G++P+ +++ SL+
Sbjct: 684 RELFKEMKALGVIPNVISYTSLI 706
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 248/542 (45%), Gaps = 71/542 (13%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P + ++D+ KE + + M+ G D TY+ L+KGLC+ +R+ +
Sbjct: 6 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----------EPNDVTFS 151
+L MK G +P+++ Y TL+ LC+ GK+ A L +M +P V++S
Sbjct: 66 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
I+I CK+ A L ++ + G +PDV++ T ++ C G+ A + E +
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + GKV L+ M ++GC+ ++ TY+ LI C + A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--EDSKEGSKGR--ISPY 311
+F M+ G + + Y TL++GLC G I+ L++ Q M + + G K + + Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM-- 367
+ ++ GL ++ ++DEA E K+M+ + P + + I GFC+ G E AK F++M
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365
Query: 368 ---------------------------------IEEGGVPNVVIYDCLIHAYCQEERVRE 394
I+ G +P+VV L+ C + R+ +
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE---EDMRGIGRGSLPGSGH 451
A++L +M G +P T T++ GLC+ GN+ AL+L + D G P +
Sbjct: 426 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 485
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
YS +I LC+ G A L +M G++PD +++ SL+ + W L NEMV
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545
Query: 511 SF 512
Sbjct: 546 DI 547
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/517 (26%), Positives = 236/517 (45%), Gaps = 79/517 (15%)
Query: 26 MINDVVKATDLVSRFNMTPSLK----IFNSILDVLVKEDIDLARAFYR------------ 69
M+ DV+ T L+ F + + +FN +LDV ++ D+ +
Sbjct: 152 MMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEAN 211
Query: 70 ---KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M+ G D TY+ L+KGLC+ +R+ + +L M+ G +P+++ Y TL+ L
Sbjct: 212 ELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGL 271
Query: 127 CKNGKVGRARSLMSDME----------EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
C+ G + A L +M +P +++SI+I CK+ A L ++ +
Sbjct: 272 CQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQ 331
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G +PDV++ T ++ C G+ A + E + G + GKV
Sbjct: 332 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEA 391
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ L+ + ++GC+P+V T L+ C + A +F M+ G N VT TL++G
Sbjct: 392 NKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKG 451
Query: 281 LCSGGRIDDGLKILQ-LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
LC G I L++ + ++ D+ SPY P
Sbjct: 452 LCQSGNIKIALELHKNMLSDT--------SPYGI----------------------NCKP 481
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
A+ S+ I G C G ++A+ F +M G +P+V+ Y LIH +C+ + ++A L
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 541
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
EM G P +TF+ ++ LC++G V A +L+E I RG +P + Y+ L+K L
Sbjct: 542 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLE---VMIQRGCIPNTVTYTTLVKGL 598
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
C A+ L ++M G LPD +T+ +L+ L Q
Sbjct: 599 CMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 635
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 203/443 (45%), Gaps = 58/443 (13%)
Query: 26 MINDVVKATDLVSRFNMTPSLK----IFNSILDVLVKEDIDLA-----------RAFYRK 70
++ DV+ T L+ F ++ + +FN +LDV ++ D+ + +
Sbjct: 333 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEAN 392
Query: 71 KMMASGVQ----GDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K++ +Q D T L+KGLC+ +R+ +L M+ G PN V TL+ L
Sbjct: 393 KLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 452
Query: 127 CKNGKVGRA----RSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
C++G + A ++++SD +PN +++SI+I CK A L ++ +
Sbjct: 453 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL 512
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G +PDV++ T ++ C R GK K EM G P+V
Sbjct: 513 GVIPDVISYTSLIHGFC-------------------RSGKWKDAKYLFNEMVDIGVQPDV 553
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
T+++LI C+ G + A ++ M G N VTY TL++GLC RI + ++
Sbjct: 554 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 613
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--------EKLFPRAVDRSLKI 348
M+ K G + Y +++ GL + ALE K+M P + S+ I
Sbjct: 614 MQ--KLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 671
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G ++A+ F +M G +PNV+ Y LIH +C+ ++ +A L EM G
Sbjct: 672 DGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 731
Query: 409 PIASTFNTVLSGLCRQGNVGTAL 431
A T++ ++ G C++G + AL
Sbjct: 732 LNAVTYSVMIHGFCKEGQIDKAL 754
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 154/362 (42%), Gaps = 84/362 (23%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+V T +LI +C+ G + A ++ M G + VTY TLI+GLC RI +
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 291 LKIL------------------------------------QLMEDSKE---GSKGRISPY 311
++ +++ D+ + K + Y
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ--- 366
+ ++ GL ++ ++DEA E K+M+ + P + + I GFC G E AK F++
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 367 --------------------------------MIEEGGVPNVVIYDCLIHAYCQEERVRE 394
MI+ G + ++V Y LI C + R+ E
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL---PGSGH 451
A+ L M G P A + T++ GLC+ GN+ TAL+L +E + GR + P
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTW-LLLLLLNE 508
YS +I LC+ A L +M +GI+PD +++ +L+ CLS + W L NE
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK--WEKAKCLFNE 362
Query: 509 MV 510
M+
Sbjct: 363 ML 364
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 39/183 (21%)
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL-------- 418
M+ G P+V LI +C+E +V EA+EL++ M G + T++T++
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 419 ---------------------------SGLCRQGNVGTALKLVEE---DMRGIGRGSLPG 448
GLC+ G + AL L +E D G P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-LLLLLLN 507
YS +I LC+ A L +M +G++PD +++ SL+ + W L N
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 508 EMV 510
EM+
Sbjct: 181 EML 183
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 236/518 (45%), Gaps = 39/518 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP F ++ + + + V ++ + F + P + N +L+ L
Sbjct: 61 MHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLN----ILINSFCHLN 116
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G+Q D T+ L++GLC+ ++GD L M G +PN V Y
Sbjct: 117 RPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYG 176
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ ME +P+ V ++ +I + CK+ + A L K
Sbjct: 177 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 236
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD+ T T ++ LC+ L + K L +M +P+V
Sbjct: 237 GISPDIFTYTSLIHSLCN-------------------LCEWKHVTTLLNQMINSKIMPDV 277
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
++ ++ + C+ G + A DV + M I G+ N VTY+ L+ G C +D+ +K+
Sbjct: 278 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 337
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M G + YN+++ G + + D+A ++M ++L P V + + G C
Sbjct: 338 M--VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++DA F +M+ G +P++ Y L+ C++ + EA L+K + G P +
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
V+ G+CR G + A + +G P Y+ +I LC +G A+ L ++
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLS---SKGLRPNVRTYTIMINGLCRRGLLDEANKLFME 512
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
M G G PD T+N++ L Q L + LL EM++
Sbjct: 513 MDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLA 550
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 216/426 (50%), Gaps = 30/426 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ S V + YTY IL++G C + G M+ G PN V YNTLI + CK G+
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A L+ M +PN ++++++I C+E ++ A +LE+ GF PD VT
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L C G A+ I EM R G P+V TY LI+S C
Sbjct: 121 LLNGYCKEGNFHQALVI-------------------HAEMVRNGVSPSVVTYTALINSMC 161
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ L+ A++ F+ M+I G+ N TY TLI G G +++ +IL M +S G
Sbjct: 162 KARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES--GFSPS 219
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN+ ++G + +EAL +++M + L P V S I GFC G ++ A +
Sbjct: 220 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 279
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+E+G P+ V Y LI C+ R+ EA +L +EM G P T+ T+++ C +G
Sbjct: 280 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 339
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
++ AL L +E I +G LP + YS LI L ++ + A LL +++ + +P +
Sbjct: 340 DLNKALHLHDEM---IHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 396
Query: 486 TWNSLL 491
T+++L+
Sbjct: 397 TYDTLI 402
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 216/464 (46%), Gaps = 42/464 (9%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M +G + TY L+ C R+ + F LL M S+G++PN + YN +I+ LC+ G
Sbjct: 35 EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREG 94
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A ++ +M P++VT++ L+ YCKE N ALV+ + G P VVT T
Sbjct: 95 SMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYT 154
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ +C + A+E ++ +G R G + R L EM
Sbjct: 155 ALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 214
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+V TYN I +C ++ AL V +M G++ + V+Y T+I G C G +D
Sbjct: 215 GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRA 274
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ Q M ++G Y+S++ GL + EA + ++M L P + I
Sbjct: 275 FQMKQEM--VEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLI 332
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
+CV+G++ A D+MI +G +P+ V Y LI+ ++ R REA L+ ++ +
Sbjct: 333 NAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESV 392
Query: 409 PIASTFNTVLS---------------GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
P T++T++ G C +G + A ++ E + R PG Y+
Sbjct: 393 PSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE---RNHKPGEAVYN 449
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+I C G A L +M+ G +P +T +L+ L ++
Sbjct: 450 VIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKE 493
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 219/488 (44%), Gaps = 72/488 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + +IRG + + + R P++ +N+++D K ID A
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M + G+Q + +Y +++ GLC + + +++L M +G P+ V YNTL++ C
Sbjct: 68 L-KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G +A + ++M P+ VT++ LI + CK NL A+ ++ G P+
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGR----------------LGKVKGGCRFLKEM 227
T T +++ G + +A IL E E G L +++ ++EM
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG P+V +Y+ +IS +C G LD A + +M G+S + VTY +LI+GLC R+
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306
Query: 288 DDGLKILQLMEDSK-----------------EGS-------------KGRIS---PYNSV 314
+ + Q M D EG KG + Y+ +
Sbjct: 307 TEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVL 366
Query: 315 LYGLYRENQQDEALEYLKQM--EKLFPRAVD-------------RSLKIL--GFCVDGNV 357
+ GL ++ + EA L ++ E+ P V +S+ L GFC+ G +
Sbjct: 367 INGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLM 426
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+A R F+ M+E P +Y+ +IH +C+ + +A L KEM G++P T T+
Sbjct: 427 HEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITL 486
Query: 418 LSGLCRQG 425
+ L ++G
Sbjct: 487 IKALFKEG 494
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 21/230 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I+GL R + + + + + P + ++++ E DL +A +
Sbjct: 288 PDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG-DLNKALH 346
Query: 69 -RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS-- 125
+M+ G D TY++L+ GL R + +LL + P+ V Y+TLI +
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406
Query: 126 -------------LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALV 168
C G + A + M E P + ++++I +C+ NL A
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
L ++ GFVP VT+ +++ L G + E++ ++ RL + +
Sbjct: 467 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAE 516
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 226/435 (51%), Gaps = 32/435 (7%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--- 144
++ L T + +GFK L M G P+ + TLI C+ GK +A ++ +E
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ +T++++I YCK + NAL +L++ PDVVT +L LC G++ A+E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L+ ++ R V + L EM +GC P+V TYN+L++ C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G LD A+ NDM G N +T++ ++R +CS GR D K+L M ++G
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM--LRKGFSPS 343
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ +N ++ L R+ A++ L++M K P ++ + + GFC + ++ A +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+ G P++V Y+ ++ A C++ +V +A E++ +++ G P+ T+NTV+ GL + G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
G A+KL++E MR + P + YS L+ L +G A + G+ P+ +
Sbjct: 464 KTGKAIKLLDE-MR--AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAV 520
Query: 486 TWNSLL--ICLSQQT 498
T+NS++ +C ++QT
Sbjct: 521 TFNSIMLGLCKTRQT 535
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 223/493 (45%), Gaps = 78/493 (15%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ D++ T L+ F + IL+VL SG D TY +
Sbjct: 134 VPDIIPCTTLIRGFCRMGKTRKAAKILEVL----------------EGSGAVPDVITYNV 177
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ G C + + +L M V P+ V YNT++ SLC +GK+ +A ++ M +
Sbjct: 178 MISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ +T++ILI A C++ + A+ LL++ G PDVVT ++ +C GR+ +A+
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+FL +M GC PNV T+NI++ S C TG A + DM
Sbjct: 295 -------------------KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G S + VT++ LI LC G + + IL+ M K G + YN +L+G +E
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM--PKHGCQPNSLSYNPLLHGFCKEK 393
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ D A+EYL++M +P V + + C DG VEDA +Q+ +G P ++ Y+
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+I + + +A +L+ EM P T+++++ GL R+G V A+K E R
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 441 --------------------------------IGRGSLPGSGHYSPLIKALCEKGGFQSA 468
I RG P Y+ LI+ L +G + A
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573
Query: 469 SMLLVQMVGKGIL 481
LL ++ KG++
Sbjct: 574 LELLNELCNKGLM 586
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 209/434 (48%), Gaps = 30/434 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G +A IN+ + D R +++P + +N+IL L
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ D TY IL++ C + VG KLL M+ RG P+ V YN L++ +CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A ++DM +PN +T +I++ + C ++A LL GF P VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC G + A++ILE +M + GC PN +YN L+
Sbjct: 347 FNILINFLCRKGLLGRAIDILE-------------------KMPKHGCQPNSLSYNPLLH 387
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ +D A++ M G + VTY+T++ LC G+++D ++IL + S +G
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL--SSKGC 445
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YN+V+ GL + + +A++ L +M + L P + S + G +G V++A +
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + G PN V ++ ++ C+ + A + + M G P +++ ++ GL
Sbjct: 506 FFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565
Query: 423 RQGNVGTALKLVEE 436
+G AL+L+ E
Sbjct: 566 YEGMAKEALELLNE 579
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/435 (31%), Positives = 222/435 (51%), Gaps = 28/435 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D T+ I + GLC +R+GD + M+ G PN + YN L+ LC G++ A++L
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 140 SDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
M P+ VT++ L+ +CK L AL + + + GFVPDVVT ++ C
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 196 GRVMDAVEILEESGEQGRLGK-------VKGGCRFLKEMER------KGCLPNVDTYNIL 242
++ +A IL+ + + V G C+ + E KG PNV TY+ L
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTL 228
Query: 243 ISSYC-ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
IS C E L+SA + M ++G + V+Y+ LI GL + + LK+ + +
Sbjct: 229 ISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSV--LR 286
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
+G + + YN ++ GL +E++ +EA E + K L P A+ ++ I G C G VED
Sbjct: 287 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 346
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M E+G VP+VV ++ +I+ C+E+RV EA L+ M G P A +FNT++
Sbjct: 347 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 406
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC---EKGGFQSASMLLVQMV 476
G CR G A+ +E ++ RG P Y+ L+ LC ++G + A L M+
Sbjct: 407 GQCRAGKWKKAMTTFKEMLK---RGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463
Query: 477 GKGILPDYLTWNSLL 491
KG +PD +T+++L+
Sbjct: 464 EKGRVPDVVTYSALI 478
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/519 (29%), Positives = 247/519 (47%), Gaps = 44/519 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
D S F I GL RA I D D + + P+ +N++L L + A+A Y
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ +G D TY L+ G C ++ + K+ RG P+ V YN LI+ CK
Sbjct: 109 -ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCK 167
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K+ A+ ++ M P+ VT++ L+ CK + A +L+ GF P+V+T
Sbjct: 168 ADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVIT 224
Query: 185 ITKVLELLC-SVGRVMDAVEILEE--------------------SGEQGRLGKVKGGCRF 223
+ ++ LC + R+ A ++LE+ + EQG V +
Sbjct: 225 YSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG----VSEALKL 280
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ R+G P V TYNILI + ++ A ++F+ + G+ + +TY I GLC
Sbjct: 281 FGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 340
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
GR++D L +L+ M++ +G + +N+V+ GL +E + DEA L ME P A
Sbjct: 341 AGRVEDALLMLKDMDE--KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 398
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC---QEERVREASEL 398
+ + I G C G + A F +M++ G P VV Y+ L+ C QE R++EA L
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 458
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M G +P T++ ++ GL + G + A +L+ M +G +P Y+ LI
Sbjct: 459 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA-ME--AKGCIPNVYTYNSLISG 515
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LC A L V MV KG +PD +T+ +++ L +Q
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQ 554
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 218/475 (45%), Gaps = 39/475 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +I G +A +++ + + ++ P + +NS+++ L K +D AR
Sbjct: 153 PDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML 212
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLT-NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K + V TY+ L+ GLC R+ +LL M G KP+ V YN LIH L
Sbjct: 213 IVDKGFSPNV----ITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGL 268
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+ V A L + EP T++ILI KE+ + A L G PD
Sbjct: 269 AREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 328
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T T ++ LC GRV DA+ +L K+M+ KGC+P+V ++N +
Sbjct: 329 ITYTVFIDGLCKAGRVEDALLML-------------------KDMDEKGCVPDVVSHNAV 369
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ C+ +D A + + M+ G S N ++++TLI G C G+ + + M K
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM--LKR 427
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF-----PRAVDRSLKILGFCVDGNV 357
G K + YN ++ GL + Q+ E + + + P V S I G G +
Sbjct: 428 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 487
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+DA+R M +G +PNV Y+ LI C ++V EA EL M G +P T+ T+
Sbjct: 488 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTI 547
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+S LC+Q V AL L + + G +P SG Y LI LC A LL
Sbjct: 548 ISALCKQEMVDKALALFDGSLEA---GVVPTSGMYFSLIDGLCAVARVDEALKLL 599
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 243/507 (47%), Gaps = 30/507 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + ++ GL ++D + + + +P + +N++L K +D A
Sbjct: 83 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKI 142
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + G D TY L+ G C +++ + ++L M S + P+ V YN+L++ LC
Sbjct: 143 F-DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLC 201
Query: 128 KNGKVGRARSLMSDME-EPNDVTFSILICAYCKE-ENLVNALVLLEKSFSFGFVPDVVTI 185
KNG+V AR L+ D PN +T+S LI C+E L +A LLEK G PD+V+
Sbjct: 202 KNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSY 261
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
++ L V +A+++ QG + +V + +
Sbjct: 262 NALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVK 321
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P+ TY + I C+ G ++ AL + DM G + V+++ +I GLC R+D+
Sbjct: 322 HGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDE 381
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+L ME +K S IS +N+++ G R + +A+ K+M K + P V ++
Sbjct: 382 AEVLLSGME-AKGCSPNAIS-FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 439
Query: 348 ILGFC---VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ G C +G +++A FD MIE+G VP+VV Y LI + ++ +A L+ M
Sbjct: 440 VDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEA 499
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G +P T+N+++SGLC V AL+L + + +G +P + Y +I ALC++
Sbjct: 500 KGCIPNVYTYNSLISGLCGLDKVDEALELF---VAMVEKGCVPDTITYGTIISALCKQEM 556
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A L + G++P + SL+
Sbjct: 557 VDKALALFDGSLEAGVVPTSGMYFSLI 583
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 213/430 (49%), Gaps = 39/430 (9%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D YT IL++ L + ++ + + + +G+ S +N I LC+ ++G A+++
Sbjct: 15 DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDIST-FNIYISGLCRASRIGDAQTVF 73
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
M + PN +T++ L+ C + +A L E+ G+ PDVVT +L C V
Sbjct: 74 DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G++ +A++I + G VK +G +P+V TYN LI+ +C+ LD A
Sbjct: 134 GKLDEALKIFD--------GAVK-----------RGFVPDVVTYNALINGFCKADKLDEA 174
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ M + + + VTY++L+ GLC GR+D+ ++ +G + Y++++
Sbjct: 175 QRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLI-----VDKGFSPNVITYSTLI 229
Query: 316 YGLYRENQQDEALEYLKQMEKLF-----PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
GL RE ++ E+ L +EK+ P V + I G + V +A + F ++ +
Sbjct: 230 SGLCRELRRLESARQL--LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G P V Y+ LI +E+RV EA EL + HG P A T+ + GLC+ G V A
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L L+ +DM +G +P ++ +I LC++ A +LL M KG P+ +++N+L
Sbjct: 348 L-LMLKDMDE--KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404
Query: 491 LICLSQQTTW 500
+ + W
Sbjct: 405 ICGQCRAGKW 414
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 172/349 (49%), Gaps = 29/349 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +I GL R + +++ +K V R P + +N ++D L+KED ++ A
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL 315
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++ G++ D TY + + GLC RV D +L M +G P+ V +N +I+ LC
Sbjct: 316 F-SGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLC 374
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +V A L+S ME PN ++F+ LIC C+ A+ ++ G P VV
Sbjct: 375 KEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVV 434
Query: 184 TITKVLELLCSV---GRVMDAVEILEESGEQGRL----------------GKVKGGCRFL 224
T +++ LC GR+ +A+ + + E+GR+ GK+ R L
Sbjct: 435 TYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLL 494
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
ME KGC+PNV TYN LIS C +D AL++F M G + +TY T+I LC
Sbjct: 495 GAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQ 554
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISP-YNSVLYGLYRENQQDEALEYLK 332
+D K L L + S E S Y S++ GL + DEAL+ L+
Sbjct: 555 EMVD---KALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 218/424 (51%), Gaps = 32/424 (7%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
DGFK L M RG P+ + +LI C+ GK +A +M +E+ P+ +T+++LI
Sbjct: 132 DGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 191
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-- 212
YCK + NAL +L++ PDVVT +L LC G++ A+E+L+ ++
Sbjct: 192 SGYCKSGEIDNALQVLDR---MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY 248
Query: 213 --------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ V + L EM KG P+V TYN+LI+ C+ G LD A+
Sbjct: 249 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 308
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
N+M G N +T++ ++R +CS GR D K+L M ++G + +N ++ L
Sbjct: 309 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM--LRKGCSPSVVTFNILINFL 366
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R+ A++ L++M P ++ + + GFC + ++ A D M+ G P++
Sbjct: 367 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 426
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y+ L+ A C++ +V A E++ +++ G P+ T+NTV+ GL + G A+KL++E
Sbjct: 427 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 486
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICL 494
R +G P YS L+ L +G A + G GI P+ +T+NS++ +C
Sbjct: 487 MRR---KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCK 543
Query: 495 SQQT 498
S+QT
Sbjct: 544 SRQT 547
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 226/480 (47%), Gaps = 35/480 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD ++IRG R +++ + P + +N ++ K +ID A
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +A V TY +++ LC + ++ ++L + P+ + Y LI + C
Sbjct: 207 LDRMNVAPDV----VTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 262
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K VG+A L+ +M +P+ VT+++LI CKE L A+ L S+G P+V+
Sbjct: 263 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L +CS GR MDA + L +M RKGC P+V T+NILI
Sbjct: 323 THNIILRSMCSTGRWMDAE-------------------KLLSDMLRKGCSPSVVTFNILI 363
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C G+L A+D+ M + G + N ++Y+ L+ G C ++D ++ L +M G
Sbjct: 364 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM--VSRG 421
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN++L L ++ + D A+E L Q+ P + + I G G E A
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D+M +G P+++ Y L+ +E +V EA + ++ G G P A T+N+++ GL
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 541
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ A+ + I + P Y+ LI+ + +G + A LL ++ +G++
Sbjct: 542 CKSRQTDRAIDFLA---YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 210/431 (48%), Gaps = 35/431 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G ++ I++ ++ D R N+ P + +N+IL L D +
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLC----DSGKLKQ 234
Query: 69 RKKMMASGVQGDDY----TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+++ +Q + Y TY IL++ C + VG KLL M+++G KP+ V YN LI+
Sbjct: 235 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 294
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+CK G++ A +++M +PN +T +I++ + C ++A LL G P
Sbjct: 295 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 354
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
VVT ++ LC G + A++ILE+ G + K+ +L
Sbjct: 355 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 414
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M +GC P++ TYN L+++ C+ G +D A+++ N + G S +TY+T+I GL
Sbjct: 415 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 474
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAV 342
G+ + +K+L M ++G K I Y+S++ GL RE + DEA+++ +E L P A+
Sbjct: 475 GKTERAIKLLDEMR--RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 532
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ +LG C + A MI + P Y LI E +EA +L+ E+
Sbjct: 533 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 592
Query: 403 TGHGYLPIAST 413
G + +S
Sbjct: 593 CSRGLVKKSSA 603
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 10/226 (4%)
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
+R L G ++DG K L+ M G I P S++ G R + +A ++ +E+
Sbjct: 121 LRRLVRNGELEDGFKFLESM--VYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 178
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P + ++ I G+C G +++A + D+M P+VV Y+ ++ C ++++A
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQA 235
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
E++ P T+ ++ C++ VG A+KL++E MR +GS P Y+ L
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDE-MRN--KGSKPDVVTYNVL 292
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
I +C++G A L M G P+ +T N +L + W+
Sbjct: 293 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 338
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 218/424 (51%), Gaps = 32/424 (7%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
DGFK L M RG P+ + +LI C+ GK +A +M +E+ P+ +T+++LI
Sbjct: 75 DGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLI 134
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-- 212
YCK + NAL +L++ PDVVT +L LC G++ A+E+L+ ++
Sbjct: 135 SGYCKSGEIDNALQVLDR---MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECY 191
Query: 213 --------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ V + L EM KG P+V TYN+LI+ C+ G LD A+
Sbjct: 192 PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF 251
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
N+M G N +T++ ++R +CS GR D K+L M ++G + +N ++ L
Sbjct: 252 LNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDM--LRKGCSPSVVTFNILINFL 309
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R+ A++ L++M P ++ + + GFC + ++ A D M+ G P++
Sbjct: 310 CRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDI 369
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y+ L+ A C++ +V A E++ +++ G P+ T+NTV+ GL + G A+KL++E
Sbjct: 370 VTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDE 429
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICL 494
R +G P YS L+ L +G A + G GI P+ +T+NS++ +C
Sbjct: 430 MRR---KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCK 486
Query: 495 SQQT 498
S+QT
Sbjct: 487 SRQT 490
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 226/480 (47%), Gaps = 35/480 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD ++IRG R +++ + P + +N ++ K +ID A
Sbjct: 90 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +A V TY +++ LC + ++ ++L + P+ + Y LI + C
Sbjct: 150 LDRMNVAPDV----VTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 205
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K VG+A L+ +M +P+ VT+++LI CKE L A+ L S+G P+V+
Sbjct: 206 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L +CS GR MDA + L +M RKGC P+V T+NILI
Sbjct: 266 THNIILRSMCSTGRWMDAE-------------------KLLSDMLRKGCSPSVVTFNILI 306
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C G+L A+D+ M + G + N ++Y+ L+ G C ++D ++ L +M G
Sbjct: 307 NFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM--VSRG 364
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN++L L ++ + D A+E L Q+ P + + I G G E A
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 424
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D+M +G P+++ Y L+ +E +V EA + ++ G G P A T+N+++ GL
Sbjct: 425 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGL 484
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ A+ + I + P Y+ LI+ + +G + A LL ++ +G++
Sbjct: 485 CKSRQTDRAIDFLA---YMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 210/431 (48%), Gaps = 35/431 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G ++ I++ ++ D R N+ P + +N+IL L D +
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLD---RMNVAPDVVTYNTILRTLC----DSGKLKQ 177
Query: 69 RKKMMASGVQGDDY----TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+++ +Q + Y TY IL++ C + VG KLL M+++G KP+ V YN LI+
Sbjct: 178 AMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLIN 237
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+CK G++ A +++M +PN +T +I++ + C ++A LL G P
Sbjct: 238 GICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP 297
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
VVT ++ LC G + A++ILE+ G + K+ +L
Sbjct: 298 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 357
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M +GC P++ TYN L+++ C+ G +D A+++ N + G S +TY+T+I GL
Sbjct: 358 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 417
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAV 342
G+ + +K+L M ++G K I Y+S++ GL RE + DEA+++ +E L P A+
Sbjct: 418 GKTERAIKLLDEMR--RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 475
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ +LG C + A MI + P Y LI E +EA +L+ E+
Sbjct: 476 TYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 535
Query: 403 TGHGYLPIAST 413
G + +S
Sbjct: 536 CSRGLVKKSSA 546
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 10/226 (4%)
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
+R L G ++DG K L+ M G I P S++ G R + +A ++ +E+
Sbjct: 64 LRRLVRNGELEDGFKFLESM--VYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQS 121
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P + ++ I G+C G +++A + D+M P+VV Y+ ++ C ++++A
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQA 178
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
E++ P T+ ++ C++ VG A+KL++E MR +GS P Y+ L
Sbjct: 179 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDE-MRN--KGSKPDVVTYNVL 235
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
I +C++G A L M G P+ +T N +L + W+
Sbjct: 236 INGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 281
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 235/506 (46%), Gaps = 30/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P E+ ++ GL + I+D + V RF P+L ++N++++ L K D+D A
Sbjct: 328 PTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELL 387
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y M ++ + TY+IL+ C + R+ M G+ YN+LI+ C
Sbjct: 388 Y-SNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQC 446
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A SL +M EP TF+ LI YCK+ + A L K G P+V
Sbjct: 447 KFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVY 506
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T ++ LCS ++ +A E+ +E E+ R GK+ L++M
Sbjct: 507 TFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+KG +P+ TY LIS C TG + A D +D+ + N + Y L+ G C GR+
Sbjct: 567 HQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRL 626
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ L E + G + + ++ G ++ + + LK M + L P V +
Sbjct: 627 MEALS--ASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYT 684
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I + +G+ + A C+D M+ E PNVV Y L++ C+ + A L K M
Sbjct: 685 SMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAA 744
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P + T+ L L ++GN+ A+ L ++G+ L + ++ +I+ C+ G F
Sbjct: 745 NVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGL----LANTVTHNIIIRGFCKLGRF 800
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A+ +L +M GI PD +T+++L+
Sbjct: 801 HEATKVLSEMTENGIFPDCVTYSTLI 826
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 223/473 (47%), Gaps = 34/473 (7%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVL--VKEDIDLARAFYRKKMMASGVQGDDYTY 84
I D V L+ N+ P ++ +++L+ L V++ I + F + + +GV+ D YT
Sbjct: 171 IFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELF--DESVNAGVRPDPYTC 228
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMS 140
+ +++ +C + + M++ G + V YN LIH LCK +V A RSL
Sbjct: 229 SAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGG 288
Query: 141 DMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ VT+ L+ +C+ + + L+++ GF P ++ +++ L G++ D
Sbjct: 289 KGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDD 348
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A E++ + G R G +PN+ YN LI+S C+ G LD A +++
Sbjct: 349 AYELVVKVG-------------------RFGFVPNLFVYNALINSLCKGGDLDKAELLYS 389
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+M + + N +TY LI C GR+D + M ++G + YNS++ G +
Sbjct: 390 NMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRM--IQDGIGETVYAYNSLINGQCK 447
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
A +M + P A + I G+C D V+ A + +++MI+ G PNV
Sbjct: 448 FGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYT 507
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
+ LI C ++ EASEL E+ P T+N ++ G CR G + A +L+ EDM
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL-EDM 566
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G +P + Y PLI LC G A + + + + + + +++LL
Sbjct: 567 H--QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALL 617
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 213/505 (42%), Gaps = 73/505 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + +I R+ ++ + D + + + ++ +NS+++ K D+ A +
Sbjct: 398 PNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESL 457
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M GV+ T+ L+ G C +V FKL + M G+ PN + LI LC
Sbjct: 458 F-IEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLC 516
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ A L ++ E P +VT+++LI YC++ + A LLE G VPD
Sbjct: 517 STNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTY 576
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQ-------------------GRL---------- 214
T ++ LCS GRV A + +++ +Q GRL
Sbjct: 577 TYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEM 636
Query: 215 -----------------GKVKGGCR-----FLKEMERKGCLPNVDTYNILISSYCETGVL 252
G +K R LK+M +G P+ Y +I +Y + G
Sbjct: 637 IQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSF 696
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A + ++ M + N VTY L+ GLC G +D + + M+ + P N
Sbjct: 697 KKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAAN-------VPPN 749
Query: 313 SVLYG-----LYRENQQDEALEYLKQMEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
S+ YG L +E EA+ M K L V ++ I GFC G +A + +
Sbjct: 750 SITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTVTHNIIIRGFCKLGRFHEATKVLSE 809
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M E G P+ V Y LI+ YC+ V + +L M G P +N ++ G C G
Sbjct: 810 MTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGE 869
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGH 451
+ A +L ++ +R RG +P + +
Sbjct: 870 LDKAFELRDDMLR---RGIIPDNKY 891
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 202/485 (41%), Gaps = 70/485 (14%)
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+D LA F+ + + +YAI++ L + LLH + R P V
Sbjct: 81 DDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCVF 140
Query: 119 YNTL-IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+ L + CK + F++L+ Y + +A+V+++ F+
Sbjct: 141 SHFLDSYKRCKFSST---------------LGFNLLVQNYVLSSRIFDAVVIVKLMFANN 185
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-------GKVKGGCRF------- 223
+P+V T++ +L L V + + E+ +ES G V+ C
Sbjct: 186 LLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAK 245
Query: 224 --LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
++ ME G ++ TYN+LI C+ + A++V + G++ + VTY TL+ G
Sbjct: 246 EKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGF 305
Query: 282 CSGGRIDDGLKILQLM--------EDSKEG------SKGRISP----------------- 310
C + + G++++ M E + G +G+I
Sbjct: 306 CRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNL 365
Query: 311 --YNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN+++ L + D+A M L P + S+ I FC G ++ A FD+
Sbjct: 366 FVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDR 425
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MI++G V Y+ LI+ C+ + A L EMT G P A+TF +++SG C+
Sbjct: 426 MIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQ 485
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
V A KL + I G P ++ LI LC AS L ++V + I P +T
Sbjct: 486 VQKAFKLYN---KMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVT 542
Query: 487 WNSLL 491
+N L+
Sbjct: 543 YNVLI 547
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
FD+ + G P+ ++ + C+ + A E ++ M +G+ T+N ++ GLC+
Sbjct: 213 FDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCK 272
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
V A VE G+G Y L+ C F++ L+ +MV G P
Sbjct: 273 GDRVSEA---VEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPT 329
Query: 484 YLTWNSLLICLSQQ 497
+ L+ L +Q
Sbjct: 330 EAAVSGLVDGLRKQ 343
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 242/539 (44%), Gaps = 81/539 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR---FNMTPSLKIFNSILDVLVKE-DIDLA 64
PD F I GL + + DV +A + +R + P FN ++ K + + A
Sbjct: 530 PDTYAFNCCINGLSK---LGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQA 586
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A + ++M+A +Q D T+ L+ GLC +V +L +M + GV PN V YN L+H
Sbjct: 587 SALF-EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVH 645
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK+G++ A + +M P+ +T+ L+ A C+ +AL L+ + SFG+ P
Sbjct: 646 GLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDP 705
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D VT +++ L G+ A+ +LEE M KG P+V TYN
Sbjct: 706 DTVTYNILVDGLWKSGQTEQAITVLEE-------------------MVGKGHHPDVVTYN 746
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISW----NFVTYDTLIRGLCSGGRIDDGLKILQL 296
LI S C+ G L+ A + DM +S N VTY LI GLC GRID+ +++Q
Sbjct: 747 TLIDSLCKAGDLEEARRLHGDMS-SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQE 805
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFC 352
M I YNS L GL +++ EA E ++ + ++ P V S I G C
Sbjct: 806 MMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 865
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH---------------------------- 384
G ++A FD MI G VPNVV Y+ L++
Sbjct: 866 KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925
Query: 385 -------AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
A+C+ V EA EL+ M G P TFN+++ GLC+ G A ++ +D
Sbjct: 926 TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMF-DD 984
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
M + G P Y LI L G A +LL M PD +N + LS+
Sbjct: 985 MT-LKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSK 1038
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 237/526 (45%), Gaps = 69/526 (13%)
Query: 49 FNSILDVLVKEDIDLARAF--YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
+N +L L + + ARA +R +M GV TY ++ GLC +N +G G +L
Sbjct: 183 YNIVLQSLCRAG-ETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEE 241
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEEN 162
+ RG P+ V YNTLI SLCK G + AR L DM PN VT+S+LI CK
Sbjct: 242 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGR 301
Query: 163 LVNALVLLEKSF--SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL------ 214
+ A L+++ S +P+++T L+ LC +A E++ S G L
Sbjct: 302 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDT 360
Query: 215 -------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
G++ C +M G +PNV TYN L++ C+ ++ A +
Sbjct: 361 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 420
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G++ + +TY L+ C R+D+ L++L M + G + +NS++ GL +
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM--ASRGCTPNVVTFNSIIDGLCKS 478
Query: 322 NQQDEALEYLKQM-----------------------------EKLFPRAVDRSLKILGFC 352
++ EA + M E L D C
Sbjct: 479 DRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCC 538
Query: 353 VD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
++ G+V A + +++M+E VP+ V ++ LI C+ +AS L +EM
Sbjct: 539 INGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 598
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P TF ++ GLC+ G V A ++ D+ G G P Y+ L+ LC+ G +
Sbjct: 599 QPDVMTFGALIDGLCKAGQVEAARDIL--DLMG-NLGVPPNVVTYNALVHGLCKSGRIEE 655
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQT-TWLLLLLLNEMVSF 512
A L +MV G +PD +T+ SL+ L + + T L L++E+ SF
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 701
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 254/536 (47%), Gaps = 66/536 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +I GL +A + DL+ + P++ +N+++ L K +
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M++SG D TY L+ LC +R D +L+ +KS G P++V YN L+ L K
Sbjct: 660 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVL---LEKSFSFGFVPD 181
+G+ +A +++ +M P+ VT++ LI + CK +L A L + S VP+
Sbjct: 720 SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPN 779
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC--LPNVDTY 239
VVT + ++ LC VGR+ +A E+++E M RK C LPN+ TY
Sbjct: 780 VVTYSVLINGLCKVGRIDEARELIQE-------------------MMRKSCDVLPNIITY 820
Query: 240 NILISSYCETGVLDSALDVFNDMKIDG---ISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
N + C+ ++ A ++ ++ DG +S + VT+ TLI GLC G+ D+ +
Sbjct: 821 NSFLDGLCKQSMMAEACELMRSLR-DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M G + YN ++ GL + ++ + A ++ M + + P + S+ + FC
Sbjct: 880 M--IAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT-GHGYLPIAST 413
+V++A M G PNVV ++ +I C+ ++ EA ++ +MT HG P T
Sbjct: 938 SHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKIT 997
Query: 414 FNTVLSGLCRQGNVGTALKLVE--------------EDMRGIGRGS-----------LPG 448
+ T++ GL R G G A L++ + +G S +P
Sbjct: 998 YCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPD 1057
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ--TTW 500
++ LI C+ G F+ AS L +MV K + PD +T+ +L+ +C + Q TW
Sbjct: 1058 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATW 1113
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 147/546 (26%), Positives = 249/546 (45%), Gaps = 73/546 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + T+I GL ++ + ++ + + P + +N+++D L K D++ AR
Sbjct: 214 PTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 273
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNTLIHS 125
+ M + + TY++L+ GLC R+ + +L+ M KS V PN + YN+ +
Sbjct: 274 H-GDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 332
Query: 126 LCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCK A LM + + P+ VTFS LI CK + A + + + G+V
Sbjct: 333 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 392
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+V+T ++ LC ++ A ++E ++G + +V
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-GISWNFVTYDTLIRGLC 282
L M +GC PNV T+N +I C++ A +F+DM + G+ + +TY TLI GL
Sbjct: 453 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLF 512
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQME-KLFPR 340
GR +L M D + +N + GL + AL+ Y + +E +L P
Sbjct: 513 RTGRAGQAEALLDAMPDPDTYA------FNCCINGLSKLGDVSRALQVYNRMLELELVPD 566
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEE------------------------------ 370
V ++ I G C GN E A F++M+ +
Sbjct: 567 KVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILD 626
Query: 371 -----GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
G PNVV Y+ L+H C+ R+ EA + ++EM G +P + T+ +++ LCR
Sbjct: 627 LMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRAS 686
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
AL+LV E ++ G P + Y+ L+ L + G + A +L +MVGKG PD +
Sbjct: 687 RTDDALQLVSE-LKSFGWD--PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVV 743
Query: 486 TWNSLL 491
T+N+L+
Sbjct: 744 TYNTLI 749
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 200/445 (44%), Gaps = 39/445 (8%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR---GVKPNS 116
+ +L FY A+ + G +T K L L + G K + + +SR +PN
Sbjct: 90 NAELGTQFYD---WAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNH 146
Query: 117 VIYNTLIHSLCK-NGKVGRARSLMSDMEEPND--VTFSILICAYCKEENLVNALVLLEKS 173
Y+TL+ + K G V R + + ++I++ + C+ AL +
Sbjct: 147 FTYSTLLRATYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGE 206
Query: 174 FSF-GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
+ G P +VT ++ LC + +E+ EE E+G
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHH------------------ 248
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+V TYN LI S C+ G L+ A + DM N VTY LI GLC GRID+ +
Sbjct: 249 -PDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARE 307
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME----KLFPRAVDRSLKI 348
++Q M I YNS L GL +++ EA E ++ + ++ P V S I
Sbjct: 308 LIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLI 367
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +++A FD MI G VPNV+ Y+ L++ C+ +++ A +++ M G
Sbjct: 368 DGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVT 427
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQS 467
P T++ ++ C+ V AL+L + G+ RG P ++ +I LC+
Sbjct: 428 PDVITYSVLVDAFCKASRVDEALEL----LHGMASRGCTPNVVTFNSIIDGLCKSDRSGE 483
Query: 468 ASMLLVQMVGK-GILPDYLTWNSLL 491
A + M K G++PD +T+ +L+
Sbjct: 484 AFQMFDDMALKHGLVPDKITYCTLI 508
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 190/421 (45%), Gaps = 39/421 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + ++ GL ++ + + + P + +N+++D L K D++ AR
Sbjct: 705 PDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764
Query: 68 YRKKMMASGVQ----GDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNT 121
+ M+S V + TY++L+ GLC R+ + +L+ M KS V PN + YN+
Sbjct: 765 HGD--MSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNS 822
Query: 122 LIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+ LCK + A LM + + P+ VTFS LI CK A + + +
Sbjct: 823 FLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIA 882
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
G+VP+VVT ++ LC ++ A ++E ++G + V
Sbjct: 883 GGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDE 942
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-GISWNFVTYDTLI 278
L M +GC PNV T+N +I C++ A +F+DM + G++ + +TY TLI
Sbjct: 943 ALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI 1002
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
GL G +L M D + +N + GL + AL + ++E L
Sbjct: 1003 DGLFRTGWAGQAEVLLDAMPDPDTYA------FNCCINGLSKLGDVSRALHRMLELE-LV 1055
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V ++ I G C GN E A F++M+ + P+V+ + LI C+ +V ++
Sbjct: 1056 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115
Query: 399 M 399
M
Sbjct: 1116 M 1116
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 113/264 (42%), Gaps = 42/264 (15%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC-SGGRIDDGLKILQL 296
++N ++ ++G A+D+F N TY TL+R +GG ++ L +
Sbjct: 113 SFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRR 172
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGN 356
+ S ++ YN VL L R + ALE +
Sbjct: 173 IRSSSR----SVADYNIVLQSLCRAGETARALEIFRG----------------------- 205
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+M +G P +V Y+ +I+ C+ + EL +E+ G+ P T+NT
Sbjct: 206 ---------EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNT 256
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ LC+ G++ A +L DM R +P YS LI LC+ G A L+ +M
Sbjct: 257 LIDSLCKAGDLEEARRL-HGDMSS--RSCVPNVVTYSVLINGLCKVGRIDEARELIQEMT 313
Query: 477 GKG--ILPDYLTWNSLLICLSQQT 498
K +LP+ +T+NS L L +Q+
Sbjct: 314 RKSCDVLPNIITYNSFLDGLCKQS 337
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/458 (28%), Positives = 235/458 (51%), Gaps = 36/458 (7%)
Query: 76 GVQG----DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
GV G +++ I ++ L + +G K L M +G P+ + +LI C++GK
Sbjct: 97 GVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGK 156
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+A +M +E P+ +T+++LI YCK + AL +LE+ PDVVT
Sbjct: 157 TKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLER---MSVAPDVVTYNT 213
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMERKG 231
+L LC G++ +A+E+L+ ++ V + C + L EM +KG
Sbjct: 214 ILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 273
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C P+V TYN+LI+ C+ G LD A+ N+M G N +T++ ++R +CS GR D
Sbjct: 274 CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAE 333
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++L M ++G + +N ++ L R+ A++ L++M K P ++ + +
Sbjct: 334 RLLSDM--LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC + ++ A + M+ G P++V Y+ L+ A C++ +V A E++ +++ G P
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
+ T+NTV+ GL + G A++L+EE R +G P YS L++ L +G A
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRR---KGLKPDIITYSTLLRGLGREGKVDEAI 508
Query: 470 MLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
+ M G I P +T+N+++ +C +QQT+ + L
Sbjct: 509 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 546
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 214/460 (46%), Gaps = 35/460 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD ++IRG R+ + +++ P + +N ++ K +ID A
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV 198
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +A D TY +++ LC + ++ + ++L R P+ + Y LI + C
Sbjct: 199 LERMSVAP----DVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATC 254
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ VG+A L+ +M + P+ VT+++LI CKE L A+ L S+G P+V+
Sbjct: 255 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVI 314
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L +CS GR MDA R L +M RKGC P+V T+NILI
Sbjct: 315 THNIILRSMCSTGRWMDAE-------------------RLLSDMLRKGCSPSVVTFNILI 355
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C +L A+DV M G N ++Y+ L+ G C ++D ++ L++M G
Sbjct: 356 NFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM--VSRG 413
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN++L L ++ + D A+E L Q+ P + + I G G E A
Sbjct: 414 CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAV 473
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++M +G P+++ Y L+ +E +V EA ++ +M G P A T+N ++ GL
Sbjct: 474 ELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 533
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
C+ A+ + + +G P Y+ LI+ + +
Sbjct: 534 CKAQQTSRAIDFL---AYMVEKGCKPTEATYTILIEGIAD 570
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 149/519 (28%), Positives = 239/519 (46%), Gaps = 61/519 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E +F+ VI RA + +K + F PS+KI+N +LD L+ E+ + Y
Sbjct: 107 NEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIY 166
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G++ + YTY +L+K LC +RV KLL M +G P++V Y T++ S+C+
Sbjct: 167 N-NMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCR 225
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GKV AR L ++ V ++ LI +C+E + L + G PDV+T + V
Sbjct: 226 LGKVEEARELSMRIKSFVPV-YNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTV 284
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ L +G V A+ + L +M +GC PNV T+ L+ Y
Sbjct: 285 INTLSEMGNVEMALAV-------------------LAKMFLRGCSPNVHTFTSLMKGYFM 325
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-------- 300
G L ALD++N M +G N V Y+TLI GLCS G++ + + + Q ME +
Sbjct: 326 GGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETT 385
Query: 301 -------------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
G + Y ++ L R + + AL ++ M
Sbjct: 386 YSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMA 445
Query: 336 --KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
P + + I G C G E A + +QM + G PNV Y+ ++ +R R
Sbjct: 446 NGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTR 505
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
EA +++ E+ T+NT+LSG C G AL++ + + G G+ P S Y+
Sbjct: 506 EALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVG---GTKPDSITYN 562
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGI-LPDYLTWNSLL 491
+I A C++G ++A L+ ++ KG PD T+ SLL
Sbjct: 563 TVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLL 601
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/490 (25%), Positives = 222/490 (45%), Gaps = 54/490 (11%)
Query: 58 KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+ DID + + M G+ ++ + I++ K + + G KP+
Sbjct: 86 ERDID-GIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVK 144
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKS 173
IYN ++ +L K + ++M+ E N T+++L+ A CK + + A LL +
Sbjct: 145 IYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEM 204
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILE--ESGEQGRLGKVKGGCR--------- 222
G +PD V+ T V+ +C +G+V +A E+ +S + G CR
Sbjct: 205 SYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFE 264
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
EM +G P+V TY+ +I++ E G ++ AL V M + G S N T+ +L++G
Sbjct: 265 LFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYF 324
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GGR+ + L + M +EGS+ YN++++GL + EA+ ++ME+ +FP
Sbjct: 325 MGGRLCEALDLWNRM--IQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPN 382
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
S I GF G++ A +++MI G +PNVV+Y C++ C+ A L++
Sbjct: 383 ETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIE 442
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG------------------ 442
M P TFNT + GLC G A+K++ + MR G
Sbjct: 443 NMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQ-MRQYGCAPNVTTYNEVLDGLFNA 501
Query: 443 ---RGSLPGSGH------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
R +L G Y+ ++ C G F+ A + +++ G PD +T+
Sbjct: 502 KRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITY 561
Query: 488 NSLLICLSQQ 497
N+++ +Q
Sbjct: 562 NTVIYAYCKQ 571
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 199/417 (47%), Gaps = 30/417 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKK 71
++ +I G R + +V + + ++ + P + ++++++ L + ++++A A K
Sbjct: 245 VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVL-AK 303
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + +T+ LMKG + R+ + L + M G +PN+V YNTLIH LC GK
Sbjct: 304 MFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGK 363
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A S+ ME PN+ T+S LI + K +LV A + K + G +P+VV T
Sbjct: 364 MVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTC 423
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++++LC A+ ++E M C PN T+N I C
Sbjct: 424 MVDVLCRNSMFNHALHLIE-------------------NMANGNCPPNTITFNTFIKGLC 464
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+G + A+ V N M+ G + N TY+ ++ GL + R + L+I+ +E+ + K
Sbjct: 465 CSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEME--IKSN 522
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN++L G AL+ ++ P ++ + I +C G V+ A + D
Sbjct: 523 LVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVD 582
Query: 366 QMIEEG-GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++ ++G G P+V Y L+ C V EA + +M G P +T+N ++ GL
Sbjct: 583 RLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 140/328 (42%), Gaps = 51/328 (15%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S P+ + T+I GL + + V + + R + P+ +++++D K + +
Sbjct: 344 SEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGAS 403
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
KM+ +G + Y ++ LC + L+ M + PN++ +NT I L
Sbjct: 404 EIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGL 463
Query: 127 CKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
C +GK A +++ M + +G P+V T
Sbjct: 464 CCSGKTEWAMKVLNQMRQ-------------------------------YGCAPNVTTYN 492
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+VL+ L + R +A++I+ E ++EME K N+ TYN ++S +
Sbjct: 493 EVLDGLFNAKRTREALQIVGE----------------IEEMEIKS---NLVTYNTILSGF 533
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G+ AL + + + G + +TY+T+I C G + ++++ + EG
Sbjct: 534 CHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPD 593
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM 334
+ Y S+L+G+ DEA+ +L +M
Sbjct: 594 -VFTYTSLLWGVCNWIGVDEAVVHLDKM 620
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 30/283 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLAR 65
P+E+ + T+I G +A D+V A+++ ++ P++ ++ ++DVL + +
Sbjct: 381 PNETTYSTLIDGFAKA---GDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSM-FNH 436
Query: 66 AFYRKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A + + MA+G + T+ +KGLC + + K+L+ M+ G PN YN ++
Sbjct: 437 ALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLD 496
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L + A ++ ++EE N VT++ ++ +C AL + K G P
Sbjct: 497 GLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKP 556
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D +T V+ C G V A+++++ RL K G P+V TY
Sbjct: 557 DSITYNTVIYAYCKQGEVKTAIQLVD------RLTKKGEG------------YPDVFTYT 598
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+ C +D A+ + M +GI N T++ L+RGL S
Sbjct: 599 SLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFS 641
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 218/442 (49%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + P L + ++++ L K DIDLA +
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 243
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KKM ++ + Y ++ GLC + D F L + M+++G+KP+ YN+LI LC
Sbjct: 244 L-KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE L+ A L ++ P++V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 362
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C R+ +A +I M K CLP+V TYN LI
Sbjct: 363 TYNSLINGFCMHDRLDEAQQIF-------------------TLMVSKDCLPDVVTYNTLI 403
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ ++ +++F +M G+ N VTY+TLI+GL G D KI + M +G
Sbjct: 404 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM--VSDG 461
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I Y+ +L GL + + ++AL EYL Q K+ P ++ I G C G VED
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPNIYTYNIMIEGMCKAGKVEDG 520
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G PNV+IY +I +C++ EA L +EM G LP + +NT++
Sbjct: 521 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 580
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 581 RLRDGDKAASAELIKE-MRSCG 601
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 215/438 (49%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M +RG +P+ Y T+++ LCK G
Sbjct: 176 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 235
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A SL+ ME E N V ++ +I CK +++ +A L K + G PDV T
Sbjct: 236 DIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 295
Query: 187 KVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
PN+ TYN LI+ +C LD A +F M + VTY+TLI+G C R+++G
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G YN+++ GL++ D A + K+M + + P + S+ +
Sbjct: 416 MELFREM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +E A F+ + + PN+ Y+ +I C+ +V + +L ++ G
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P + T++SG CR+G A L E G+LP SG Y+ LI+A G ++
Sbjct: 534 PNVIIYTTMISGFCRKGLKEEADALFREMKED---GTLPDSGCYNTLIRARLRDGDKAAS 590
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G + D T
Sbjct: 591 AELIKEMRSCGFVGDAST 608
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 220/461 (47%), Gaps = 44/461 (9%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ F+ +L + K + ++M G+ + YTY+IL+ C +++ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L M G +P+ V ++L++ C ++ A +L+ M E P+ VTF+ LI
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
A+ L+++ + G PD+ T V+ LC G + A+ +L
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL-------------- 244
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
K+ME+ NV YN +I C+ +D A D+FN M+ GI + TY++LI
Sbjct: 245 -----KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
LC+ GR D ++L M + K + +NS++ +E + EA EKLF
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPN--VVTFNSLIDAFAKEGKLIEA-------EKLFD 350
Query: 340 RAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+ RS+ I GFC+ +++A++ F M+ + +P+VV Y+ LI +C+ +
Sbjct: 351 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAK 410
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
RV E EL +EM+ G + T+NT++ GL + G+ A K+ + + + G P
Sbjct: 411 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSDGVPPDII 467
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC+ G + A ++ + + P+ T+N ++
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMI 508
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 198/437 (45%), Gaps = 35/437 (8%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL-HVMKSRGVKPNSVIYNTLIHS 125
F+R+ SG DY + GL ++ D L ++KSR P+ + ++ L+ +
Sbjct: 35 FWRRAF--SGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPF-PSIIEFSKLLSA 90
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+ K K SL M+ N T+SIL+ +C+ L AL +L K G+ PD
Sbjct: 91 IAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPD 150
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+VT++ +L C R+ +AV ++++ M G P+ T+N
Sbjct: 151 IVTLSSLLNGYCHGKRISEAVALVDQ-------------------MVEMGYKPDTVTFNT 191
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI A+ + + M G + TY T++ GLC G ID L +L+ ME K
Sbjct: 192 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 251
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
+ + YN+++ GL + D+A + +ME + P + I C G D
Sbjct: 252 --IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSD 309
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A R MIE PNVV ++ LI A+ +E ++ EA +L EM P T+N++++
Sbjct: 310 ASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 369
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
G C + A ++ + + LP Y+ LIK C+ + L +M +G
Sbjct: 370 GFCMHDRLDEAQQIFT---LMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 426
Query: 480 ILPDYLTWNSLLICLSQ 496
++ + +T+N+L+ L Q
Sbjct: 427 LVGNTVTYNTLIQGLFQ 443
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 42/287 (14%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K+ EM + P++ ++ L+S+ + D + + M+ GI N TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
L+ C R +Q AL L +M
Sbjct: 121 ILLNCFC-------------------------------------RRSQLPLALAVLGKMM 143
Query: 336 KL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
KL P V S + G+C + +A DQM+E G P+ V ++ LIH +
Sbjct: 144 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKAS 203
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
EA L+ M G P T+ TV++GLC++G++ AL L+++ +G ++ Y+
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVV---IYN 260
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+I LC+ A L +M KGI PD T+NSL+ CL W
Sbjct: 261 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 22/297 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ F ++I + + + K D + + ++ P++ +NS+++ D +D A+
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 383
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M++ D TY L+KG C RV +G +L M RG+ N+V YNTLI L
Sbjct: 384 F-TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 442
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD P+ +T+SIL+ CK L ALV+ E P++
Sbjct: 443 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY 502
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D ++ +G V G CR +EM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 562
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ G LP+ YN LI + G ++ ++ +M+ G + T +I L G
Sbjct: 563 KEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 619
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 39/189 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + ++ GL + + + + + + M P++
Sbjct: 463 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY-------------------- 502
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
TY I+++G+C +V DG+ L + +GVKPN +IY T+I C
Sbjct: 503 ---------------TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFC 547
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A +L +M+E P+ ++ LI A ++ + + L+++ S GFV D
Sbjct: 548 RKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAS 607
Query: 184 TITKVLELL 192
TI+ V+ +L
Sbjct: 608 TISMVINML 616
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 157/569 (27%), Positives = 243/569 (42%), Gaps = 126/569 (22%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
E +FI VI R + +K + F P++KI+N +LD ++ E+ + Y
Sbjct: 113 SEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIY 172
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G + + YTY IL+K LC NRV KLL M ++G +P+ V Y T+I S+ K
Sbjct: 173 -SNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSK 231
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GKV AR L S +PN ++ LI +C+E + +LL + G P+V+T + V
Sbjct: 232 LGKVEEAREL-SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTV 290
Query: 189 LELLCSVG-----------------------------------RVMDAVEILEESGEQG- 212
+ L +G RV++A+ I E+G
Sbjct: 291 ISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGF 350
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
GK+ +MER GC PNV TY LI + + G L A +
Sbjct: 351 EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASE 410
Query: 258 VFNDMKIDGI----------------------SW-------------NFVTYDTLIRGLC 282
++N M +G +W N VT++T I+GLC
Sbjct: 411 IWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLC 470
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
GR++ + + ME + G I YN VL GL +EN+ EALE + +ME
Sbjct: 471 CSGRVECAINLFCQME--QYGCSPNIKTYNEVLDGLLKENRIKEALELVTEME------- 521
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
E+G N+V Y+ + +C + EA +L+ +M
Sbjct: 522 --------------------------EKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKM 555
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P A T+NT+ C QG V TA++L+ D G +P Y+ L+ +C +
Sbjct: 556 LVGGVKPDAITYNTLTYAYCMQGKVKTAIQLL--DKLSAGGKWVPEVAAYTSLLWGICNQ 613
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + A + L +M+ +GI + TWN+L+
Sbjct: 614 IGVEEAVLYLDKMLNEGICLNAATWNALV 642
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 230/501 (45%), Gaps = 58/501 (11%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL----------- 91
TP +K + ++ + + DI LA ++R + Q TY I+++ L
Sbjct: 42 TP-IKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQY 100
Query: 92 -----------CLTN----------RVG---DGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
C + RVG K+ + ++ G +P IYN L+ ++
Sbjct: 101 LLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAML 160
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ + S+M +EPN T++IL+ A CK + A LL + + G PDVV
Sbjct: 161 SENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVV 220
Query: 184 TITKVLELLCSVGRVMDAVE--ILEESGEQGRLGKVKGGCR---------FLKEMERKGC 232
+ T V+ + +G+V +A E I + + G CR L +M KG
Sbjct: 221 SYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGI 280
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV TY+ +ISS G ++ AL V+ M + G S N T+ +L++G GR+ + L
Sbjct: 281 DPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALN 340
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
I M ++EG + + YN++++GL + EA+ +ME+ P I G
Sbjct: 341 IWNRM--AEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDG 398
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F G++ A +++M+ G +PNVV+Y +++ C+ +A L+++M+ P
Sbjct: 399 FAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPN 458
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
TFNT + GLC G V A+ L + + G P Y+ ++ L ++ + A
Sbjct: 459 TVTFNTFIKGLCCSGRVECAINLFCQMEQ---YGCSPNIKTYNEVLDGLLKENRIKEALE 515
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
L+ +M KG+ + +T+N++
Sbjct: 516 LVTEMEEKGMELNLVTYNTIF 536
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 45/259 (17%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY I+I +D + MK++GIS + D I + + R+ + L++
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMKLEGIS---CSEDLFINVINTYRRVGLAEQALKMF 137
Query: 298 EDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGN 356
+E G + + YN +L + EN+ + +E ++
Sbjct: 138 YRIREFGCQPTVKIYNHLLDAMLSENR-------FQMIEPIY------------------ 172
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
M +G PNV Y+ L+ A C+ RV A +L+ EM+ G P ++ T
Sbjct: 173 --------SNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTT 224
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V+S + + G V E+ R + P Y+ LI C + + +LL QMV
Sbjct: 225 VISSMSKLGKV--------EEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMV 276
Query: 477 GKGILPDYLTWNSLLICLS 495
KGI P+ +T+++++ LS
Sbjct: 277 EKGIDPNVITYSTVISSLS 295
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+V+ + QM EG + ++ +I+ Y + +A ++ + G P +N
Sbjct: 94 DVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYN 153
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+L + + +++E + R G P Y+ L+KALC+ A LLV+
Sbjct: 154 HLLDAMLSENR----FQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVE 209
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M KG PD +++ +++ +S+
Sbjct: 210 MSNKGCEPDVVSYTTVISSMSK 231
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 46/455 (10%)
Query: 31 VKATDLVSRFN------MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
+KA D V F P++ FN + + K + +L A K+M + G+ YT
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC-KQMESKGIAHSIYT 125
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+I++ C ++ F + + G +P++VI+NTL++ LC +V A L+ M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P +T + L+ C + +A+VL+++ GF P+ VT VL ++C G+
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A+E+L ++ME + + Y+I+I C+ G LD+A ++F
Sbjct: 246 LAMELL-------------------RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVL 315
N+M+I G + +TY+TLI G C+ GR DDG K+L+ M K +ISP ++ ++
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM------IKRKISPNVVTFSVLI 340
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + EA + LK+M + + P + + I GFC + +E+A + D MI +G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+++ ++ LI+ YC+ R+ + EL +EM+ G + T+NT++ G C+ G + A KL
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+E + R P Y L+ LC+ G + A
Sbjct: 461 FQE---MVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 211/429 (49%), Gaps = 31/429 (7%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMA 74
T++ GL ++D V D + P+ + +L+V+ K LA RK M
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK-MEE 256
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
++ D Y+I++ GLC + + F L + M+ +G K + + YNTLI C G+
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
L+ DM + PN VTFS+LI ++ KE L A LL++ G P+ +T +++
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
C R+ +A+++++ M KGC P++ T+NILI+ YC+
Sbjct: 377 GFCKENRLEEAIQMVDL-------------------MISKGCDPDIMTFNILINGYCKAN 417
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+D L++F +M + G+ N VTY+TL++G C G+++ K+ Q M + + I
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR--VRPDIVS 475
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL---GFCVDGNVEDAKRCFDQM 367
Y +L GL + ++ALE ++EK +D + ++ G C V+DA F +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEK-SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+G + Y+ +I C+++ + +A L ++MT G+ P T+N ++ +
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 428 GTALKLVEE 436
TA +L+EE
Sbjct: 595 TTAAELIEE 603
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 25/294 (8%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
S+ I G+ R + ++K +++ R + P+ +NS++D KE+ L A
Sbjct: 337 SVLIDSFVKEGKLREADQLLK--EMMQR-GIAPNTITYNSLIDGFCKEN-RLEEAIQMVD 392
Query: 72 MMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M S G D T+ IL+ G C NR+ DG +L M RGV N+V YNTL+ C++G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+ A+ L +M P+ V++ IL+ C L AL + K D+
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ +C+ +V DA ++ +G R + ++M +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
G P+ TYNILI ++ +A ++ +MK G + T +I L SG
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 226/435 (51%), Gaps = 32/435 (7%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--- 144
++ + T + +GFK L M G P+ + TLI C+ GK +A ++ +E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ +T++++I YCK + NAL +L++ PDVVT +L LC G++ A+E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L+ ++ R V + L EM +GC P+V TYN+L++ C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G LD A+ NDM G N +T++ ++R +CS GR D K+L M ++G
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM--LRKGFSPS 343
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ +N ++ L R+ A++ L++M + P ++ + + GFC + ++ A +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+ G P++V Y+ ++ A C++ +V +A E++ +++ G P+ T+NTV+ GL + G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
G A+KL++E MR + P + YS L+ L +G A + GI P+ +
Sbjct: 464 KTGKAIKLLDE-MR--AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 486 TWNSLL--ICLSQQT 498
T+NS++ +C S+QT
Sbjct: 521 TFNSIMLGLCKSRQT 535
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 210/446 (47%), Gaps = 62/446 (13%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
SG D TY +++ G C + + +L M V P+ V YNT++ SLC +GK+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A ++ M + P+ +T++ILI A C++ + +A+ LL++ G PDVVT ++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+C GR+ +A+ +FL +M GC PNV T+NI++ S C T
Sbjct: 282 NGICKEGRLDEAI-------------------KFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G A + DM G S + VT++ LI LC G + + IL+ M + G +
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM--PQHGCQPNSL 380
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN +L+G +E + D A+EYL++M +P V + + C DG VEDA +Q+
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+G P ++ Y+ +I + + +A +L+ EM P T+++++ GL R+G V
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 428 GTALKLVEEDMRG--------------------------------IGRGSLPGSGHYSPL 455
A+K E R I RG P Y+ L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 456 IKALCEKGGFQSASMLLVQMVGKGIL 481
I+ L +G + A LL ++ KG++
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLM 586
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 207/427 (48%), Gaps = 27/427 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G +A IN+ + D R +++P + +N+IL L
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ D TY IL++ C + VG KLL M+ RG P+ V YN L++ +CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A ++DM +PN +T +I++ + C ++A LL GF P VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G + A++ILE+ + G + K+ +L+ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+GC P++ TYN ++++ C+ G ++ A+++ N + G S +TY+T+I GL G+
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSL 346
+K+L M +K+ I+ Y+S++ GL RE + DEA+++ + E++ P AV +
Sbjct: 467 KAIKLLDEMR-AKDLKPDTIT-YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+LG C + A MI G PN Y LI E +EA EL+ E+ G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 407 YLPIAST 413
+ +S
Sbjct: 585 LMKKSSA 591
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 233/485 (48%), Gaps = 30/485 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
+F +IR + +D + D++ + P ++ FN++L + +K + +M
Sbjct: 168 VFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM 227
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
++ YT+ I++ LC ++ + M++ GVKPN V YNT+IH C G+V
Sbjct: 228 FRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
AR ++ M+ EP+ T+ LI CK L A +LEK G +P VT +
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ C+ G ++ A G R EM R+ LP V TYN+LI +
Sbjct: 348 IDGYCNKGDLVKAF-----------------GYR--DEMVRRAILPTVSTYNLLIHALFL 388
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G +D A + DM GI + +TY+ LI G C G + M +G + +
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM--ISKGIQPTL 446
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y S++Y L + N+ A + +++ E P + + I G C +GN++ A +
Sbjct: 447 VTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKE 506
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M + VP+ V Y+ L+ C+E +V EA EL+KEM G P ++NT++SG ++G+
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ A + +E M IG P Y+ LI+ LC+ A LL +MV KGI PD T
Sbjct: 567 INDAFTIRDE-MLSIGFN--PTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDST 623
Query: 487 WNSLL 491
+ SL+
Sbjct: 624 YFSLI 628
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 201/410 (49%), Gaps = 34/410 (8%)
Query: 39 RFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV 97
R + ++ FN +++VL KE + A+ F M GV+ + TY ++ G C RV
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFI-GSMENLGVKPNVVTYNTVIHGYCSRGRV 287
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
+L +MK+RGV+P+S Y +LI +CK GK+ A ++ M+E P VT++ L
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
I YC + +LV A ++ +P V T ++ L G++ +A ++++ G+ G
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGI 407
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
R G K EM KG P + TY LI + + +A D
Sbjct: 408 VPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADD 467
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNS 313
+F + +G S + + ++ LI G C+ G +D +L KE K I P YN+
Sbjct: 468 LFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALL------KEMDKRNIVPDEVTYNT 521
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G RE + +EA E LK+M++ + P + + I G+ G++ DA D+M+ G
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
P ++ Y+ LI C+ ++ A EL+KEM G P ST+ +++ G+
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 201/441 (45%), Gaps = 63/441 (14%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
V D F L + + R +S++++ LI + C+ + A M+E P TF+
Sbjct: 147 VKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNA 206
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
++ + K VL + F V T ++ +LC ++G
Sbjct: 207 MLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLC----------------KEG 250
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+L K K F+ ME G PNV TYN +I YC G ++ A V + MK G+ +
Sbjct: 251 KLKKAKD---FIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSY 307
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMED--------------------------------- 299
TY +LI G+C GG++++ IL+ M++
Sbjct: 308 TYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEM 367
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ +S YN +++ L+ E + DEA +K M + P ++ ++ I G+C GN
Sbjct: 368 VRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNA 427
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A D+MI +G P +V Y LI+ + R++ A +L +++ G P FN +
Sbjct: 428 KKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNAL 487
Query: 418 LSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ G C GN+ A L++E D R I +P Y+ L++ C +G + A LL +M
Sbjct: 488 IDGHCANGNLDRAFALLKEMDKRNI----VPDEVTYNTLMQGRCREGKVEEARELLKEMK 543
Query: 477 GKGILPDYLTWNSLLICLSQQ 497
+GI PD++++N+L+ S++
Sbjct: 544 RRGIRPDHISYNTLISGYSKR 564
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 23/239 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R D + + P+L + S++ VL K + A
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDL 468
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K++ G D + L+ G C + F LL M R + P+ V YNTL+ C+
Sbjct: 469 FEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCR 528
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV AR L+ +M+ P+ ++++ LI Y K ++ +A + ++ S GF P ++T
Sbjct: 529 EGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+++ LC +QG L + LKEM KG P+ TY LI
Sbjct: 589 YNALIQGLC--------------KNQQGDLAE-----ELLKEMVSKGITPDDSTYFSLI 628
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PDE + T+++G R + + + + R + P +N+++ K D+ AF
Sbjct: 514 PDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRG-DINDAFT 572
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGD-GFKLLHVMKSRGVKPNSVIYNTLIHSL 126
R +M++ G TY L++GLC N+ GD +LL M S+G+ P+ Y +LI +
Sbjct: 573 IRDEMLSIGFNPTLLTYNALIQGLC-KNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631
Query: 127 CK 128
K
Sbjct: 632 GK 633
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 237/521 (45%), Gaps = 65/521 (12%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR--KKMMASGVQGDDYTYAILMKGLCL 93
L R + PSL+ N++L L + +A + ++A + + YT+ +L+ C
Sbjct: 157 LRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCS 216
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ D L M+ G+ P++V YNTL+++ C+ G +G AR+L++ M++ P T
Sbjct: 217 KGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPT 276
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ L+ AY + + A ++E + GF PD+ T + LC G+V +A + +E
Sbjct: 277 YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEME 336
Query: 210 EQGRL-------GKVKGGC----------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
G L + C R L+EM KG + T+NI+I C+ G L
Sbjct: 337 RLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGEL 396
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ AL N M DG++ + +TY+TLI C G I ++ M + G K N
Sbjct: 397 EGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM--VRRGLKLDTFTLN 454
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI-- 368
+VLY L +E + +EA L+ + P V + + + N E A R +D+MI
Sbjct: 455 TVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEK 514
Query: 369 ---------------------------------EEGGVPNVVIYDCLIHAYCQEERVREA 395
E+G VP+ Y+ +IHAYC+E + A
Sbjct: 515 KLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENA 574
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+ +M + + P T NT+++GLC G + ALKL E + +G Y+ L
Sbjct: 575 FQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFES---WVEKGKKVDVITYNTL 631
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I+ +C+ G +A M +G+ PD T+N +L LS+
Sbjct: 632 IQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 672
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 192/408 (47%), Gaps = 40/408 (9%)
Query: 102 KLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRA------RSLMSDMEEPNDVTFSILI 154
+LLH ++ R V+P+ N ++ +L ++ RS+++ PN TF++L+
Sbjct: 152 QLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLV 211
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
+C + L +AL L FG PD VT +L C +G L
Sbjct: 212 HTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHC----------------RKGML 255
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G+ + L M++ G P TYN L+S+Y G + A V M +G + TY
Sbjct: 256 GEARA---LLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTY 312
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEY 330
+ L GLC G++D+ ++ ME G + P YN++ ++ +AL
Sbjct: 313 NVLAAGLCQAGKVDEAFRLKDEME-----RLGTLLPDVVTYNTLADACFKCRCSSDALRL 367
Query: 331 LKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L++M + +A V ++ I G C DG +E A C ++M ++G P+V+ Y+ LIHA+C+
Sbjct: 368 LEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCK 427
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ +A LM EM G T NTVL LC++ A L++ + RG +P
Sbjct: 428 AGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQ---RGFMPD 484
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y ++ A ++ + A L +M+ K + P T+N+L+ LS+
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSR 532
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/504 (24%), Positives = 217/504 (43%), Gaps = 59/504 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF-NMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + + GL +A +++ + D + R + P + +N++ D K
Sbjct: 307 PDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALR 366
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M GV+ T+ I++KGLC + L+ M G+ P+ + YNTLIH+ C
Sbjct: 367 LLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHC 426
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +A +LM +M + T + ++ CKE+ A LL+ GF+PD V
Sbjct: 427 KAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEV 486
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEM 227
+ V+ A+ + +E E+ R+G++K L E+
Sbjct: 487 SYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL 546
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG +P+ TYNI+I +YC+ G L++A N M + + VT +TL+ GLC G++
Sbjct: 547 MEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKL 606
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
D LK+ + + +G K + YN+++ + ++ D AL + ME
Sbjct: 607 DKALKLFESWVE--KGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEA----------- 653
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
G P+ Y+ ++ A + R EA ++ ++ G
Sbjct: 654 ----------------------RGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT 691
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
L + + + + G K EE + + S Y+ L+ LC G F+
Sbjct: 692 LSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSA---SEAYTKLVNGLCTSGQFKE 748
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A +L +M+ KG+ D T+ +L+
Sbjct: 749 AKAILDEMMQKGMSVDSSTYITLM 772
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 239/500 (47%), Gaps = 40/500 (8%)
Query: 30 VVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILM 88
V +A + + +++ N +L VLVK +L Y ++M+++G+ T+ L+
Sbjct: 131 VEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIY-EEMISNGLSPSVITFGTLI 189
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
G C + ++ M+ +G+ P ++Y LI LC + K+ A S+ M E
Sbjct: 190 DGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVY 249
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN T++ L+ YCK N AL L + G VPDVVT +++ LC
Sbjct: 250 PNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLC----------- 298
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ G++K M + PN+ YN LI +YC+ G + A+ +F +++
Sbjct: 299 --------KFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
+S + TY LIRGLCS R ++ I + M +KEG YNS++ G +E +
Sbjct: 351 FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM--TKEGILANSVTYNSLIDGCCKEGKM 408
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D+ALE QM + + P + S I G+C N++ A + +M+ + P+VV Y +
Sbjct: 409 DKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAM 468
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR--- 439
I +C+ ++EA +L +M +G P T + +L GLC+ G + AL+L E +
Sbjct: 469 IDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQT 528
Query: 440 -------GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
G + SL Y+ LI LC+ G F A L M G+ PD + + +L
Sbjct: 529 PRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLR 588
Query: 493 CLSQQTTWLLLLLLNEMVSF 512
L Q ++L++L +M+ F
Sbjct: 589 GLF-QVKYILMMLHADMLKF 607
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 10/220 (4%)
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y LI LC +++ L + K G+ I N +LY L + + + ++
Sbjct: 118 YGELIIVLCKMELVEEALSMYH-----KVGAALTIQACNVLLYVLVKTGRFELLWRIYEE 172
Query: 334 M--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M L P + I G C G++ A+ FD+M +G VP V++Y LI C + +
Sbjct: 173 MISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNK 232
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ EA + + M G P T+NT++ G C+ N AL+L +DM +G G +P
Sbjct: 233 IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY-QDM--LGEGLVPDVVT 289
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ LI LC+ G ++A L V M+ + P+ +NSL+
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLI 329
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 33/287 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +IRGL + + +++ + + +NS++D KE +D A
Sbjct: 355 PDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEI 414
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +GV+ + T++ L+ G C + + M + + P+ V Y +I C
Sbjct: 415 C-SQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHC 473
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF------- 176
K G + A L SDM + PN T S L+ CK+ + +AL L + F
Sbjct: 474 KYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNV 533
Query: 177 ---GFVPDV---VTITKVLELLCSVGRVMDAVEILEESGEQGR-------------LGKV 217
G P + V T ++ LC G+ AV++ + G L +V
Sbjct: 534 DAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV 593
Query: 218 KGGCRFL-KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
K L +M + G +PN + IL Y E+G L SA + D++
Sbjct: 594 KYILMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLE 640
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 225/462 (48%), Gaps = 40/462 (8%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PSL +N++L L + AR M+ GV + YTY IL++ LC + +
Sbjct: 117 APSLLAYNAVLLALSDASLPSARRLL-ASMLRDGVAPNVYTYNILVRALCARGQREEALG 175
Query: 103 LL-HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
++ M+ G PN V YNTL+ + C+ G+V A L+ M E P+ VTF+ ++
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGL 235
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK + +A + ++ G PD V+ ++ C G + +A+ +
Sbjct: 236 CKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAV------------- 282
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
EM +KG +P+V T+ LI + C G L+ A+ + M+ G+ N T+ L
Sbjct: 283 ------FAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQ 333
I G C G +DD L ++ M + RI P YN ++ G + + DEA E + +
Sbjct: 337 IDGFCRNGFLDDALLAMKEMREC------RIQPSVVCYNVLINGYCKLGRMDEARELIHE 390
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
ME + P V S + G+C G+ + A +M+++G VP+ + Y LI C+E R
Sbjct: 391 MEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ +A EL ++M G P T+ T++ G C++GNV AL L +E ++ +G LP
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIK---KGVLPDVVT 507
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
YS LI L + + A LL ++ + +PD + + +L+ C
Sbjct: 508 YSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHC 549
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 235/506 (46%), Gaps = 49/506 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + T++ RA ++ + ++ + PSL FN++++ L K ++ AR
Sbjct: 188 PNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKM 247
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G+ D +Y L+ G C + + + M +GV P+ V + +LIH++C
Sbjct: 248 F-DEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMC 306
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + RA +L+ M E N+ TF+ LI +C+ L +AL+ +++ P VV
Sbjct: 307 RAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVV 366
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ C +GR+ +A E++ EME KG P+V TY+ ++
Sbjct: 367 CYNVLINGYCKLGRMDEARELIH-------------------EMEAKGMKPDVVTYSTIL 407
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S YC+ G DSA ++ M G+ + +TY +LIRGLC R+ D ++ + M + G
Sbjct: 408 SGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKM--LQLG 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +++ G +E +AL +M K + P V S+ I G ++A+
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA---------- 411
R ++ E VP+ + Y+ L+H C+ + L+K + G + A
Sbjct: 526 RLLFKLYYEDPVPDNIKYEALMHC-CRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDR 584
Query: 412 ------STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
S ++ ++ G CR GN+ AL ++ +R G P S L++ L E+G
Sbjct: 585 HWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRC---GFSPNSTSTISLVRGLFEEGMT 641
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A ++ +++ L D T +L+
Sbjct: 642 VEADNVIQELLNCCSLADAETSKALI 667
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 172/355 (48%), Gaps = 26/355 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ + ++ ++ A + +L +A LL G P+V T ++ LC+ G+ +A+ +
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ + +M GC PNV TYN L++++C G +D+A + M+
Sbjct: 177 VGD------------------DMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMRE 218
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ + VT++T++ GLC GR++D K+ M ++EG YN+++ G +
Sbjct: 219 GGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM--AREGLTPDGVSYNTLVSGYCKAGCL 276
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
EAL +M + + P V + I C GN+E A QM E G N + L
Sbjct: 277 HEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I +C+ + +A MKEM P +N +++G C+ G + A +L+ E
Sbjct: 337 IDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME---A 393
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G P YS ++ C+ G SA L +M+ KG++PD +T++SL+ L ++
Sbjct: 394 KGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 152/340 (44%), Gaps = 54/340 (15%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF-NDMKIDGISWNFVTYDTLIRG 280
R L M R G PNV TYNIL+ + C G + AL V +DM+ G + N VTY+TL+
Sbjct: 140 RLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAA 199
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
C G +D +++ +M + G + + +N+V+ GL
Sbjct: 200 FCRAGEVDAAERLVGVMREG--GVRPSLVTFNTVVNGL---------------------- 235
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
C G +EDA++ FD+M EG P+ V Y+ L+ YC+ + EA +
Sbjct: 236 -----------CKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFA 284
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM G +P TF +++ +CR GN+ A+ LV + MR RG ++ LI C
Sbjct: 285 EMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQ-MR--ERGLRMNEFTFTALIDGFC 341
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELS 520
G A + + +M I P + +N L+ + L M ++HE+
Sbjct: 342 RNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK---------LGRMDEARELIHEME 392
Query: 521 AKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRV 560
AK + + + + + G +I DT F ++R++
Sbjct: 393 AKGMKPDVVTYSTILSGY------CKIGDTDSAFELNRKM 426
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 216/440 (49%), Gaps = 27/440 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G D +Y+ ++ G C + KL+ M+ +G+KPN YN +I LCK G
Sbjct: 278 QMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337
Query: 131 KVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A R ++S+ P+ V ++ LI +CK N+ +A L ++ PD +T T
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYT 397
Query: 187 KVLELLCSVGRVMDAVEILEES----------------GEQGRLGKVKGGCRFLKEMERK 230
V+ LC GRVM+A ++ E + GK+K +M +
Sbjct: 398 AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PN+ TY L C+ G +D+A ++ ++M G+ N TY++L+ GLC G ID
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+K+++ ME + G Y +++ + + A E L+QM +L P V ++ +
Sbjct: 518 VKLMKDMEVA--GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLM 575
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC+ G +ED ++ M+E+G +PN Y+ LI YC +R +E+ + M G +
Sbjct: 576 NGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 635
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +T+N ++ G C+ N+ A + DM +G+G Y+ LIK ++ F A
Sbjct: 636 PDGNTYNILIKGHCKARNMKEAW-FLHRDM--VGKGFNLTVSSYNALIKGFYKRKKFLEA 692
Query: 469 SMLLVQMVGKGILPDYLTWN 488
L QM +G++ D +N
Sbjct: 693 RELFEQMRREGLVADREIYN 712
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 185/393 (47%), Gaps = 67/393 (17%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLL 170
GV N+ YN + HSLC+ G+V A L+ ME
Sbjct: 248 GVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR------------------------- 282
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK 230
G +PDV++ + V+ C VG + ++++EE M+ K
Sbjct: 283 ------GCIPDVISYSTVINGYCQVGELQRVLKLIEE-------------------MQIK 317
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PN TYN +I C+TG + A V +M +GI+ + V Y TLI G C G +
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Query: 291 LKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
++ M+ K +ISP Y +V+ GL + + EA + +M ++L P V
Sbjct: 378 YRLFDEMQ------KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G+C +G +++A +QM++ G PN+V Y L C+ V A+EL+ EM
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G T+N++++GLC+ GN+ A+KL+ +DM G P + Y+ L+ A C+
Sbjct: 492 KGLELNIYTYNSLVNGLCKAGNIDQAVKLM-KDMEVAGFH--PDAVTYTTLMDAYCKSRE 548
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
A LL QM+ + + P +T+N L+ C+S
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 581
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 182/429 (42%), Gaps = 59/429 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + TVI G + + V+K + + + P+ +N ++ +L K
Sbjct: 286 PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERV 345
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M++ G+ D Y L+ G C V ++L M+ R + P+ + Y +I LC+
Sbjct: 346 LREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQ 405
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V A L +M EP++VT++ LI YCKE + A L + G P++VT
Sbjct: 406 TGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T + + LC G V A E+L E +G + G + + +K+ME
Sbjct: 466 YTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TY L+ +YC++ + A ++ M + VT++ L+ G C G ++
Sbjct: 526 VAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLE 585
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
DG K+L+ M + +G + YNS++ N E + M + + P ++
Sbjct: 586 DGEKLLKWMLE--KGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643
Query: 347 KILGFCVDGNVEDA-----------------------------------KRCFDQMIEEG 371
I G C N+++A + F+QM EG
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703
Query: 372 GVPNVVIYD 380
V + IY+
Sbjct: 704 LVADREIYN 712
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 6/140 (4%)
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+DG ++ A + F + E G N Y+ + H+ CQ RV EA +L+ +M G +P
Sbjct: 231 LDG-IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVI 289
Query: 413 TFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+++TV++G C+ G + LKL+EE ++G+ P Y+ +I LC+ G A +
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLK----PNPYTYNGVILLLCKTGKVAEAERV 345
Query: 472 LVQMVGKGILPDYLTWNSLL 491
L +M+ +GI PD + + +L+
Sbjct: 346 LREMISEGIAPDGVIYTTLI 365
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 203/415 (48%), Gaps = 30/415 (7%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D +T+ L++ LC+ R+ D + M RG P+ V Y+ L+ + CK +A +L+
Sbjct: 250 DTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALL 309
Query: 140 SDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+M EP+ VT+++LI A C E ++ AL +L S G PD VT T VL+ LC
Sbjct: 310 DEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS 369
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
R + E+L EM C P+ T+N +++S C+ G++D A
Sbjct: 370 ERWKEVEELL-------------------AEMTSNNCAPDEVTFNTIVTSLCQQGLVDRA 410
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
++V + M G + VTY +++ GLC GR+DD +++L ++ G K Y +VL
Sbjct: 411 IEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLK--SYGCKPDTIAYTTVL 468
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL Q + A E + +M P V + + C G V+ A R +QM E G
Sbjct: 469 KGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCS 528
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P++V Y+C+I C E + +A EL+ ++ G P TFNT+L GLC A +L
Sbjct: 529 PDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQL 588
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+ MR P ++ +I +LC+KG A L M G +P+ T++
Sbjct: 589 MANMMRS---NCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYS 640
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 29/507 (5%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD F +IR L I D + D + +PS+ ++ +LD KE
Sbjct: 248 PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMA 307
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M A G + D TY +L+ +C V + +L + S G KP++V Y ++ SLC
Sbjct: 308 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLC 367
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ + L+++M P++VTF+ ++ + C++ + A+ +++ G V D+V
Sbjct: 368 GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIV 427
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGC---------RFLKEM 227
T + +L+ LC VGRV DAVE+L G +KG C + EM
Sbjct: 428 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
C P+ T+N +++S C+ G++D A+ V M +G S + VTY+ +I GLC+ I
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCI 547
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
DD +++L ++ G K I +N++L GL ++ ++A + + M P + +
Sbjct: 548 DDAMELLSDLQSC--GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFN 605
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I C G + A M E G VPN Y ++ A + + + A EL+ MT
Sbjct: 606 TVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG 665
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NTV+S L + G + AL L+ + G P + Y L +C + G
Sbjct: 666 --TPDLITYNTVISNLTKAGKMEEALDLLR---VMVSNGLCPDTTTYRSLAYGVCREDGT 720
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLI 492
A +L ++ G+ PD +N +L+
Sbjct: 721 DRAVRMLRRVQDTGLSPDTTFYNDVLL 747
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 235/500 (47%), Gaps = 34/500 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAFYRKKM 72
+ T++ G RA I D A L++ P FN ++ L V+ I A A + M
Sbjct: 222 YNTMVNGYCRAGRIED---ARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVF-DDM 277
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G TY+IL+ C + LL M+++G +P+ V YN LI+++C G V
Sbjct: 278 LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDV 337
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +++S++ +P+ VT++ ++ + C E LL + S PD VT +
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ LC G V A+E+++ E G +G+V L ++ GC
Sbjct: 398 VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 457
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ Y ++ C T + A ++ +M + VT++T++ LC G +D ++
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+++ M S+ G I YN ++ GL E+ D+A+E L ++ P V + + G
Sbjct: 518 VVEQM--SENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C EDA++ M+ P+ + ++ +I + CQ+ + +A E +K M +G +P
Sbjct: 576 LCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPN 635
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+ST++ V+ L + G AL+L + G+ G+ P Y+ +I L + G + A
Sbjct: 636 SSTYSIVVDALLKAGKAQAALEL----LSGMTNGT-PDLITYNTVISNLTKAGKMEEALD 690
Query: 471 LLVQMVGKGILPDYLTWNSL 490
LL MV G+ PD T+ SL
Sbjct: 691 LLRVMVSNGLCPDTTTYRSL 710
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 199/418 (47%), Gaps = 30/418 (7%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP 145
IL+K LC RV D ++ + G V YNT+++ C+ G++ AR L++ M P
Sbjct: 192 ILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMPFP 248
Query: 146 NDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
D TF+ LI A C + +AL + + G P VVT + +L+ C
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATC----------- 297
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ESG + + L EM KGC P++ TYN+LI++ C G +D AL++ +++
Sbjct: 298 -KESGYRQAMA-------LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPS 349
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + VTY +++ LC R + ++L M S + ++ +N+++ L ++
Sbjct: 350 HGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMT-SNNCAPDEVT-FNTIVTSLCQQGLV 407
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D A+E + M + V S + G C G V+DA ++ G P+ + Y +
Sbjct: 408 DRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTV 467
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ C E+ A ELM EM P TFNTV++ LC++G V A+++VE+
Sbjct: 468 LKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN-- 525
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
G P Y+ +I LC + A LL + G PD +T+N+LL L W
Sbjct: 526 -GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW 582
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 216/478 (45%), Gaps = 30/478 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + V++ L + +V + ++ N P FN+I+ L ++ + + RA
Sbjct: 354 PDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGL-VDRAIE 412
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+ G D TY+ ++ GLC RV D +LL +KS G KP+++ Y T++ LC
Sbjct: 413 VVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLC 472
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ RA LM++M P++VTF+ ++ + C++ + A+ ++E+ G PD+V
Sbjct: 473 STEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIV 532
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ LC+ + DA+E+ L +++ GC P++ T+N L+
Sbjct: 533 TYNCIIDGLCNESCIDDAMEL-------------------LSDLQSCGCKPDIVTFNTLL 573
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C + A + +M + +T++T+I LC G + ++ L++M ++ G
Sbjct: 574 KGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIM--AENG 631
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
S Y+ V+ L + + ALE L M P + + I G +E+A
Sbjct: 632 CVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDL 691
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M+ G P+ Y L + C+E+ A +++ + G P + +N VL G CR
Sbjct: 692 LRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCR 751
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
A+ + G +P Y L++AL G A LL + G+L
Sbjct: 752 DRRTDLAIDCFAH---MVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 150/339 (44%), Gaps = 34/339 (10%)
Query: 166 ALVLLEKSFSFG--FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
ALVL + S G P VV +++ LCS GRV DA + G
Sbjct: 169 ALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSA----------- 217
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
V TYN +++ YC G ++ A + N M ++ T++ LIR LC
Sbjct: 218 -----------TVVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTF---TFNPLIRALCV 263
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
GRI D L + M G + Y+ +L +E+ +A+ L +M P
Sbjct: 264 RGRIPDALAVFDDM--LHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDI 321
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ I C +G+V++A + G P+ V Y ++ + C ER +E EL+ E
Sbjct: 322 VTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
MT + P TFNT+++ LC+QG V A+++V+ G + YS ++ LC+
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSE---HGCVADIVTYSSILDGLCD 438
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
G A LL ++ G PD + + ++L L W
Sbjct: 439 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQW 477
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 243 ISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+ S + G +D AL +F+ M G V + LI+ LCS GR+ D ++ +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL--- 213
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+++ G R + ++A + M P + I CV G + DA
Sbjct: 214 --GPSATVVTYNTMVNGYCRAGRIEDARRLINGM-PFPPDTFTFNPLIRALCVRGRIPDA 270
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
FD M+ G P+VV Y L+ A C+E R+A L+ EM G P T+N +++
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+C +G+V AL ++ G P + Y+P++K+LC ++ LL +M
Sbjct: 331 MCNEGDVDEALNILSN---LPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387
Query: 481 LPDYLTWNSLLICLSQQ 497
PD +T+N+++ L QQ
Sbjct: 388 APDEVTFNTIVTSLCQQ 404
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 139/308 (45%), Gaps = 24/308 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
PPDE F TV+ L + +++ ++ + +S +P + +N I+D L E ID A
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + G + D T+ L+KGLC +R D +L+ M P+ + +NT+I SL
Sbjct: 553 LL-SDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSL 611
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ G + +A + M E PN T+SI++ A K AL LL S PD+
Sbjct: 612 CQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELL--SGMTNGTPDL 669
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
+T V+ L G++ +A+++L G R R L+
Sbjct: 670 ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRR 729
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
++ G P+ YN ++ +C D A+D F M G + TY L+ L GG
Sbjct: 730 VQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGL 789
Query: 287 IDDGLKIL 294
+D+ ++L
Sbjct: 790 LDEAKRLL 797
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 98/215 (45%), Gaps = 10/215 (4%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPDE F TVI L + ++ ++ +++ P+ ++ ++D L+K +A
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKA----GKAQ 653
Query: 68 YRKKMMASGVQG--DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
++++ G D TY ++ L ++ + LL VM S G+ P++ Y +L +
Sbjct: 654 AALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYG 713
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+C+ RA ++ +++ P+ ++ ++ +C++ A+ S G +PD
Sbjct: 714 VCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPD 773
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
T +LE L G + +A +L G L K
Sbjct: 774 ESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDK 808
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 235/459 (51%), Gaps = 36/459 (7%)
Query: 75 SGVQG----DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+GV G +++ I ++ L + +G K L M +G P+ + +LI C++G
Sbjct: 97 NGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSG 156
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K +A +M +E P+ +T+++LI YCK + AL +LE+ PDVVT
Sbjct: 157 KTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLER---MSVAPDVVTYN 213
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMERK 230
+L LC G++ +A+E+L+ ++ V + C + L EM +K
Sbjct: 214 TILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK 273
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC P+V TYN+LI+ C+ G LD A+ N+M + G N +T++ ++R +CS GR D
Sbjct: 274 GCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDA 333
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
++L M ++G + +N ++ L R+ A++ L++M K P ++ + +
Sbjct: 334 ERLLADM--LRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLL 391
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC + ++ A + M+ G P++V Y+ L+ A C++ + A E++ +++ G
Sbjct: 392 HGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCS 451
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P+ T+NTV+ GL + G A +L+EE R +G P YS L++ L +G A
Sbjct: 452 PVLITYNTVIDGLTKVGKTEYAAELLEEMRR---KGLKPDIITYSTLLRGLGCEGKVDEA 508
Query: 469 SMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
+ M G I P +T+N+++ +C +QQT+ + L
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFL 547
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 212/460 (46%), Gaps = 35/460 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD ++IRG R+ + +++ P + +N ++ K +ID A
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +A D TY +++ LC + ++ + ++L R P+ + Y LI + C
Sbjct: 200 LERMSVAP----DVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC 255
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ VG+A L+ +M + P+ VT+++LI CKE L A+ L +G P+V+
Sbjct: 256 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVI 315
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L +CS GR MDA R L +M RKGC P+V T+NILI
Sbjct: 316 THNIILRSMCSTGRWMDAE-------------------RLLADMLRKGCSPSVVTFNILI 356
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C +L A+DV M G N ++Y+ L+ G C ++D ++ L++M G
Sbjct: 357 NFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM--VSRG 414
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN++L L ++ + D A+E L Q+ P + + I G G E A
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAA 474
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++M +G P+++ Y L+ E +V EA ++ +M G P A T+N ++ GL
Sbjct: 475 ELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGL 534
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
C+ A+ + + +G P Y+ LI+ + +
Sbjct: 535 CKAQQTSRAIDFLA---YMVEKGCKPTKATYTILIEGIAD 571
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 211/432 (48%), Gaps = 37/432 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + +I G ++ ++ KA ++ R ++ P + +N+IL L +KE +++
Sbjct: 175 PDVITYNVLIGGYCKS---GEIDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEV 231
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ M D TY IL++ C + VG KLL M+ +G KP+ V YN LI
Sbjct: 232 L-----DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 286
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ +CK G++ A +++M +PN +T +I++ + C ++A LL G
Sbjct: 287 NGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCS 346
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------F 223
P VVT ++ LC + A+++LE+ + G + + G C+ +
Sbjct: 347 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEY 406
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+ M +GC P++ TYN L+++ C+ G D+A+++ N + G S +TY+T+I GL
Sbjct: 407 LEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTK 466
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRA 341
G+ + ++L+ M ++G K I Y+++L GL E + DEA++ ME L P A
Sbjct: 467 VGKTEYAAELLEEMR--RKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSA 524
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + +LG C A M+E+G P Y LI E EA EL+ E
Sbjct: 525 VTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIADEGLAEEALELLNE 584
Query: 402 MTGHGYLPIAST 413
+ G++ +S
Sbjct: 585 LCSRGFVKKSSA 596
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 225/469 (47%), Gaps = 31/469 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ +N++L L + AR F+ M++ GV + YTY IL++ LC + +
Sbjct: 154 PSVLAYNAVLLALSDASLTSARRFF-DSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L M+ G PN V YNTL+ + + G+V A L+ M E PN VTF+ ++ CK
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ +A + ++ G PD V+ ++ C G +A+ +
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSV--------------- 317
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
EM +KG +P+V T+ LI C+ G L+ A+ + M+ G+ N VT+ LI
Sbjct: 318 ----FAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALID 373
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C G +DD L ++ M+ + K + YN+++ G + DEA E L +ME L
Sbjct: 374 GFCKKGFLDDALLAVRGMKQCR--IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 431
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S I +C + + A QM+E+G +P+ + Y LI C E+R+ +A
Sbjct: 432 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV 491
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L K M G P T+ +++ G C++GNV +AL L ++ ++ G LP YS LI
Sbjct: 492 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA---GVLPDVVTYSVLIN 548
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
L + A LL ++ + +P +++L+ C + +L LL
Sbjct: 549 GLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALL 597
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 228/505 (45%), Gaps = 47/505 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + T++ RA ++ + ++ + P+L FNS+++ + K ++ AR
Sbjct: 223 PNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKV 282
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D +Y L+ G C + + M +G+ P+ V + +LIH +C
Sbjct: 283 F-DEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMC 341
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + RA +L+ M E N+VTF+ LI +CK+ L +AL+ + P VV
Sbjct: 342 KAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVV 401
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ C VGR+ +A E+L EME KG P+V TY+ +I
Sbjct: 402 CYNALINGYCMVGRMDEARELLH-------------------EMEAKGLKPDVVTYSTII 442
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S+YC+ SA ++ M G+ + +TY +LIR LC R+ D + + M K G
Sbjct: 443 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM--IKLG 500
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y S++ G +E + AL +M K + P V S+ I G +A+
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560
Query: 362 RCFDQMIEEGGVPNVVIYDCLIH---------------AYCQEERVREASELMKEMTGHG 406
+ ++ E +P YD L+H +C + + EA ++ + M
Sbjct: 561 QLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 620
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ S ++ ++ G CR GNV AL ++ ++G G P S LI+ L E G
Sbjct: 621 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQG---GFAPNSTSTISLIRGLFENGMVV 677
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A ++ Q++ L D +L+
Sbjct: 678 EADQVIQQLLNYCSLADAEASKALI 702
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 133/263 (50%), Gaps = 8/263 (3%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G +P+V YN ++ + + L SA F+ M DG++ N TY+ L+R LC G +
Sbjct: 151 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
L IL+ M + G + YN+++ +R + D A + M + L P V + +
Sbjct: 210 LSILRDMRGA--GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMV 267
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +EDA++ FD+M+ EG P+ V Y+ L+ YC+ EA + EMT G +
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P TF +++ +C+ GN+ A+ LV + MR RG ++ LI C+KG A
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQ-MR--ERGLQMNEVTFTALIDGFCKKGFLDDA 384
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
+ + M I P + +N+L+
Sbjct: 385 LLAVRGMKQCRIKPSVVCYNALI 407
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 237/513 (46%), Gaps = 30/513 (5%)
Query: 3 HSIQSPPDESIF----ITVIRGLGRARMINDVVKATDLVSRF-NMTPSLKIFNSILDVLV 57
HS+ PP +F +++ L R + ++ + R P+ +N+++ L
Sbjct: 105 HSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLC 164
Query: 58 KEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
+ DLARA Y M+ SG + D YT+ L+ G C TN+V L M RG +
Sbjct: 165 RR-ADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDV 223
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
V Y TLI LC+ G++ A L +M++P+ ++ L+ C E L++L +
Sbjct: 224 VSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKEL 283
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G+ P V++ C + +A E+L+E E+G + G++
Sbjct: 284 GWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 343
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
R L+ M+ +GC PNV TYN L+ +C G + A+ + N M+ G++ + VTY+ LIRG
Sbjct: 344 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRG 403
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
C G I+ ++L+LME +G YN+++ L ++ + D+A +E +
Sbjct: 404 QCIDGHIESAFRLLRLMEG--DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIK 461
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P AV + I G C G + A + ++M+ G P+ Y I C+ + +E
Sbjct: 462 PNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSF 521
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ EM P + V+ L ++ N G + E + G P Y+ ++A
Sbjct: 522 IGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE---MVSSGCNPDVVTYTTSMRA 578
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C +G A +L++M G+ D + +N+L+
Sbjct: 579 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 611
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 202/426 (47%), Gaps = 24/426 (5%)
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKE 160
H+ + P + YN +I SLC+ + RA +S M P+ TF+ LI YC+
Sbjct: 142 HMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRT 201
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---RLGKV 217
+ A L +K GF DVV+ ++E LC GR+ +AVE+ E + V
Sbjct: 202 NQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALV 261
Query: 218 KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
KG C L+ M+ G P+ Y ++ C A ++ +M G++
Sbjct: 262 KGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLA 321
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
VT +I C GR+ D L++L+LM+ G K + YN+++ G E + +A+
Sbjct: 322 PCVVTCTAVINAYCKEGRMSDALRVLELMK--LRGCKPNVWTYNALVQGFCNEGKVHKAM 379
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L +M + P AV +L I G C+DG++E A R M +G + + Y+ LI+A
Sbjct: 380 TLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINAL 439
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C++ R +A L + G P A TFN++++GLC+ G A K +E + + G
Sbjct: 440 CKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE---KMVSAGCT 496
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-LLLLL 505
P + YS I+ LC+ G Q + +M+ K + P + + ++ L ++ + L+
Sbjct: 497 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 556
Query: 506 LNEMVS 511
EMVS
Sbjct: 557 WGEMVS 562
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 223/512 (43%), Gaps = 40/512 (7%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
VI + ++D ++ +L+ P++ +N+++ E KM A
Sbjct: 329 AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC 388
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV D TY +L++G C+ + F+LL +M+ G+ + YN LI++LCK+G+ +A
Sbjct: 389 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 448
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
SL +E +PN VTF+ LI CK A LEK S G PD T + +E
Sbjct: 449 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEH 508
Query: 192 LCSVGRVMDAV----EILEESGEQGRLGKVKGGCRFLKE------------MERKGCLPN 235
LC + + + E+L++ + + + LKE M GC P+
Sbjct: 509 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 568
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY + +YC G L+ A +V +M +G++ + + Y+TL+ G S G+ D + IL+
Sbjct: 569 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 628
Query: 296 LMEDSKEGSKG-----------RISPYNSVL----YGLYRENQQDEALEYLKQMEK--LF 338
M R+ VL G+++ + + M+K
Sbjct: 629 QMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL 688
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + S + GF DG E+A M E+ N IY L+ +C+ +R +A L
Sbjct: 689 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 748
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ M HG++P ++ +LSGL +G A ++ M + P + +I
Sbjct: 749 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF---MNSRWKDYSPDEIVWKVIIDG 805
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L +KG + +++ + P + T+ L
Sbjct: 806 LIKKGHSDISREMIIMLERMNCRPSHQTYAML 837
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 239/506 (47%), Gaps = 30/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P E+ +++ GL R + D + V + PSL ++N++++ L K+ D A
Sbjct: 329 PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELL 388
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M G+ +D TY+IL+ C ++ L M G+K YN+LI+ C
Sbjct: 389 F-KEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHC 447
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A S +M + P V+++ LI YC + L A L + G P+
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTY 507
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEM 227
T T ++ L R+ DA + +E EQ + ++G C+ L +M
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+KG +P+ TY LISS C TG + A +D+ + N + Y L+ G C GR+
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRL 627
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D L + + M K G + Y ++ G +E LK M ++L P V +
Sbjct: 628 RDALGVCREM--VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYT 685
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+ G+V+ A +D MI+EG PN+V Y LI+ C+ + +A L KEM
Sbjct: 686 SMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVS 745
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+ L L R+G++ A++L + ++G+ L + Y+ L++ C+ G
Sbjct: 746 NSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGL----LANTVSYNILVRGFCKLGRV 801
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
+ A+ LL +M+ I PD +T+++++
Sbjct: 802 EEATKLLDEMIDNAIFPDCITYSTII 827
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 240/520 (46%), Gaps = 32/520 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKM 72
F +I+ + + + D V L+ + + P ++ +L+ L K +D+ + ++
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLF-GEI 219
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
++ G++ D Y Y +++ C +++ M+S + N V+YN LIH LCKN +V
Sbjct: 220 LSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRV 277
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + + + + ++VT+ L+ CK + ++++ GFVP ++ +
Sbjct: 278 WEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSL 337
Query: 189 LELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGC 232
+E L G+V+DA +++ + G + GK KEM KG
Sbjct: 338 VEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGL 397
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
N TY+ILI S+C G LD+A+ M + GI Y++LI G C G + +
Sbjct: 398 CANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS 457
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
M D +G K + Y S++ G + + EA +M + + P + I
Sbjct: 458 FFDEMID--KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISA 515
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+ DA R FD+M+E+ +PN V Y+ +I +C+E +A EL+ +M G +P
Sbjct: 516 LFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPD 575
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ ++S LC G V A K +++ R + + YS L+ C++G + A
Sbjct: 576 TYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLN---EMCYSALLHGYCKEGRLRDALG 632
Query: 471 LLVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEM 509
+ +MV +G+ D + + L+ + +Q T + LL M
Sbjct: 633 VCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM 672
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 205/464 (44%), Gaps = 63/464 (13%)
Query: 49 FNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+NS+++ K ++ A +F+ +M+ G++ +Y L+ G C ++ + F+L H M
Sbjct: 439 YNSLINGHCKLGNLSAAVSFF-DEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
+G+ PN+ + TLI +L + ++ A L +M E PN+VT++++I +CKE N
Sbjct: 498 TGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNT 557
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE---------------- 207
V A LL + G VPD T ++ LCS GRV +A + +++
Sbjct: 558 VKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSAL 617
Query: 208 ---SGEQGRLGKVKGGCR--------------------------------FLKEMERKGC 232
++GRL G CR LK M +
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ Y +I Y + G + A +++ M +G + N VTY TLI LC G +D
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAEL 737
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-LFPRAVDRSLKILGF 351
+ + M S S Y L L RE ++A++ M K L V ++ + GF
Sbjct: 738 LWKEMLVS--NSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGF 795
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G VE+A + D+MI+ P+ + Y +I+ C+ + A E M G P
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+N ++ G C G +G A +L +DM I RG P + L
Sbjct: 856 LAYNFLIYGCCIAGELGKAFEL-RDDM--IRRGVKPNQATHKSL 896
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 194/428 (45%), Gaps = 30/428 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ F T+I L RA + D + D + NM P+ +N +++ KE + +AF
Sbjct: 504 PNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEG-NTVKAFE 562
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G+ D YTY L+ LC T RV + K + + K N + Y+ L+H C
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622
Query: 128 KNGK----VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ +G R ++ + + V +++LI KE++ LL+ PD V
Sbjct: 623 KEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKV 682
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G V A I + M +GC PN+ TY LI
Sbjct: 683 IYTSMIDGYSKAGSVKKAFGIWD-------------------IMIDEGCTPNIVTYTTLI 723
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G++D A ++ +M + + N VTY + L G ++ K +QL D +G
Sbjct: 724 NELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSME---KAVQLHNDMLKG 780
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YN ++ G + + +EA + L +M +FP + S I C GN++ A
Sbjct: 781 LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAI 840
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+D M+ +G P+ + Y+ LI+ C + +A EL +M G P +T ++ G
Sbjct: 841 EFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGA 900
Query: 422 CRQGNVGT 429
R+ ++ T
Sbjct: 901 SRKFSIST 908
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
H + PD+ I+ ++I G +A + D++ TP++ + ++++ L K +
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLM 732
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
K+M+ S + TY + L + + LH +G+ N+V YN L
Sbjct: 733 DKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ-LHNDMLKGLLANTVSYNIL 791
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ CK G+V A L+ +M + P+ +T+S +I C+ NL A+ + + G
Sbjct: 792 VRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGL 851
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
PD + ++ C G + A E+ ++ +G
Sbjct: 852 KPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRG 885
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 150/528 (28%), Positives = 244/528 (46%), Gaps = 50/528 (9%)
Query: 24 ARMINDVVKATDLVSRFNMTP-----------SLKIFNSILDVLVKEDIDLARAF--YRK 70
A ++ + AT R N+ P S+ +N +L L + + ARA +R
Sbjct: 12 ANLLVPITTATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAG-ETARALEIFRG 70
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M GV TY ++ GLC +N +G G +L + RG P+ V YNTLI SLCK G
Sbjct: 71 EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAG 130
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF--SFGFVPDVVT 184
+ AR L M PN VT+S+LI CK + A L+++ S +P+++T
Sbjct: 131 DLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 190
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL-------------------GKVKGGCRFLK 225
L+ LC +A E++ S G L G+ C
Sbjct: 191 YNSFLDGLCKQSMTAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--D 247
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M G +PNV TYN L++ C+ ++ A + M G++ + +TY L+ C
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
R+D+ L++L M + G + +NS++ GL + ++ EA + Q+ L P V
Sbjct: 308 RVDEALELLHGM--ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVT 365
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I G C GN E A F++M+ + P+V+ + LI C+ +V A +++ M
Sbjct: 366 FNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMG 425
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P T+N ++ GLC+ G + + +EE + G +P S Y L+ ALC
Sbjct: 426 NLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEE---MVSSGCVPESMTYGSLVYALCRAS 482
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMV 510
A L+ ++ G PD +T+N L+ L + T + +L EMV
Sbjct: 483 RTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 530
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 217/459 (47%), Gaps = 38/459 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKEDIDLARA 66
P+ + +I GL + I++ + ++R ++ P++ +NS LD L K+ + A A
Sbjct: 149 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMT-AEA 207
Query: 67 FYRKKMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ + G V D T++ L+ GLC + + M + G PN V YN L+
Sbjct: 208 CELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALV 265
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ LCK K+ RA +++ M + P+ +T+S+L+ A+CK + AL LL S G
Sbjct: 266 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+VVT +++ LC R +A +I ++ + +P+ T+
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIA-------------------LQVYNRMLVPDKVTF 366
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
NILI+ C+ G + A +F +M + + +T+ LI GLC G+++ IL LM
Sbjct: 367 NILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLM-- 424
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
G + YN +++GL + + +E E+L++M P ++ + C
Sbjct: 425 GNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRT 484
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+DA + ++ G P+ V Y+ L+ + + +A +++EM G G+ P + TF
Sbjct: 485 DDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 544
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
GL R GN+ ++L+ + +G LP + S ++
Sbjct: 545 FGGLHRSGNLAGTMELLRVVL---AKGMLPDATTCSSIL 580
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +I GL +A + DL+ + P++ +N ++ L K +
Sbjct: 396 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEF 455
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M++SG + TY L+ LC +R D +L+ +KS G P++V YN L+ L K
Sbjct: 456 LEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWK 515
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK +A +++ +M +P+ TF+ + NL + LL + G +PD T
Sbjct: 516 SGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575
Query: 185 ITKVLE 190
+ +L+
Sbjct: 576 CSSILD 581
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 143/535 (26%), Positives = 242/535 (45%), Gaps = 77/535 (14%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDIDLARAFYR 69
++F V++ I + DL P + +N+ILD +V+ + + A YR
Sbjct: 133 AVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYR 192
Query: 70 KKMMASGVQGDDYTYAILMKGLCLT----------------------------------- 94
+ M+ASGV + ++Y IL++G C
Sbjct: 193 E-MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKL 251
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
R+ + FKLL M G++PN + YN +I+ LC+ G++ ++++M+ P+ VT+
Sbjct: 252 KRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTY 311
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ YCK N ALVL + G PDVVT T ++ +C G + A+E
Sbjct: 312 NTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAME------- 364
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
F +M +G PN TY LI+ + + G +D A ++++M G
Sbjct: 365 ------------FFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPT 412
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY+ L+ G C GR+++ + +L+ ME +G + Y++++ G R + D A +
Sbjct: 413 IVTYNALLNGHCVSGRMEEAIGLLRGMEG--KGLSPDVVSYSTIIAGFCRYQELDRAFQM 470
Query: 331 LKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+M EK + P A+ S I G C + +A F +M+ + +P+ Y LI+ YC+
Sbjct: 471 NAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCK 530
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV------EEDMRGIG 442
E + EA L EM G+LP T+N +++GL +Q A +L+ E GI
Sbjct: 531 EGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGIT 590
Query: 443 RGSLPGS------GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+L S LIK C KG A + M+ + P+ +N ++
Sbjct: 591 YDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVII 645
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 225/516 (43%), Gaps = 52/516 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + TVI + + I++ K + + P+L +N +++ L + +
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D TY L+ G C L M G+ P+ V Y +LI+++CK
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCK 355
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA M PN VT++ LI + ++ + A + ++ GF P +VT
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGK------------VKGGCRFLK------- 225
+L C GR+ +A+ +L +G GK + G CR+ +
Sbjct: 416 YNALLNGHCVSGRMEEAIGLL-----RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQM 470
Query: 226 --EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
EM KG P+ TY+ LI CE L+ A D+F +M + + TY +LI G C
Sbjct: 471 NAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCK 530
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--------- 334
G +++ L + M K+G YN ++ GL ++ + EA L ++
Sbjct: 531 EGDLNEALNLHDEM--IKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588
Query: 335 ---EKLFPRAVDRSLK-----ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ L D K I GFC+ G + +A + F+ MI+ PN +Y+ +IH +
Sbjct: 589 ITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGH 648
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C++ V +A +L KEM G++P T ++ L +G + L LV D+ + L
Sbjct: 649 CRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQLNLVIRDI--LRSCKL 705
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ L++ ++G + LL +M G LP
Sbjct: 706 SDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 208/442 (47%), Gaps = 30/442 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T++ GL I D VK D + + P + +++I++ L K
Sbjct: 8 PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM G + + Y ++ LC V + M G+ P+ Y++++H C
Sbjct: 68 LKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN 127
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V A SL M E PN VTF+ILI CK+ + A ++ E G PDV T
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ CS + MD + + M+RKGC PNV +YNILI+
Sbjct: 188 YNALVDGYCSRSQ-MDEAQ------------------KLFNIMDRKGCAPNVRSYNILIN 228
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C++G +D A + +M ++ + TY TL+RG C GR + ++L+ M G
Sbjct: 229 GHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM--CSYGL 286
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ VL GL + DEA E LK M+ K+ P ++ I G C G +E A+
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + +G P VV Y +I + EA EL +EM +G LP + T+N ++ G
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406
Query: 423 RQGNVGTALKLVEEDMRGIGRG 444
R G+ A++L+EE +G+G
Sbjct: 407 RNGDTPNAVRLIEE---MVGKG 425
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 205/441 (46%), Gaps = 27/441 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G+Q T+ L+ GLC ++ D KL M G +P+ + Y+T+I+ LCK G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A L+ MEE PN V ++ +I + CK+ + A+ + G PDV T +
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMERKG 231
+L C++GRV +A + ++ E+ + + G C+ + M KG
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+V TYN L+ YC +D A +FN M G + N +Y+ LI G C GRID+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
+L M S + I Y++++ G + + EA E LK+M L P + S+ +
Sbjct: 241 GLLAEM--SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLD 298
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C G++++A M E PN+ IY LI C ++ A EL + G P
Sbjct: 299 GLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++SGL + G A +L E G LP S Y+ +I+ G +A
Sbjct: 359 TVVTYTVMISGLLKGGLSNEACELFREMAV---NGCLPNSCTYNVIIQGFLRNGDTPNAV 415
Query: 470 MLLVQMVGKGILPDYLTWNSL 490
L+ +MVGKG D T+ L
Sbjct: 416 RLIEEMVGKGFSADSSTFRML 436
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 184/384 (47%), Gaps = 59/384 (15%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+P VTF+ L+ C + +++A+ L ++ G PDV+T + ++ LC +G A++
Sbjct: 7 QPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQ 66
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L K+ME KGC PNV YN +I S C+ ++ A+D F++M
Sbjct: 67 LL-------------------KKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMV 107
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED------------------------ 299
+GI + TY +++ G C+ GR+++ + + M +
Sbjct: 108 KEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMIS 167
Query: 300 ---------SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL- 349
+++G + + YN+++ G +Q DEA + M++ RS IL
Sbjct: 168 EAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILI 227
Query: 350 -GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +++AK +M + P++ Y L+ +CQ R +EA EL+KEM +G L
Sbjct: 228 NGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLL 287
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQS 467
P T++ VL GLC+ G++ A +L ++ + + P Y+ LI+ +C G ++
Sbjct: 288 PNLITYSIVLDGLCKHGHLDEAFEL----LKAMQESKIEPNIFIYTILIEGMCTFGKLEA 343
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L + KGI P +T+ ++
Sbjct: 344 ARELFSNLFVKGIQPTVVTYTVMI 367
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 159/331 (48%), Gaps = 25/331 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + +++ G +N+ + N+ P+ F ++D L K+ +
Sbjct: 112 PPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWL 171
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G++ D YTY L+ G C +++ + KL ++M +G PN YN LI+ C
Sbjct: 172 VFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHC 231
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ A+ L+++M P+ T+S L+ +C+ A LL++ S+G +P+++
Sbjct: 232 KSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLI 291
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + VL+ LC G + +A E+ LK M+ PN+ Y ILI
Sbjct: 292 TYSIVLDGLCKHGHLDEAFEL-------------------LKAMQESKIEPNIFIYTILI 332
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C G L++A ++F+++ + GI VTY +I GL GG ++ ++ + M + G
Sbjct: 333 EGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREM--AVNG 390
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
YN ++ G R A+ +++M
Sbjct: 391 CLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM 421
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M + G P +V ++ L+ C + ++ +A +L EM G+ P T++T+++GLC+ GN
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
AL+L+++ +G P Y+ +I +LC+ A +MV +GI PD T
Sbjct: 61 TTMALQLLKKMEE---KGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117
Query: 487 WNSLL 491
++S+L
Sbjct: 118 YSSIL 122
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 12/185 (6%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD + T++RG GR + +++K + + + P+L ++ +LD L K L
Sbjct: 253 PDIFTYSTLMRGFCQVGRPQEAQELLKE---MCSYGLLPNLITYSIVLDGLCKHG-HLDE 308
Query: 66 AF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF K M S ++ + + Y IL++G+C ++ +L + +G++P V Y +I
Sbjct: 309 AFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMIS 368
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L K G A L +M PN T++++I + + + NA+ L+E+ GF
Sbjct: 369 GLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSA 428
Query: 181 DVVTI 185
D T
Sbjct: 429 DSSTF 433
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 225/461 (48%), Gaps = 32/461 (6%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P+L FN++++ K ++ +A+A++ +M G D +TY L+ G C + +GD +K
Sbjct: 188 PNLISFNTMVNAHCKIGNVVVAKAYF-CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYK 246
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+ +M G N V Y LIH C+ GK+ A L M+E P+ T+++L+ A+C
Sbjct: 247 VFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFC 306
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ AL E+ G P+V T T +++ C VG++ + +E+
Sbjct: 307 EVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEM-------------- 352
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
L M KG + +V +N LI YC+ G+++ A+ V + MK++ + N TY+ LI
Sbjct: 353 -----LSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELI 407
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--LEYLKQMEK 336
G C +D + +L M ++K + YN++++GL + D A L +L +
Sbjct: 408 CGFCRKKSMDRAMALLNKMYENKLSP--NLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P I C G VE A + F+ + E+ N +Y LI YC+ E+ +A
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAH 525
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
L K M G P + TFN +L GL ++G V A+ LV D+ G + P Y+ LI
Sbjct: 526 LLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV--DVMG-KFDAKPTVHTYTILI 582
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ + + F A+M L QM+ G P+ +T+ + + +Q
Sbjct: 583 EEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQ 623
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 186/395 (47%), Gaps = 27/395 (6%)
Query: 119 YNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSF 174
YN L L + G + L DM EPN ++F+ ++ A+CK N+V A
Sbjct: 158 YNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLM 217
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVK 218
FGF D T T ++ C + + DA ++ E ++G +GK+
Sbjct: 218 KFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKID 277
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+M+ GC P+V TY +L++++CE G AL F +M +GI N TY LI
Sbjct: 278 EALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLI 337
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--K 336
C G++D+G+++L M + +G + P+N+++ G + ++A+ L M+ K
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLE--KGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + + I GFC +++ A ++M E PN+V Y+ LIH C+ V A
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
L M G++P TF + LC+ G V A ++ E + + Y+ LI
Sbjct: 456 RLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKE---KHAEANEFLYTALI 512
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+ F A +L +M+ +G P+ +T+N LL
Sbjct: 513 DGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLL 547
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 212/499 (42%), Gaps = 34/499 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-DVLVKEDIDLARAFYRKKM 72
F +I G + M+ D + D + + P+ + +N ++ K+ +D A A K M
Sbjct: 368 FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNK-M 426
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ + + TY L+ GLC V ++L H+M G P+ + I LCK GKV
Sbjct: 427 YENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKV 486
Query: 133 GRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
+A SL E N+ ++ LI YCK E +A +L ++ G P+ +T +
Sbjct: 487 EQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVL 546
Query: 189 LELLCSVGRVMDAVEILEESG----------------EQGRLGKVKGGCRFLKEMERKGC 232
L+ L G+V DA+ +++ G E R FL +M GC
Sbjct: 547 LDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGC 606
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV TY I +YC G L A ++ +K +GI + YD L+ G++D
Sbjct: 607 QPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFG 666
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFC 352
+L M D+ G + Y+ +L L E E + L + + S+
Sbjct: 667 VLIRMFDT--GCEPSRQTYSILLKHLIFEKYNKEGM-------GLDLNSTNISVDNANIW 717
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+ E F++M+E+G VPNV Y LI C+ E + A L M G P +
Sbjct: 718 KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSEN 777
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
N++LS C+ G AL+L++ M L Y L+ L E+G + A +
Sbjct: 778 IHNSLLSSCCKLGMHEEALRLLDSMME---YNHLAHLESYKLLVCGLFEQGNQEKAEEIF 834
Query: 473 VQMVGKGILPDYLTWNSLL 491
++ G D + W LL
Sbjct: 835 RSLLSCGYNYDEVVWKVLL 853
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 42/294 (14%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV---------------------- 272
+V +YN L G++D +F DM DG+ N +
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213
Query: 273 -------------TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
TY +LI G C + D K+ ++M +EG Y ++++G
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIM--PQEGCLRNEVSYTNLIHGFC 271
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ DEALE QM++ FP ++ + FC G +A + F++M+E G PNV
Sbjct: 272 EVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVY 331
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y LI +C+ ++ E E++ M G + FN ++ G C++G + A+ ++ D
Sbjct: 332 TYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVL--D 389
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + P S Y+ LI C K A LL +M + P+ +T+N+L+
Sbjct: 390 SMKLNK-VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 155/331 (46%), Gaps = 36/331 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F ++ GL + + D + D++ +F+ P++ + +++ +++E D D A F
Sbjct: 538 PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMF 597
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M++SG Q + TY +K C R+ + +++ +K G+ +S IY+ L+++
Sbjct: 598 L-DQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYG 656
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A ++ M EP+ T+SIL+ ++ EK G
Sbjct: 657 CIGQLDSAFGVLIRMFDTGCEPSRQTYSILL-----------KHLIFEKYNKEG------ 699
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+G +++ I ++ ++ + ++M +GC+PNV+TY+ LI
Sbjct: 700 -----------MGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLI 748
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ L A +FN MK GIS + +++L+ C G ++ L++L M +
Sbjct: 749 KGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNH- 807
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ Y ++ GL+ + Q++A E + +
Sbjct: 808 -LAHLESYKLLVCGLFEQGNQEKAEEIFRSL 837
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+KM+ G + TY+ L+KGLC + F+L + MK G+ P+ I+N+L+ S CK
Sbjct: 730 EKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKL 789
Query: 130 GKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G A L+ M E N + ++ +L+C ++ N A + S G+ D V
Sbjct: 790 GMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVW 849
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE-MERKGCLPNVDTYNIL 242
+L+ L G V + C L++ ME+ GC + DT+ +L
Sbjct: 850 KVLLDGLVRKGYVDE--------------------CSQLRDIMEKTGCRLHSDTHTML 887
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 216/466 (46%), Gaps = 27/466 (5%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L I+N++++ L K+ KK+ S + D +TY ++ G C + + ++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
+ M G +PN+V Y+TLI+ LC +G+V A L+ +M P T + I A C
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG---- 215
+A L + G P+V T T ++ LC G + A+ + G
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 216 ------------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
++K L M R GC PN+ TYN +I YC G A+ V N+M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G S N VTY+T+I+G C G L+IL LM D G K Y ++ G + ++
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG--GCKPDEWSYTELICGFCKISK 510
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ A +M + L P V + I G+C D ++ A + M G PNV Y+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LIH ++ A EL K M G P T+ ++ GLC+ G+ AL++ + I
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN---KMI 627
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+G LP YS LI+AL ++G + A L ++ G++PD +T+
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 228/503 (45%), Gaps = 69/503 (13%)
Query: 61 IDLARAFYRKKMMA-----------SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
I L ++ + K+ MA SG++ + Y+ L+ L H M S
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
GV+PN +IYN +I++LCK+G V A ++M + E P+ T++ +I +C++ +L +
Sbjct: 209 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG------ 219
AL + + G P+ VT + ++ LC GRV +A +++ E G L
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 220 -----GC-----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
GC R +M+ KGC PNV TY LIS C +G+L A+ +F+ M DG+
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDS----------------------------- 300
N VTY+ LI L RI +L LM +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 301 ----KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+ G + YN+++ G AL L M P + I GFC
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+E A F++M+++G PN V Y LI YC++E++ A+ L++ M G P T+
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ GL +Q N A +L + I G P Y+ +I LC+ G A + +
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKV---MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ +G LP+ LT++SL+ L Q+
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQE 648
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 222/509 (43%), Gaps = 64/509 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P+ I+ VI L + + D V M+P + S IL K D+D A
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL------------HV--------- 106
+ +M G + + TY+ L+ GLC + RV + F L+ H
Sbjct: 273 F-NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC 331
Query: 107 --------------MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
MK++G +PN Y LI LC +G + A L M PN V
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ LI + + A V+L G P++VT ++++ C +G A+ ++
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 209 GEQGRLGK-------VKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G +KG C R L M GC P+ +Y LI +C+ +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+SA +FN+M DG+ N VTY LI G C ++D +L+ M+ S G + + YN
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS--GCRPNVQTYN 569
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++GL ++N A E K M E +FP V + I G C +G+ A F++MIE+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PN++ Y LI A QE +V EA L E+ HG +P T+ ++ G V A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ R I G P Y LIK L
Sbjct: 690 FNFLG---RMIKAGCQPTLWTYGVLIKGL 715
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 163/398 (40%), Gaps = 44/398 (11%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + D+++Y L+ G C +++ F L + M G+ PN V Y LI CK+ K
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A SL+ M+ PN T+++LI K+ N A L + G P+VVT T
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKG 231
+++ LC G A+E+ + EQG L GKV+ E+ER G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL---------- 281
+P+ TY +I +Y +G ++ A + M G TY LI+GL
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725
Query: 282 ----------CS-GGRIDDGLKILQLMEDSKEGSKG-RISPYNSVLYGLYRENQQDEALE 329
CS G + D + + E G + N+++ L + EA E
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 785
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L M + L P + + NV+ A F M +G ++ Y LI A C
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q R +EA + M + P ++ GL R G
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 257/526 (48%), Gaps = 31/526 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVS-RFNMTPSLKIFNSILDVLVKED-IDLARAF 67
D IF+ + G+ + ++VV ++ + + P + +N +L+VLV + + L +
Sbjct: 131 DRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESA 190
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ ++ D T+ IL+K LC ++V ++ M S G+ P+ + T++
Sbjct: 191 H-SSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYI 249
Query: 128 KNGKVGRARSLMSDMEE---P-NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + A + M E P DVT ++LI +CK+ + AL ++++ S GF PD
Sbjct: 250 EGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQF 309
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ LC +G A+E+++ G +LG+++ + L +M
Sbjct: 310 TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM 369
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ C PN TYN +ISS C+ +D A ++ + GI + T+++LI+GLC
Sbjct: 370 VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH 429
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRS 345
+ + + M+ +G + YN ++ L + +EAL LK+ME V +
Sbjct: 430 KSAMDLFEEMKG--KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYN 487
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I GFC + +E+A+ FD+M +G + V Y+ LI C+ +RV +A++LM +M
Sbjct: 488 TLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIME 547
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+N++L+ C+ G++ A +V+ G P Y+ LI LC+ G
Sbjct: 548 GLRPDKFTYNSLLTHFCKTGDIKKAADIVQT---MTSSGCNPDIVTYATLISGLCKAGRV 604
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQT-TWLLLLLLNEMV 510
Q AS LL + KG++ +N ++ L ++ T + L EM+
Sbjct: 605 QVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREML 650
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 236/475 (49%), Gaps = 30/475 (6%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N PS ++ IL L K ++M SG + D + I ++ +
Sbjct: 92 NFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEV 151
Query: 101 FKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP---NDV-TFSILIC 155
++ VM+ +KP++ YN L++ L K+ S S M +DV TF+ILI
Sbjct: 152 VGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIK 211
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
A CK + A++++E+ S+G PD T T +++ G + A+ I E+ E G
Sbjct: 212 ALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPC 271
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+ G++ F++E +G P+ TYN L++ C+ G A++V
Sbjct: 272 TDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVV 331
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M + G+ + TY++LI GLC G I++ +KIL M S++ S ++ YN+++ L
Sbjct: 332 DAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMV-SRDCSPNAVT-YNAIISSLC 389
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+EN+ DEA E + + + + P + I G C+ N + A F++M +G P+
Sbjct: 390 KENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEF 449
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE- 436
Y+ LI + C ++ EA L+KEM +G +NT++ G C+ + A ++ +E
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+++G+ R S+ Y+ LI LC+ + A+ L+ QM+ +G+ PD T+NSLL
Sbjct: 510 ELQGVSRDSVT----YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLL 560
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 222/476 (46%), Gaps = 30/476 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PDE+ F T+++G ++ ++ + + + + N +++ K+ ID A +F
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 295
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ ++ G + D +TY L+ GLC +++ M G+ P+ YN+LI LC
Sbjct: 296 I-QEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLC 354
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A ++ M PN VT++ +I + CKE + A + S G +PDV
Sbjct: 355 KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVC 414
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ LC A+++ EE +G K++ LKEM
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E GC NV YN LI +C+ ++ A ++F++M++ G+S + VTY+TLI GLC R+
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+D +++ M EG + YNS+L + +A + ++ M P V +
Sbjct: 535 EDAAQLMDQM--IMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYA 592
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C G V+ A R + +G V Y+ +I A + R EA L +EM
Sbjct: 593 TLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDK 652
Query: 406 GYLPIASTFNTVLSGLCRQGN-VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
P A T+ V GLC G +G A+ E I RG++P + L + LC
Sbjct: 653 SEPPDAITYKIVYRGLCNGGGPIGEAVDFTVE---MIERGNIPEFSSFVMLAEGLC 705
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 151/300 (50%), Gaps = 15/300 (5%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
EIL + G+ G ++ R L+EM+ GC + + I + SY + + D + + M
Sbjct: 102 EILRKLGKAGSFEYMR---RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVM 158
Query: 263 KID-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR--ISPYNSVLYGLY 319
+ + I + Y+ L+ L + LK+++ S + R +S +N ++ L
Sbjct: 159 EDEYRIKPDTRFYNVLLNVLVDANK----LKLVESAHSSMVRRRIRHDVSTFNILIKALC 214
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +Q A+ +++M L P + + G+ GN++ A R +QM+E G V
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+ LI+ +C++ R+ +A ++E G+ P T+NT+++GLC+ G+ A+++V+
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ G G P Y+ LI LC+ G + A +L QMV + P+ +T+N+++ L ++
Sbjct: 335 LLG---GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKE 391
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 162/389 (41%), Gaps = 61/389 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I L + +++ + L++ + P + FNS++ L +
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G + D++TY +L+ LC + ++ + LL M+ G N VIYNTLI CK
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N ++ A + +ME + VT++ LI CK + + +A L+++ G PD T
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFT 555
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+L C G + A +I++ G + G+V+ R L+ ++
Sbjct: 556 YNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQ 615
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-----KIDGISWN------------- 270
KG + YN +I + + A+ +F +M D I++
Sbjct: 616 MKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPI 675
Query: 271 ------------------FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
F ++ L GLC+ D +K++ ++ + + S+ I
Sbjct: 676 GEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREI---- 731
Query: 313 SVLYGLYRENQQDEALEYLKQ-MEKLFPR 340
S + G + + +AL L ++ ++PR
Sbjct: 732 STIRGFLKIRKFQDALSTLGGILDDMYPR 760
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 255/538 (47%), Gaps = 42/538 (7%)
Query: 12 SIFI--TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
++FI V++GL R + + + + R +++P + +N++++ L K
Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M A+G + T LM GLC R+ + +LL MK +G + V+Y TLI C N
Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + R + L +M N VT+S L+ C+ A +L G PDVVT
Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322
Query: 186 TKVLELLCSVGRV---MDAVEILEESGEQG-------------RLGKVKGGCRFLKEMER 229
T +++ LC GR MD + ++ E GE+ + G V + L+ M
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDM--KIDGISWNFVTYDTLIRGLCSGGRI 287
KG +V TYN L+ C+ G +D AL +FN M + + N T++ LI GLC GR+
Sbjct: 383 KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 442
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+KI + M K+GS G + YN +L G + + EA+E KQ+ L P + S
Sbjct: 443 TKAVKIHRKM--VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I GFC + AK F +M G P + Y+ L+ + C+E + +A L +EM
Sbjct: 501 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P +FNT++ G + G+ + V+E M+ + G P + +S LI L + G
Sbjct: 561 NCEPDIISFNTMIDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE 616
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAK 522
A L +MV G PD L ++SLL LS + + + ++H+++AK
Sbjct: 617 LDEAKSALERMVASGFTPDALVYDSLLKGLSSK---------GDTTEIINLLHQMAAK 665
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 237/512 (46%), Gaps = 66/512 (12%)
Query: 40 FNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
FN+ PS N ++D L + + LA + YR+ M V + + L++ +
Sbjct: 68 FNLLPSWATCNFLVDALARSRNYGLAFSVYRR-MTHVDVLPSFGSLSALIECFADAQKPQ 126
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILI 154
GF ++ ++ RG N I N ++ LC+NG V A L+ +M P+ V+++ LI
Sbjct: 127 LGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLI 186
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-- 212
CK + L A+ LL + + G P+ VT T +++ LC GR+ +A+E+LE ++G
Sbjct: 187 NGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFD 246
Query: 213 -------------------------------------------------RLGKVKGGCRF 223
RLG+ K
Sbjct: 247 ADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTV 306
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L M G P+V TY LI C+ G A+D+ N M G + VTY+ L+ GLC
Sbjct: 307 LNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFP 339
G + D KIL++M + +G K + YN+++ GL + + DEAL+ M L P
Sbjct: 367 EGLVIDAFKILRMMIE--KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEP 424
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
++ I G C +G + A + +M+++G N+V Y+ L+ + +++EA EL
Sbjct: 425 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 484
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
K++ G++P + T++ ++ G C+ + A L E MR G P Y+ L+ +L
Sbjct: 485 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE-MRTHGLN--PALFDYNTLMASL 541
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C++G + A L +M PD +++N+++
Sbjct: 542 CKEGSLEQAKSLFQEMGNANCEPDIISFNTMI 573
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 199/437 (45%), Gaps = 40/437 (9%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGD 80
LG+ + N V+ A ++ + P + + ++D L K+ M+ G +
Sbjct: 297 LGQWKEANTVLNA---MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 353
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ TY +L+ GLC V D FK+L +M +G K + V YNTL+ LC GKV A L +
Sbjct: 354 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 413
Query: 141 DME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
M EPN TF++LI CKE L A+ + K G ++VT +L
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G++ +A+E+ K++ G +PN TY+ILI +C+ +L+
Sbjct: 474 AGKIKEAMELW-------------------KQVLDLGFVPNSFTYSILIDGFCKMRMLNI 514
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A +F +M+ G++ Y+TL+ LC G ++ + Q M ++ + I +N++
Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN--CEPDIISFNTM 572
Query: 315 LYGLYRENQQDEALEYLKQMEK------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ G + +++K+++ L P A+ S I G +++AK ++M+
Sbjct: 573 IDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 628
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+ ++YD L+ + E L+ +M G + +T+L+ LC
Sbjct: 629 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEV 688
Query: 429 TALKLVEEDMRGIGRGS 445
++L+ +G G+
Sbjct: 689 DVMELLPTFFQGTSEGA 705
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 171/356 (48%), Gaps = 25/356 (7%)
Query: 156 AYCKEEN--LVNALVLLEKSFSFGFVPDVVTITKVLELLC---------SVGRVMDAVEI 204
+ C++ N A+ L + F +P T +++ L SV R M V++
Sbjct: 46 SLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDV 105
Query: 205 LEESGEQGRL-------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
L G L K + G + + ++G NV NI++ C G + A+
Sbjct: 106 LPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMG 165
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ +M +S + V+Y+TLI GLC ++ + + +L ME + G +++ G
Sbjct: 166 LIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA--GCFPNSVTCTTLMDG 223
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L ++ + DEA+E L+ M+K V I GFC +GN++ K FD+M+ +G N
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VV Y CL+H C+ + +EA+ ++ M HG P T+ ++ GLC+ G A+ L+
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G P + Y+ L+ LC++G A +L M+ KG D +T+N+L+
Sbjct: 344 ---LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLM 396
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F T+I G +A V + + + P F+++++ L K ++D A++
Sbjct: 564 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 623
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ASG D Y L+KGL + LLH M ++G + I +T++ LC
Sbjct: 624 L-ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 29/448 (6%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+ M GV D TY L+ C V + F+LL+ SRG++P + YN +++ L
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK GK RA+ ++ +M + PN T++ L+ C+ +N++ A + ++ G +PD+
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
V+ + ++ +L G + A+ E G R G + + E
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +GC +V TYN ++ C+ + A +FN+M G+ +F T+ TLIRG C G
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+D L + + M + K YN+++ G + + A E M + + P +
Sbjct: 518 MDKALNLFEAM--VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ GFC G + +A DQM+E+G PN+V + LI YC+ + +A E + +M
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKG 463
+G +P + ++NT++ G ++ N+ A L+ E + RG+ + Y+ ++ C +G
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT----YNLILNGFCAEG 691
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A +L +M+ GI PD T++SL+
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLI 719
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 33/410 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + + T++ + R I + + D +SR + P L F+S++ VL + +
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M SG+ D+ Y IL+ G C + D K+ M +RG + V YNT ++ LCK
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A L ++M E P+ TF+ LI YCK+ N+ AL L E PD VT
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C G + A E+ + +M RK +P+ +Y +++
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWD-------------------DMIRKDIIPDHISYGTVLN 580
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C +G+L AL++ + M GI N VT +TLI+G C G + + L SK S
Sbjct: 581 GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL-----SKMIS 635
Query: 305 KGRIS---PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G I YN+++ G +E ++A + +MEK L + +L + GFC +G +++
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
A++ +MIE G P+ Y LI+ + ++ ++EA EM G +P
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 227/462 (49%), Gaps = 31/462 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
D + T+I R ++ + + + S M P L +N+IL L K D A+
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+ + TY L+ +C + + + ++ M RGV P+ V +++LI L +
Sbjct: 351 -IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + +A +ME P++V ++ILI +C+ L +AL + ++ + G DVVT
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEME 228
L LC DA + E E+G + ++G C+ + M
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R P+ TYN LI +C+ G + A ++++DM I + ++Y T++ G CS G +
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589
Query: 289 DGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ L + Q++E +G + + N+++ G R +A EYL +M + P + +
Sbjct: 590 EALNLCDQMLE---KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+ + N+E A ++M + G N++ Y+ +++ +C E +++EA +++++M
Sbjct: 647 TLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
G P +T++++++G Q N+ A + +E ++ RG +P
Sbjct: 707 GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ---RGLVP 745
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 195/414 (47%), Gaps = 30/414 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +L++ ++ +G + +++ +GV + N L+ L + G V A + ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E N T +I++ A CK+ N + L G D+VT ++ C G V
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A ++L +G ME P + TYN ++ C+ G D A DV
Sbjct: 310 EAFQLLNSFSSRG--------------ME-----PGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+M G++ N TY+TL+ +C I + +I E S+ G + ++S++ L
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFD--EMSRRGVLPDLVSFSSLIGVLA 408
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R +AL + ++ME+ + P V ++ I GFC +G + DA + D+M+ G +VV
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ ++ C+++ +A L EM G +P TF T++ G C+ GN+ AL L E
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R + P Y+ LI C+ G A L M+ K I+PD++++ ++L
Sbjct: 529 VRTNLK---PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 7/228 (3%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+ YD L+R ++ +G + Q++ ++G I+ N +L GL R D A E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILR--RKGVSVSINACNKLLGGLVRTGWVDLAWEIY 245
Query: 332 KQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
++ + +L I+ C D E+ M +G ++V Y+ LI+AYC+E
Sbjct: 246 GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
V EA +L+ + G P T+N +L GLC+ G A ++ E ++ G P +
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQ---LGLTPNA 362
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ L+ +C + A + +M +G+LPD ++++SL+ L++
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + TV+ G + ++ + + D + + P+L N+++ + D+ +A+
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG-DMPKAYE 628
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y KM+++G+ D ++Y L+ G + F L++ M+ RG++ N + YN +++ C
Sbjct: 629 YLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC 688
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
GK+ A ++ M E P+ T+S LI + ++N+ A ++ G VPD
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 327 ALEYLKQMEKLFPRAVDRSLKI---LGFCVDGN-VEDAKRCFDQMIEEGGVPNV------ 376
L+++ + FP SL + + F V G + +A+ C +M+ + GV V
Sbjct: 117 GLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESL 176
Query: 377 -----------VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+IYD L+ Y Q +++RE SE + + G + N +L GL R G
Sbjct: 177 ISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTG 236
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
V A ++ E +RG G + ++ ALC+ F++ L M GKG+ D +
Sbjct: 237 WVDLAWEIYGEVVRG---GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIV 293
Query: 486 TWNSLL 491
T+N+L+
Sbjct: 294 TYNTLI 299
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 230/461 (49%), Gaps = 42/461 (9%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYA 85
+ND + + + + P+ FN + + + + DL F K M +G++ D YT
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFC-KGMELNGIEHDMYTMT 109
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
I++ C ++ F +L G +P+++ ++TL++ C G+V A +L+ M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ VT S LI C + + ALVL+++ +GF PD VT VL LC G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+++ ++ME + +V Y+I+I S C+ G D AL +FN+
Sbjct: 230 LDLF-------------------RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR-----ISPYNSVLY 316
M++ GI + VTY +LI GLC+ G+ DDG K+L+ M GR + +++++
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-------IGRNIIPDVVTFSALID 323
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
+E + EA E +M + P + + I GFC + + +A + FD M+ +G P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y LI++YC+ +RV + L +E++ G +P T+NT++ G C+ G + A +L
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+E + RG P Y L+ LC+ G A + +M
Sbjct: 444 QE---MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 227/499 (45%), Gaps = 38/499 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD F T++ G +++ V D + P L +++++ L +K + A
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G Q D+ TY ++ LC + L M+ R +K + V Y+ +I SLC
Sbjct: 198 I-DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G A SL ++ME + + VT+S LI C + + +L + +PDVV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++++ G++++A E+ EM +G P+ TYN LI
Sbjct: 317 TFSALIDVFVKEGKLLEAKELY-------------------NEMITRGIAPDTITYNSLI 357
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ L A +F+ M G + VTY LI C R+DDG+++ + E S +G
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR--EISSKG 415
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YN+++ G + + + A E ++M + P V + + G C +G + A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F++M + + IY+ +IH C +V +A L ++ G P T+N ++ GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 422 CRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C++G++ A + ++ED G P Y+ LI+A G S+ L+ +M
Sbjct: 536 CKKGSLSEADMLFRKMKED------GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 479 GILPDYLTWNSLLICLSQQ 497
G D T ++ LS +
Sbjct: 590 GFSADSSTIKMVIDMLSDR 608
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 10/300 (3%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
KV + M + LP +N L S+ T D L M+++GI + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM- 334
+I C ++ +L K G + +++++ G E + EA+ + +M
Sbjct: 110 IMINCYCRKKKLLFAFSVLG--RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
K P V S I G C+ G V +A D+M+E G P+ V Y +++ C+
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHY 452
A +L ++M ++ V+ LC+ G+ AL L E +M+GI + Y
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT----Y 283
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
S LI LC G + + +L +M+G+ I+PD +T+++L+ ++ L L NEM++
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 216/466 (46%), Gaps = 27/466 (5%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L I+N++++ L K+ KK+ S + D +TY ++ G C + + ++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
+ M G +PN+V Y+TLI+ LC +G+V A L+ +M P T + I A C
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG---- 215
+A L + G P+V T T ++ LC G + A+ + G
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 216 ------------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
++K L M R GC PN+ TYN +I YC G A+ V N+M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G S N VTY+T+I+G C G L+IL LM D G K Y ++ G + ++
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG--GCKPDEWSYTELICGFCKISK 510
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ A +M + L P V + I G+C D ++ A + M G PNV Y+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LIH ++ A EL K M G P T+ ++ GLC+ G+ AL++ + I
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN---KMI 627
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+G LP YS LI+AL ++G + A L ++ G++PD +T+
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 228/503 (45%), Gaps = 69/503 (13%)
Query: 61 IDLARAFYRKKMMA-----------SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
I L ++ + K+ MA SG++ + Y+ L+ L H M S
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
GV+PN +IYN +I++LCK+G V A ++M + E P+ T++ +I +C++ +L +
Sbjct: 209 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG------ 219
AL + + G P+ VT + ++ LC GRV +A +++ E G L
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 220 -----GC-----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
GC R +M+ KGC PNV TY LIS C +G+L A+ +F+ M DG+
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDS----------------------------- 300
N VTY+ LI L RI +L LM +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 301 ----KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+ G + YN+++ G AL L M P + I GFC
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+E A F++M+++G PN V Y LI YC++E++ A+ L++ M G P T+
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ GL +Q N A +L + I G P Y+ +I LC+ G A + +
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKV---MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ +G LP+ LT++SL+ L Q+
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQE 648
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 222/509 (43%), Gaps = 64/509 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P+ I+ VI L + + D V M+P + S IL K D+D A
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL------------HV--------- 106
+ +M G + + TY+ L+ GLC + RV + F L+ H
Sbjct: 273 F-NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC 331
Query: 107 --------------MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
MK++G +PN Y LI LC +G + A L M PN V
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 391
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ LI + + A V+L G P++VT ++++ C +G A+ ++
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 209 GEQGRLGK-------VKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G +KG C R L M GC P+ +Y LI +C+ +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+SA +FN+M DG+ N VTY LI G C ++D +L+ M+ S G + + YN
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS--GCRPNVQTYN 569
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++GL ++N A E K M E +FP V + I G C +G+ A F++MIE+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PN++ Y LI A QE +V EA L E+ HG +P T+ ++ G V A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ R I G P Y LIK L
Sbjct: 690 FNFLG---RMIKAGCQPTLWTYGVLIKGL 715
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 163/398 (40%), Gaps = 44/398 (11%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + D+++Y L+ G C +++ F L + M G+ PN V Y LI CK+ K
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A SL+ M+ PN T+++LI K+ N A L + G P+VVT T
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKG 231
+++ LC G A+E+ + EQG L GKV+ E+ER G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL---------- 281
+P+ TY +I +Y +G ++ A + M G TY LI+GL
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725
Query: 282 ----------CS-GGRIDDGLKILQLMEDSKEGSKG-RISPYNSVLYGLYRENQQDEALE 329
CS G + D + + E G + N+++ L + EA E
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 785
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L M + L P + + NV+ A F M +G ++ Y LI A C
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q R +EA + M + P ++ GL R G
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 220/448 (49%), Gaps = 29/448 (6%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+ M GV D TY L+ C V + F+LL+ SRG++P + YN +++ L
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK GK RA+ ++ +M + PN T++ L+ C+ +N++ A + ++ G +PD+
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
V+ + ++ +L G + A+ E G R G + + E
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +GC +V TYN ++ C+ + A +FN+M G+ +F T+ TLIRG C G
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+D L + + M + K YN+++ G + + A E M + + P +
Sbjct: 518 MDKALNLFEAM--VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISY 575
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ GFC G + +A DQM+E+G PN+V + LI YC+ + +A E + +M
Sbjct: 576 GTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKG 463
+G +P + ++NT++ G ++ N+ A L+ E + RG+ + Y+ ++ C +G
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT----YNLILNGFCAEG 691
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A +L +M+ GI PD T++SL+
Sbjct: 692 KMQEAEQVLRKMIEIGINPDGATYSSLI 719
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 33/410 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + + T++ + R I + + D +SR + P L F+S++ VL + +
Sbjct: 360 PNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMH 419
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M SG+ D+ Y IL+ G C + D K+ M +RG + V YNT ++ LCK
Sbjct: 420 FREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCK 479
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A L ++M E P+ TF+ LI YCK+ N+ AL L E PD VT
Sbjct: 480 KKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVT 539
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C G + A E+ + +M RK +P+ +Y +++
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWD-------------------DMIRKDIIPDHISYGTVLN 580
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C +G+L AL++ + M GI N VT +TLI+G C G + + L SK S
Sbjct: 581 GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYL-----SKMIS 635
Query: 305 KGRIS---PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G I YN+++ G +E ++A + +MEK L + +L + GFC +G +++
Sbjct: 636 NGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQE 695
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
A++ +MIE G P+ Y LI+ + ++ ++EA EM G +P
Sbjct: 696 AEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/462 (25%), Positives = 227/462 (49%), Gaps = 31/462 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
D + T+I R ++ + + + S M P L +N+IL L K D A+
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+ + TY L+ +C + + + ++ M RGV P+ V +++LI L +
Sbjct: 351 -IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLAR 409
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + +A +ME P++V ++ILI +C+ L +AL + ++ + G DVVT
Sbjct: 410 NGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEME 228
L LC DA + E E+G + ++G C+ + M
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMV 529
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R P+ TYN LI +C+ G + A ++++DM I + ++Y T++ G CS G +
Sbjct: 530 RTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLP 589
Query: 289 DGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ L + Q++E +G + + N+++ G R +A EYL +M + P + +
Sbjct: 590 EALNLCDQMLE---KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+ + N+E A ++M + G N++ Y+ +++ +C E +++EA +++++M
Sbjct: 647 TLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEI 706
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
G P +T++++++G Q N+ A + +E ++ RG +P
Sbjct: 707 GINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQ---RGLVP 745
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 195/414 (47%), Gaps = 30/414 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +L++ ++ +G + +++ +GV + N L+ L + G V A + ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E N T +I++ A CK+ N + L G D+VT ++ C G V
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A ++L +G ME P + TYN ++ C+ G D A DV
Sbjct: 310 EAFQLLNSFSSRG--------------ME-----PGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+M G++ N TY+TL+ +C I + +I M S+ G + ++S++ L
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM--SRRGVLPDLVSFSSLIGVLA 408
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R +AL + ++ME+ + P V ++ I GFC +G + DA + D+M+ G +VV
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ ++ C+++ +A L EM G +P TF T++ G C+ GN+ AL L E
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R + P Y+ LI C+ G A L M+ K I+PD++++ ++L
Sbjct: 529 VRTNLK---PDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 7/228 (3%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+ YD L+R ++ +G + Q++ ++G I+ N +L GL R D A E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILR--RKGVSVSINACNKLLGGLVRTGWVDLAWEIY 245
Query: 332 KQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
++ + +L I+ C D E+ M +G ++V Y+ LI+AYC+E
Sbjct: 246 GEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCRE 305
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
V EA +L+ + G P T+N +L GLC+ G A ++ E ++ G P +
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQ---LGLTPNA 362
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ L+ +C + A + +M +G+LPD ++++SL+ L++
Sbjct: 363 ATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + TV+ G + ++ + + D + + P+L N+++ + D+ +A+
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSG-DMPKAYE 628
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y KM+++G+ D ++Y L+ G + F L++ M+ RG++ N + YN +++ C
Sbjct: 629 YLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFC 688
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
GK+ A ++ M E P+ T+S LI + ++N+ A ++ G VPD
Sbjct: 689 AEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 351 FCVDGN-VEDAKRCFDQMIEEGGVPNV-----------------VIYDCLIHAYCQEERV 392
F V G + +A+ C +M+ + GV V +IYD L+ Y Q +++
Sbjct: 144 FLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKL 203
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
RE SE + + G + N +L GL R G V A ++ E +RG G
Sbjct: 204 REGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG---GIELNVYTL 260
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ ++ ALC+ F++ L M GKG+ D +T+N+L+
Sbjct: 261 NIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLI 299
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 230/461 (49%), Gaps = 42/461 (9%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYA 85
+ND + + + + P+ FN + + + + DL F K M +G++ D YT
Sbjct: 80 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFC-KGMELNGIEHDMYTMT 138
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
I++ C ++ F +L G +P+++ ++TL++ C G+V A +L+ M E
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ VT S LI C + + ALVL+++ +GF PD VT VL LC G A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+++ ++ME + +V Y+I+I S C+ G D AL +FN+
Sbjct: 259 LDLF-------------------RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 299
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR-----ISPYNSVLY 316
M++ GI + VTY +LI GLC+ G+ DDG K+L+ M GR + +++++
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-------IGRNIIPDVVTFSALID 352
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
+E + EA E +M + P + + I GFC + + +A + FD M+ +G P
Sbjct: 353 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 412
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y LI++YC+ +RV + L +E++ G +P T+NT++ G C+ G + A +L
Sbjct: 413 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 472
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+E + RG P Y L+ LC+ G A + +M
Sbjct: 473 QE---MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 510
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 227/499 (45%), Gaps = 38/499 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD F T++ G +++ V D + P L +++++ L +K + A
Sbjct: 167 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 226
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G Q D+ TY ++ LC + L M+ R +K + V Y+ +I SLC
Sbjct: 227 I-DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G A SL ++ME + + VT+S LI C + + +L + +PDVV
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 345
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++++ G++++A E+ E M +G P+ TYN LI
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNE-------------------MITRGIAPDTITYNSLI 386
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ L A +F+ M G + VTY LI C R+DDG+++ + E S +G
Sbjct: 387 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR--EISSKG 444
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YN+++ G + + + A E ++M + P V + + G C +G + A
Sbjct: 445 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 504
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F++M + + IY+ +IH C +V +A L ++ G P T+N ++ GL
Sbjct: 505 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 564
Query: 422 CRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C++G++ A + ++ED G P Y+ LI+A G S+ L+ +M
Sbjct: 565 CKKGSLSEADMLFRKMKED------GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 618
Query: 479 GILPDYLTWNSLLICLSQQ 497
G D T ++ LS +
Sbjct: 619 GFSADSSTIKMVIDMLSDR 637
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 10/300 (3%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
KV + M + LP +N L S+ T D L M+++GI + T
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM- 334
+I C ++ +L K G + +++++ G E + EA+ + +M
Sbjct: 139 IMINCYCRKKKLLFAFSVLG--RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 196
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
K P V S I G C+ G V +A D+M+E G P+ V Y +++ C+
Sbjct: 197 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 256
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHY 452
A +L ++M ++ V+ LC+ G+ AL L E +M+GI + Y
Sbjct: 257 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT----Y 312
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
S LI LC G + + +L +M+G+ I+PD +T+++L+ ++ L L NEM++
Sbjct: 313 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 372
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 251/531 (47%), Gaps = 40/531 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
V++GL R + + + + R +++P + +N++++ L K +M A+G
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ T LM GLC R+ + +LL MK +G + V+Y TLI C NG + R +
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L +M N VT+S L+ C+ A +L G PDVVT T +++ L
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183
Query: 193 CSVGRV---MDAVEILEESGEQG-------------RLGKVKGGCRFLKEMERKGCLPNV 236
C GR MD + ++ E GE+ + G V + L+ M KG +V
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243
Query: 237 DTYNILISSYCETGVLDSALDVFNDM--KIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
TYN L+ C+ G +D AL +FN M + + N T++ LI GLC GR+ +KI
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFC 352
+ M K+GS G + YN +L G + + EA+E KQ+ L P + S+ I GFC
Sbjct: 304 RKM--VKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+ AK F +M G P + Y+ L+ + C+E + +A L +EM P
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 421
Query: 413 TFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+FNT++ G + G+ + V+E M+ + G P + +S LI L + G A
Sbjct: 422 SFNTMIDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAK 522
L +MV G PD L ++SLL LS + + + ++H+++AK
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSK---------GDTTEIINLLHQMAAK 519
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 212/430 (49%), Gaps = 29/430 (6%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
I++KGLC V + L+ M + V P+ V YNTLI+ LCK K+ A L+ +ME
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN VT + L+ CK+ + A+ LLE GF DVV ++ C+ G +
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 202 VEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
E+ +E +G RLG+ K L M G P+V TY LI
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G A+D+ N M G + VTY+ L+ GLC G + D KIL++M ++G K
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM--IEKGKK 240
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN+++ GL + + DEAL+ M L P ++ I G C +G + A
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +M+++G N+V Y+ L+ + +++EA EL K++ G++P + T++ ++ G
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ + A L E MR G P Y+ L+ +LC++G + A L +M
Sbjct: 361 CKMRMLNIAKGLFCE-MRTHGLN--PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417
Query: 482 PDYLTWNSLL 491
PD +++N+++
Sbjct: 418 PDIISFNTMI 427
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 199/437 (45%), Gaps = 40/437 (9%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGD 80
LG+ + N V+ A ++ + P + + ++D L K+ M+ G +
Sbjct: 151 LGQWKEANTVLNA---MAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 207
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ TY +L+ GLC V D FK+L +M +G K + V YNTL+ LC GKV A L +
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267
Query: 141 DME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
M EPN TF++LI CKE L A+ + K G ++VT +L
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G++ +A+E+ K++ G +PN TY+ILI +C+ +L+
Sbjct: 328 AGKIKEAMELW-------------------KQVLDLGFVPNSFTYSILIDGFCKMRMLNI 368
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A +F +M+ G++ Y+TL+ LC G ++ + Q M ++ + I +N++
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN--CEPDIISFNTM 426
Query: 315 LYGLYRENQQDEALEYLKQMEK------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ G + +++K+++ L P A+ S I G +++AK ++M+
Sbjct: 427 IDGTLKAGD----FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMV 482
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+ ++YD L+ + E L+ +M G + +T+L+ LC
Sbjct: 483 ASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEV 542
Query: 429 TALKLVEEDMRGIGRGS 445
++L+ +G G+
Sbjct: 543 DVMELLPTFFQGTSEGA 559
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 184/405 (45%), Gaps = 32/405 (7%)
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+I++ C+ + A+ L+ + PD+V+ ++ LC ++ +AV +
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGL----- 55
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
L EME GC PN T L+ C+ G +D A+++ MK G
Sbjct: 56 --------------LLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDA 101
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ V Y TLI G C+ G +D G ++ E +G + Y+ +++GL R Q EA
Sbjct: 102 DVVLYGTLISGFCNNGNLDRGKELFD--EMLGKGISANVVTYSCLVHGLCRLGQWKEANT 159
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L M + + P V + I G C DG A + M+E+G P+ V Y+ L+ C
Sbjct: 160 VLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLC 219
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+E V +A ++++ M G T+NT++ GLC +G V ALKL M P
Sbjct: 220 KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS-MFDNENCLEP 278
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-ICLSQQTTWLLLLLL 506
++ LI LC++G A + +MV KG + +T+N LL CL + L
Sbjct: 279 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 338
Query: 507 NEMVSFVMVVHELSAK---EKRCKLRSLNHLAHGAGSVWLGLRIH 548
+++ V + + + CK+R LN +A G ++ +R H
Sbjct: 339 KQVLDLGFVPNSFTYSILIDGFCKMRMLN-IAKG---LFCEMRTH 379
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F T+I G +A V + + + P F+++++ L K ++D A++
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ASG D Y L+KGL + LLH M ++G + I +T++ LC
Sbjct: 478 L-ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 246/522 (47%), Gaps = 45/522 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +IR L R +D + + +N+ LV R
Sbjct: 72 PDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT----LVAGYCRYGRLDA 127
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++AS V D YTY +++GLC RVGD LL M RG +P+ V Y L+ ++C
Sbjct: 128 ARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVC 187
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ G A +++ +M PN VT++++I C+E + +A +L + S+GF PD+V
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIV 247
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ T VL+ LC+ R D V++L EM K C+PN T+++L+
Sbjct: 248 SYTTVLKGLCA-ARRWDDVKVL------------------FAEMVDKKCVPNEVTFDMLV 288
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C G+++ A+ V M G + N + +I +C GR+DD L M G
Sbjct: 289 RFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM--GMYG 346
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
Y +VL GL R + + A E L +M + P V + I C G +E A
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ + M E G +V Y+ L+H +C + RV A EL + P T+ T+L+GL
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 463
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLP-GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C + A +L + G+ + P + ++ L+ C+KG + A L+ QM+ G
Sbjct: 464 CHAERLDAAAEL----LAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 519
Query: 481 LPDYLTWNSLL-----ICLSQQTTWLLLLLLNEMVSFVMVVH 517
P+ +T+N+LL C S++ LL L+++ VS + +
Sbjct: 520 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITY 561
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 234/508 (46%), Gaps = 34/508 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PPD + +IRGL + D + D + + PS+ + +L+ + K
Sbjct: 134 SMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFG 193
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M A G + TY +++ G+C RV D ++L+ + S G +P+ V Y T++
Sbjct: 194 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVL 253
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC + + L ++M + PN+VTF +L+ +C+ + A+ +L++ G
Sbjct: 254 KGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCT 313
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+ V+ +C GRV DA + L G G R G+ +
Sbjct: 314 PNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKEL 373
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L EM RK C PN T+N I C+ G+++ A+ + M G S VTY+ L+ G C
Sbjct: 374 LPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCV 433
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFP-RA 341
GR+D L++ + + Y ++L GL + D A E L M +K P A
Sbjct: 434 QGRVDSALELFNNLP-----CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNA 488
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ + FC G VE+A +QM+E G PN++ ++ L+ ++ EA EL+
Sbjct: 489 VTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHG 548
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKAL 459
+ G T+++V+ L R+ A++++ +DM G P G Y+ ++ AL
Sbjct: 549 LVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM-----GMRPKVGMYNKILFAL 603
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTW 487
C++ A MV G +P+ T+
Sbjct: 604 CKRCETDQAIDFFAYMVSNGCMPNESTY 631
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 199/410 (48%), Gaps = 33/410 (8%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--- 144
++ L + + + +L+ SRG P+ + LI +LC+ G+ A ++ E
Sbjct: 46 LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105
Query: 145 PNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P DV ++ L+ YC+ L A L+ S PD T T ++ LC GRV DA+
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIA---SMPVPPDAYTYTPIIRGLCDRGRVGDALA 162
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L++ M ++GC P+V TY +L+ + C++ A++V ++M+
Sbjct: 163 LLDD-------------------MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMR 203
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G + N VTY+ +I G+C GR+DD +IL + S G + I Y +VL GL +
Sbjct: 204 AKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL--SSYGFQPDIVSYTTVLKGLCAARR 261
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
D+ +M +K P V + + FC G VE A + QM + G PN + +
Sbjct: 262 WDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNI 321
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+I+A C++ RV +A + + M +G P ++ TVL GLCR G A +L+ E +R
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR-- 379
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ P ++ I LC+KG + A L+ M G +T+N+L+
Sbjct: 380 -KNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALV 428
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 198/420 (47%), Gaps = 23/420 (5%)
Query: 9 PDESIFITVIRGLGRARMINDV-VKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + TV++GL AR +DV V ++V + P+ F+ ++ + +
Sbjct: 244 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDMLVRFFCRGGMVERAIQ 302
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M G + I++ +C RV D + L+ M G P+++ Y T++ LC
Sbjct: 303 VLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 362
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+ A+ L+ +M PN+VTF+ IC C++ + A+ L+E +G +V
Sbjct: 363 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV 422
Query: 184 TITKVLELLCSVGRVMDAVEILE----ESGEQGRLGKVKGGCR---------FLKEMERK 230
T ++ C GRV A+E+ E + G C L M +K
Sbjct: 423 TYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQK 482
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C N T+N+L+S +C+ G ++ A+++ N M G + N +T++TL+ G+ ++
Sbjct: 483 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 542
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA-VDRSLKIL 349
L++L + SK S I+ Y+SV+ L RE++ +EA++ L ++ + R V KIL
Sbjct: 543 LELLHGLV-SKGVSLDTIT-YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 600
Query: 350 -GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C + A F M+ G +PN Y LI E ++EA ++ E+ G L
Sbjct: 601 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 156/342 (45%), Gaps = 29/342 (8%)
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
++L A L+E S S G PDV TK++ LC GR DA
Sbjct: 53 DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAA------------------ 94
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
R L+ E G +V YN L++ YC G LD+A + M + ++ TY +IRG
Sbjct: 95 -RVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAY---TYTPIIRG 150
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
LC GR+ D L +L M + G + + Y +L + + + EA+ L +M
Sbjct: 151 LCDRGRVGDALALLDDM--LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 208
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V ++ I G C +G V+DAK +++ G P++V Y ++ C R + L
Sbjct: 209 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 268
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
EM +P TF+ ++ CR G V A++++++ + G P + + +I A
Sbjct: 269 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQ---HGCTPNTTLCNIVINA 325
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+C++G A L M G PD +++ ++L L + W
Sbjct: 326 ICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRW 367
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 25/281 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARA 66
PP+E F T I L + +I +K +L+ + + + +N+++ V+ +D A
Sbjct: 383 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 442
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + + TY L+ GLC R+ +LL M + N+V +N L+
Sbjct: 443 LFNNL----PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFF 498
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ G V A L++ M E PN +TF+ L+ K+ N AL LL S G D
Sbjct: 499 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 558
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR---------FLKE 226
+T + V+++L R +A+++L + G KV C+ F
Sbjct: 559 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 618
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
M GC+PN TY ILI G+L A V +++ G+
Sbjct: 619 MVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 42/245 (17%)
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
LIR LC GR D ++L+ E S G+ + YN++
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEAS--GAPVDVFAYNTL---------------------- 115
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ G+C G ++ A+R M P+ Y +I C RV +A
Sbjct: 116 -----------VAGYCRYGRLDAARRLIASMPVP---PDAYTYTPIIRGLCDRGRVGDAL 161
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
L+ +M G P T+ +L +C+ G A+ +++E MR +G P Y+ +I
Sbjct: 162 ALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDE-MRA--KGCTPNIVTYNVII 218
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-LLLLLLNEMVSFVMV 515
+C +G A +L ++ G PD +++ ++L L W + +L EMV V
Sbjct: 219 NGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCV 278
Query: 516 VHELS 520
+E++
Sbjct: 279 PNEVT 283
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 241/505 (47%), Gaps = 28/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R I++V++ D++ + +L +N ++ L K A
Sbjct: 331 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 390
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+ G + + T+ +L++G C + +G +LL M+ R + P++V Y +I+ LC
Sbjct: 391 LKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 450
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L+ M +PN V +SILI AY E + A LL+ G PD+
Sbjct: 451 CKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFC 510
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L G++ +A L E +G + GK+ ++ EM
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +PN Y +LI+ + + G L AL +F + G+ + T I GL GR+
Sbjct: 571 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQ 630
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ LK+ E ++G + Y+S++ G ++ + ++A E +M + + P +
Sbjct: 631 EALKVFS--ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C G+++ A++ FD M E+G P+ V Y +I YC+ E V EA L EM G
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P + +N ++ G C++G++ A+ L E ++ +L ++ LI C+ Q
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS----FNTLIDGYCKSCKIQ 804
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
AS L +M+ K I+PD++T+ +++
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVI 829
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 242/538 (44%), Gaps = 45/538 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E I+ VI G+ + I++ V+ + + P+ + I L +
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 320
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M +G++ D + L+ G + + ++ VM S G+ N + YN LIH LCK
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 380
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ +A ++ M +PN TF +LI YC+E N+ AL LL++ VP V+
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC + A ++LE +M G PNV Y+ILI
Sbjct: 441 YGAMINGLCHCKDLSLANKLLE-------------------KMTFSGLKPNVVVYSILIM 481
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+Y G ++ A + + M G++ + Y+ +I L G++++ L+E G
Sbjct: 482 AYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTY--LLEIQGRGL 539
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
K + + + G + + EA +Y +M L P ++ I G GN+ +A
Sbjct: 540 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 599
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ G +P+V IH + RV+EA ++ E+ G +P T+++++SG C
Sbjct: 600 IFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFC 659
Query: 423 RQGNVGTALKLVEED-MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+QG V A +L +E ++GI P Y+ L+ LC+ G Q A L M KG+
Sbjct: 660 KQGEVEKAFELHDEMCLKGIA----PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715
Query: 482 PDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
PD +T+++++ C S+ L HE+ +K + N L HG
Sbjct: 716 PDSVTYSTMIDGYCKSENVAEAFSLF-----------HEMPSKGVQPHSFVYNALVHG 762
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 136/575 (23%), Positives = 246/575 (42%), Gaps = 98/575 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ F +I G R + ++ D + + N+ PS + ++++ L +D+ LA
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+KM SG++ + Y+IL+ R+ + +LL M GV P+ YN +I L
Sbjct: 461 L-EKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 519
Query: 128 KNGKVGRARSLMSDME---------------------------------------EPNDV 148
K GK+ A + + +++ PN+
Sbjct: 520 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 579
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+++LI + K NL+ AL + + + G +PDV T + + L GRV +A+++ E
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G + G+V+ EM KG PN+ YN L+ C++G +
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A +F+ M G+ + VTY T+I G C + + + M +G + YN
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM--PSKGVQPHSFVYN 757
Query: 313 SVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++++G +E ++A+ ++M +K F + + I G+C +++A + F +MI +
Sbjct: 758 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 817
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEM----------------------------- 402
+P+ V Y +I +C+ ++ EA+ L KEM
Sbjct: 818 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 877
Query: 403 ------TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
G P T+ V+ C++ N+ A KL +E +G+G L + LI
Sbjct: 878 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE---VVGKGMLTKGTIHDLLI 934
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
ALC++ AS LL +M G+ P N+L+
Sbjct: 935 TALCKREDLTEASKLLDEMGELGLKPSLAACNTLV 969
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 236/538 (43%), Gaps = 66/538 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR--K 70
+F +I R M+++ + ++ SL NS+L L+K + F++
Sbjct: 160 VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLK--CGMMELFWKVYN 217
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
M+ + + D YTY L+ LC T + ++L M +G+ PN IY+ +I +C+ G
Sbjct: 218 GMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD----- 181
+ A L M E PN T++I+ C+ + + A + E+ G PD
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337
Query: 182 ------------------------------VVTITKVLELLCSVGRVMDAVEILE----- 206
++T ++ LC G++ A EIL+
Sbjct: 338 ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTL 397
Query: 207 --ESGEQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
+ + ++G CR L EME++ +P+ +Y +I+ C L A
Sbjct: 398 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 457
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ M G+ N V Y LI S GRI++ ++L M S G I YN+++
Sbjct: 458 NKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM--SCSGVAPDIFCYNAII 515
Query: 316 YGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
L + + +EA YL +++ L P AV ILG+ G + +A + FD+M++ G +
Sbjct: 516 SCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLM 575
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN +Y LI+ + + + EA + + + G LP T + + GL + G V ALK+
Sbjct: 576 PNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 635
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E +G +P YS LI C++G + A L +M KGI P+ +N+L+
Sbjct: 636 FSELKE---KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 690
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 141/298 (47%), Gaps = 13/298 (4%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ G ++G R L EM+ KG PN Y+++I C+ G +D A+++ M G+ N
Sbjct: 240 KTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTY 299
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY + GLC R+++ + M+ K G K + ++++ G RE DE L
Sbjct: 300 TYTIITAGLCRAKRMNEAKLTFEEMQ--KTGLKPDYNACSALIDGFMREGDIDEVLRIKD 357
Query: 333 QMEKL-FP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
M P + ++ I G C G +E A M+ G PN + LI YC+E
Sbjct: 358 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREH 417
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ A EL+ EM +P A ++ +++GLC ++ A KL+E + G P
Sbjct: 418 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE---KMTFSGLKPNVV 474
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS------QQTTWLL 502
YS LI A +G + A LL M G+ PD +N+++ CLS + +T+LL
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 532
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 180/423 (42%), Gaps = 60/423 (14%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLK--------------- 47
H++ PD I GL + + + +K + + P +
Sbjct: 605 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 664
Query: 48 --------------------IFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAI 86
I+N+++D L K DI AR + M G++ D TY+
Sbjct: 665 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF-DGMPEKGLEPDSVTYST 723
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ G C + V + F L H M S+GV+P+S +YN L+H CK G + +A +L +M +
Sbjct: 724 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
++F+ LI YCK + A L ++ + +PD VT T V++ C G++ +A
Sbjct: 784 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843
Query: 204 ILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ +E E+ +LG+ ++M KG P+ TY ++I ++C
Sbjct: 844 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ L A + +++ G+ +D LI LC + + K+L M + G K
Sbjct: 904 KEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM--GELGLKPS 961
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
++ N+++ + + DEA + ++ L P + G D + EDA+
Sbjct: 962 LAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIK 1021
Query: 366 QMI 368
Q++
Sbjct: 1022 QLV 1024
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 208/419 (49%), Gaps = 32/419 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ ++ + KLL M+ RG PN V YN L+ +LCK VG A+ ++ M
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
E PN +TF+ L+ +CK N+ +A LL + G P+VVT + +++ LC +
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178
Query: 199 MDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
++A E+LEE G + K++ + L+ M GC P+V Y+ +
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I ++C++G L A +M+ S + VTY+T+I GLC G+I + IL M++S
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES-- 296
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGN 356
G + P Y++V+ GL + + EA + L +M K P V + I G C G
Sbjct: 297 ---GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 353
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E+A+ M G PNVV Y LI C+ +V EA +M+EM G P T+NT
Sbjct: 354 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 413
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++GLC G + A +LV+ G S P + Y ++ AL Q A LL QM
Sbjct: 414 MVNGLCVSGRIKEAQQLVQRMKDGRAECS-PDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 217/444 (48%), Gaps = 32/444 (7%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
S+ P+ + +I RA+ + + +K + + P+L +N ++D L K +
Sbjct: 49 RSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMV 108
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A KKM+ G + T+ L+ G C V D KLL +M ++G++PN V Y+ L
Sbjct: 109 GAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSAL 168
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I LCK+ K A+ ++ +M+ P+ T+S LI CK + + A +L + G
Sbjct: 169 IDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGC 228
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PDVV + ++ C G++++A + L+E +Q RK P+V T
Sbjct: 229 TPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQ-----------------RKS--PDVVT 269
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDG-ISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
YN +I C+ G + A + + M+ G + + VTY T+I GLC + + K+L M
Sbjct: 270 YNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVD 354
K G + Y +++ GL + + +EA EYL Q K P V + I G C
Sbjct: 330 --CKAGCNPDVVTYTTIIDGLCKCGRLEEA-EYLLQGMKRAGCAPNVVTYTTLISGLCKA 386
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT-GHGYL-PIAS 412
V++A+R ++M G PN+V Y+ +++ C R++EA +L++ M G P A+
Sbjct: 387 RKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAA 446
Query: 413 TFNTVLSGLCRQGNVGTALKLVEE 436
T+ T+++ L V A +L+E+
Sbjct: 447 TYRTIVNALMSSDLVQEAEQLLEQ 470
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 213/436 (48%), Gaps = 38/436 (8%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M ++G D +T+ ++ + GD + ++S G PN V Y LI + +
Sbjct: 14 EEMKSAGFAPDAFTHTPIITAMA---NAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARA 70
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
K+ A L+ +M E PN VT+++L+ A CK + A +++K GF P+V+T
Sbjct: 71 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTF 130
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ C G V DA + L M KG PNV TY+ LI
Sbjct: 131 NSLVDGFCKRGNVDDAR-------------------KLLGIMVAKGMRPNVVTYSALIDG 171
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C++ A +V +MK G++ + TY LI GLC +I++ ++L+ M S G
Sbjct: 172 LCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS--GCT 229
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+S+++ + + EA + L++M K P V + I G C G + +A+
Sbjct: 230 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVI 289
Query: 364 FDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
DQM E G V P+VV Y +I+ C+ + + EA +L+ M G P T+ T++ GLC
Sbjct: 290 LDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLC 349
Query: 423 RQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ G + A L ++G+ R G P Y+ LI LC+ A ++ +M G
Sbjct: 350 KCGRLEEAEYL----LQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCP 405
Query: 482 PDYLTWNSLL--ICLS 495
P+ +T+N+++ +C+S
Sbjct: 406 PNLVTYNTMVNGLCVS 421
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 182/349 (52%), Gaps = 19/349 (5%)
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ------ 211
C +L AL LLE+ S GF PD T T ++ + + G + A++ L G
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTY 60
Query: 212 -------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
R K++ + L+EM +GC PN+ TYN+L+ + C+ ++ +A DV M
Sbjct: 61 TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + N +T+++L+ G C G +DD K+L +M +G + + Y++++ GL + +
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIM--VAKGMRPNVVTYSALIDGLCKSQKF 178
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
EA E L++M+ + P A S I G C +E+A++ +M G P+VV+Y +
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
IHA+C+ ++ EA + ++EM P T+NTV+ GLC+ G + A +++ + M+ G
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEA-QVILDQMQESG 297
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP YS +I LC+ A LL +M G PD +T+ +++
Sbjct: 298 -DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTII 345
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 182/347 (52%), Gaps = 21/347 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +++ G + ++D K ++ M P++ +++++D L K L
Sbjct: 125 PNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEV 184
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M ASGV D +TY+ L+ GLC +++ + ++L M G P+ V+Y+++IH+ CK
Sbjct: 185 LEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVV 183
+GK+ A+ + +M + P+ VT++ +I CK + A V+L++ G V PDVV
Sbjct: 245 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVV 304
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + V+ LC +++A ++L+ + G + G+++ L+ M
Sbjct: 305 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 364
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+R GC PNV TY LIS C+ +D A V +M+ G N VTY+T++ GLC GRI
Sbjct: 365 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 424
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ +++Q M+D + + Y +++ L + EA + L+QM
Sbjct: 425 KEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
ALE L++M+ P A + I G+++ A D + G PNVV Y LI
Sbjct: 9 ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIA 65
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
A+ + +++ EA +L++EM G P T+N ++ LC+ VG A +V++ + G G
Sbjct: 66 AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEG---G 122
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
P ++ L+ C++G A LL MV KG+ P+ +T+++L+ +C SQ+
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 216/466 (46%), Gaps = 27/466 (5%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L I+N++++ L K+ KK+ S + D +TY ++ G C + + ++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
+ M G +PN+V Y+TLI+ LC +G+V A L+ +M P T + I A C
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG---- 215
+A L + G P+V T T ++ LC G + A+ + G
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392
Query: 216 ------------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
++K L M R GC PN+ TYN +I YC G A+ V N+M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G S N VTY+T+I+G C G L+IL LM D G K Y ++ G + ++
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG--GCKPDEWSYTELICGFCKISK 510
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ A +M + L P V + I G+C D ++ A + M G PNV Y+
Sbjct: 511 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 570
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LIH ++ A EL K M G P T+ ++ GLC+ G+ AL++ + I
Sbjct: 571 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN---KMI 627
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+G LP YS LI+AL ++G + A L ++ G++PD +T+
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 228/503 (45%), Gaps = 69/503 (13%)
Query: 61 IDLARAFYRKKMMA-----------SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
I L ++ + K+ MA SG++ + Y+ L+ L H M S
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
GV+PN +IYN +I++LCK+G V A ++M + E P+ T++ +I +C++ +L +
Sbjct: 209 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG------ 219
AL + + G P+ VT + ++ LC GRV +A +++ E G L
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328
Query: 220 -----GC-----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
GC R +M+ KGC PNV TY LIS C +G+L A+ +F+ M DG+
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFP 388
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDS----------------------------- 300
N VTY+ LI L RI +L LM +
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448
Query: 301 ----KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+ G + YN+++ G AL L M P + I GFC
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+E A F++M+++G PN V Y LI YC++E++ A+ L++ M G P T+
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 568
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ GL +Q N A +L + I G P Y+ +I LC+ G A + +
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKV---MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 625
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ +G LP+ LT++SL+ L Q+
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQE 648
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 222/509 (43%), Gaps = 64/509 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P+ I+ VI L + + D V M+P + S IL K D+D A
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL------------HV--------- 106
+ +M G + + TY+ L+ GLC + RV + F L+ H
Sbjct: 273 F-NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC 331
Query: 107 --------------MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
MK++G +PN Y LI LC +G + A L M PN V
Sbjct: 332 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTV 391
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ LI + + A V+L G P++VT ++++ C +G A+ ++
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451
Query: 209 GEQGRLGK-------VKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G +KG C R L M GC P+ +Y LI +C+ +
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+SA +FN+M DG+ N VTY LI G C ++D +L+ M+ S G + + YN
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS--GCRPNVQTYN 569
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++GL ++N A E K M E +FP V + I G C +G+ A F++MIE+
Sbjct: 570 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 629
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PN++ Y LI A QE +V EA L E+ HG +P T+ ++ G V A
Sbjct: 630 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ R I G P Y LIK L
Sbjct: 690 FNFLG---RMIKAGCQPTLWTYGVLIKGL 715
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 163/398 (40%), Gaps = 44/398 (11%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + D+++Y L+ G C +++ F L + M G+ PN V Y LI CK+ K
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A SL+ M+ PN T+++LI K+ N A L + G P+VVT T
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKG 231
+++ LC G A+E+ + EQG L GKV+ E+ER G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL---------- 281
+P+ TY +I +Y +G ++ A + M G TY LI+GL
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 725
Query: 282 ----------CS-GGRIDDGLKILQLMEDSKEGSKG-RISPYNSVLYGLYRENQQDEALE 329
CS G + D + + E G + N+++ L + EA E
Sbjct: 726 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 785
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L M + L P + + NV+ A F M +G ++ Y LI A C
Sbjct: 786 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 845
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q R +EA + M + P ++ GL R G
Sbjct: 846 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 883
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 144/516 (27%), Positives = 244/516 (47%), Gaps = 63/516 (12%)
Query: 37 VSRFNMTPSLKIFNSILDVLV----KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+ R ++ P+L N+++ LV K + L++A + ++ GV+ + T+ IL+ G C
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIF-SDVIKLGVEVNTNTFNILICGCC 59
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
+ N++ + L+ MK P++V YNT++ LCK GK+ AR L+ DM+ PN
Sbjct: 60 IENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRN 119
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
TF+IL+ YCK L A +++ +PDV T T ++ LC G++ +A + +E
Sbjct: 120 TFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEM 179
Query: 209 GEQGRLGKVK------GGC----------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
L V GC + EME KG PN TYN+++ Y + G +
Sbjct: 180 ENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKM 239
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D+A + M+ G S + VT++TL G C GR+ + +++ M S++G K N
Sbjct: 240 DNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEM--SRKGLKMNSVTLN 297
Query: 313 SVLYGLYRENQQDEALEYLKQMEK---------------------------------LFP 339
++L+ L E + D+A + L K + P
Sbjct: 298 TILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIP 357
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ I G C G + + ++++E G VP+ Y+ +I YC+E +V +A
Sbjct: 358 SIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFR 417
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+M + P T N ++ GLC +G + ALKL + I +G + ++ +I L
Sbjct: 418 NKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFK---TWISKGKAIDAVTFNTIISGL 474
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
CE+G F+ A LL +M K + PD T N++L L+
Sbjct: 475 CEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALA 510
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 236/515 (45%), Gaps = 63/515 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + F ++ G + + + + D+++R N+ P ++ + +++ L K D + AF
Sbjct: 116 PNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCK-DGKIDEAFR 174
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R +M + TY +L+ G + GF+L+ M+ +GVKPN+V YN ++
Sbjct: 175 LRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYV 234
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A + + MEE P+ VTF+ L YCK L A ++++ G + V
Sbjct: 235 KEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSV 294
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T+ +L LC ++ DA ++L + ++G F+ E+ +Y LI
Sbjct: 295 TLNTILHTLCGERKLDDAYKLLSSASKRGY---------FVDEV----------SYGTLI 335
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKE 302
Y + G +++MK I + +TY T+I GLC G+ D + K +L+E
Sbjct: 336 MGYFKVG----KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLES--- 388
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+++ G RE Q D+A + +M K P ++ + G C +G ++ A
Sbjct: 389 GLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKA 448
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F I +G + V ++ +I C+E R EA +L+ EM P T N +LS
Sbjct: 449 LKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSA 508
Query: 421 LCRQGNVGTALKLVEEDMRGI-GRGSL-----------------------PGSGHYSPLI 456
L G +K EE M GI +G L P S +S I
Sbjct: 509 LADAGR----MKEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQI 564
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC +G ++ A ++ + KGI+ T+ SL+
Sbjct: 565 NELCTQGKYKDAMHMIQESTQKGIILHKSTYISLM 599
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/403 (29%), Positives = 196/403 (48%), Gaps = 39/403 (9%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCK---NGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
MK +KPN + NTLI +L + V ++++ SD+ E N TF+ILIC C
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
E L A+ L+ K F PD V+ +L++LC G++ +A ++L
Sbjct: 61 ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLL-------------- 106
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+M+ G PN +T+NIL+S YC+ G L A +V + M + + + TY TLI
Sbjct: 107 -----LDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIG 161
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KL 337
GLC G+ID+ ++ ME+ K + YN ++ G + + + E + +ME +
Sbjct: 162 GLCKDGKIDEAFRLRDEMENLK--LLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGV 219
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P AV ++ + + +G +++A +M E G P+ V ++ L + YC+ R+ EA
Sbjct: 220 KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFR 279
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+M EM+ G + T NT+L LC + + A KL+ + RG Y LI
Sbjct: 280 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK---RGYFVDEVSYGTLIM 336
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
+ G S +M K I+P +T+ +++ +C S +T
Sbjct: 337 GYFKVG----KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKT 375
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 180/409 (44%), Gaps = 52/409 (12%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P+ +N ++ VKE +D A RK M SG D T+ L G C R+ + F+
Sbjct: 221 PNAVTYNVVVKWYVKEGKMDNAGNELRK-MEESGFSPDCVTFNTLSNGYCKAGRLSEAFR 279
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYC 158
++ M +G+K NSV NT++H+LC K+ A L+S + ++V++ LI Y
Sbjct: 280 MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF 339
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K + EK +P ++T ++ LC G+ +++ E E G
Sbjct: 340 KVGKSXXWDEMKEKEI----IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQT 395
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R G+V F +M +K P++ T NIL+ C G+LD AL +F
Sbjct: 396 TYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTW 455
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + + VT++T+I GLC GR ++ +L ME+ K G +N++L L
Sbjct: 456 ISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPD--CYTHNAILSALADAG 513
Query: 323 QQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA-------KRCFDQMIEEGGVPN 375
+ EA E++ G G ++D K + PN
Sbjct: 514 RMKEAEEFMS-----------------GIVEQGKLQDQTISLNKRKTESSSETSQESDPN 556
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
V + I+ C + + ++A +++E T G + ST+ +++ GL ++
Sbjct: 557 SVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/439 (32%), Positives = 215/439 (48%), Gaps = 43/439 (9%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G C + R+ D L+ M V P++ YNT++ LC + A +LM++M
Sbjct: 182 TYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
PN+VTF+ I A+C+ L A+ LL++ +G PDVV + ++ GRV
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298
Query: 199 MDAVEILEESGEQGRLGK---------VKGGC---------RFLKEMERKGCLPNVDTYN 240
DA+E+L G L K +KG C + + EM RK CLPN T++
Sbjct: 299 DDAIELL-----NGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFS 353
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+L S C+ G++D A++V M G + V Y+TLI GR+DD LK+L M S
Sbjct: 354 MLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCS 413
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVE 358
+ + +N+ L GL R + D+A E + QM + ++ + IL C +G V
Sbjct: 414 PD-----VISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVN 468
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A F+QM + G P++V Y LI+ ++ V A EL + M P +N VL
Sbjct: 469 NAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK---PDIFGYNAVL 525
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GLCR A +L+ R + P ++ LI +LC+KG A + QM
Sbjct: 526 KGLCRAARWEDAGELISNMAR---KDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKY 582
Query: 479 GILPDYLTWNSLLICLSQQ 497
G PD T+N+L+ S+Q
Sbjct: 583 GSTPDIFTYNALINGFSEQ 601
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 196/418 (46%), Gaps = 41/418 (9%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG---RARSLMSDM 142
IL+K LC R+ D ++L +K+ G + V +NTL+ C++G++ R +
Sbjct: 117 ILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYCRDGRLADAERLLAAAGLS 175
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
N VT++ LI YC+ L +AL L+ S PD T VL LC + DA
Sbjct: 176 GAANVVTYTTLINGYCRSGRLADALALIA---SMPVAPDTYTYNTVLMGLCGARQWEDAE 232
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++ EM R C PN T+ I ++C+ G+LD A+ + + M
Sbjct: 233 ALM-------------------AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRM 273
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + + V Y TL+ G GR+DD +++L M K YN+ L GL
Sbjct: 274 PQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML-----CKPNTICYNAALKGLCIAQ 328
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ ++ + + +M + P S+ C +G V+ A +QM + G P+ VIY+
Sbjct: 329 RWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYN 388
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI+++ ++ RV +A +L+ M P +FN L GLCR A +L+ + +
Sbjct: 389 TLIYSFSEQGRVDDALKLLNSMPCS---PDVISFNAALKGLCRAERWDDAEELIVQML-- 443
Query: 441 IGRGSLP-GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
R P ++ LI +LC+ G +A + QM G PD +T++SL+ LS+Q
Sbjct: 444 --REDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQ 499
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 179/411 (43%), Gaps = 86/411 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
PP+E F T IR + +++ V+ D + ++ TP + I++++++ V + I+
Sbjct: 244 PPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIE 303
Query: 63 LARAFYRK---------------------------KMMASGVQGDDYTYAILMKGLCLTN 95
L K +M+ ++ T+++L LC
Sbjct: 304 LLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNG 363
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV------- 148
V ++L M G +P++VIYNTLI+S + G+V A L++ M DV
Sbjct: 364 LVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAAL 423
Query: 149 -----------------------------TFSILICAYCKEENLVNALVLLEKSFSFGFV 179
TF+ILI + C+ + NA+ + E+ +G
Sbjct: 424 KGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCT 483
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQ----GRLGKVKGGCR---------FLKE 226
PD+VT + ++ L G V A+E+ + + G +KG CR +
Sbjct: 484 PDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISN 543
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M RK C PN T+NILI+S C+ G++D A++VF M G + + TY+ LI G GR
Sbjct: 544 MARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGR 603
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+DD ++L M K YNS L GL R + EA E + +M ++
Sbjct: 604 LDDARRLLSTM-----SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRM 649
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/424 (30%), Positives = 218/424 (51%), Gaps = 32/424 (7%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
+GFK L M RG P+ + +LI LCK GK +A +M +E+ P+ +T+++LI
Sbjct: 128 EGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLI 187
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-- 212
YCK + +AL LL++ PDVVT +L LC G++ +A+E+L+ ++
Sbjct: 188 SGYCKTGEIGSALQLLDR---MSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECY 244
Query: 213 --------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ V + L EM KGC P+V TYN+LI+ C+ G LD A+
Sbjct: 245 PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRF 304
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
N M G N +T++ ++R +CS GR D K L M ++G + +N ++ L
Sbjct: 305 LNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEM--IRKGCSPSVVTFNILINFL 362
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R+ A++ L++M + P ++ + + C D +E A D M+ G P++
Sbjct: 363 CRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDI 422
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y+ L+ A C++ +V A E++ ++ G P+ T+NTV+ GL + G A+KL++E
Sbjct: 423 VTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDE 482
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICL 494
M+ G+G P YS L+ L +G A + G+ P+ +T+NS++ +C
Sbjct: 483 -MK--GKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCK 539
Query: 495 SQQT 498
++QT
Sbjct: 540 ARQT 543
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 227/479 (47%), Gaps = 33/479 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD ++IRGL + + +++ P + +N ++ K ++ A
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTG-EIGSALQ 201
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ V D TY +++ LC + ++ + ++L R P+ + Y LI + CK
Sbjct: 202 LLDRMS--VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCK 259
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
VG+A L+ +M + P+ VT+++LI CKE L A+ L S+G P+V+T
Sbjct: 260 ESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVIT 319
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+L +CS GR MDA +FL EM RKGC P+V T+NILI+
Sbjct: 320 HNIILRSMCSTGRWMDAE-------------------KFLAEMIRKGCSPSVVTFNILIN 360
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C G++ A+DV M G + N ++Y+ L+ LC +++ ++ L +M G
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM--VSRGC 418
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN++L L ++ + D A+E L Q+ + P + + I G G +DA +
Sbjct: 419 YPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIK 478
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
D+M +G P+++ Y L+ +E +V EA ++ G P A T+N+++ GLC
Sbjct: 479 LLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLC 538
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ A+ + + RG P Y LI+ L +G + A LL ++ +G++
Sbjct: 539 KARQTVRAIDFLA---YMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 211/437 (48%), Gaps = 37/437 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + +I G + ++ A L+ R +++P + +N+IL L +KE +++
Sbjct: 178 PDVITYNVLISGYCKT---GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEV 234
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ M D TY IL++ C + VG KLL M+ +G KP+ V YN LI
Sbjct: 235 L-----DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 289
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ +CK G++ A ++ M +PN +T +I++ + C ++A L + G
Sbjct: 290 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 349
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P VVT ++ LC G + A+++LE+ + G + K++ +
Sbjct: 350 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 409
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L M +GC P++ TYN L+++ C+ G +D A+++ N + G S +TY+T+I GL
Sbjct: 410 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRA 341
G+ DD +K+L M+ +G K I Y++++ GL RE + DEA+ + +E++ P A
Sbjct: 470 VGKTDDAIKLLDEMKG--KGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNA 527
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + +LG C A M+ G P Y LI E +EA EL+ E
Sbjct: 528 ITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNE 587
Query: 402 MTGHGYLPIASTFNTVL 418
+ G + +S V+
Sbjct: 588 LCSRGVVKKSSAEQVVV 604
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 174/336 (51%), Gaps = 36/336 (10%)
Query: 170 LEKSFSF-------GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
LE+ F F G +PD++ T ++ LC G+ A ++E
Sbjct: 126 LEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVME---------------- 169
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+E G +P+V TYN+LIS YC+TG + SAL + + M +S + VTY+T++R LC
Sbjct: 170 ---ILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLC 223
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
G++ + +++L + +E I+ Y ++ +E+ +A++ L +M + P
Sbjct: 224 DSGKLKEAMEVLD-RQMQRECYPDVIT-YTILIEATCKESGVGQAMKLLDEMRDKGCKPD 281
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ I G C +G +++A R + M G PNV+ ++ ++ + C R +A + +
Sbjct: 282 VVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLA 341
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM G P TFN +++ LCR+G +G A+ ++E+ + G P S Y+PL+ ALC
Sbjct: 342 EMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ---HGCTPNSLSYNPLLHALC 398
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ + A L MV +G PD +T+N+LL L +
Sbjct: 399 KDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCK 434
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 246/505 (48%), Gaps = 29/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P F +++ GL +AR I + + + P ++ I D L+K D A
Sbjct: 169 PSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALD 228
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
YR+ + GV+ D+YT +IL+ GLC +V ++L + G+ P VIYNT+++
Sbjct: 229 LYREAI-GKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGY 287
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ G + RA + ME PN + F+ +I +C+ + + A ++K G P V
Sbjct: 288 CQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSV 347
Query: 183 VTITKVLE---LLCSVGRVMDAVEILEESGEQGRL-------------GKVKGGCRFLKE 226
T +++ LC R +E +EE+GE+ + GK+ L++
Sbjct: 348 ETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRD 407
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G LPN + YN+LI C G L AL F++M +GI VTY++LI+GLC G+
Sbjct: 408 MVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGK 467
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPRAVDRS 345
+ + ++ L+ + G + YNS++ G + LE + M+KL ++
Sbjct: 468 LKEAEEMFFLITST--GHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
++ C ++ + F++M++ P+ V+Y+ +IH Y + V++A L KEM
Sbjct: 526 HPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+N+++ G ++G + LV +DM+ +G +P + YS LI+ C+ F
Sbjct: 586 GVRPDNKTYNSLILGHLKEGKLSETKDLV-DDMK--AKGLIPEADTYSLLIQGHCDLKDF 642
Query: 466 QSASMLLVQMVGKGILPDYLTWNSL 490
A + +M+ G LP+ N L
Sbjct: 643 NGAYVWYREMLENGFLPNVCICNEL 667
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 224/496 (45%), Gaps = 67/496 (13%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+ LA + + M V + + Y +L+ GLC R+ D KL M R + PN V +
Sbjct: 81 DLKLAMELF-ETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NTLI CK G+V A L M+ EP+ +TF+ L+ CK + A +L +
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199
Query: 176 FGFVPDVVTITKV------------------------------------LELLCSVGRVM 199
GFVPD T + + L LC G+V
Sbjct: 200 NGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259
Query: 200 DAVEILEESGEQGRLGK-------VKGGCRF---------LKEMERKGCLPNVDTYNILI 243
A E+L+ E G + V G C+ +++ME +G PN +N +I
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE- 302
+CE ++D A + M GI+ + TY+ LI G GR+ + Q++E+ +E
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGY---GRLCVFSRCFQILEEMEEN 376
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G K + Y S++ L ++ + EA L+ M + P A ++ I G C G + +A
Sbjct: 377 GEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREA 436
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R FD+M + G +V Y+ LI C+ +++EA E+ +T G+ P T+N+++SG
Sbjct: 437 LRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISG 496
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
GN L+L E M+ +G P + PLI C K G + L +M+ +
Sbjct: 497 YSNAGNSQKCLELYE-TMKKLGLK--PTINTFHPLISG-CSKEGIKLKETLFNEMLQMNL 552
Query: 481 LPDYLTWNSLLICLSQ 496
PD + +N+++ C +
Sbjct: 553 SPDRVVYNAMIHCYQE 568
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 234/493 (47%), Gaps = 36/493 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ F T+I G +A ++ + + + + + PS+ FNS+L L K I+ AR
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNR-VGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + +G D +TY+I+ GL ++ G L +GVK ++ + L++ L
Sbjct: 194 LNE-IKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGL 252
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK GKV +A ++ + E P +V ++ ++ YC+ ++ A++ +E+ S G P+
Sbjct: 253 CKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNC 312
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ V++ C + +++D E ++K+M KG P+V+TYNIL
Sbjct: 313 IAFNSVIDKFCEM-QMIDKAE------------------EWVKKMVGKGIAPSVETYNIL 353
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I Y V + +M+ +G N ++Y +LI LC G+I + +L+ M
Sbjct: 354 IDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDM--VGR 411
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + YN ++ G + EAL + +M K + V + I G C G +++A
Sbjct: 412 GVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEA 471
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F + G P+V+ Y+ LI Y ++ EL + M G P +TF+ ++SG
Sbjct: 472 EEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG 531
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
++G +KL E + + +L P Y+ +I E G Q A L +MV G
Sbjct: 532 CSKEG-----IKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMG 586
Query: 480 ILPDYLTWNSLLI 492
+ PD T+NSL++
Sbjct: 587 VRPDNKTYNSLIL 599
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 197/425 (46%), Gaps = 35/425 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P E I+ T++ G + ++ + + + + P+ FNS++D + + ID A +
Sbjct: 275 PGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEW 334
Query: 68 YRKKMMASGVQGDDYTYAILMKG---LCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
KKM+ G+ TY IL+ G LC+ +R F++L M+ G KPN + Y +LI+
Sbjct: 335 V-KKMVGKGIAPSVETYNILIDGYGRLCVFSRC---FQILEEMEENGEKPNVISYGSLIN 390
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK+GK+ A ++ DM PN +++LI C L AL ++ G
Sbjct: 391 CLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA 450
Query: 181 DVVTITKVLELLCSVGRVMDAVE---ILEESGE-------------QGRLGKVKGGCRFL 224
+VT +++ LC +G++ +A E ++ +G G +
Sbjct: 451 TIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELY 510
Query: 225 KEMERKGCLPNVDTYNILISSYCETGV-LDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ M++ G P ++T++ LIS + G+ L L FN+M +S + V Y+ +I
Sbjct: 511 ETMKKLGLKPTINTFHPLISGCSKEGIKLKETL--FNEMLQMNLSPDRVVYNAMIHCYQE 568
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
G + + + M D G + YNS++ G +E + E + + M+ L P A
Sbjct: 569 TGHVQKAFSLQKEMVDM--GVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEA 626
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
SL I G C + A + +M+E G +PNV I + L ++ R++EA + E
Sbjct: 627 DTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSE 686
Query: 402 MTGHG 406
M +G
Sbjct: 687 MIANG 691
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 164/400 (41%), Gaps = 97/400 (24%)
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
N L L ++ GF PD + GR M A +LG +K
Sbjct: 49 NVLDLFKEMVGLGFRPDKLV----------YGRAMLAAV---------KLGDLKLAMELF 89
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ M+R+ +PNV YN+LI C+ + A +F +M + + N VT++TLI G C
Sbjct: 90 ETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKA 149
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--------- 335
G +D + + + M+ KE + I +NS+L GL + + +EA L +++
Sbjct: 150 GEVDVAIGLRERMK--KEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGF 207
Query: 336 --------------------KLFPRAVDRSLKI---------LGFCVDGNVEDAKRCFDQ 366
L+ A+ + +KI G C +G VE A+
Sbjct: 208 TYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKS 267
Query: 367 MIEEGGVPNVVIYDCLIHAYCQ--------------EER--------------------- 391
++E G VP VIY+ +++ YCQ E R
Sbjct: 268 LVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQM 327
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ +A E +K+M G G P T+N ++ G R +++EE G P
Sbjct: 328 IDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEE---NGEKPNVIS 384
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y LI LC+ G A M+L MVG+G+LP+ +N L+
Sbjct: 385 YGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLI 424
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 304 SKGRISPYNSV---LYGLYRENQQDEALEYLKQMEKL--------FPRAVDRSLKILGFC 352
+GR+ + V + L + D L+ K+M L + RA+ ++K+
Sbjct: 24 QEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKL---- 79
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G+++ A F+ M VPNV +Y+ LI C+E+R+R+A +L EM+ +P
Sbjct: 80 --GDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
TFNT++ G C+ G V A+ L E R P ++ L+ LC+ + A +L
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRE---RMKKEKVEPSIITFNSLLSGLCKARRIEEARCML 194
Query: 473 VQMVGKGILPDYLTWN 488
++ G +PD T++
Sbjct: 195 NEIKCNGFVPDGFTYS 210
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 24/258 (9%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ ++I+GL + + + + L++ P + +NS++ + M
Sbjct: 455 YNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMK 514
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G++ T+ L+ G C + L + M + P+ V+YN +IH + G V
Sbjct: 515 KLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQ 573
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A SL +M + P++ T++ LI + KE L L++ + G +P+ T + ++
Sbjct: 574 KAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLI 633
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ C L G + +EM G LPNV N L + +
Sbjct: 634 QGHCD-------------------LKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKD 674
Query: 250 GVLDSALDVFNDMKIDGI 267
G L A + ++M +G+
Sbjct: 675 GRLQEAQSICSEMIANGM 692
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/503 (27%), Positives = 246/503 (48%), Gaps = 42/503 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
D + T+I+GL I++ + + P + +++ L + +I++A +
Sbjct: 381 DIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLH 440
Query: 69 RKKMMASGVQGDD-----YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++ + +G G +Y+I++ GLC R + +L MK++G+ P+ + Y TLI
Sbjct: 441 QEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLI 500
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H C +GK +A+ L ++M +P+ T S+LI CK+ ++ A LLE G +
Sbjct: 501 HGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI 560
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
DVVT T +++ LC R+ A ++ FLK M++ GC+PNV T
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQL------------------FLK-MQKLGCMPNVVTC 601
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISW------NFVTYDTLIRGLCSGGRIDDGLKI 293
L+ C++G + AL++ +M D + N ++Y +I GLC GR D+ ++
Sbjct: 602 ATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGF 351
+ M+ G + Y S+++G R + +A +M + P S+ I
Sbjct: 662 FKEMK--ALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 719
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +G V +A + MI+ G +PN V Y L+ C +R+ EA++L +M G LP
Sbjct: 720 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 779
Query: 412 STFNTVLSGLCRQGNVGTALKLVEE---DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
T+ T++ GLC+ GN+ TAL+L ++ D G P YS +I LC+ G A
Sbjct: 780 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEA 839
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L +M G++P+ +++ SL+
Sbjct: 840 RELFKEMKALGVIPNVISYTSLI 862
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 242/520 (46%), Gaps = 54/520 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR---------FNMTPSLKIFNSILDVLVKE 59
PD F +I L + +N+ + A + R +++ P + + ++D+L KE
Sbjct: 8 PDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKE 67
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ + M+ G D TY+ L+KGLC+ +R+ + L M+ G +P+++ Y
Sbjct: 68 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 127
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----------EPNDVTFSILICAYCKEENLVNALVL 169
TL+ LC+ G + A L +M +P +++SI+I CK+ A L
Sbjct: 128 GTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEAREL 187
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
++ + G +PDV++ T ++ C G+ K C F EM
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWE------------------KAKCLF-NEMLD 228
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P+V T +LI +C+ G + A ++ M G + VTY TLI+GLC RI +
Sbjct: 229 VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISE 288
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---------EKLFPR 340
++ M+ K G + Y +++ GL + + + AL ++M + + P
Sbjct: 289 ATQLFMSMK--KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD 346
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
S+ I C +G V +A + MI+ G + ++V Y LI C E R+ EA+ L
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL---PGSGHYSPLIK 457
M G P A T+ T++ GLC+ GN+ AL+L +E + GR + P YS +I
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
LC+ A L +M +GI+PD +++ +L+ CLS
Sbjct: 467 GLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLS 506
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 237/513 (46%), Gaps = 49/513 (9%)
Query: 9 PDESIFITVIRGLGRARMIN-------DVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
PD + T+++GL + IN +++ T + P + + ++D+L KE
Sbjct: 303 PDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGK 362
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ + M+ G D TY+ L+KGLC+ +R+ + L M+ G +P+++ Y T
Sbjct: 363 VIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGT 422
Query: 122 LIHSLCKNGKVGRARSLMSDME----------EPNDVTFSILICAYCKEENLVNALVLLE 171
L+ LC+ G + A L +M +P +++SI+I CK+ A L E
Sbjct: 423 LMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFE 482
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
+ + G +PDV++ T ++ C G+ K C F EM G
Sbjct: 483 EMKAQGIMPDVISYTTLIHGFCLSGKWE------------------KAKCLF-NEMLDVG 523
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+V T ++LI C+ G + A + + G + VT TL++GLC RI
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--------KLFPRAVD 343
++ M+ K G + +++ GL + ALE K M P A+
Sbjct: 584 QLFLKMQ--KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 641
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S+ I G C G ++A+ F +M G +P+V+ Y LIH +C+ + ++A L EM
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P +TF+ ++ LC++G V A +L+E I RG +P + Y+ L+K LC
Sbjct: 702 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLE---VMIQRGCIPNTVTYTTLVKGLCMND 758
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
A+ L ++M G LPD +T+ +L+ L Q
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQ 791
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 243/527 (46%), Gaps = 63/527 (11%)
Query: 26 MINDVVKATDLVSRFNMTPSLK----IFNSILDVLVKEDID----LARAFYRKK------ 71
M+ DV+ T L+ F + + +FN +LDV ++ D+ L F ++
Sbjct: 196 MMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEAN 255
Query: 72 -----MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M+ G D TY+ L+KGLC+ +R+ + +L MK G +P+++ Y TL+ L
Sbjct: 256 ELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGL 315
Query: 127 CKNGKVGRARSLMSDME-----------EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
C+ GK+ A L +M P+ T S+LI CKE ++ A LLE
Sbjct: 316 CQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQ 375
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G + D+VT + +++ LC R+ +A + M++ GC P+
Sbjct: 376 RGCILDIVTYSTLIKGLCMEHRISEATWLF-------------------MSMQKLGCRPD 416
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKID----GISW--NFVTYDTLIRGLCSGGRIDD 289
TY L+ C+TG ++ AL + +M D GI ++Y +I GLC R D+
Sbjct: 417 AITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDE 476
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
++ + M+ +G + Y ++++G + ++A +M + P S+
Sbjct: 477 ARELFEEMK--AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 534
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I C G V +A + + +I+ G + +VV L+ C + R+ +A++L +M G
Sbjct: 535 IDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGC 594
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE---DMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+P T T++ GLC+ GN+ AL+L + D G P + YS +I LC+ G
Sbjct: 595 MPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGR 654
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
A L +M G++PD +++ SL+ + W L NEMV
Sbjct: 655 EDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 701
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 203/443 (45%), Gaps = 58/443 (13%)
Query: 26 MINDVVKATDLVSRFNMTPSLK----IFNSILDVLVKEDIDLA-----------RAFYRK 70
++ DV+ T L+ F ++ + +FN +LDV ++ D+ + +
Sbjct: 489 IMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEAN 548
Query: 71 KMMASGVQG----DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K++ +Q D T L+KGLC+ +R+ +L M+ G PN V TL+ L
Sbjct: 549 KLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGL 608
Query: 127 CKNGKVGRA----RSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
C++G + A ++++SD +PN +++SI+I CK A L ++ +
Sbjct: 609 CQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL 668
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G +PDV++ T ++ C R GK K EM G P+V
Sbjct: 669 GVIPDVISYTSLIHGFC-------------------RSGKWKDAKYLFNEMVDIGVQPDV 709
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
T+++LI C+ G + A ++ M G N VTY TL++GLC RI + ++
Sbjct: 710 TTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMK 769
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--------EKLFPRAVDRSLKI 348
M+ K G + Y +++ GL + ALE K+M P + S+ I
Sbjct: 770 MQ--KLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIII 827
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G ++A+ F +M G +PNV+ Y LIH +C+ ++ +A L EM G
Sbjct: 828 DGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQ 887
Query: 409 PIASTFNTVLSGLCRQGNVGTAL 431
A T++ ++ G C++G + AL
Sbjct: 888 LNAVTYSVMIHGFCKEGQIDKAL 910
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 194/472 (41%), Gaps = 90/472 (19%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G+ D +T+ IL+ LC RV +G + + RG P+ V Y+
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSI---------- 50
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
P+ T S+LI CKE ++ A LLE G + D+VT + +++
Sbjct: 51 ------------RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKG 98
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC R+ +A + M++ GC P+ TY L+ C+TG
Sbjct: 99 LCMEHRISEATWLF-------------------MSMQKLGCRPDAITYGTLMKGLCQTGN 139
Query: 252 LDSALDVFNDMKID----GISW--NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
++ AL + +M D GI ++Y +I GLC R D+ ++ + M+ +G
Sbjct: 140 INIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK--AQGMM 197
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y S+++G + ++A +M + P + I FC +G V +A
Sbjct: 198 PDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANEL 257
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ M+ G + ++V Y LI C + R+ EA++L M G P A + T++ GLC+
Sbjct: 258 LEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQ 317
Query: 424 QGNVGTALKLVEEDMRG---------------------------------------IGRG 444
G + AL L +E + I RG
Sbjct: 318 TGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 377
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ YS LIK LC + A+ L + M G PD +T+ +L+ L Q
Sbjct: 378 CILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQ 429
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 30/253 (11%)
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M++ G+ + T++ LI LC+ R+++GL + + G+ R
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGL---------------------AAMAGIMRR 39
Query: 322 NQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ + Y + P S+ I C +G V +A + MI+ G + ++V Y
Sbjct: 40 GYIPDIVTY-----SIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYST 94
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI C E R+ EA+ L M G P A T+ T++ GLC+ GN+ AL+L +E +
Sbjct: 95 LIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154
Query: 442 GRGSL---PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
GR + P YS +I LC+ A L +M +G++PD +++ SL+
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214
Query: 499 TW-LLLLLLNEMV 510
W L NEM+
Sbjct: 215 KWEKAKCLFNEML 227
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 247/499 (49%), Gaps = 30/499 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + F ++ L + + + + D V + + P+L FN + L KE L RA
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG-SLDRAVR 351
Query: 69 RKKMMA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ G++ D TY ++ GLC +RV + + LH M + G +PN YN++I C
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A ++ D +P++ T+ L+ +C++ + A+ + + G P ++
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 471
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+++ LC G ++ A++++ E E+G ++G + + +
Sbjct: 472 VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDA 531
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KGC+P++ TYN L+ YC LDSA+++ N M G++ + +TY+TL+ GLC +
Sbjct: 532 ITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++ ++I + M +++G I YN+++ L + +EA++ L +M+ L P V
Sbjct: 592 EEVMEIFKAM--TEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFG 649
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPN-VVIYDCLIHAYCQEERVREASELMKEMTG 404
I GFC G+++ A F M ++ V + Y+ +I A+ ++ ++ A L EM
Sbjct: 650 TLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKK 709
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G P T+ ++ G C+ GNV K + E+ I +G +P + ++ LC +
Sbjct: 710 NGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN---IEKGFIPSLTTFGRVLNCLCVEHK 766
Query: 465 FQSASMLLVQMVGKGILPD 483
Q A ++ MV K I+PD
Sbjct: 767 VQEAVGIIHLMVQKDIVPD 785
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 237/504 (47%), Gaps = 29/504 (5%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +++ +R GR I + V + + FN PS+ +N+I+++LV+ + A Y
Sbjct: 155 EGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYM 214
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M V+ D YTY I +K C T R +LL M G N+V Y T++ +
Sbjct: 215 R-MKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEF 273
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G RAR L +M E P+ TF+ L+ A CK+ ++ + L +K G P++ T
Sbjct: 274 GDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTF 333
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCRFLKEMERKGCL----- 233
++ LC G + AV +L +G V G CR + +E + CL
Sbjct: 334 NIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVN 393
Query: 234 ----PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
PN TYN +I YC+ G++ A + D G + TY +L+ G C G D
Sbjct: 394 GGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQ 453
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+ + + + +G + I YN+++ GL ++ AL+ + +M + P +L
Sbjct: 454 AMAVFK--DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C G + DA I +G +P++ Y+ L+ YC++ ++ A EL+ M G
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+NT+L+GLC+ +++ + +G P Y+ +I++LC
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTE---KGCAPNIITYNTIIESLCNSKKVNE 628
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL +M KG+ PD +++ +L+
Sbjct: 629 AVDLLGEMKSKGLTPDVVSFGTLI 652
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 150/337 (44%), Gaps = 43/337 (12%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR GK++ + M+ C P+V +YN +++ E G + A V+ MK + +
Sbjct: 166 GRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDV 225
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
TY I+ C GR L++L+ M G Y +V+ G Y D A E
Sbjct: 226 YTYTIRIKSFCRTGRPYAALRLLRNM--PVLGCFSNAVAYCTVVTGFYEFGDNDRARELF 283
Query: 332 KQM----------------------------EKLFPRAVDR---------SLKILGFCVD 354
+M E+LF + + R ++ I G C +
Sbjct: 284 DEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKE 343
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G+++ A R + EG P+VV Y+ +I C++ RV EA E + +M G+ P T+
Sbjct: 344 GSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTY 403
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+++ G C++G V A +++++ + +G P Y L+ C+ G A +
Sbjct: 404 NSIIDGYCKKGMVVDANRILKD---AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 460
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
+GKG+ P + +N+L+ L QQ L L L+NEM
Sbjct: 461 GLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMA 497
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 5/181 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + T+I L ++ +N+ V + +TP + F +++ K D+D A
Sbjct: 608 PNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGL 667
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R V TY I++ + +L MK G P++ Y LI C
Sbjct: 668 FRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFC 727
Query: 128 KNGKVGRA-RSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V + + L+ ++E+ P+ TF ++ C E + A+ ++ VPD V
Sbjct: 728 KTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787
Query: 184 T 184
Sbjct: 788 N 788
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 113/284 (39%), Gaps = 76/284 (26%)
Query: 288 DDGLKILQLMEDSKEGSKGRISPY----------------------------NSVLYGLY 319
D ++ LQL++ +K+G K + Y N++L G+Y
Sbjct: 99 DVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVY 158
Query: 320 --------RENQQDEALEYLKQME----------------------------KLFPRAVD 343
R+ + EA++ ++M+ K++ R D
Sbjct: 159 VEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKD 218
Query: 344 RSL---------KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ + +I FC G A R M G N V Y ++ + +
Sbjct: 219 KKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDR 278
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A EL EM P +TFN ++ LC++G V + +L ++ ++ RG P ++
Sbjct: 279 ARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLK---RGVCPNLFTFNI 335
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
I+ LC++G A LL + +G+ PD +T+N+++ L +++
Sbjct: 336 FIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKS 379
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 237/537 (44%), Gaps = 45/537 (8%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKA------TDLVSRFNMTPSLKIFNSILD 54
MP + PDE + TV+ GL +A + + V+ S + PSL+ +N ++
Sbjct: 238 MPDE-ECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVIL 296
Query: 55 VLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK 113
L + D ID A + +KM V D ++Y IL+ GL ++ D L + GV
Sbjct: 297 GLCQNDRIDEAVQMF-EKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL 169
P++V Y +LIH LC AR L +DM P+ VT++++I A CK L A L
Sbjct: 356 PSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDL 415
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------- 212
++K G VPDVVT V++ LC RV +A+ + E G
Sbjct: 416 IKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQ 475
Query: 213 --------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ GK+ R LK M G +P+V TY+ LIS C +D A + DM
Sbjct: 476 QSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
VT +TLI GLC GRI + ++L M S G + YN++++G R Q
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSS--GQSPDVVTYNTLVHGHCRAGQT 593
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A E L M L P V + + G C + +A F QM G PN+ Y L
Sbjct: 594 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 653
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I +C +V +L EM G P + T+ + LC+ G AL+++ E +
Sbjct: 654 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESL- 712
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
R G Y + L E G + A + MV G LP SL+ +C S Q
Sbjct: 713 RSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQ 769
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 209/439 (47%), Gaps = 41/439 (9%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y I++ GLC +R+ + ++ M R V P+S Y LI L K GK+ AR+L +
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
P+ V ++ LI C + +A L G P VT +++ C G
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRG--- 407
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+LEE+ C +K+M G +P+V TYN ++ C++ ++ AL +F
Sbjct: 408 ----MLEEA------------CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 451
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSG---------GRIDDGLKILQLMEDSKEGSKGRISP 310
N+M+ G + N +++T+I GLC G++D+ ++L+ M D +G +
Sbjct: 452 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD--DGHVPDVVT 509
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y++++ GL + D+A L+ M K P V ++ I G C G +++A+ D M+
Sbjct: 510 YSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMV 569
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+VV Y+ L+H +C+ + A EL+ +M G P T+ ++SGLC+ +
Sbjct: 570 SSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLP 629
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A + + M+ G P Y+ LI C G L +MV GI PD++ +
Sbjct: 630 EACGVFAQ-MK--SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 686
Query: 489 SLL--ICLSQQTTWLLLLL 505
+L +C S ++ L +L
Sbjct: 687 TLAAELCKSGRSARALEIL 705
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 241/518 (46%), Gaps = 46/518 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P +F +VI+G + VK L+ + +P ++N ++D L K A
Sbjct: 8 PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-SPYPDVYNVLIDSLSKRQETEAVKKM 66
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M+ G D +T+ ++ GLC ++ + ++ M+SR + P + L H LC
Sbjct: 67 VQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCL 126
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV-TITK 187
G + RA L+ M N ++I++ A CK + +AL L ++ S +P ++
Sbjct: 127 RGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALEL-ARTMSEKRIPLAAGSLDS 185
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL-------------GKVKGGCRFLKEMERKGCLP 234
VL L GR+ +A+++ E+ + L G+V L+ M + C P
Sbjct: 186 VLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAP 245
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT------YDTLIRGLCSGGRID 288
+ +Y ++ C+ G ++ A+ +F D ++ S + + Y+ +I GLC RID
Sbjct: 246 DEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRID 305
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
+ +++ + M + +SP Y ++ GL + + ++A +++ + P V
Sbjct: 306 EAVQMFEKMNERN------VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTV 359
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G C+ + +DA+ F M G P+ V Y+ +I A C+ + EA +L+K+M
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL--- 459
G++P T+NTV+ GLC+ V AL L E R G P ++ +I L
Sbjct: 420 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER---LGCTPNRRSHNTIILGLCQQ 476
Query: 460 ------CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C++G A LL +M G +PD +T+++L+
Sbjct: 477 SKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 514
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 185/414 (44%), Gaps = 49/414 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA--- 64
PD + TV+ GL ++ + + + + + R TP+ + N+I+ L ++ ID A
Sbjct: 426 PDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQR 485
Query: 65 ----RAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
AF K+M G D TY+ L+ GLC RV D LL M R KP V
Sbjct: 486 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 545
Query: 120 NTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NTLIH LCK G++ AR ++ M + P+ VT++ L+ +C+ A LL +
Sbjct: 546 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 605
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G P+VVT T ++ LC R+ +A C +M+ GC PN
Sbjct: 606 RGLAPNVVTYTALVSGLCKANRLPEA-------------------CGVFAQMKSSGCAPN 646
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TY LI +C G +D L +F +M GIS + V Y TL LC GR L+IL+
Sbjct: 647 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILR 706
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
+S Y + GL + + AL +++ M + P + + G C
Sbjct: 707 EGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 766
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
G +GG V+ + + AY + R + A++ ++EM G GY
Sbjct: 767 SG--------------QGGEARAVLEEIMDLAYGGKARGK-AAKFVEEMVGKGY 805
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 157/380 (41%), Gaps = 66/380 (17%)
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEI---LEESGEQ------------GRLGKVK 218
F G P + T V++ C+VGR +AV+I +EE + + +
Sbjct: 2 FQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETE 61
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ ++ M +GC P+ T+ ++ C+ G +D A V ++M+ I F T L
Sbjct: 62 AVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLA 121
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKL 337
LC G ++ ++L++M + S YN V+ L + + D+ALE + M EK
Sbjct: 122 HELCLRGSMERAFQLLEIMPVANS------SAYNIVVVALCKAARVDDALELARTMSEKR 175
Query: 338 FPRA----------------VDRSLKIL-----------------GFCVDGNVEDAKRCF 364
P A +D +L++ GFC G V+ A+
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELL 235
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREA------SELMKEMTGHGYLPIASTFNTVL 418
M +E P+ V Y ++ C+ RV EA EL + P +N V+
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GLC+ + A+++ E+ R P S Y LI L + G A L +++
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNE---RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS 352
Query: 479 GILPDYLTWNSLL--ICLSQ 496
G+ P + + SL+ +C++
Sbjct: 353 GVTPSTVAYTSLIHGLCMAN 372
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 248/517 (47%), Gaps = 35/517 (6%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M ++ S E ++I ++R GR + + V + + ++ PS++ +N+I+++LV+
Sbjct: 66 MRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYG 125
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
A Y + M G+ D YT+ I MK C+T R +LL+ M +G + N+V Y
Sbjct: 126 YFSQAHKVYMR-MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+I K A L +M + P+ +TF+ LI CK+ N+ + L K
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR------ 222
G P++ T ++ LC G + +A +LE +G V G C+
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 223 ---FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+L +M G PN TYN +I+ +C+ G++ +A + D G + TY +LI
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC+ G ++ + + E ++G K I YN+++ GL ++ +AL+ +K M +
Sbjct: 365 GLCNDGDMNRAMAV--FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P +L + G C G + DA + I +G +P++ ++ LI YC++ + +A E
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQ---GNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
++ M HG P T+NT+L+GLC+ NV K + E +G P Y+
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE------KGCTPNIITYNI 536
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LI++ C+ A L +M +G+ PD +T +L+
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 30/505 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ VI G + + D + + + P + FN ++ VL K+ ++ + + K+
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF-SKV 242
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
M GV + +T+ I ++GLC + + +LL + S G+ P+ + YNTLI CK+ K+
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + M EPN+ T++ +I +CK + NA +L + GF+PD T + +
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ LC+ G + A+ + E+ E+G + G V + +K+M GC
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P++ TYN++++ C+ G L A + ND G + T++TLI G C +D ++
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILG 350
IL M G + YN++L GL + + D ++ K M EK P + ++ I
Sbjct: 483 ILDTM--LSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC D V +A F +M G P++V LI C + +A EL +
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY 600
Query: 411 AST-FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
++ FN +++ C + NV A KL + G P + Y +I + C+ G A
Sbjct: 601 STAIFNIMINAFCXKLNVSMAEKLFH---KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAH 657
Query: 470 MLLVQMVGKGILPDYLTWNSLLICL 494
L++ + KG++P + T +L CL
Sbjct: 658 TFLLENISKGLVPSFTTCGKVLNCL 682
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 231/482 (47%), Gaps = 31/482 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F I+GL R I++ + + + +TP + +N+++ K + Y
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECY 308
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ SGV+ +++TY ++ G C + + K+L +G P+ Y++LI+ LC
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + RA ++ + E + + ++ L+ K+ ++ AL L++ G PD+ T
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
V+ LC +G + DA IL ++ KGC+P++ T+N LI
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIA-------------------KGCIPDIFTFNTLID 469
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A+++ + M GI+ + +TY+TL+ GLC ++D+ + + M + +G
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE--KGC 527
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN ++ ++ + EA+E K+M+ L P V I G C +G ++ A
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 363 CFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +E + I++ +I+A+C + V A +L +M G P T+ ++
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ GN+ A + E+ I +G +P ++ LC A +++ MV GI+
Sbjct: 648 CKTGNIDLAHTFLLEN---ISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIV 704
Query: 482 PD 483
P+
Sbjct: 705 PE 706
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 230/489 (47%), Gaps = 66/489 (13%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L FN+I++ + + + ++A G D +TY L+ GL ++ L
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------------------- 144
L M+ V+PN V+Y+ LI LCK+G V A L S + E
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242
Query: 145 --------------------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
P+D TF+ILI A CKE ++ A +L G PD+VT
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++E CS V +A E+ M ++G P+V YN+LI
Sbjct: 303 YNALMEGYCSRENVHEAREL-------------------FNRMVKRGLEPDVLNYNVLID 343
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+T ++D A+ +F ++ + +Y++LI GLC+ GRI K+L M S +
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YN ++ L +E + EAL L M K + P V + + G+C+ NV AK
Sbjct: 404 D--VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F++M++ G P+++ Y+ LI+ YC+ E V EA L KEM +P +++N+++ GLC
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G + +L++E G P Y+ L+ A C+ F A L Q+V +GI P
Sbjct: 522 NLGRIPHVQELLDE---MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWP 577
Query: 483 DYLTWNSLL 491
D+ T ++++
Sbjct: 578 DFYTNHAIV 586
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 208/435 (47%), Gaps = 33/435 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM+ V DDYT+ IL+ LC R+ + +L +M RG KP+ V YN L+ C
Sbjct: 255 KMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE 314
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V AR L + M EP+ + +++LI YCK + + A+VL ++ + VP + +
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYN 374
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC+ GR+ VK + L EM P+V TYNILI +
Sbjct: 375 SLIDGLCN----------------SGRISHVK---KLLDEMHGSAQPPDVVTYNILIDAL 415
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + AL V M G+ N VTY+ ++ G C ++ I M K G +
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM--VKSGLEP 473
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN ++ G + DEA+ K+M + L P + I G C G + +
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELL 533
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M + G P+V+ Y+ L+ A+C+ + +A L +++ G P T + ++ LC+
Sbjct: 534 DEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCK- 591
Query: 425 GNVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G LK+ E+ ++ + G P Y+ LI ALC+ G F A +LL +M PD
Sbjct: 592 ---GEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648
Query: 484 YLTWNSLLICLSQQT 498
+T+ ++ L Q+
Sbjct: 649 AITFEIIIGVLLQRN 663
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 205/422 (48%), Gaps = 27/422 (6%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
C V D + M P + +++ L+ ++ + G A SL + ++ P+
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
TF+ILI Y + + A LL G+ P++VT ++ C G + A++ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 208 SGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
QG L G++K L+EME+ PN+ Y+ LI C+ G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ AL + + + GI + VTY++LI G CS GR + ++L M +E +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM--VRENVDPDDYTF 268
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ L +E + EA L M K P V + + G+C NV +A+ F++M++
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+V+ Y+ LI YC+ + V EA L KE+ +P +++N+++ GLC G +
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
KL++E M G + P Y+ LI ALC++G A +LV M+ KG+ P+ +T+N+
Sbjct: 389 VKKLLDE-MHGSAQP--PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 490 LL 491
++
Sbjct: 446 MM 447
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 205/456 (44%), Gaps = 26/456 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + ++I G +V + + R N+ P FN ++D L KE L
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL 288
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G + D TY LM+G C V + +L + M RG++P+ + YN LI CK
Sbjct: 289 AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
V A L ++ P +++ LI C + + LL++ PDVVT
Sbjct: 349 KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTY 408
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMER 229
+++ LC GR+++A+ +L ++G + G C M +
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P++ YN+LI+ YC+T ++D A+ +F +M+ + + +Y++LI GLC+ GRI
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKI 348
++L M DS G + YN +L + D+A+ +Q+ E ++P +
Sbjct: 529 VQELLDEMCDS--GQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIV 586
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C ++ A+ ++ G PNV Y LI+A C++ EA L+ +M +
Sbjct: 587 DNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRP 646
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
P A TF ++ L ++ A KL EE I RG
Sbjct: 647 PDAITFEIIIGVLLQRNETDKAEKLREE---MIARG 679
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 163/407 (40%), Gaps = 86/407 (21%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + + ++I GL + I+ V K D + P + +N ++D L KE L
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
MM GV+ + TY +M G CL N V + + M G++P+ + YN LI+ CK
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
V A L +M N +PD+ + +
Sbjct: 488 TEMVDEAIVLFKEMRHKN-------------------------------LIPDIASYNSL 516
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ LC++GR+ E+L+E + G+ P+V TYNIL+ ++C+
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQ-------------------SPDVITYNILLDAFCK 557
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
T D A+ +F + ++GI +F T ++ LC G + L++ ED
Sbjct: 558 TQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEK-------LKMAED--------- 600
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
AL++L M P ++ I C DG+ +A +M
Sbjct: 601 ------------------ALKHL-LMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ P+ + ++ +I Q +A +L +EM G + I + N
Sbjct: 642 DNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLN 688
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/445 (29%), Positives = 224/445 (50%), Gaps = 64/445 (14%)
Query: 50 NSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
N +L LVKE + F ++M+ ++ + ++ I++ GLC ++ ++ MK
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVG---RARSLMSDMEE----PNDVTFSILICAYCKEEN 162
GV PN + YNTLI CK G++G +A +++ +M PN+VT++ILI +CK+EN
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A+ + + G P+VVT ++ LCS G+V +AV + +
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRD---------------- 287
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+M PNV T+N+LI+ +C+ ++ A+++FNDM+ G+ N +TY TLI C
Sbjct: 288 ---QMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
GR++D + +M D G +S YN ++ GL
Sbjct: 345 KDGRMEDAFALYNMMID--RGIFPEVSTYNCLIAGL------------------------ 378
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
C G+V+ A+ ++M+ + +VV Y+ LI + C++ R+A +L+ EM
Sbjct: 379 ---------CRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P T+NT++ G CR+GN+ AL +V M +G ++ LIK C K
Sbjct: 430 FEKGLNPSHVTYNTLMDGYCREGNLRAAL-IVRTRME--RKGKQANVVTHNVLIKGFCLK 486
Query: 463 GGFQSASMLLVQMVGKGILPDYLTW 487
G + A+ LL +M+ +G++P+ T+
Sbjct: 487 GRLEDANGLLNEMLERGLVPNRTTY 511
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 210/449 (46%), Gaps = 29/449 (6%)
Query: 51 SILDVLVK--EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
S LD VK +D ++ F+ M + +L+ ++ GF+
Sbjct: 53 SFLDKFVKYEKDYSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAG 112
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLV 164
G K + + N L+ L K + G R ++ E N ++F+I++ CK L
Sbjct: 113 DYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLN 172
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A ++E +G P+V+T +++ C +GR+ GK+ L
Sbjct: 173 RAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRI----------------GKMYKADAIL 216
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
KEM KG PN TYNILI +C+ + A+ VF +M+ G+ N VTY+ LI GLCS
Sbjct: 217 KEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSD 276
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G++D+ + + M S + + +N ++ G + +EA+ MEK + P A+
Sbjct: 277 GKVDEAVALRDQMVSSD--LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAM 334
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I +C DG +EDA ++ MI+ G P V Y+CLI C++ V+ A LM EM
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
T+N ++ LC++G A+KL++E +G P Y+ L+ C +
Sbjct: 395 VSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFE---KGLNPSHVTYNTLMDGYCRE 451
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G ++A ++ +M KG + +T N L+
Sbjct: 452 GNLRAALIVRTRMERKGKQANVVTHNVLI 480
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 152/292 (52%), Gaps = 13/292 (4%)
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+EM ++ NV ++NI+++ C+ G L+ A DV DMK+ G+S N +TY+TLI G C
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LF 338
GRI K ++ KE I P YN ++ G ++ A+ +M++ L
Sbjct: 204 GRIGKMYKADAIL---KEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V ++ I G C DG V++A DQM+ PNVV ++ LI+ +C+ + V EA L
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+M G P A T+ T++ C+ G + A L I RG P Y+ LI
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYN---MMIDRGIFPEVSTYNCLIAG 377
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEM 509
LC KG ++A L+ +MV K + D +T+N L+ L ++ + + LL+EM
Sbjct: 378 LCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 150/314 (47%), Gaps = 27/314 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
P+ + T+I G + I + KA ++ + P+ +N ++D K E++ A
Sbjct: 188 PNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGA 247
Query: 65 -RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
R F +M G++ + TY IL+ GLC +V + L M S ++PN V +N LI
Sbjct: 248 MRVF--GEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLI 305
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ CKN V A +L +DME +PN +T++ LI AYCK+ + +A L G
Sbjct: 306 NGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIF 365
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+V T ++ LC G V A ++ E + + G+ + +
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L EM KG P+ TYN L+ YC G L +AL V M+ G N VT++ LI+G C
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485
Query: 284 GGRIDDGLKILQLM 297
GR++D +L M
Sbjct: 486 KGRLEDANGLLNEM 499
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 149/302 (49%), Gaps = 22/302 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E + +I G + ++ ++ + R + P++ +N +++ L + +D A A
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R +M++S ++ + T+ +L+ G C V + L + M+ +GV PN++ Y TLI + C
Sbjct: 286 -RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ A +L + M + P T++ LI C++ ++ A L+ + S DVV
Sbjct: 345 KDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVV 404
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ LC G AV++L+E E+G R G ++ M
Sbjct: 405 TYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRM 464
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
ERKG NV T+N+LI +C G L+ A + N+M G+ N TY+ + + G +
Sbjct: 465 ERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524
Query: 288 DD 289
D
Sbjct: 525 PD 526
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 171/665 (25%), Positives = 275/665 (41%), Gaps = 121/665 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PDE + +I G R I+D V+ D + R + +L I NS+++ K +I A
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ ++ D Y+Y L+ G C + F L M G++P + YNTL+ LC
Sbjct: 390 I-TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + M + P++V +S L+ K EN A L + + GF +
Sbjct: 449 RVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508
Query: 184 TITKVLELLCSVGRVMDAVEILEE----------------------SGEQGRLGKVKGGC 221
T ++ LC +G++++A EI ++ + G+ KVKG
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 222 R-----------------------------FLKEMERKGCLPNVDTYNILISSYCETGVL 252
L EM +G PN+ TY LI +C+ G+L
Sbjct: 569 EREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------------ 300
D A + +M +G+S N + T++ GL GRID+ ++Q M D
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688
Query: 301 --------------KEGSKGRISP----YNSVLYGLYRENQQDEALEYLK--QMEKLFPR 340
E K + P YN + GL + + D+A + ++ P
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
I G+ GNV++A R D+M+ G VPN+V Y+ LI+ C+ E V A L
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ G P T+NT++ G C+ GN+ A KL + + I G P YS LI LC
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD---KMIEEGISPSVVTYSALINGLC 865
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLI---------------CLSQQTTWLLLLL 505
+ G + + LL QM+ G+ + + +L+ L Q LL
Sbjct: 866 KHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNCFLLPK 925
Query: 506 LNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTH---TFIIDRRVEI 562
FV VV C +R + G++W L I+++ H + IID ++
Sbjct: 926 FKHSWKFVGVV------ALDCPIR----IFGPKGTIWFNL-INESWHVKDSKIIDXAPDL 974
Query: 563 GHVFC 567
G + C
Sbjct: 975 GILSC 979
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 228/492 (46%), Gaps = 28/492 (5%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
++F +++ + + + D + + PSL+ NS+L+ LVK + ++
Sbjct: 157 TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 216
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D + +I++ C +V + + M++ GV+PN V Y++LI+ G
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276
Query: 132 VGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNA-LVLLEKSFSFGFVPDVVTIT 186
V A+ ++ M E N VT+++LI YCK+ + A VL VPD
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRFLKEMERKGCL------ 233
+++ C G++ DAV +L+E G + G C+ + E +G +
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396
Query: 234 ---PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+ +YN L+ YC G A ++ + M +GI +TY+TL++GLC G DD
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYR-ENQQDEALEYLKQMEKLFPRA-VDRSLKI 348
L+I LM K G Y+++L GL++ EN + + + + + F ++ + + I
Sbjct: 457 LQIWHLM--MKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G + +A+ FD+M + G P+ + Y LI YC+ V +A ++ M
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXIS 574
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +N+++SGL + + L+ E GI RG P Y LI C++G A
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEXTDLLTE--MGI-RGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 469 SMLLVQMVGKGI 480
+M G+
Sbjct: 632 FSSYFEMTENGL 643
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 205/435 (47%), Gaps = 40/435 (9%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V DD A+L + L L GF V K + +PN Y L+H L + R
Sbjct: 65 VFSDDIVDAVL-RNLRLNPTASLGF-FQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETR 122
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLV-NALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+ ++ + + +C + N++ + LV + + F+F P V + +L++
Sbjct: 123 AYLNQLVD---------LCKFKDRGNVIWDELVGVYREFAFS--PTVFDM--ILKVYVEK 169
Query: 196 GRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTY 239
G +A+ + + G+ GR+ G+ ++M R G +P+V
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+I+++++C+ G +D A M+ G+ N VTY +LI G S G ++ +L+ M
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM-- 287
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGN 356
S++G + Y ++ G ++ + DEA + L+ M++ L P + I G+C G
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++DA R D+M+ G N+ I + LI+ YC+ + EA ++ M P + ++NT
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L G CR+G+ A L ++ ++ G P Y+ L+K LC G F A + M+
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQ---EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464
Query: 477 GKGILPDYLTWNSLL 491
G+ PD + +++LL
Sbjct: 465 KXGVAPDEVGYSTLL 479
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 248/517 (47%), Gaps = 35/517 (6%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M ++ S E ++I ++R GR + + V + + ++ PS++ +N+I+++LV+
Sbjct: 66 MRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYG 125
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
A Y + M G+ D YT+ I MK C+T R +LL+ M +G + N+V Y
Sbjct: 126 YFSQAHKVYMR-MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSY 184
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+I K A L +M + P+ +TF+ LI CK+ N+ + L K
Sbjct: 185 CAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMK 244
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR------ 222
G P++ T ++ LC G + +A +LE +G V G C+
Sbjct: 245 RGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVE 304
Query: 223 ---FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+L +M G PN TYN +I+ +C+ G++ +A + D G + TY +LI
Sbjct: 305 AECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC+ G ++ + + E ++G K I YN+++ GL ++ +AL+ +K M +
Sbjct: 365 GLCNDGDMNRAMAV--FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P +L + G C G + DA + I +G +P++ ++ LI YC++ + +A E
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQ---GNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
++ M HG P T+NT+L+GLC+ NV K + E +G P Y+
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE------KGCTPNIITYNI 536
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LI++ C+ A L +M +G+ PD +T +L+
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 30/505 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ VI G + + D + + + P + FN ++ VL K+ ++ + + K+
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLF-SKV 242
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
M GV + +T+ I ++GLC + + +LL + S G+ P+ + YNTLI CK+ K+
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + M EPN+ T++ +I +CK + NA +L + GF+PD T + +
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ LC+ G + A+ + E+ E+G + G V + +K+M GC
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P++ TYN++++ C+ G L A + ND G + T++TLI G C +D ++
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILG 350
IL M G + YN++L GL + + D ++ K M EK P + ++ I
Sbjct: 483 ILDTM--LSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC D V +A F +M G P++V LI C + +A EL +
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSY 600
Query: 411 AST-FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
++ FN +++ C + NV A KL + G P + Y +I + C+ G A
Sbjct: 601 STAIFNIMINAFCEKLNVSMAEKLFH---KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAH 657
Query: 470 MLLVQMVGKGILPDYLTWNSLLICL 494
L++ + KG++P + T +L CL
Sbjct: 658 TFLLENISKGLVPSFTTCGKVLNCL 682
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 232/482 (48%), Gaps = 31/482 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F I+GL R I++ + + + +TP + +N+++ K + Y
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECY 308
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ SGV+ +++TY ++ G C + + K+L +G P+ Y++LI+ LC
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + RA ++ + E + + ++ L+ K+ ++ AL L++ G PD+ T
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
V+ LC +G + DA IL ++ KGC+P++ T+N LI
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIA-------------------KGCIPDIFTFNTLID 469
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A+++ + M GI+ + +TY+TL+ GLC ++D+ + + M + +G
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLE--KGC 527
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN ++ ++ + EA+E K+M+ L P V I G C +G ++ A
Sbjct: 528 TPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Query: 363 CFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +E + I++ +I+A+C++ V A +L +M G P T+ ++
Sbjct: 588 LFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSY 647
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ GN+ A + E+ I +G +P ++ LC A +++ MV GI+
Sbjct: 648 CKTGNIDLAHTFLLEN---ISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIV 704
Query: 482 PD 483
P+
Sbjct: 705 PE 706
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/512 (27%), Positives = 242/512 (47%), Gaps = 29/512 (5%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD F +IR L + D + D + +PS+ ++ +LD K
Sbjct: 159 PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMV 218
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M A G + D TY +L+ +C V + +L + S G KP++V Y ++ SLC
Sbjct: 219 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLC 278
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ + L ++M P++VTF+ ++ + C++ + A+ +++ G +PD+V
Sbjct: 279 GSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIV 338
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGC---------RFLKEM 227
T + +L+ LC VGRV DAVE+L G +KG C + EM
Sbjct: 339 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEM 398
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
C P+ T+N +I+S C+ G++D A+ V M +G + + VTY+++I GLC+ I
Sbjct: 399 VCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCI 458
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
DD +++L ++ G K I +N++L GL ++ ++A + + M P A +
Sbjct: 459 DDAMELLSNLQ--SYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFN 516
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I C G + A M E G +PN Y+ ++ A + + +EA +L+ MT
Sbjct: 517 TVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG 576
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NTV+S + + G + AL L+ + G P + Y L +C + G
Sbjct: 577 --TPDLITYNTVISNITKAGKMEEALDLLR---VMVSNGLSPDTITYRSLAYGICREDGT 631
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A +L ++ G+ PD +N +L+ Q
Sbjct: 632 DRAIRMLCRLQDMGLSPDATFYNDILLGFCQN 663
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/458 (29%), Positives = 219/458 (47%), Gaps = 31/458 (6%)
Query: 54 DVLVKEDIDLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV 112
++L+K R +++ A+ G TY ++ G C R+ D +L+ M
Sbjct: 102 NILIKRLCSGGRVADAERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMP---F 158
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALV 168
P++ +N LI +LC G+V A ++ DM P+ VT+SIL+ A CK A+V
Sbjct: 159 PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMV 218
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------RLGKVK 218
LL++ + G PD+VT ++ +C+ G V +A+ IL + G L +
Sbjct: 219 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLC 278
Query: 219 GGCRF------LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
G R+ EM C P+ T+N +++S C+ G++D A+ V + M G + V
Sbjct: 279 GSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIV 338
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY +++ GLC GR+DD +++L ++ G K Y +VL GL Q + A E +
Sbjct: 339 TYSSILDGLCDVGRVDDAVELLSRLK--SYGCKPDTIAYTTVLKGLCSIEQWEHAEELMA 396
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M P V + I C G V+ A + +QM E G P++V Y+ +I C E
Sbjct: 397 EMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNER 456
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ +A EL+ + +G P TFNT+L GLC A +L+ M P +
Sbjct: 457 CIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS---DCPPDAT 513
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
++ +I +LC+KG A L M G +P+ T+N
Sbjct: 514 TFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYN 551
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 232/500 (46%), Gaps = 34/500 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAFYRKKM 72
+ T++ G RA I D A L+S P FN ++ L V+ + A A + M
Sbjct: 133 YNTMVNGYCRAGRIED---ARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVF-DDM 188
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G TY+IL+ C + LL M+++G +P+ V YN LI+++C G V
Sbjct: 189 LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDV 248
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +++SD+ +P+ VT++ ++ + C E L + S PD VT +
Sbjct: 249 DEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTI 308
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ LC G V A+++++ E G +G+V L ++ GC
Sbjct: 309 VTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 368
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ Y ++ C + A ++ +M + VT++T+I LC G +D +K
Sbjct: 369 KPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIK 428
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+++ M S+ G I YNS++ GL E D+A+E L ++ P V + + G
Sbjct: 429 VVEQM--SENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C EDA++ M+ P+ ++ +I + CQ+ + +A E +K M +G +P
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPN 546
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
ST+N V+ L + G ALKL + G+ G+ P Y+ +I + + G + A
Sbjct: 547 QSTYNIVVDALLKAGKTQEALKL----LSGMTNGT-PDLITYNTVISNITKAGKMEEALD 601
Query: 471 LLVQMVGKGILPDYLTWNSL 490
LL MV G+ PD +T+ SL
Sbjct: 602 LLRVMVSNGLSPDTITYRSL 621
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 195/418 (46%), Gaps = 30/418 (7%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP 145
IL+K LC RV D + V + G V YNT+++ C+ G++ AR L+S M P
Sbjct: 103 ILIKRLCSGGRVADAER---VFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMPFP 159
Query: 146 NDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
D TF+ LI A C + +AL + + G P VVT + +L+ C A+ +
Sbjct: 160 PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVL 219
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L+E M KGC P++ TYN+LI++ C G +D AL++ +D+
Sbjct: 220 LDE-------------------MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS 260
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + VTY +++ LC R + ++ M +K +N+++ L ++
Sbjct: 261 HGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVT--FNTIVTSLCQQGLV 318
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D A++ + M + P V S + G C G V+DA ++ G P+ + Y +
Sbjct: 319 DRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTV 378
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ C E+ A ELM EM P TFNTV++ LC++G V A+K+VE+
Sbjct: 379 LKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN-- 436
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
G P Y+ +I LC + A LL + G PD +T+N+LL L W
Sbjct: 437 -GCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 204/427 (47%), Gaps = 36/427 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PDE F T++ L + +++ +K D +S P + ++SILD L V + ++L
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++ + G + D Y ++KGLC + +L+ M P+ V +NT+I
Sbjct: 360 L-----SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVI 414
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
SLC+ G V RA ++ M E P+ VT++ +I C E + +A+ LL S+G
Sbjct: 415 ASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCK 474
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
PD+VT +L+ LCSV R DA +++ + G +
Sbjct: 475 PDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIET 534
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
LK M GC+PN TYNI++ + + G AL + + M +G + +TY+T+I +
Sbjct: 535 LKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT-NGTP-DLITYNTVISNITK 592
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
G++++ L +L++M G Y S+ YG+ RE+ D A+ L +++ L P A
Sbjct: 593 AGKMEEALDLLRVM--VSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDA 650
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ +LGFC + + A CF M+ G +P+ Y L+ A E + EA +L+
Sbjct: 651 TFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVN 710
Query: 402 MTGHGYL 408
+ G L
Sbjct: 711 LCSLGVL 717
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 153/349 (43%), Gaps = 37/349 (10%)
Query: 159 KEENLVNALVLLEKSFSFG----FVP-DVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
+ E + +AL L++ S G +P VV +++ LCS GRV DA + G
Sbjct: 70 QREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASA- 128
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
V TYN +++ YC G ++ A + + M ++ T
Sbjct: 129 ---------------------TVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTF---T 164
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
++ LIR LC GR+ D L + M G + Y+ +L + + +A+ L +
Sbjct: 165 FNPLIRALCVRGRVPDALAVFDDM--LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDE 222
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M P V ++ I C +G+V++A + G P+ V Y ++ + C ER
Sbjct: 223 MRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSER 282
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+E EL EM + P TFNT+++ LC+QG V A+K+V+ G +P
Sbjct: 283 WKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE---HGCIPDIVT 339
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
YS ++ LC+ G A LL ++ G PD + + ++L L W
Sbjct: 340 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQW 388
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 151/344 (43%), Gaps = 31/344 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
PPDE F TVI L + +++ +K + +S P + +NSI+D L E ID A
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAME 463
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + G + D T+ L+KGLC +R D +L+ M P++ +NT+I SL
Sbjct: 464 LL-SNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ G + +A + M E PN T++I++ A K AL LL S PD+
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLL--SGMTNGTPDL 580
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T V+ + G++ +A+++ L+ M G P+ TY L
Sbjct: 581 ITYNTVISNITKAGKMEEALDL-------------------LRVMVSNGLSPDTITYRSL 621
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C D A+ + ++ G+S + Y+ ++ G C R D + M S
Sbjct: 622 AYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSS-- 679
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
G S Y +L L E DEA + L + L +D+SL
Sbjct: 680 GCMPDESTYIILLEALAYECLLDEAKQLLVNLCSL--GVLDKSL 721
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 231/489 (47%), Gaps = 34/489 (6%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTY 84
++ D VK+ ++V+ + + N +++ L K+ Y +M GV D TY
Sbjct: 210 KVYEDFVKSGNIVNVYTL-------NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTY 262
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
L+ C V + F L+ M +G+KP YN LI+ LCK G RA+ ++ +M
Sbjct: 263 NTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLG 322
Query: 145 ----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
PN TF+ ++ C++E++ A + + G VPD+++ + ++ + G +
Sbjct: 323 VGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGR 382
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A+ E+ G R V G + EM +GC+ +V TYN L++
Sbjct: 383 ALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLN 442
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C +LD A ++F +M G+ +F T TLI G C G + L + + M +
Sbjct: 443 GLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM--TLRSL 500
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
K + YN+++ G + + ++A E M ++FP + S+ I GFC G V +A R
Sbjct: 501 KPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFR 560
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+D+M E+G P +V + +I Y + + +A++ + M G P T+NT+++
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
++ N A L+ RG LP Y+ ++ G Q A M+L +M+ KGI P
Sbjct: 621 KEENFDRAFFLINNMEE---RGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINP 677
Query: 483 DYLTWNSLL 491
D T+ SL+
Sbjct: 678 DKSTYTSLI 686
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 223/460 (48%), Gaps = 27/460 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + T++ R ++++ D ++ + P L +N++++ L KE
Sbjct: 258 DLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVL 317
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M+ G+ + T+ ++ C V + ++ + M RGV P+ + +++++ +N
Sbjct: 318 DEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRN 377
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G++GRA + M+ P+ V ++ILI YC+ +++ AL + + G V DVVT
Sbjct: 378 GELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTY 437
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMER 229
+L LC + DA E+ +E E+G + G C+ + M
Sbjct: 438 NTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTL 497
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ P+V TYN L+ +C+ G ++ A +++ DM I +++++ LI G CS G + +
Sbjct: 498 RSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSE 557
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
++ M++ +G K + N+++ G R +A ++L M E + P + +
Sbjct: 558 AFRLWDEMKE--KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I F + N + A + M E G +PN+V Y+ ++ + + R++EA ++ +M G
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
P ST+ ++++G + N+ A ++ +E ++ RG +P
Sbjct: 676 NPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ---RGFVP 712
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 161/357 (45%), Gaps = 26/357 (7%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P L F+SI+ V + +L RA Y +KM G+ D Y IL+ G C + V
Sbjct: 360 VVPDLISFSSIVGVFSRNG-ELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGA 418
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
K+ + M RG + V YNTL++ LC+ + A L +M E P+ T + LI
Sbjct: 419 LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 478
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---- 212
YCK+ N+ AL L E PDVVT +++ C VG + A E+ + +
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPS 538
Query: 213 ------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
LG V R EM+ KG P + T N +I Y G L A D N
Sbjct: 539 YISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLN 598
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M +G+ + +TY+TLI D ++ ME+ G + YN++L G R
Sbjct: 599 TMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEE--RGLLPNLVTYNAILGGFSR 656
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+ EA L +M + + P + I G+ N+++A R D+M++ G VP+
Sbjct: 657 HGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 193/456 (42%), Gaps = 84/456 (18%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLM---------SDMEEPND---------------VT 149
PN I TLIH L ++ K+ A+SL+ S +E + V
Sbjct: 97 PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156
Query: 150 FSILICAYCKEENL---VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
F +LI Y + L A LL K GF + +L + VG V A ++ E
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKR---GFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 207 ESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ + G + GK+ +L EME KG ++ TYN L+++YC G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM------------- 297
++ A + + M G+ TY+ LI GLC G + ++L M
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 298 ---------EDSKEGSK-----------GRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
ED E + + ++S++ R + AL Y ++M+
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
L P V ++ I G+C + +V A + ++M+E G V +VV Y+ L++ C+ + + +A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL KEM G P T T++ G C+ GN+ AL L E R P Y+ L
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTL---RSLKPDVVTYNTL 510
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ C+ G + A L M+ + I P Y++++ L+
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 326 EALEYLKQMEKLFPRAVDRSLKILGFCVD-GNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
EA + L++ + F +++ +LG V G V+ A + ++ ++ G + NV + +++
Sbjct: 175 EAFQLLRK--RGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVN 232
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
A C++ ++ + EM G T+NT+++ CR+G V A LV+ G+G
Sbjct: 233 ALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVD---CMAGKG 289
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLL 503
PG Y+ LI LC++G ++ A +L +M+G G+ P+ T+N +L+ ++ W
Sbjct: 290 LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAE 349
Query: 504 LLLNEMVS 511
+ NEM+
Sbjct: 350 RVFNEMLQ 357
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 227/471 (48%), Gaps = 30/471 (6%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
I+D + + + R N PS+ F L + K+ + +M GV + Y+ +
Sbjct: 77 IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---- 142
L+ LC + V ++ M G++P+++ +NTLI+ LC GK+ A L ++M
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
EPN ++++ +I CK N + A+ + K P+VVT +++ LC V +AV
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E FL EM +G P+V TYN ++ +C G L+ A +F +M
Sbjct: 257 E-------------------FLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + VT++ L+ GLC G + + + + M +++G++ YN+++ G N
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM--TEKGAEPNAYTYNALMDGYCLHN 355
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
Q DEA++ L M + P ++ I G+C + +AKR +M E+ P+ V Y
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYS 415
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ CQ R REA L KEM G LP ++ +L G C+ G++ ALKL++E
Sbjct: 416 TLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHE- 474
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R P Y+ LI+ + G + A L ++ GI PD T+N ++
Sbjct: 475 --RRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 214/434 (49%), Gaps = 27/434 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL I + V + + P++ +N++++ L K +
Sbjct: 164 PDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRV 223
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM + + + TY ++ LC V + + L M RG+ P+ V YNT++H C
Sbjct: 224 FRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCS 283
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L +M P+ VTF+IL+ CKE + A + E G P+ T
Sbjct: 284 LGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYT 343
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C ++ +A+++L G + G KGC PN+ +YNILI+
Sbjct: 344 YNALMDGYCLHNQMDEAIKVL---------GIMIG----------KGCAPNLSSYNILIN 384
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC++ ++ A + ++M ++ + VTY TL++GLC GR + L + + M S G
Sbjct: 385 GYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSS--GL 442
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ +L G + DEAL+ LK+M ++ P + ++ I G + G +E AK
Sbjct: 443 LPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKE 502
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ +G P++ Y+ +I +E EA E ++M G+LP + ++N ++ G
Sbjct: 503 LFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFL 562
Query: 423 RQGNVGTALKLVEE 436
+ + TA++L++E
Sbjct: 563 QNQDSSTAIQLIDE 576
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 160/332 (48%), Gaps = 27/332 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PPD + T++ G +N+ + ++V R N+ P FN ++D L KE +
Sbjct: 268 PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR-NVMPDTVTFNILVDGLCKEGMVSEAR 326
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M G + + YTY LM G CL N++ + K+L +M +G PN YN LI+
Sbjct: 327 CVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGY 386
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ ++ A+ L+S+M E P+ VT+S L+ C+ AL L ++ S G +PD+
Sbjct: 387 CKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDL 446
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ + +L+ C G + +A+ + LKEM + PN+ Y IL
Sbjct: 447 MAYSILLDGFCKHGHLDEAL-------------------KLLKEMHERRIKPNIILYTIL 487
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I G L+ A ++F+ + DGI + TY+ +I+GL G D+ + + MED +
Sbjct: 488 IRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMED--D 545
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G YN ++ G + A++ + +M
Sbjct: 546 GFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 40/274 (14%)
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M+ G NV + N+LI+ C +D A+ V M GI + +T++TLI GLC+ G
Sbjct: 121 QMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEG 180
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
+I + + + M S G + + YN+V+ GL
Sbjct: 181 KIKEAVGLFNEMVWS--GHEPNVISYNTVINGL--------------------------- 211
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
C +GN A R F +M + G PNVV Y+ +I + C++ V EA E + EM
Sbjct: 212 ------CKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDR 265
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+NT+L G C G + A +L +E +GR +P + ++ L+ LC++G
Sbjct: 266 GIPPDVVTYNTILHGFCSLGQLNEATRLFKE---MVGRNVMPDTVTFNILVDGLCKEGMV 322
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
A + M KG P+ T+N+L+ CL Q
Sbjct: 323 SEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ 356
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D +++DA F +M+ P+VV + + + ++++ A L +M G +
Sbjct: 74 DISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYS 133
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
N +++ LCR +V A+ ++ + + G P + ++ LI LC +G + A L
Sbjct: 134 LNVLINCLCRLSHVDFAVSVMGKMFK---LGIQPDAITFNTLINGLCNEGKIKEAVGLFN 190
Query: 474 QMVGKGILPDYLTWNSLL 491
+MV G P+ +++N+++
Sbjct: 191 EMVWSGHEPNVISYNTVI 208
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 236/515 (45%), Gaps = 34/515 (6%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP F ++ + + + V ++ + F + P + N +++ + L
Sbjct: 63 MHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLN-RLG 121
Query: 65 RAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
AF K++ G Q D T+ L++GLC+ ++GD L M G +PN V Y TLI
Sbjct: 122 FAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 181
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ LCK G A L+ ME +P+ V ++ +I + CK+ + A L K G
Sbjct: 182 NGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGIS 241
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD+ T T ++ LC+ L + K L +M +P+V +
Sbjct: 242 PDIFTYTSLIHSLCN-------------------LCEWKHVTTLLNQMINSKIMPDVVIF 282
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ ++ + C+ G + A DV + M I G+ N VTY+ L+ G C +D+ +K+ M
Sbjct: 283 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM-- 340
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
G + YN+++ G + + D+A ++M ++L P V + ++ C G +
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN-TLMHXCHVGRL 399
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+DA F +M+ G +P++ Y L+ C++ + EA L+K + G P + V
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G+CR G + A + +G P Y+ +I LC +G A+ L ++M G
Sbjct: 460 IDGMCRAGELEAARDIFSNLS---SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516
Query: 478 KGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
G PD T+N++ L Q L + LL EM++
Sbjct: 517 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLA 551
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 230/489 (47%), Gaps = 66/489 (13%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L FN+I++ + + + ++A G D +TY L+ GL ++ L
Sbjct: 123 PNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHL 182
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------------------- 144
L M+ V+PN V+Y+ LI LCK+G V A L S + E
Sbjct: 183 LQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCS 242
Query: 145 --------------------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
P+D TF+ILI A CKE ++ A +L G PD+VT
Sbjct: 243 VGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVT 302
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++E CS V +A E+ M ++G P+V YN+LI
Sbjct: 303 YNALMEGYCSRENVHEAREL-------------------FNRMVKRGLEPDVLNYNVLID 343
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+T ++D A+ +F ++ + +Y++LI GLC+ GRI K+L M S +
Sbjct: 344 GYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YN ++ L +E + EAL L M K + P V + + G+C+ NV AK
Sbjct: 404 D--VVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKD 461
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F++M++ G P+++ Y+ LI+ YC+ E V EA L KEM +P +++N+++ GLC
Sbjct: 462 IFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC 521
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G + +L++E G P Y+ L+ A C+ F A L Q+V +GI P
Sbjct: 522 NLGRIPHVQELLDE---MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWP 577
Query: 483 DYLTWNSLL 491
D+ T ++++
Sbjct: 578 DFYTNHAIV 586
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 208/435 (47%), Gaps = 33/435 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM+ V DDYT+ IL+ LC R+ + +L +M RG KP+ V YN L+ C
Sbjct: 255 KMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRE 314
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V AR L + M EP+ + +++LI YCK + + A+VL ++ + VP + +
Sbjct: 315 NVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYN 374
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC+ GR+ VK + L EM P+V TYNILI +
Sbjct: 375 SLIDGLCN----------------SGRISHVK---KLLDEMHGSAQPPDVVTYNILIDAL 415
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + AL V M G+ N VTY+ ++ G C ++ I M K G +
Sbjct: 416 CKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRM--VKSGLEP 473
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN ++ G + DEA+ K+M + L P + I G C G + +
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELL 533
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M + G P+V+ Y+ L+ A+C+ + +A L +++ G P T + ++ LC+
Sbjct: 534 DEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCK- 591
Query: 425 GNVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G LK+ E+ ++ + G P Y+ LI ALC+ G F A +LL +M PD
Sbjct: 592 ---GEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPD 648
Query: 484 YLTWNSLLICLSQQT 498
+T+ ++ L Q+
Sbjct: 649 AITFEIIIGVLLQRN 663
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 205/422 (48%), Gaps = 27/422 (6%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
C V D + M P + +++ L+ ++ + G A SL + ++ P+
Sbjct: 31 CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
TF+ILI Y + + A LL G+ P++VT ++ C G + A++ +
Sbjct: 91 ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150
Query: 208 SGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
QG L G++K L+EME+ PN+ Y+ LI C+ G
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ AL + + + GI + VTY++LI G CS GR + ++L M +E +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM--VRENVDPDDYTF 268
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ L +E + EA L M K P V + + G+C NV +A+ F++M++
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+V+ Y+ LI YC+ + V EA L KE+ +P +++N+++ GLC G +
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISH 388
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
KL++E M G + P Y+ LI ALC++G A +LV M+ KG+ P+ +T+N+
Sbjct: 389 VKKLLDE-MHGSAQP--PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 490 LL 491
++
Sbjct: 446 MM 447
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 205/456 (44%), Gaps = 26/456 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + ++I G +V + + R N+ P FN ++D L KE L
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL 288
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G + D TY LM+G C V + +L + M RG++P+ + YN LI CK
Sbjct: 289 AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
V A L ++ P +++ LI C + + LL++ PDVVT
Sbjct: 349 KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTY 408
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMER 229
+++ LC GR+++A+ +L ++G + G C M +
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P++ YN+LI+ YC+T ++D A+ +F +M+ + + +Y++LI GLC+ GRI
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKI 348
++L M DS G + YN +L + D+A+ +Q+ E ++P +
Sbjct: 529 VQELLDEMCDS--GQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIV 586
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C ++ A+ ++ G PNV Y LI+A C++ EA L+ +M +
Sbjct: 587 DNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRP 646
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
P A TF ++ L ++ A KL EE I RG
Sbjct: 647 PDAITFEIIIGVLLQRNETDKAEKLREE---MIARG 679
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 161/402 (40%), Gaps = 86/402 (21%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + + ++I GL + I+ V K D + P + +N ++D L KE L
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
MM GV+ + TY +M G CL N V + + M G++P+ + YN LI+ CK
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCK 487
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
V A L +M N +PD+ + +
Sbjct: 488 TEMVDEAIVLFKEMRHKN-------------------------------LIPDIASYNSL 516
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ LC++GR+ E+L+E + G+ P+V TYNIL+ ++C+
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQ-------------------SPDVITYNILLDAFCK 557
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
T D A+ +F + ++GI +F T ++ LC G + L++ ED
Sbjct: 558 TQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEK-------LKMAED--------- 600
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
AL++L M P ++ I C DG+ +A +M
Sbjct: 601 ------------------ALKHL-LMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKME 641
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+ P+ + ++ +I Q +A +L +EM G + I
Sbjct: 642 DNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNI 683
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 263/560 (46%), Gaps = 73/560 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD S F +I+ L RA + + + + + + P K F +I+ ++E D+D A
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSL 126
R++M+ G + + +++ G C RV D + M ++ G P+ +NTL++ L
Sbjct: 247 -REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G V A +M M +P+ T++ +I CK + A+ L++ + P+
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNT 365
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT ++ LC +V +A E L +V + KG LP+V T+N L
Sbjct: 366 VTYNTLISTLCKENQVEEATE----------LARV---------LTSKGILPDVCTFNSL 406
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C T A+++F +M+ G + TY+ LI LCS G++D+ L +L+ ME S
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS-- 464
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+++ G + N+ EA E +ME + +V + I G C VEDA
Sbjct: 465 GCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ DQMI EG P+ Y+ L+ +C+ +++A+++++ MT +G P T+ T++SG
Sbjct: 525 SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 421 LCRQGNVGTALKLVEE-DMRGIG--------------------------------RGSLP 447
LC+ G V A KL+ M+GI + P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAP 644
Query: 448 GSGHYSPLIKALCEKGG-FQSASMLLVQMVGKGILPDYLTWNSL---LICLSQQTTWLLL 503
+ Y + + LC GG + A LV+++ KG +P++ + L L+ LS + T
Sbjct: 645 DAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET---- 700
Query: 504 LLLNEMVSFVMVVHELSAKE 523
L ++V+ VM S +E
Sbjct: 701 --LVKLVNMVMQKARFSEEE 718
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 242/501 (48%), Gaps = 39/501 (7%)
Query: 12 SIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKED----IDLARA 66
S F+ +I + + ++++ ++ F + P +N +L++LV + +++A A
Sbjct: 119 SPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHA 178
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
KM G++ D T+ +L+K LC +++ +L M S G+ P+ + T++
Sbjct: 179 ----KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGY 234
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLL-EKSFSFGFVPD 181
+ G + A + M E ++V+ ++++ +CKE + +AL + E S GF PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
T ++ LC G V A+EI++ ++G +LG+VK FL
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLD 354
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M + C PN TYN LIS+ C+ ++ A ++ + GI + T+++LI+GLC
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVD 343
+++ + M +G + YN ++ L + + DEAL LKQME +
Sbjct: 415 NHRVAMELFEEMR--SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I GFC + +A+ FD+M G N V Y+ LI C+ RV +AS+LM +M
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P T+N++L+ CR G++ A +V+ G P Y LI LC+ G
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQA---MTSNGCEPDIVTYGTLISGLCKAG 589
Query: 464 GFQSASMLL--VQMVGKGILP 482
+ AS LL +QM G + P
Sbjct: 590 RVEVASKLLRSIQMKGIALTP 610
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 205/405 (50%), Gaps = 35/405 (8%)
Query: 98 GDGFKLLHVMKSR----GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
G+ KL+ + ++ G+KP+ +N LI +LC+ ++ A ++ DM P++ T
Sbjct: 167 GNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ ++ Y +E +L AL + E+ FG V++ ++ C GRV DA+ ++E
Sbjct: 227 FTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
Q G P+ T+N L++ C+ G + A+++ + M +G
Sbjct: 287 NQ------------------DGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ TY+++I GLC G + + ++ L M +++ S ++ YN+++ L +ENQ +EA E
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQM-ITRDCSPNTVT-YNTLISTLCKENQVEEATE 386
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+ + + P + I G C+ N A F++M +G P+ Y+ LI + C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSL 446
+ ++ EA ++K+M G T+NT++ G C+ + A ++ +E ++ G+ R S+
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSV 506
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI LC+ + AS L+ QM+ +G PD T+NSLL
Sbjct: 507 T----YNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 188/408 (46%), Gaps = 29/408 (7%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
K P +Y ++ L ++G R ++ DM+ E F ILI +Y + E
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQ 134
Query: 164 VNALVLLEKSFS-FGFVPDVVTITKVLELLCSVGRVMDAVEILEES----GEQGRLGK-- 216
L ++ FG PD ++L LL G + VEI G + +
Sbjct: 135 DEILGVVHWMIDDFGLKPDTHFYNRMLNLLVD-GNNLKLVEIAHAKMSVWGIKPDVSTFN 193
Query: 217 --VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+K CR L++M G +P+ T+ ++ Y E G LD AL + M
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEF 253
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G SW+ V+ + ++ G C GR++D L +Q M + ++G +N+++ GL +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN-QDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 326 EALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A+E + M E P + I G C G V++A DQMI PN V Y+ LI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLI 372
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
C+E +V EA+EL + +T G LP TFN+++ GLC N A++L EE MR +
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE-MR--SK 429
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ LI +LC KG A +L QM G +T+N+L+
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 151/292 (51%), Gaps = 13/292 (4%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-GISWN 270
GR G + L++M+ GC + ILI SY + + D L V + M D G+ +
Sbjct: 94 GRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPD 153
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMED--SKEGSKGRISPYNSVLYGLYRENQQDEAL 328
Y+ ++ L G + LK++++ S G K +S +N ++ L R +Q A+
Sbjct: 154 THFYNRMLNLLVDG----NNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L+ M L P + + G+ +G+++ A R +QM+E G + V + ++H +
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 387 CQEERVREASELMKEMTGH-GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+E RV +A ++EM+ G+ P TFNT+++GLC+ G+V A+++++ ++ G
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ---EGY 326
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P Y+ +I LC+ G + A L QM+ + P+ +T+N+L+ L ++
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378
>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
Length = 897
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 232/493 (47%), Gaps = 26/493 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M H + PP F R L R ++ + ++R P ++ +++ L +
Sbjct: 149 MVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQG 208
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
A +M+ G D T+ +++G+C RV + +L+ M ++G P + Y
Sbjct: 209 GVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYG 268
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L+ LC+ + AR+++ + E N V F+ +I E L A L E G P
Sbjct: 269 FLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQP 328
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T + ++ LC +GR+ AV R L+EME+KG PNV TY
Sbjct: 329 DAHTYSILMHGLCKLGRIGSAV-------------------RLLREMEKKGFAPNVVTYT 369
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
I++ S+C+ G+ D + +M G++ N Y+ +I LC GR+D+ + ++Q M
Sbjct: 370 IVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS- 428
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+G I YN+++Y L Q +EA + + E + + + I DG +
Sbjct: 429 -QGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 487
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA R +MI G +VV Y+ LI A C++ V + L++EM G P ++N ++
Sbjct: 488 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILI 547
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
S LC++ V AL+L ++ + +G P Y+ LI LC+ G +A LL ++ +
Sbjct: 548 SELCKERRVRDALELSKQM---LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 604
Query: 479 GILPDYLTWNSLL 491
+ PD +T+N L+
Sbjct: 605 NVHPDIITYNILI 617
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/444 (29%), Positives = 223/444 (50%), Gaps = 23/444 (5%)
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A YR+ + V +T+ + + LC R + LL M G P++V+Y T+IH+
Sbjct: 144 ALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHA 203
Query: 126 LCKNGKVGRARSLMSD---MEEPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC G V A +L+++ M DV TF ++ C + A L+++ + G +P
Sbjct: 204 LCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPG 263
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG--RLGKVKGGC----------RFLKEMER 229
V+T +L+ LC V + +A +L E V GGC + M
Sbjct: 264 VMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGL 323
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
KGC P+ TY+IL+ C+ G + SA+ + +M+ G + N VTY ++ C G DD
Sbjct: 324 KGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDD 383
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
+L+ M S +G YN ++Y L ++ + DEA+ +++M + P +
Sbjct: 384 TRALLEEM--SAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTI 441
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I C + +E+A+ F+ ++EEG V N + Y+ +IHA ++ R ++A L KEM HG
Sbjct: 442 IYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGC 501
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
++N ++ +C+ GNV +L L+EE +G P + Y+ LI LC++ +
Sbjct: 502 SLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE---KGIKPNNVSYNILISELCKERRVRD 558
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L QM+ +G+ PD +T+N+L+
Sbjct: 559 ALELSKQMLNQGLAPDIVTYNTLI 582
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 163/367 (44%), Gaps = 24/367 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
PD + ++ GL + I V+ + + P++ + +L K + D RA
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 387
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M A G+ + Y ++ LC R+ + L+ M+S+G P+ YNT+I+ LC
Sbjct: 388 L-EEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 446
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
N ++ A + ++ E N +T++ +I A ++ +A+ L ++ G DVV
Sbjct: 447 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVV 506
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ +++ +C G V ++ +LEE E+G + +V+ K+M
Sbjct: 507 SYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQM 566
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G P++ TYN LI+ C+ G + +AL++ + + + + +TY+ LI C +
Sbjct: 567 LNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLL 626
Query: 288 DDGLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
DD +L + G + + + LY + D+ L ++ P DR
Sbjct: 627 DDAAMLLNRAMAAVCPVGDRRIMQILPDKNFKLYLHTKGDDFQHSLGCVKPSCPAGKDRC 686
Query: 346 LKILGFC 352
+ G C
Sbjct: 687 ERKTGRC 693
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 135/327 (41%), Gaps = 44/327 (13%)
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
S QG L + + + + + R P T+ + + C G D AL + M G
Sbjct: 131 SASQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGC 190
Query: 268 SWNFVTYDTLI-----------------------------------RGLCSGGRIDDGLK 292
+ V Y T+I RG+C GR+ + +
Sbjct: 191 VPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAAR 250
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFC 352
++ M +G + Y +L GL R Q DEA L ++ +L V + I G
Sbjct: 251 LVDRM--MTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPEL--NVVLFNTVIGGCL 306
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+G + +A ++ M +G P+ Y L+H C+ R+ A L++EM G+ P
Sbjct: 307 AEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVV 366
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+ VL C+ G L+EE +G S Y+ +I ALC+ G A L+
Sbjct: 367 TYTIVLHSFCKNGMWDDTRALLEEMS---AKGLTLNSQGYNGMIYALCKDGRMDEAMGLI 423
Query: 473 VQMVGKGILPDYLTWNSLL--ICLSQQ 497
+M +G PD ++N+++ +C ++Q
Sbjct: 424 QEMRSQGCNPDICSYNTIIYHLCNNEQ 450
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 241/518 (46%), Gaps = 65/518 (12%)
Query: 39 RFNMTPSLKIFNSILDVLVKEDIDLARAFYR--KKMMASGVQGDDYTYAILMKGLCLTNR 96
R ++ PSL+ N++L L + +A + ++A + + YT+ +L+ C
Sbjct: 166 RGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGT 225
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
+ D L M+ G+ P+ V YNTL+ + C+ G +G AR+L++ M++ P T++
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV-------------- 198
L+ AY + + A ++E +FGF PD+ T + LC G+V
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345
Query: 199 ----------------------MDAVEILEESGEQGRLGK-------VKGGCR------- 222
DA+ +LEE ++G VKG CR
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405
Query: 223 --FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
LK M +G P+V TYN LI +YC+ + A + ++M G+ + T +TL+
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYN 465
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
LC R ++ ++L+ + G Y +V+ ++EN+ + AL +M KL
Sbjct: 466 LCKEKRYEEAEELLR--SPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLT 523
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + I G C G + +A ++++++G VP+ Y+ +IHAYC+E + +A +
Sbjct: 524 PSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQF 583
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+M + + P T NT+++GLC G + A+KL E +G Y+ LI+A
Sbjct: 584 HNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFES---WAEKGKKVDVITYNTLIQA 640
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
LC+ G +A M +G+ PD T+N +L LS+
Sbjct: 641 LCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSE 678
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 235/524 (44%), Gaps = 63/524 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + + T++ R I + ++ F P L +N + L + +D A
Sbjct: 278 PTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 337
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ S V D TY L+ R D LL M+ +GVK + V +N ++ LC
Sbjct: 338 KDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLC 397
Query: 128 KNGKV----GRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ GR + + + P+ +T++ LI AYCK N+ A VL+++ G D
Sbjct: 398 REGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTF 457
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T+ +L LC R +A E+L + ++G +P+ +Y ++
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELL-------------------RSPPQRGFVPDEVSYGTVM 498
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKE 302
++Y + + AL ++++M ++ + TY+TLI+GLC+ G++ + + K+ +LM K+
Sbjct: 499 AAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELM---KK 555
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDA 360
G + YN +++ +E ++A ++ +M E F P V + + G C+ G +E A
Sbjct: 556 GLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKA 615
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F+ E+G +V+ Y+ LI A C++ V A +M G P A T+N VLS
Sbjct: 616 IKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSA 675
Query: 421 LCRQGNVGTA---LKLVEEDMRGIGRGSLP---------------------GSG------ 450
L G A L ++E + R S P SG
Sbjct: 676 LSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGG 735
Query: 451 ---HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +K LC G + A +L +M+ KG+ D T+ +L+
Sbjct: 736 DQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLM 779
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 206/475 (43%), Gaps = 61/475 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNM-TPSLKIFNSILDVLVKEDIDLARAF 67
PD + + GL +A +++ K D + ++ +P + +N+++D K
Sbjct: 313 PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALN 372
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M GV+ T+ I++KGLC ++ + L +M G+ P+ + YNTLI + C
Sbjct: 373 LLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYC 432
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V +A LM +M + T + L+ CKE+ A LL GFVPD V
Sbjct: 433 KARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEV 492
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ V+ + A+ + +E ++ +GK+ L E+
Sbjct: 493 SYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNEL 552
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+KG +P+ TYNI+I +YC+ G L+ A N M + + VT +TL+ GLC G++
Sbjct: 553 MKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKL 612
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ +K+ + +++G K + YN+++ L ++ D AL + ME L P A +
Sbjct: 613 EKAIKLFESW--AEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYN 670
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY--------------------DC---- 381
+ + G E+A+ ++ E G + Y DC
Sbjct: 671 VVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGG 730
Query: 382 ------------LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ C +++EA ++ EM G +ST+ T++ GL ++
Sbjct: 731 NAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKR 785
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 134/273 (49%), Gaps = 14/273 (5%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN T+N+L+ ++C G L AL + M+ G+S + VTY+TL++ C G + + +
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGF 351
L M+ KEG + YN+++ R +A ++ M P ++ G
Sbjct: 268 LARMK--KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325
Query: 352 CVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G V++A + D+M V P+VV Y+ L+ A + +R +A L++EM G
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385
Query: 411 ASTFNTVLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T N V+ GLCR+G + AL K++ E+ G P Y+ LI A C+
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEE------GLAPDVITYNTLIDAYCKARNVAK 439
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A +L+ +MV G+ D T N+LL L ++ +
Sbjct: 440 AFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRY 472
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 17/232 (7%)
Query: 305 KGRISP----YNSVLYGLYRE--NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+G + P N+VL L R +L+ + + +L P +L + C G
Sbjct: 166 RGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGT 225
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ DA M G P+VV Y+ L+ A+C++ + EA L+ M G P +T+NT
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++S R G + A +VE M G P Y+ L LC+ G A L +M
Sbjct: 286 LVSAYARLGWIKQATNVVEA-MTAFGFE--PDLWTYNVLAAGLCQAGKVDEAFKLKDEME 342
Query: 477 GKGIL-PDYLTWNSLL-ICLSQQTTWLLLLLLNEM----VSFVMVVHELSAK 522
I+ PD +T+N+L+ C Q + L LL EM V +V H + K
Sbjct: 343 HLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVK 394
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 154/608 (25%), Positives = 274/608 (45%), Gaps = 104/608 (17%)
Query: 12 SIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
S F+ +I + + ++++ D ++ F + P +N +L++LV +
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA 178
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN--------------- 115
KM G++ D T+ +L+K LC +++ +L M S G+ P+
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 116 --------------------SVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTF 150
+V N ++H CK G+V A + + +M P+ TF
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ CK ++ +A+ +++ G+ PDV T V+ LC +G V +AVE+L++
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
+ + +V+ + + KG LP+V T+N LI C T
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+++F +M+ G + TY+ LI LCS G++D+ L +L+ ME S G + YN++
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS--GCARSVITYNTL 476
Query: 315 LYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ G + N+ EA E +ME + +V + I G C VEDA + DQMI EG
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P+ Y+ L+ +C+ +++A+++++ MT +G P T+ T++SGLC+ G V A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 433 LVEE-DMRGIG--------------------------------RGSLPGSGHYSPLIKAL 459
L+ M+GI + P + Y + + L
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 460 CEKGG-FQSASMLLVQMVGKGILPDYLTWNSL---LICLSQQTTWLLLLLLNEMVSFVMV 515
C GG + A LV+++ KG +P++ + L L+ LS + T L ++V+ VM
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET------LVKLVNMVMQ 710
Query: 516 VHELSAKE 523
S +E
Sbjct: 711 KARFSEEE 718
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 194/417 (46%), Gaps = 31/417 (7%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
K P +Y ++ L ++G + ++ DM+ E TF ILI +Y + E
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 164 VNALVLLEKSF-SFGFVPDVVTITKVLELLCSVGRVMDAVEILEES----GEQGRLGK-- 216
L +++ FG PD ++L LL G + VEI G + +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFN 193
Query: 217 --VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+K CR L++M G +P+ T+ ++ Y E G LD AL + M
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G SW+ V+ + ++ G C GR++D L +Q M + ++G +N+++ GL +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN-QDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 326 EALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A+E + M E P + I G C G V++A DQMI PN V Y+ LI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
C+E +V EA+EL + +T G LP TFN+++ GLC N A++L EE MR +
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE-MR--SK 429
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
G P Y+ LI +LC KG A +L QM G +T+N+L+ C + +T
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 240/508 (47%), Gaps = 29/508 (5%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
+F ++R +AR + + +A ++ + S+ NS+L LVK +DLA Y ++
Sbjct: 290 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY-QE 348
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ SGVQ + YT I++ LC ++ + L M+ +GV P+ V YNTLI++ C+ G
Sbjct: 349 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 408
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A LM M +P T++ +I CK + A +L++ G PD T
Sbjct: 409 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 468
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKV-----------KGGC-----RFLKEMERKG 231
+L C +MDA I +E QG + + K GC ++ ++M+ G
Sbjct: 469 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 528
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+ Y ILI +C GV+ AL V ++M G + VTY+T++ GLC + +
Sbjct: 529 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEAD 588
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
++ M ++ G + +++ G ++ ++A+ + M L P V + I
Sbjct: 589 ELFTEM--TERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 646
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC +E ++ MI PN + Y LI+ YC V EA L EM G+
Sbjct: 647 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 706
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T NT++ G CR GN A+K E + +G +P Y+ LI ++ A
Sbjct: 707 TIITCNTIVKGYCRAGN---AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 763
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ +M G+LPD +T+N +L S+Q
Sbjct: 764 ALVNKMENSGLLPDVITYNVILNGFSRQ 791
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 223/483 (46%), Gaps = 34/483 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I R ++ + + D +S + P + +N+I++ L K L
Sbjct: 391 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 450
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+ D TY IL+ C + + D ++ M S+GV P+ V ++ LI L K
Sbjct: 451 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 510
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + +A DM+ P++V ++ILI +C+ + AL + ++ G DVVT
Sbjct: 511 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVT 570
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+L LC + +A E+ EM +G P+ T+ LI+
Sbjct: 571 YNTILNGLCKEKMLSEADEL-------------------FTEMTERGVFPDFYTFTTLIN 611
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED--SKE 302
Y + G ++ A+ +F M + + VTY+TLI G C G ++ K+ +L D S+
Sbjct: 612 GYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME---KVNELWNDMISRR 668
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GFCVDGNVEDA 360
IS Y ++ G EA +M EK F + I+ G+C GN A
Sbjct: 669 IYPNHIS-YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 727
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M+ +G VP+ + Y+ LI+ + +EE + A L+ +M G LP T+N +L+G
Sbjct: 728 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 787
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
RQG + A ++ ++ I RG P Y+ LI + + A + +M+ +G
Sbjct: 788 FSRQGRMQEAELIM---LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 844
Query: 481 LPD 483
+PD
Sbjct: 845 VPD 847
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 221/474 (46%), Gaps = 47/474 (9%)
Query: 41 NMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQ----------------GDDYT 83
N SL+ F++++ +LV+ + A+A + + SGV +
Sbjct: 231 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLV 290
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L++ ++ +G + V+KS+G+ + N+L+ L K G V A + ++
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ N T +I+I A CK + + N L G PDVVT ++ C G
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG--- 407
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+LEE+ E + M KG P V TYN +I+ C+TG A V
Sbjct: 408 ----LLEEAFE------------LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 451
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M G+S + TY+ L+ C + D +I M +G + +++++ L
Sbjct: 452 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM--PSQGVVPDLVSFSALIGLLS 509
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ D+AL+Y + M+ L P V ++ I GFC +G + +A + D+M+E+G +VV
Sbjct: 510 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVV 569
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ +++ C+E+ + EA EL EMT G P TF T+++G + GN+ A+ L E
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFE-- 627
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I R P Y+ LI C+ + + L M+ + I P+++++ L+
Sbjct: 628 -MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 680
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 150/560 (26%), Positives = 239/560 (42%), Gaps = 92/560 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PDE + +I G R I+D V+ D + R + +L I NS+++ K +I A
Sbjct: 330 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 389
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ ++ D Y+Y L+ G C + F L M G++P + YNTL+ LC
Sbjct: 390 I-TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 448
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + M + P++V +S L+ K EN A L + + GF +
Sbjct: 449 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 508
Query: 184 TITKVLELLCSVGRVMDAVEILEE----------------------SGEQGRLGKVKGGC 221
T ++ LC +G++++A EI ++ + G+ KVKG
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Query: 222 R-----------------------------FLKEMERKGCLPNVDTYNILISSYCETGVL 252
L EM +G PN+ TY LI +C+ G+L
Sbjct: 569 EREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGML 628
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------------ 300
D A + +M +G+S N + T++ GL GRID+ ++Q M D
Sbjct: 629 DKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKS 688
Query: 301 --------------KEGSKGRISP----YNSVLYGLYRENQQDEALEYLK--QMEKLFPR 340
E K + P YN + GL + + D+A + ++ P
Sbjct: 689 DIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPD 748
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
I G+ GNV++A R D+M+ G VPN+V Y+ LI+ C+ E V A L
Sbjct: 749 NFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFH 808
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ G P T+NT++ G C+ GN+ A KL + + I G P YS LI LC
Sbjct: 809 KLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKD---KMIEEGISPSVVTYSALINGLC 865
Query: 461 EKGGFQSASMLLVQMVGKGI 480
+ G + + LL QM+ G+
Sbjct: 866 KHGDIERSMKLLNQMIKAGV 885
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 228/492 (46%), Gaps = 28/492 (5%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
++F +++ + + + D + + PSL+ NS+L+ LVK + ++
Sbjct: 157 TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 216
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D + +I++ C +V + + M++ GV+PN V Y++LI+ G
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276
Query: 132 VGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNA-LVLLEKSFSFGFVPDVVTIT 186
V A+ ++ M E N VT+++LI YCK+ + A VL VPD
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRFLKEMERKGCL------ 233
+++ C G++ DAV +L+E G + G C+ + E +G +
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396
Query: 234 ---PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+ +YN L+ YC G A ++ + M +GI +TY+TL++GLC G DD
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYR-ENQQDEALEYLKQMEKLFPRA-VDRSLKI 348
L+I LM K G Y+++L GL++ EN + + + + + F ++ + + I
Sbjct: 457 LQIWHLM--MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G + +A+ FD+M + G P+ + Y LI YC+ V +A ++ M
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS 574
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +N+++SGL + + L+ E GI RG P Y LI C++G A
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEVTDLLTE--MGI-RGLTPNIVTYGALIDGWCKEGMLDKA 631
Query: 469 SMLLVQMVGKGI 480
+M G+
Sbjct: 632 FSSYFEMTENGL 643
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 204/447 (45%), Gaps = 23/447 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PDE + T++ GL + D+++R T S FN+++ L K +
Sbjct: 470 PDEVGYSTLLDGLFKMENFEGASTLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEE 528
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G D TY L+ G C + VG FK+ M+ + P+ +YN+LI L
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 588
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ ++ L+++M PN VT+ LI +CKE L A + G +++
Sbjct: 589 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 648
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------------RLGKVKGGCRFLKEMERK 230
+ ++ L +GR+ +A ++++ + G R ++ L E +
Sbjct: 649 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 708
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
LPN YNI I+ C+TG +D A F+ + + G + TY TLI G + G +D+
Sbjct: 709 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 768
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
++ M + G I YN+++ GL + D A ++ + LFP V + I
Sbjct: 769 FRLRDEM--LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 826
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G+C GN++ A + D+MIEEG P+VV Y LI+ C+ + + +L+ +M G
Sbjct: 827 DGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVD 886
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVE 435
+ T++ G R G + KL +
Sbjct: 887 SKLIEYCTLVQGYIRSGEMQKIHKLYD 913
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 206/435 (47%), Gaps = 40/435 (9%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V DD A+L + L L GF V K + +PN Y L+H L + R
Sbjct: 65 VFSDDIVDAVL-RNLRLNPTASLGF-FQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETR 122
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLV-NALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+ ++ + + +C + N++ + LV + + F+F P V + +L++
Sbjct: 123 AYLNQLVD---------LCKFKDRGNVIWDELVGVYREFAFS--PTVFDM--ILKVYVEK 169
Query: 196 GRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTY 239
G +A+ + + G+ GR+ G+ ++M R G +P+V
Sbjct: 170 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 229
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+I+++++C+ G +D A M+ G+ N VTY +LI G S G ++ +L+ M
Sbjct: 230 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM-- 287
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGN 356
S++G + Y ++ G ++ + DEA + L+ M++ L P + I G+C G
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 347
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++DA R D+M+ G N+ I + LI+ YC+ + EA ++ M P + ++NT
Sbjct: 348 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 407
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L G CR+G+ A L ++ ++ G P Y+ L+K LC G F A + M+
Sbjct: 408 LLDGYCREGHTSEAFNLCDKMLQ---EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 464
Query: 477 GKGILPDYLTWNSLL 491
+G+ PD + +++LL
Sbjct: 465 KRGVAPDEVGYSTLL 479
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
++ Y I + GLC T +V D + ++ +G P++ Y TLIH G V A L
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 772
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+M PN VT++ LI CK EN+ A L K G P+VVT +++ C +
Sbjct: 773 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G MDA L++ +M +G P+V TY+ LI+ C+ G ++ +
Sbjct: 833 GN-MDAAFKLKD------------------KMIEEGISPSVVTYSALINGLCKHGDIERS 873
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
+ + N M G+ + Y TL++G G + K+ +M
Sbjct: 874 MKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMH 916
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 35/170 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + T+I G A +++ + D + R + P++ +N++++ L K E++D A+
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRL 806
Query: 68 YRK----------------------------------KMMASGVQGDDYTYAILMKGLCL 93
+ K KM+ G+ TY+ L+ GLC
Sbjct: 807 FHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCK 866
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ KLL+ M GV + Y TL+ ++G++ + L M
Sbjct: 867 HGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDMMH 916
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 213/434 (49%), Gaps = 27/434 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D +Y+ ++ G C + +KL+ VMK +G+KPNS IY ++I LC+ K
Sbjct: 715 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 774
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A S+M P+ V ++ LI +CK ++ A + S PDV+T T
Sbjct: 775 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 834
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C +G +++A ++ E +G + G +K R M + G
Sbjct: 835 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 894
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PNV TY LI C+ G LDSA ++ ++M G+ N TY++++ GLC G I++ +
Sbjct: 895 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K++ E + G Y +++ + + D+A E LK+M + L P V ++ +
Sbjct: 955 KLVGEFEAA--GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC+ G +ED ++ + M+ +G PN ++ L+ YC ++ A+ + K+M G P
Sbjct: 1013 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 1072
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ G C+ N+ A L +E M+ G+G YS LIK ++ F A
Sbjct: 1073 DGKTYENLVKGHCKARNMKEAWFLFQE-MK--GKGFSVSVSTYSVLIKGFLKRKKFLEAR 1129
Query: 470 MLLVQMVGKGILPD 483
+ QM +G+ D
Sbjct: 1130 EVFDQMRREGLAAD 1143
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 30/422 (7%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV + +Y I++ +C R+ + LL +M+ +G P+ + Y+T+++ C+ G++ +
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L+ M+ +PN + +I C+ L A + G +PD V T +++
Sbjct: 744 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C + G ++ +F EM + P+V TY +IS +C+ G
Sbjct: 804 FC-------------------KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A +F++M G+ + VT+ LI G C G + D ++ M + G + Y
Sbjct: 845 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM--IQAGCSPNVVTY 902
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+++ GL +E D A E L +M K L P + + G C GN+E+A + +
Sbjct: 903 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G + V Y L+ AYC+ + +A E++KEM G G P TFN +++G C G +
Sbjct: 963 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
KL+ + +G P + ++ L+K C + ++A+ + M +G+ PD T+ +
Sbjct: 1023 GEKLLN---WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079
Query: 490 LL 491
L+
Sbjct: 1080 LV 1081
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 181/391 (46%), Gaps = 65/391 (16%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
GV N YN +IH +C+ G++ A L+ ME P+ +++S ++ YC+ L
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L+E G P+ ++ LLC + ++ +A E E
Sbjct: 744 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS-------------------E 784
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M R+G LP+ Y LI +C+ G + +A F +M I+ + +TY +I G C G
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 844
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ + K+ M + K +E P +V +
Sbjct: 845 MVEAGKLFHEM--------------------------------FCKGLE---PDSVTFTE 869
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+C G+++DA R + MI+ G PNVV Y LI C+E + A+EL+ EM G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+N++++GLC+ GN+ A+KLV E + G+ ++ Y+ L+ A C+ G
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT----YTTLMDAYCKSGEM 985
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICL 494
A +L +M+GKG+ P +T+N L+ CL
Sbjct: 986 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 1016
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 198/436 (45%), Gaps = 60/436 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ I+ ++I L R + + +A + R + P ++ +++D K DI A F
Sbjct: 757 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 816
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M + + D TY ++ G C + + KL H M +G++P+SV + LI+ C
Sbjct: 817 FYE-MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 875
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A + + M + PN VT++ LI CKE +L +A LL + + G P++
Sbjct: 876 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 935
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC G + +AV++ + E E G + TY L+
Sbjct: 936 TYNSIVNGLCKSGNIEEAVKL-------------------VGEFEAAGLNADTVTYTTLM 976
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+YC++G +D A ++ +M G+ VT++ L+ G C G ++DG K+L M
Sbjct: 977 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML----- 1031
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+KG I+P + L ++ +C+ N++ A
Sbjct: 1032 AKG-IAPNATTFNSLVKQ-----------------------------YCIRNNLKAATAI 1061
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ M G P+ Y+ L+ +C+ ++EA L +EM G G+ ST++ ++ G +
Sbjct: 1062 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 1121
Query: 424 QGNVGTALKLVEEDMR 439
+ A ++ ++ R
Sbjct: 1122 RKKFLEAREVFDQMRR 1137
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 146/301 (48%), Gaps = 22/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +I G +A + D + + + + +P++ + +++D L KE D+D A
Sbjct: 862 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 921
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G+Q + +TY ++ GLC + + + KL+ ++ G+ ++V Y TL+ + C
Sbjct: 922 LHE-MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ +A+ ++ +M +P VTF++L+ +C L + LL + G P+
Sbjct: 981 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040
Query: 184 TITKVLELLCSVGRVMDAVEILEES-----GEQGRLGK--VKGGCR---------FLKEM 227
T +++ C + A I ++ G G+ + VKG C+ +EM
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ KG +V TY++LI + + A +VF+ M+ +G++ + +D G R
Sbjct: 1101 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 1160
Query: 288 D 288
D
Sbjct: 1161 D 1161
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 224/469 (47%), Gaps = 31/469 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ +N++L L + AR F+ M++ GV + YTY IL++ LC + +
Sbjct: 114 PSVLAYNAVLLALSDASLTSARRFF-DSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L M+ G PN V YNTL+ + + G+V A L+ M + PN VTF+ ++ CK
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ +A + ++ G PD V+ ++ C G +A+ +
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSV--------------- 277
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
EM +KG +P+V T+ LI C+ G L+ A+ + M+ G+ N VT+ LI
Sbjct: 278 ----FAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALID 333
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C G +DD L ++ M + K + YN+++ G + DEA E L +ME L
Sbjct: 334 GFCKKGFLDDALLAVRGMRQCR--IKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 391
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S I +C + + A QM+E+G +P+ + Y LI C+E+R+ +A
Sbjct: 392 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHV 451
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L K M G P T+ +++ G C++GNV AL L ++ ++ G LP YS LI
Sbjct: 452 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKA---GVLPDVVTYSVLIN 508
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
L + A LL ++ + +P +++L+ C + +L LL
Sbjct: 509 GLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALL 557
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 227/505 (44%), Gaps = 47/505 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + T++ RA ++ + ++ + P+L FNS+++ + K ++ AR
Sbjct: 183 PNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKV 242
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +MM G+ D +Y L+ G C + + M +G+ P+ V + +LIH +C
Sbjct: 243 F-DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMC 301
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A +L+ M E N+VTF+ LI +CK+ L +AL+ + P VV
Sbjct: 302 KAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVV 361
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ C VGR+ +A E+L E ME KG P+V TY+ +I
Sbjct: 362 CYNALINGYCMVGRMDEARELLHE-------------------MEAKGLKPDVVTYSTII 402
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S+YC+ SA ++ M G+ + +TY +LIR LC R+ D + + M K G
Sbjct: 403 SAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM--IKLG 460
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y S++ G +E + AL +M K + P V S+ I G +A+
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520
Query: 362 RCFDQMIEEGGVPNVVIYDCLIH---------------AYCQEERVREASELMKEMTGHG 406
+ ++ E +P YD L+H +C + + EA ++ + M
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ S ++ ++ G CR GNV AL ++ ++ RG P S LI+ L E G
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ---RGFAPNSTSTISLIRGLFENGMVV 637
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A ++ Q++ L D +L+
Sbjct: 638 EADQVIQQLLNCCSLADAEASKALI 662
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 216/480 (45%), Gaps = 50/480 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T++ G +A ++ + +++ + P + F S++ V+ K +++ A
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ M G+Q ++ T+ L+ G C + D + M+ +KP+ V YN LI+ C
Sbjct: 313 VRQ-MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ AR L+ +ME +P+ VT+S +I AYCK + +A L ++ G +PD +
Sbjct: 372 MVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAI 431
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ +LC R+ DA + K M + G P+ TY LI
Sbjct: 432 TYSSLIRVLCEEKRLSDAHVL-------------------FKNMIKLGLQPDEFTYTSLI 472
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ G ++ AL + + M G+ + VTY LI GL R ME +
Sbjct: 473 DGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA---------MEAQQ-- 521
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL-GFCVDGNVEDAKR 362
+L+ LY E +Y M + L +L GFC+ G + +A +
Sbjct: 522 ----------LLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADK 571
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+ M++ + +Y LIH +C+ V +A K+M G+ P +++ +++ GL
Sbjct: 572 VYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLF 631
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G V A +++++ + SL + LI +G + +L M G+LP
Sbjct: 632 ENGMVVEADQVIQQLLNCC---SLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 8/263 (3%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G +P+V YN ++ + + L SA F+ M DG++ N TY+ LIR LC G +
Sbjct: 111 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
L IL+ M + G + YN+++ +R + D A + M L P V + +
Sbjct: 170 LSILRDMRGA--GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMV 227
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +EDA++ FD+M+ EG P+ V Y+ L+ YC+ EA + EMT G +
Sbjct: 228 NGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P TF +++ +C+ GN+ A+ LV + MR RG ++ LI C+KG A
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQ-MR--ERGLQMNEVTFTALIDGFCKKGFLDDA 344
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
+ + M I P + +N+L+
Sbjct: 345 LLAVRGMRQCRIKPSVVCYNALI 367
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 239/505 (47%), Gaps = 28/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R I++V++ D++ + +L +N ++ L K A
Sbjct: 242 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 301
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+ G + + T+ +L++G C + +G +LL M+ R + P++V Y +I+ LC
Sbjct: 302 LKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 361
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L+ M +PN V +S LI Y E + A LL+ G PD+
Sbjct: 362 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 421
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L G++ +A L E +G + GK+ ++ EM
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +PN Y +LI+ + + G L AL +F + G+ + T I GL GR+
Sbjct: 482 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 541
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ LK+ E ++G + Y+S++ G ++ + ++A E +M + + P +
Sbjct: 542 EALKVFS--ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C G+++ A++ FD M E+G P+ V Y +I YC+ E V EA L EM G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P + +N ++ G C++G++ A+ L E ++ +L ++ LI C+ Q
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL----SFNTLIDGYCKSCKIQ 715
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
AS L +M+ K I+PD++T+ +++
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVI 740
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 140/575 (24%), Positives = 245/575 (42%), Gaps = 98/575 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ F +I G R + ++ D + + N+ PS + ++++ L +D+ LA
Sbjct: 312 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 371
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+KM SG++ + Y+ L+ G R+ + +LL M GV P+ YN +I L
Sbjct: 372 L-EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 430
Query: 128 KNGKVGRA---------RSLMSD----------------MEE--------------PNDV 148
K GK+ A R L D M E PN+
Sbjct: 431 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 490
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+++LI + K NL+ AL + + G +PDV T + + L GRV +A+++ E
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G + G+V+ EM KG PN+ YN L+ C++G +
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A +F+ M G+ + VTY T+I G C + + + M +G + YN
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM--PSKGVQPHSFVYN 668
Query: 313 SVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++++G +E ++A+ ++M +K F + + I G+C +++A + F +MI +
Sbjct: 669 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 728
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEM----------------------------- 402
+P+ V Y +I +C+ ++ EA+ L KEM
Sbjct: 729 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788
Query: 403 ------TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
G P T+ V+ C++ N+ A KL +E +G+G L + LI
Sbjct: 789 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE---VVGKGMLTKGTIHDLLI 845
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
ALC++ AS LL +M G+ P ++L+
Sbjct: 846 TALCKREDLTEASKLLDEMGELGLKPSLAACSTLV 880
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 214/489 (43%), Gaps = 64/489 (13%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG---------------------- 98
I L R + M G+ + YTY I+ GLC R+
Sbjct: 189 ISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 248
Query: 99 ---DGF----------KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
DGF ++ VM S G+ N + YN LIH LCK GK+ +A ++ M
Sbjct: 249 ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITL 308
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+PN TF +LI YC+E N+ AL LL++ VP V+ ++ LC + A
Sbjct: 309 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 368
Query: 202 VEILEE---SGEQGRL-------------GKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++LE+ SG + + G+++ R L M G P++ YN +IS
Sbjct: 369 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 428
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ G ++ A +++ G+ + VT+ I G G++ + K M D G
Sbjct: 429 LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD--HGLM 486
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRC 363
Y ++ G ++ EAL + + L P S I G +G V++A +
Sbjct: 487 PNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKV 546
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F ++ E+G VP+V Y LI +C++ V +A EL EM G P +N ++ GLC+
Sbjct: 547 FSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606
Query: 424 QGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G++ A KL + G+ +G P S YS +I C+ A L +M KG+ P
Sbjct: 607 SGDIQRARKLFD----GMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 662
Query: 483 DYLTWNSLL 491
+N+L+
Sbjct: 663 HSFVYNALV 671
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 183/441 (41%), Gaps = 63/441 (14%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLK--------------- 47
H++ PD I GL + + + +K + + P +
Sbjct: 516 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 575
Query: 48 --------------------IFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAI 86
I+N+++D L K DI AR + M G++ D TY+
Sbjct: 576 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF-DGMPEKGLEPDSVTYST 634
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ G C + V + F L H M S+GV+P+S +YN L+H CK G + +A +L +M +
Sbjct: 635 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
++F+ LI YCK + A L ++ + +PD VT T V++ C G++
Sbjct: 695 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKM----- 749
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
E+ L KEM+ + + + TY L+ Y + G +F M
Sbjct: 750 ------EEANL--------LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 795
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ + VTY +I C + + K+ + +KG I ++ ++ L +
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI--HDLLITALCKRED 853
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
EA + L +M + L P S + F G +++A R F+ + G VP+
Sbjct: 854 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 913
Query: 382 LIHAYCQEERVREASELMKEM 402
L++ + +A L+K++
Sbjct: 914 LVNGNLNDTDSEDARNLIKQL 934
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 141/279 (50%), Gaps = 9/279 (3%)
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
C L+ M KG +PN TY I+ + C ++ A F +M+ G+ ++ LI G
Sbjct: 194 CNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 253
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
G ID+ L+I +M G + YN +++GL + + ++A E LK M L +
Sbjct: 254 FMREGDIDEVLRIKDVMVSC--GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCK 311
Query: 341 AVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
R+ +L G+C + N+ A D+M + VP+ V Y +I+ C + + A++L
Sbjct: 312 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 371
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIK 457
+++MT G P ++T++ G +G + A +L++ G+ G P Y+ +I
Sbjct: 372 LEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLD----GMSCSGVAPDIFCYNAIIS 427
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L + G + AS L+++ G+G+ PD +T+ + ++ S+
Sbjct: 428 CLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 466
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 239 YNILISSYCETGVLDSALDVF----ND--------------MKIDGISWNFVTYDTLIRG 280
++ILI SY G+LD A +VF ND M G+ N TY + G
Sbjct: 159 FDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAG 218
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FP 339
LC R+++ + M+ K G K + ++++ G RE DE L M P
Sbjct: 219 LCRAKRMNEAKLTFEEMQ--KTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIP 276
Query: 340 -RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
+ ++ I G C G +E A MI G PN + LI YC+E + A EL
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ EM +P A ++ +++GLC ++ A KL+E + G P YS LI
Sbjct: 337 LDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE---KMTFSGLKPNVVVYSTLIMG 393
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS------QQTTWLL 502
+G + A LL M G+ PD +N+++ CLS + +T+LL
Sbjct: 394 YASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 443
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 213/434 (49%), Gaps = 27/434 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D +Y+ ++ G C + +KL+ VMK +G+KPNS IY ++I LC+ K
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A S+M P+ V ++ LI +CK ++ A + S PDV+T T
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C +G +++A ++ E +G + G +K R M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PNV TY LI C+ G LDSA ++ ++M G+ N TY++++ GLC G I++ +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K++ E + G Y +++ + + D+A E LK+M + L P V ++ +
Sbjct: 512 KLVGEFEAA--GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC+ G +ED ++ + M+ +G PN ++ L+ YC ++ A+ + K+M G P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ G C+ N+ A L +E M+ G+G YS LIK ++ F A
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQE-MK--GKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 470 MLLVQMVGKGILPD 483
+ QM +G+ D
Sbjct: 687 EVFDQMRREGLAAD 700
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 30/422 (7%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV + +Y I++ +C R+ + LL +M+ +G P+ + Y+T+++ C+ G++ +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L+ M+ +PN + +I C+ L A + G +PD V T +++
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C + G ++ +F EM + P+V TY +IS +C+ G
Sbjct: 361 FC-------------------KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A +F++M G+ + VT+ LI G C G + D ++ M + G + Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM--IQAGCSPNVVTY 459
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+++ GL +E D A E L +M K L P + + G C GN+E+A + +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G + V Y L+ AYC+ + +A E++KEM G G P TFN +++G C G +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
KL+ + +G P + ++ L+K C + ++A+ + M +G+ PD T+ +
Sbjct: 580 GEKLLN---WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 490 LL 491
L+
Sbjct: 637 LV 638
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 181/391 (46%), Gaps = 65/391 (16%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
GV N YN +IH +C+ G++ A L+ ME P+ +++S ++ YC+ L
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L+E G P+ ++ LLC + ++ +A E E
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE------------------- 341
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M R+G LP+ Y LI +C+ G + +A F +M I+ + +TY +I G C G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ + K+ M + K +E P +V +
Sbjct: 402 MVEAGKLFHEM--------------------------------FCKGLE---PDSVTFTE 426
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+C G+++DA R + MI+ G PNVV Y LI C+E + A+EL+ EM G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+N++++GLC+ GN+ A+KLV E + G+ ++ Y+ L+ A C+ G
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT----YTTLMDAYCKSGEM 542
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICL 494
A +L +M+GKG+ P +T+N L+ CL
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 198/436 (45%), Gaps = 60/436 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ I+ ++I L R + + +A + R + P ++ +++D K DI A F
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M + + D TY ++ G C + + KL H M +G++P+SV + LI+ C
Sbjct: 374 FYE-MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A + + M + PN VT++ LI CKE +L +A LL + + G P++
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC G + +AV++ + E E G + TY L+
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKL-------------------VGEFEAAGLNADTVTYTTLM 533
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+YC++G +D A ++ +M G+ VT++ L+ G C G ++DG K+L M
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML----- 588
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+KG I+P + L ++ +C+ N++ A
Sbjct: 589 AKG-IAPNATTFNSLVKQ-----------------------------YCIRNNLKAATAI 618
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ M G P+ Y+ L+ +C+ ++EA L +EM G G+ ST++ ++ G +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 424 QGNVGTALKLVEEDMR 439
+ A ++ ++ R
Sbjct: 679 RKKFLEAREVFDQMRR 694
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 146/301 (48%), Gaps = 22/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +I G +A + D + + + + +P++ + +++D L KE D+D A
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G+Q + +TY ++ GLC + + + KL+ ++ G+ ++V Y TL+ + C
Sbjct: 479 LHE-MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ +A+ ++ +M +P VTF++L+ +C L + LL + G P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 184 TITKVLELLCSVGRVMDAVEILEES-----GEQGRLGK--VKGGCR---------FLKEM 227
T +++ C + A I ++ G G+ + VKG C+ +EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ KG +V TY++LI + + A +VF+ M+ +G++ + +D G R
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717
Query: 288 D 288
D
Sbjct: 718 D 718
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 239/505 (47%), Gaps = 28/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R I++V++ D++ + +L +N ++ L K A
Sbjct: 43 PDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEI 102
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+ G + + T+ +L++G C + +G +LL M+ R + P++V Y +I+ LC
Sbjct: 103 LKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCH 162
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L+ M +PN V +S LI Y E + A LL+ G PD+
Sbjct: 163 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 222
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L G++ +A L E +G + GK+ ++ EM
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +PN Y +LI+ + + G L AL +F + G+ + T I GL GR+
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ LK+ E ++G + Y+S++ G ++ + ++A E +M + + P +
Sbjct: 343 EALKVFS--ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C G+++ A++ FD M E+G P+ V Y +I YC+ E V EA L EM G
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P + +N ++ G C++G++ A+ L E ++ +L ++ LI C+ Q
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS----FNTLIDGYCKSCKIQ 516
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
AS L +M+ K I+PD++T+ +++
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVI 541
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 140/557 (25%), Positives = 245/557 (43%), Gaps = 80/557 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ F +I G R + ++ D + + N+ PS + ++++ L +D+ LA
Sbjct: 113 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 172
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+KM SG++ + Y+ L+ G R+ + +LL M GV P+ YN +I L
Sbjct: 173 L-EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLS 231
Query: 128 KNGKVGRA---------RSLMSD----------------MEE--------------PNDV 148
K GK+ A R L D M E PN+
Sbjct: 232 KAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNP 291
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+++LI + K NL+ AL + + G +PDV T + + L GRV +A+++ E
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G + G+V+ EM KG PN+ YN L+ C++G +
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A +F+ M G+ + VTY T+I G C + + + M +G + YN
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM--PSKGVQPHSFVYN 469
Query: 313 SVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++++G +E ++A+ ++M +K F + + I G+C +++A + F +MI +
Sbjct: 470 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 529
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEM-----------------TGHGYLPIASTF 414
+P+ V Y +I +C+ ++ EA+ L KEM G P T+
Sbjct: 530 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTY 589
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
V+ C++ N+ A KL +E +G+G L + LI ALC++ AS LL +
Sbjct: 590 GLVIYAHCKEDNLVEAFKLRDEV---VGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 646
Query: 475 MVGKGILPDYLTWNSLL 491
M G+ P ++L+
Sbjct: 647 MGELGLKPSLAACSTLV 663
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 207/445 (46%), Gaps = 29/445 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M +G++ D + L+ G + + ++ VM S G+ N + YN LIH LCK
Sbjct: 34 EEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKF 93
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK+ +A ++ M +PN TF +LI YC+E N+ AL LL++ VP V+
Sbjct: 94 GKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 153
Query: 186 TKVLELLCSVGRVMDAVEILEE---SGEQGRL-------------GKVKGGCRFLKEMER 229
++ LC + A ++LE+ SG + + G+++ R L M
Sbjct: 154 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC 213
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P++ YN +IS + G ++ A +++ G+ + VT+ I G G++ +
Sbjct: 214 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLK 347
K M D G Y ++ G ++ EAL + + L P S
Sbjct: 274 AAKYFDEMLD--HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G +G V++A + F ++ E+G VP+V Y LI +C++ V +A EL EM G
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQ 466
P +N ++ GLC+ G++ A KL + G+ +G P S YS +I C+
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFD----GMPEKGLEPDSVTYSTMIDGYCKSENVA 447
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A L +M KG+ P +N+L+
Sbjct: 448 EAFSLFHEMPSKGVQPHSFVYNALV 472
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 178/407 (43%), Gaps = 46/407 (11%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLK--------------- 47
H++ PD I GL + + + +K + + P +
Sbjct: 317 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 376
Query: 48 --------------------IFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAI 86
I+N+++D L K DI AR + M G++ D TY+
Sbjct: 377 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF-DGMPEKGLEPDSVTYST 435
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ G C + V + F L H M S+GV+P+S +YN L+H CK G + +A +L +M +
Sbjct: 436 MIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
++F+ LI YCK + A L ++ + +PD VT T V++ C G++ +A
Sbjct: 496 FATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ +E E+ + V ++M KG P+ TY ++I ++C+ L A + +++
Sbjct: 556 LFKEMQERNLI--VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVV 613
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ +D LI LC + + K+L M + G K ++ ++++ + +
Sbjct: 614 GKGMLTKGTIHDLLITALCKREDLTEASKLLDEM--GELGLKPSLAACSTLVRSFHEAGK 671
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
DEA + ++ L P + G D + EDA+ Q++
Sbjct: 672 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 140/317 (44%), Gaps = 26/317 (8%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VP+ T T + LC R+ +A EE M++ G P+
Sbjct: 5 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEE-------------------MQKTGLKPDY 45
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
+ + LI + G +D L + + M GI N +TY+ LI GLC G+++ +IL+
Sbjct: 46 NACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKG 105
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M G K + ++ G RE+ ALE L +MEK L P AV I G C
Sbjct: 106 M--ITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC 163
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
++ A + ++M G PNVV+Y LI Y E R+ EA L+ M+ G P +
Sbjct: 164 KDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCY 223
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++S L + G + A + E GRG P + + I + G A+ +
Sbjct: 224 NAIISCLSKAGKMEEASTYLLEIQ---GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDE 280
Query: 475 MVGKGILPDYLTWNSLL 491
M+ G++P+ + L+
Sbjct: 281 MLDHGLMPNNPLYTVLI 297
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 9/273 (3%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M KG +PN TY I+ + C ++ A F +M+ G+ ++ LI G G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
ID+ L+I +M G + YN +++GL + + ++A E LK M L + R+
Sbjct: 61 IDEVLRIKDVMVSC--GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 118
Query: 347 KIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+L G+C + N+ A D+M + VP+ V Y +I+ C + + A++L+++MT
Sbjct: 119 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 178
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKG 463
G P ++T++ G +G + A +L++ G+ G P Y+ +I L + G
Sbjct: 179 SGLKPNVVVYSTLIMGYASEGRIEEARRLLD----GMSCSGVAPDIFCYNAIISCLSKAG 234
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ AS L+++ G+G+ PD +T+ + ++ S+
Sbjct: 235 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSK 267
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 228/503 (45%), Gaps = 69/503 (13%)
Query: 61 IDLARAFYRKKMMA-----------SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
I L ++ + K+ MA SG++ + Y+ L+ L H M S
Sbjct: 319 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 378
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
GV+PN +IYN +I++LCK+G V A ++M + E P+ T++ +I +C++ +L +
Sbjct: 379 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 438
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------- 214
AL + + G P+ VT + ++ LC GRV +A +++ E G L
Sbjct: 439 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 498
Query: 215 -----GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
G + R +M+ KGC PNV TY LIS C +G+L A+ +F+ M DG+
Sbjct: 499 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 558
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDS----------------------------- 300
N VTY+ LI L RI +L LM +
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618
Query: 301 ----KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+ G + YN+++ G AL L M P + I GFC
Sbjct: 619 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 678
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+E A F++M+++G PN V Y LI YC++E++ A+ L++ M G P T+
Sbjct: 679 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTY 738
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ GL +Q N A +L + I G P Y+ +I LC+ G A + +
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKV---MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNK 795
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ +G LP+ LT++SL+ L Q+
Sbjct: 796 MIEQGCLPNLLTYSSLIRALGQE 818
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/466 (28%), Positives = 214/466 (45%), Gaps = 27/466 (5%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L I+N++++ L K+ KK+ S + D +TY ++ G C + + ++
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 442
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
+ M G +PN+V Y+TLI+ LC +G+V A L+ +M P T + I A C
Sbjct: 443 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 502
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG---- 215
+A L + G P+V T T ++ LC G + A+ + G
Sbjct: 503 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562
Query: 216 ------------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
++K L M R G N+ TYN +I YC G A+ V N+M
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G S N VTY+T+I+G C G L+IL LM D G K Y ++ G + ++
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG--GCKPDEWSYTELICGFCKISK 680
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ A +M + L P V + I G+C D ++ A + M G PNV Y+
Sbjct: 681 MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNV 740
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LIH ++ A EL K M G P T+ ++ GLC+ G+ AL++ + I
Sbjct: 741 LIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFN---KMI 797
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+G LP YS LI+AL ++G + A L ++ G++PD +T+
Sbjct: 798 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 221/509 (43%), Gaps = 64/509 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P+ I+ VI L + + D V M+P + S IL K D+D A
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 442
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL------------HV--------- 106
+ +M G + + TY+ L+ GLC + RV + F L+ H
Sbjct: 443 F-NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALC 501
Query: 107 --------------MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
MK++G +PN Y LI LC +G + A L M PN V
Sbjct: 502 DMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTV 561
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ LI + + A V+L G ++VT ++++ C +G A+ ++
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM 621
Query: 209 GEQGRLGK-------VKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G +KG C R L M GC P+ +Y LI +C+ +
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+SA +FN+M DG+ N VTY LI G C ++D +L+ M+ S G + + YN
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS--GCRPNVQTYN 739
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++GL ++N A E K M E +FP V + I G C +G+ A F++MIE+
Sbjct: 740 VLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQ 799
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PN++ Y LI A QE +V EA L E+ HG +P T+ ++ G V A
Sbjct: 800 GCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ R I G P Y LIK L
Sbjct: 860 FNFLG---RMIKAGCQPTLWTYGVLIKGL 885
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 163/398 (40%), Gaps = 44/398 (11%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + D+++Y L+ G C +++ F L + M G+ PN V Y LI CK+ K
Sbjct: 656 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 715
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A SL+ M+ PN T+++LI K+ N A L + G P+VVT T
Sbjct: 716 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 775
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKG 231
+++ LC G A+E+ + EQG L GKV+ E+ER G
Sbjct: 776 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 835
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL---------- 281
+P+ TY +I +Y +G ++ A + M G TY LI+GL
Sbjct: 836 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQR 895
Query: 282 ----------CS-GGRIDDGLKILQLMEDSKEGSKG-RISPYNSVLYGLYRENQQDEALE 329
CS G + D + + E G + N+++ L + EA E
Sbjct: 896 LAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANE 955
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L M + L P + + NV+ A F M +G ++ Y LI A C
Sbjct: 956 LLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALC 1015
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q R +EA + M + P ++ GL R G
Sbjct: 1016 QLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDG 1053
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/426 (30%), Positives = 214/426 (50%), Gaps = 32/426 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M G++ + YTY+ ++ LC + +V +G K+L M RGV P+ VIY TLI CK
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G A L S+ME P+ + FS LIC +V A L + GF PD VT
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ C +LG++K +M + G PNV TY L
Sbjct: 289 TALIDGYC-------------------KLGEMKKAFFLHNQMVQIGLTPNVVTYTALADG 329
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE-GS 304
C++G LD+A ++ ++M G+ N TY+T++ GLC G I L+ ++LME+ KE G
Sbjct: 330 LCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNI---LQAVKLMEEMKEAGL 386
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y +++ Y+ + +A E L++M L P V ++ + G C+ G +ED +R
Sbjct: 387 HPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGER 446
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
M+E+G +PN Y+ ++ YC +R ++E+ + M G +P ++T+N ++ G C
Sbjct: 447 LLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHC 506
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ N+ A L +E + R +L S Y+ LIK ++ A L +M +G++
Sbjct: 507 KARNMKEAWFLHKEMVE--KRFNLTASS-YNALIKGFFKRKKLLEARQLFEEMRREGLVA 563
Query: 483 DYLTWN 488
+N
Sbjct: 564 SAEIYN 569
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 213/439 (48%), Gaps = 29/439 (6%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV + +Y ILM L ++ + LL M+ +G P+ V Y T+I C G++ +
Sbjct: 105 GVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKV 164
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L+ +M+ +PN T+S +I CK +V +L + G PD V T +++
Sbjct: 165 VQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDG 224
Query: 192 LCSVGRV---------MDAVEILEESGEQGRL-------GKVKGGCRFLKEMERKGCLPN 235
C +G M+A EI+ +S L GKV + EM +KG P+
Sbjct: 225 FCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPD 284
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TY LI YC+ G + A + N M G++ N VTY L GLC G +D ++L
Sbjct: 285 EVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLH 344
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
M ++G + IS YN+++ GL + +A++ +++M++ L P + + + +
Sbjct: 345 EM--CRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYK 402
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + A+ +M++ G P VV ++ L++ C ++ + L+K M G +P A+T
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+N+++ C + N +++ E RG+ +G +P S Y+ LIK C+ + A L
Sbjct: 463 YNSIMKQYCIRNN----MRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLH 518
Query: 473 VQMVGKGILPDYLTWNSLL 491
+MV K ++N+L+
Sbjct: 519 KEMVEKRFNLTASSYNALI 537
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 214/450 (47%), Gaps = 24/450 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I G + VV+ + + P+L ++SI+ +L K +
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++MM GV D Y L+ G C +KL M++R + P+S+ ++ LI L
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GKV A L ++M EP++VT++ LI YCK + A L + G P+VVT
Sbjct: 263 SGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT 322
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T + + LC G + A E+L E +G + G + + ++EM+
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TY L+ +Y +TG + A ++ +M G+ VT++ L+ GLC G+++
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLE 442
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
DG ++L+ M + +G + YNS++ N + E + M + + P + ++
Sbjct: 443 DGERLLKWMLE--KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C N+++A +M+E+ Y+ LI + + +++ EA +L +EM G
Sbjct: 501 LIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ A +N + +GN+ T L+L +E
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTLELCDE 590
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 173/372 (46%), Gaps = 35/372 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +I GL + + + K + + + P + +++D K ++ +AF+
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLG-EMKKAFF 306
Query: 69 -RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G+ + TY L GLC + + +LLH M +G++ N YNT+++ LC
Sbjct: 307 LHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLC 366
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +A LM +M+E P+ +T++ L+ AY K +V A LL + G P VV
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC G++ D G R LK M KG +PN TYN ++
Sbjct: 427 TFNVLMNGLCMSGKLED-------------------GERLLKWMLEKGIMPNAATYNSIM 467
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC + + +++ M G+ + TY+ LI+G C + + + + M + +
Sbjct: 468 KQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFN 527
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD-----GNVE 358
S YN+++ G ++ + EA + ++M + + S +I VD GN+E
Sbjct: 528 LTA--SSYNALIKGFFKRKKLLEARQLFEEMRR---EGLVASAEIYNLFVDMNYEEGNME 582
Query: 359 DAKRCFDQMIEE 370
D+ IE+
Sbjct: 583 TTLELCDEAIEK 594
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 137/307 (44%), Gaps = 42/307 (13%)
Query: 222 RFLKEMERKGCLPNVDTYNILISS-----------------------------------Y 246
+ E + G N ++YNIL++S Y
Sbjct: 96 KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGY 155
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G L + + +M++ G+ N TY ++I LC G++ +G K+L+ M K G
Sbjct: 156 CHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREM--MKRGVFP 213
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
Y +++ G + A + +ME ++ P ++ S I G G V +A + F
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++MI++G P+ V Y LI YC+ +++A L +M G P T+ + GLC+
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + TA +L+ E R +G Y+ ++ LC+ G A L+ +M G+ PD
Sbjct: 334 GELDTANELLHEMCR---KGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDT 390
Query: 485 LTWNSLL 491
+T+ +L+
Sbjct: 391 ITYTTLM 397
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 228/495 (46%), Gaps = 42/495 (8%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
Q PP F ++ + + + + ++ + + F + P + +++ L + +D A
Sbjct: 65 QPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFA 124
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ K++ G Q D T+ L++GLC+ ++G+ L M G +PN V Y TLI+
Sbjct: 125 FSAL-AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 183
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK G A L+ ME +PN V FS LI + CK+ + A + + + G P
Sbjct: 184 GLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
++VT ++ LC +L + K + EM +P+V T N
Sbjct: 244 NIVTYNSLIHGLC-------------------KLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
++ + C+ G++ A DV + M G+ N VTY+ L+ G C +D +K+ M
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM--V 342
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ + YN+++ G + D+A+ ++M ++L P V + I G C G ++
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA F +M+ G +P++V Y L C+ + +A L+K + G + P + T+L
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Query: 419 SGLCRQGNVGTALKLVEEDMRGI-----GRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
G+CR G + ED R + +G P Y+ +I LC++G AS L
Sbjct: 463 DGMCRAGEL--------EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514
Query: 474 QMVGKGILPDYLTWN 488
+M G P+ T+N
Sbjct: 515 EMNKNGCSPNDCTYN 529
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 220/474 (46%), Gaps = 30/474 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + F T+IRGL I + + D + P++ + ++++ L K A
Sbjct: 138 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M Q + ++ L+ LC +V + F + M ++G+ PN V YN+LIH LCK
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +LM++M + P+ T + ++ A CKE + A +++ G P+VVT
Sbjct: 258 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C V AV++ + M K C+ NV +YN LI+
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFD-------------------TMVHKDCVANVISYNTLIN 358
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A+ +F +M ++ N VTY+TLI GLC GR+ D + + M G
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM--VARGQ 416
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y ++ L + D+A+ LK +E P + + G C G +EDA+
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + +G PNV Y+ +IH C++ + EAS+L EM +G P T+N + G
Sbjct: 477 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
R ++L+EE + RG + L+ L + G QS +L ++V
Sbjct: 537 RNNEALRTIELLEE---MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 183/391 (46%), Gaps = 30/391 (7%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M S G+ P+ +I+SLC +V A S ++ + +P+ TF+ LI C E
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ AL L +K GF P+VVT ++ LC VG A+ R
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI-------------------R 196
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+ ME+ C PNV ++ LI S C+ + A ++F++M GIS N VTY++LI GLC
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
++ M DSK + N+V+ L +E EA + + M + P
Sbjct: 257 KLCEWKHVTTLMNEMVDSK--IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 314
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V + + G C+ V+ A + FD M+ + V NV+ Y+ LI+ YC+ + V +A L +
Sbjct: 315 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 374
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM+ P T+NT++ GLC G + A+ L E + RG +P Y L LC
Sbjct: 375 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE---MVARGQIPDLVTYRTLSDYLC 431
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A LL + G PD + ++L
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 7/262 (2%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
++N S LD AL FN M + V ++ L+ + L + + M
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
+ G + V+ L N+ D A L ++ KL P A + I G CV+G
Sbjct: 97 DSF--GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ +A FD+MI EG PNVV Y LI+ C+ A L++ M P F+
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T++ LC+ V A + E I +G P Y+ LI LC+ ++ + L+ +M
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSE---MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271
Query: 476 VGKGILPDYLTWNSLLICLSQQ 497
V I+PD T N+++ L ++
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKE 293
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+N +L + + L +QM+ + P ++ I C V+ A +++
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G P+ + LI C E ++ EA L +M G G+ P T+ T+++GLC+ GN
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 429 TALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A++L +R + +G+ P +S LI +LC+ A + +M+ KGI P+ +T+
Sbjct: 193 AAIRL----LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248
Query: 488 NSLLICLSQQTTW-LLLLLLNEMV 510
NSL+ L + W + L+NEMV
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMV 272
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 228/504 (45%), Gaps = 42/504 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ F T++ GL R + + V D + + P+ + +I+D + K D A
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNL 235
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK S ++ + Y+ ++ GL R D L M+ +G+ P+ YN +I C
Sbjct: 236 LRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFC 295
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G+ A+ L+ +M E PN VT+S LI AY KE A L ++ G +P+ +
Sbjct: 296 SSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTI 355
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R +DA E M KGC P+V T+N LI
Sbjct: 356 TYNSMIDGFCKQNR-LDAAE------------------HMFYVMATKGCSPDVFTFNTLI 396
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D ++ ++M G+ + TY+TLI G C G ++ L + Q M S G
Sbjct: 397 DGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISS--G 454
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-------------LFPRAVDRSLKILG 350
I N++L GL + +ALE K M+K + P ++ I G
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+G +A+ + +M G VPN + Y +I+ C++ R+ EA+++ M + P
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPD 574
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
TFNT++SG C+ G V L+L E R RG + + Y LI + G A
Sbjct: 575 VVTFNTLVSGYCKAGRVDDGLELFCEMGR---RGIVADAITYITLIHGFRKVGNINGALD 631
Query: 471 LLVQMVGKGILPDYLTWNSLLICL 494
+ +M+ G+ PD +T S+L L
Sbjct: 632 IFQEMISSGVYPDTITIRSMLTVL 655
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 236/499 (47%), Gaps = 46/499 (9%)
Query: 18 IRGLGRA-RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMAS 75
I+GL A + +D+V++ L PS+ FN ++ V+V+ E DL + Y +KM
Sbjct: 55 IKGLEDAIDLFSDMVRSRPL-------PSVIDFNKLMGVVVRMERPDLVISLY-QKMERK 106
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
+ D Y++ IL+K C +++ + G +P+ V ++TL+H LC +V A
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
L M PN VTF+ L+ C+E +V A+ LL++ G P+ +T +++ +C +
Sbjct: 167 LDLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKI 226
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + A+ +L + E + PNV Y+ +I + G A
Sbjct: 227 GDTVSALNLLRKMEEMSHIK------------------PNVVIYSAIIDGLWKDGRHSDA 268
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+++ +M+ GI + TY+ +I G CS GR + ++LQ M + K + Y++++
Sbjct: 269 HNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPN--VVTYSALI 326
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + EA E +M + P + + I GFC ++ A+ F M +G
Sbjct: 327 NAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCS 386
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+V ++ LI YC +R+ + +EL+ EMT G + +T+NT++ G C G++ AL L
Sbjct: 387 PDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL 446
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG-----------KGILP 482
++ I G P + L+ LC+ G + A + M G+ P
Sbjct: 447 SQQ---MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEP 503
Query: 483 DYLTWNSLLICLSQQTTWL 501
D T+N L+ L + +L
Sbjct: 504 DVQTYNILISGLINEGKFL 522
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 177/376 (47%), Gaps = 34/376 (9%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKK-----MMASGVQGDDYTYAILMKGLCLTNR 96
+ P++ ++++++ VKE R F+ + M+ G+ + TY ++ G C NR
Sbjct: 315 INPNVVTYSALINAYVKE-----RKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
+ + +VM ++G P+ +NTLI C ++ L+ +M E + T++
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI +C +L AL L ++ S G PD+VT +L+ LC G++ DA+E+ +
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFK------ 483
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
K G P+V TYNILIS G A +++ +M GI N +
Sbjct: 484 --AMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTI 541
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEAL 328
TY ++I GLC R+D+ ++ M GSK SP +N+++ G + + D+ L
Sbjct: 542 TYSSMINGLCKQSRLDEATQMFDSM-----GSKS-FSPDVVTFNTLVSGYCKAGRVDDGL 595
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E +M + + A+ I GF GN+ A F +MI G P+ + ++
Sbjct: 596 ELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVL 655
Query: 387 CQEERVREASELMKEM 402
+E ++ A +++++
Sbjct: 656 WSKEELKRAVAMLEDL 671
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 141/314 (44%), Gaps = 36/314 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
PD F T+I G A+ I+D + ++ + +N+++ + D++ A
Sbjct: 387 PDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL 446
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS-----------RGVKPNS 116
++M++SGV D T L+ GLC ++ D ++ M+ GV+P+
Sbjct: 447 -SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDV 505
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK 172
YN LI L GK A L +M PN +T+S +I CK+ L A + +
Sbjct: 506 QTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDS 565
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
S F PDVVT ++ C GRV D +E+ C EM R+G
Sbjct: 566 MGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF---------------C----EMGRRGI 606
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+ + TY LI + + G ++ ALD+F +M G+ + +T +++ L S + +
Sbjct: 607 VADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVA 666
Query: 293 ILQLMEDSKEGSKG 306
+L+ ++ S + S G
Sbjct: 667 MLEDLQMSMDLSFG 680
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 120/263 (45%), Gaps = 14/263 (5%)
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L S + E L+ A+D+F+DM + + ++ L+ + R D + + Q ME +
Sbjct: 48 LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKME--R 105
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+ + +N ++ ++ AL ++ KL P V S + G CV+ V +
Sbjct: 106 KQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSE 165
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F QM PNVV + L++ C+E RV EA L+ M G P T+ T++
Sbjct: 166 ALDLFHQMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 221
Query: 420 GLCRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
G+C+ G+ +AL L+ E+M I P YS +I L + G A L +M
Sbjct: 222 GMCKIGDTVSALNLLRKMEEMSHIK----PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE 277
Query: 478 KGILPDYLTWNSLLICLSQQTTW 500
KGI PD T+N ++ W
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRW 300
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 221/440 (50%), Gaps = 64/440 (14%)
Query: 55 VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
L+K++ + K+M+ +Q + +T+ +++ LC T ++ ++ MK G P
Sbjct: 197 ALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSP 256
Query: 115 NSVIYNTLIHSLCK---NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNAL 167
N V YNTLI CK NGK+ +A +++ +M E PN TF+ILI + K++NL +L
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSL 316
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
+ ++ +P+V+T ++ LC+ G++ +A+ G R +M
Sbjct: 317 KVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAI-----------------GMR--DKM 357
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G PN+ TY+ LI+ +C+ G++ ALD+F+ +K G Y+ LI C G+I
Sbjct: 358 VSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKI 417
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DDG + + ME +EG + YN ++ GL
Sbjct: 418 DDGFALKEEME--REGIVPDVGTYNCLIAGL----------------------------- 446
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
C +GN+E AK+ FDQ+ +G +P++V + L+ YC R+A+ L+KEM+ G
Sbjct: 447 ----CRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGL 501
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+N ++ G C++GN+ A + M R + Y+ L++ +KG +
Sbjct: 502 KPRHLTYNIMMKGYCKEGNLKAATNM-RTQMEKERRLRM-NVASYNVLLQGYSQKGKLED 559
Query: 468 ASMLLVQMVGKGILPDYLTW 487
A+MLL +M+ KG++P+ +T+
Sbjct: 560 ANMLLNEMLEKGLVPNRITY 579
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 185/396 (46%), Gaps = 59/396 (14%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILIC 155
GF+ G K +++ L+ +L K + L +M +PN TF+++I
Sbjct: 172 GFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVIN 231
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
A CK + A ++E +G+ P+VV+ +++ C +G G G
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLG------------GN----G 275
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K+ LKEM PN+ T+NILI + + L +L VF +M + N +TY+
Sbjct: 276 KMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYN 335
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+LI GLC+GG+I++ + + M + G + + Y+S+
Sbjct: 336 SLINGLCNGGKINEAIGMRDKMVSA--GVQPNLITYHSL--------------------- 372
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
I GFC +G +++A FD + +G P +Y+ LI AYC+ ++ +
Sbjct: 373 ------------INGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDG 420
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L +EM G +P T+N +++GLCR GN+ A KL ++ + LP + L
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ----LTNKGLPDLVTFHIL 476
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ C +G + A+MLL +M G+ P +LT+N ++
Sbjct: 477 MEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 154/330 (46%), Gaps = 42/330 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
P+ + F +I G + + +K + ++ P++ +NS+++ L + E I +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGM 353
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
R KM+++GVQ + TY L+ G C + + + +K +G +P + +YN LI
Sbjct: 354 -----RDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLI 408
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ CK GK+ +L +ME P+ T++ LI C+ N+ A L ++ + G +
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-L 467
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD+VT ++E CS G A + LKEM + G P TY
Sbjct: 468 PDLVTFHILMEGYCSRGESRKAAML-------------------LKEMSKMGLKPRHLTY 508
Query: 240 NILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
NI++ YC+ G L +A ++ M K + N +Y+ L++G G+++D +L M
Sbjct: 509 NIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ KG + N + Y + +E D+
Sbjct: 569 E-----KGLVP--NRITYEIVKEEMVDKGF 591
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 228/495 (46%), Gaps = 42/495 (8%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
Q PP F ++ + + + + ++ + + F + P + +++ L + +D A
Sbjct: 65 QPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFA 124
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ K++ G Q D T+ L++GLC+ ++G+ L M G +PN V Y TLI+
Sbjct: 125 FSAL-AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 183
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK G A L+ ME +PN V FS LI + CK+ + A + + + G P
Sbjct: 184 GLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISP 243
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
++VT ++ LC +L + K + EM +P+V T N
Sbjct: 244 NIVTYNSLIHGLC-------------------KLCEWKHVTTLMNEMVDSKIMPDVFTLN 284
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
++ + C+ G++ A DV + M G+ N VTY+ L+ G C +D +K+ M
Sbjct: 285 TVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM--V 342
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ + YN+++ G + D+A+ ++M ++L P V + I G C G ++
Sbjct: 343 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 402
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA F +M+ G +P++V Y L C+ + +A L+K + G + P + T+L
Sbjct: 403 DAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Query: 419 SGLCRQGNVGTALKLVEEDMRGI-----GRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
G+CR G + ED R + +G P Y+ +I LC++G AS L
Sbjct: 463 DGMCRAGEL--------EDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514
Query: 474 QMVGKGILPDYLTWN 488
+M G P+ T+N
Sbjct: 515 EMNKNGCSPNDCTYN 529
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 219/474 (46%), Gaps = 30/474 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + F T+IRGL I + + D + P++ + ++++ L K A
Sbjct: 138 PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRL 197
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M Q + ++ L+ LC +V + F + M ++G+ PN V YN+LIH LCK
Sbjct: 198 LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 257
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +LM++M + P+ T + ++ A CKE + A +++ G P+VVT
Sbjct: 258 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 317
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C V AV++ + M K C+ NV +YN LI+
Sbjct: 318 YNALMDGHCLRNEVDVAVKVFD-------------------TMVHKDCVANVISYNTLIN 358
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A+ +F +M ++ N VTY+TLI GLC GR+ D + + M G
Sbjct: 359 GYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM--VARGQ 416
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y ++ L + D+A+ LK +E P + + G C G +EDA+
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + +G PNV Y+ +IH C++ + EAS+L EM +G P T+N + G
Sbjct: 477 LFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFL 536
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
R ++L+EE + RG + L+ L + G QS +L + V
Sbjct: 537 RNNEALRTIELLEE---MLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKYV 587
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 183/391 (46%), Gaps = 30/391 (7%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M S G+ P+ +I+SLC +V A S ++ + +P+ TF+ LI C E
Sbjct: 96 MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ AL L +K GF P+VVT ++ LC VG A+ R
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAI-------------------R 196
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+ ME+ C PNV ++ LI S C+ + A ++F++M GIS N VTY++LI GLC
Sbjct: 197 LLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC 256
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
++ M DSK + N+V+ L +E EA + + M + P
Sbjct: 257 KLCEWKHVTTLMNEMVDSK--IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPN 314
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V + + G C+ V+ A + FD M+ + V NV+ Y+ LI+ YC+ + V +A L +
Sbjct: 315 VVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFE 374
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM+ P T+NT++ GLC G + A+ L E + RG +P Y L LC
Sbjct: 375 EMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE---MVARGQIPDLVTYRTLSDYLC 431
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A LL + G PD + ++L
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 7/262 (2%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
++N S LD AL FN M + V ++ L+ + L + + M
Sbjct: 37 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
+ G + V+ L N+ D A L ++ KL P A + I G CV+G
Sbjct: 97 DSF--GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 154
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ +A FD+MI EG PNVV Y LI+ C+ A L++ M P F+
Sbjct: 155 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFS 214
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T++ LC+ V A + E I +G P Y+ LI LC+ ++ + L+ +M
Sbjct: 215 TLIDSLCKDRQVTEAFNIFSE---MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271
Query: 476 VGKGILPDYLTWNSLLICLSQQ 497
V I+PD T N+++ L ++
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKE 293
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+N +L + + L +QM+ + P ++ I C V+ A +++
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G P+ + LI C E ++ EA L +M G G+ P T+ T+++GLC+ GN
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 429 TALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A++L +R + +G+ P +S LI +LC+ A + +M+ KGI P+ +T+
Sbjct: 193 AAIRL----LRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248
Query: 488 NSLLICLSQQTTW-LLLLLLNEMV 510
NSL+ L + W + L+NEMV
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMV 272
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 240/508 (47%), Gaps = 29/508 (5%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
+F ++R +AR + + +A ++ + S+ NS+L LVK +DLA Y ++
Sbjct: 186 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY-QE 244
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ SGVQ + YT I++ LC ++ + L M+ +GV P+ V YNTLI++ C+ G
Sbjct: 245 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 304
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A LM M +P T++ +I CK + A +L++ G PD T
Sbjct: 305 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 364
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKV-----------KGGC-----RFLKEMERKG 231
+L C +MDA I +E QG + + K GC ++ ++M+ G
Sbjct: 365 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 424
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+ Y ILI +C GV+ AL V ++M G + VTY+T++ GLC + +
Sbjct: 425 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 484
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
++ M ++ G + +++ G ++ ++A+ + M L P V + I
Sbjct: 485 ELFTEM--TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 542
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC +E ++ MI PN + Y LI+ YC V EA L EM G+
Sbjct: 543 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 602
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T NT++ G CR GN A+K E + +G +P Y+ LI ++ A
Sbjct: 603 TIITCNTIVKGYCRAGN---AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 659
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ +M G+LPD +T+N +L S+Q
Sbjct: 660 ALVNKMENSGLLPDVITYNVILNGFSRQ 687
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 224/483 (46%), Gaps = 34/483 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I R ++ + + D +S + P + +N+I++ L K L
Sbjct: 287 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 346
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+ D TY IL+ C + + D ++ M S+GV P+ V ++ LI L K
Sbjct: 347 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 406
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + +A DM+ P++V ++ILI +C+ + AL + ++ G V DVVT
Sbjct: 407 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 466
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+L LC + +A E+ EM +G P+ T+ LI+
Sbjct: 467 YNTILNGLCKEKMLSEADEL-------------------FTEMTERGVFPDFYTFTTLIN 507
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED--SKE 302
Y + G ++ A+ +F M + + VTY+TLI G C G ++ K+ +L D S+
Sbjct: 508 GYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME---KVNELWNDMISRR 564
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GFCVDGNVEDA 360
IS Y ++ G EA +M EK F + I+ G+C GN A
Sbjct: 565 IYPNHIS-YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 623
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M+ +G VP+ + Y+ LI+ + +EE + A L+ +M G LP T+N +L+G
Sbjct: 624 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 683
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
RQG + A ++ ++ I RG P Y+ LI + + A + +M+ +G
Sbjct: 684 FSRQGRMQEAELIM---LKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740
Query: 481 LPD 483
+PD
Sbjct: 741 VPD 743
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 222/474 (46%), Gaps = 47/474 (9%)
Query: 41 NMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQ----------------GDDYT 83
N SL+ F++++ +LV+ + A+A + + SGV +
Sbjct: 127 NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLV 186
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L++ ++ +G + V+KS+G+ + N+L+ L K G V A + ++
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ N T +I+I A CK + + N L G PDVVT ++ C G
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQG--- 303
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+LEE+ E + M KG P V TYN +I+ C+TG A V
Sbjct: 304 ----LLEEAFE------------LMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 347
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M G+S + TY+ L+ C + D +I M +G + +++++ L
Sbjct: 348 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEM--PSQGVVPDLVSFSALIGLLS 405
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ D+AL+Y + M+ L P V ++ I GFC +G + +A + D+M+E+G V +VV
Sbjct: 406 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 465
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ +++ C+E+ + EA EL EMT G P TF T+++G + GN+ A+ L E
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFE-- 523
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I R P Y+ LI C+ + + L M+ + I P+++++ L+
Sbjct: 524 -MMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 576
>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
Length = 439
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 217/431 (50%), Gaps = 22/431 (5%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+ +T+++L+ GLC R+G+ + + M R PN N L+ SLC+ GK+ +A ++
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIF 61
Query: 140 SDME-EPNDVTFSILICAYCKEENLVNALVLL-EKSFSFGFVPDVVTITKVLELLCSVGR 197
++ P+ +T +ILI +C+ + L AL L E +F VP+ T T +++ C + R
Sbjct: 62 RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121
Query: 198 VMDAVEILEESGEQGR-----LGKVKGGCR----------FLKEMERKGCLPNVDTYNIL 242
+ A ++LEES +G C+ L +E+K P++ +N++
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +C+ G + A ++ + G N VTY TLI G C G + + L++ +++
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDA 360
++ + +N+++ GL + ++ + A E +KQM+ RA + L G C G +
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R F++M+ EG P+VV Y L+HA+C+ +++A ++++ M G P +T+ +L G
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
L G V TA + E+ +R P + YS L++ C+ A V+M+ + +
Sbjct: 362 LFENGKVRTATEFFEKILR---ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418
Query: 481 LPDYLTWNSLL 491
PD T L+
Sbjct: 419 APDPATCKLLV 429
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 175/385 (45%), Gaps = 64/385 (16%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN TFS+LI CK L A+ + VP++ I +L LC G++ A+ I
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-- 262
G Q C P+V T NILI+ +CE +LD AL++F++M
Sbjct: 61 FR--GIQ--------------------CSPSVITLNILINGFCELQLLDKALELFHEMEK 98
Query: 263 -------------------KIDGI-------------SWNFVTYDTLIRGLCSGGRIDDG 290
K+D + S + + ++ RG C R+D+
Sbjct: 99 NFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEA 158
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKI 348
++L M + K+ +K I +N +++G + + EA E L+ + + P AV + I
Sbjct: 159 YQLLLDMVE-KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLI 217
Query: 349 LGFCVDGNVEDAKRCFDQMI--EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
GFC GN+ +A + F + + PNVV ++ LI C+ +R+ A EL+K+M
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
T+ T++ GLC+QG ++ EE +R G P Y+ L+ A C+ G Q
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLR---EGCNPSVVTYTTLVHAHCKAGSLQ 334
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A ++ MV KGI PD T+ LL
Sbjct: 335 DAQQVIRSMVAKGIPPDVTTYTVLL 359
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
+ D + +++ G C RV + +++L + S G PN+V Y TLI CK+G + A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229
Query: 136 RSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
L + EPN VTF+ LI CK + L +A L+++ + D T T ++
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ LC +QGR +V R +EM R+GC P+V TY L+ ++C+
Sbjct: 290 DGLC----------------KQGRTSEVS---RVFEEMLREGCNPSVVTYTTLVHAHCKA 330
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G L A V M GI + TY L+ GL G++ + + + + R
Sbjct: 331 GSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI------LRERCP 384
Query: 310 P----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
P Y++++ G + DEA++Y +M +L P L + C G +
Sbjct: 385 PCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 30/295 (10%)
Query: 16 TVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR--KKM 72
+V RG +A+ +++ + D+V + + P + +N I+ K R Y + +
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAG--RVREAYEMLETL 201
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLCKNG 130
++ G + TY L+ G C + + + +L V+ SR +PN V +N LI LCK
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L+ M+ + T++ L+ CK+ + E+ G P VVT T
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C G + DA ++ ++ M KG P+V TY +L+
Sbjct: 322 TLVHAHCKAGSLQDAQQV-------------------IRSMVAKGIPPDVTTYTVLLEGL 362
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
E G + +A + F + + V Y L+RG C +D+ +K M D +
Sbjct: 363 FENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 54/283 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKEDIDLARA 66
P+ + T+I G ++ +++ ++ ++S + P++ FN+++ L K D L A
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD-RLEHA 266
Query: 67 F-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F K+M A ++ D +TY LM GLC R + ++ M G P+ V Y TL+H+
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 126 LCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
CK G + A+ ++ M + G PDV T
Sbjct: 327 HCKAGSLQDAQQVIRSM-------------------------------VAKGIPPDVTTY 355
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +LE L G+V A E F +++ R+ C P Y+ L+
Sbjct: 356 TVLLEGLFENGKVRTATE-------------------FFEKILRERCPPCAVVYSALVRG 396
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
C+ ++D A+ + +M ++ + T L+ LC GR D
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 211/425 (49%), Gaps = 30/425 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M G++ + YTY ++ LC T +V + ++L M S G+ P+ VIY TLI CK
Sbjct: 212 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 271
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G V A L +M++ P+ +T++ +IC C+ ++ A L + PD VT
Sbjct: 272 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 331
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ C G++ +A + + M + G PN+ TY L
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQ-------------------MLQMGLTPNIVTYTALADG 372
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G +D+A ++ ++M G+ N TY++L+ GLC G ID +K+++ ME + G
Sbjct: 373 LCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVA--GFH 430
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
Y +++ + + A E L+QM +L P V ++ + GFC+ G +ED ++
Sbjct: 431 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 490
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M+E+G +PN Y+ LI YC +R +E+ + M G +P +T+N ++ G C+
Sbjct: 491 LKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCK 550
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
N+ A + DM +G+G Y+ LIK ++ F A L QM +G++ D
Sbjct: 551 ARNMKEAW-FLHRDM--VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 607
Query: 484 YLTWN 488
+N
Sbjct: 608 REIYN 612
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/395 (29%), Positives = 182/395 (46%), Gaps = 61/395 (15%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICA 156
KL+ M+ +G+KPN YN +I LCK GKV A R ++S+ P+ V ++ LI
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
+CK N+ +A L ++ PD +T T V+ LC GRVM+A ++ E
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV------- 320
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
C+ L+ P+ TY LI YC+ G + A + N M G++ N VTY
Sbjct: 321 ----CKRLE--------PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTA 368
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
L GLC G +D ++L M ++G + I YNS++ GL
Sbjct: 369 LADGLCKCGEVDTANELLHEM--CRKGLELNIYTYNSLVNGL------------------ 408
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
C GN++ A + M G P+ V Y L+ AYC+ + A
Sbjct: 409 ---------------CKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
EL+++M P TFN +++G C G + KL++ + +G +P + Y+ LI
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE---KGIMPNATTYNSLI 510
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K C + ++ + + M KG++PD T+N L+
Sbjct: 511 KQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 149/282 (52%), Gaps = 17/282 (6%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ ++EM+ KG PN TYN +I C+TG + A V +M +GI+ + V Y TLI G
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--E 335
C G + ++ M+ K +ISP Y +V+ GL + + EA + +M +
Sbjct: 269 CKLGNVSSAYRLFDEMQ------KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 322
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+L P V + I G+C +G +++A +QM++ G PN+V Y L C+ V A
Sbjct: 323 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 382
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+EL+ EM G T+N++++GLC+ GN+ A+KL+ +DM G P + Y+ L
Sbjct: 383 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM-KDMEVAGFH--PDAVTYTTL 439
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
+ A C+ A LL QM+ + + P +T+N L+ C+S
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 481
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 168/396 (42%), Gaps = 59/396 (14%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P+ +N ++ +L K ++M++ G+ D Y L+ G C V +
Sbjct: 219 LKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 278
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAY 157
+L M+ R + P+ + Y +I LC+ G+V A L +M EP++VT++ LI Y
Sbjct: 279 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
CKE + A L + G P++VT T + + LC G V A E+L E +G
Sbjct: 339 CKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNI 398
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ G + + +K+ME G P+ TY L+ +YC++ + A ++
Sbjct: 399 YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M + VT++ L+ G C G ++DG K+L+ M + +G + YNS++
Sbjct: 459 MLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLE--KGIMPNATTYNSLIKQYCIR 516
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA------------------- 360
N E + M + + P ++ I G C N+++A
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 576
Query: 361 ----------------KRCFDQMIEEGGVPNVVIYD 380
+ F+QM EG V + IY+
Sbjct: 577 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYN 612
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 140/332 (42%), Gaps = 60/332 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PDE + +I G + + + + + + +TP++
Sbjct: 326 PDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNI---------------------- 363
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
TY L GLC V +LLH M +G++ N YN+L++ LCK
Sbjct: 364 -------------VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 410
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A LM DME P+ VT++ L+ AYCK +V A LL + P VVT
Sbjct: 411 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 470
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C G + D G + LK M KG +PN TYN LI
Sbjct: 471 FNVLMNGFCMSGMLED-------------------GEKLLKWMLEKGIMPNATTYNSLIK 511
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC + + +++ M G+ + TY+ LI+G C + + + + M +G
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM--VGKGF 569
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
+S YN+++ G Y+ + EA E +QM +
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQMRR 601
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 240/522 (45%), Gaps = 67/522 (12%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR--KKMMASGVQGDDYTYAILMKGLCL 93
L R + PSL+ N++L L + L +A + ++ + + YT+ +L+ C
Sbjct: 161 LRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCS 220
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ D L M+ G+ P++V YNTL+++ C+ G +G AR+L++ M+ P T
Sbjct: 221 KGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPT 280
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ L+ A+ + + A ++E ++GF PD+ T + LC G+V +A +
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRL---KD 337
Query: 210 EQGRLGKV---------------KGGC-----RFLKEMERKGCLPNVDTYNILISSYCET 249
E RLG K C R L+EM KG P + T+NI++ S C+
Sbjct: 338 EMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM------------ 297
G L+ AL + +G++ + +TY+TLI C G + ++ M
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457
Query: 298 -------------EDSKE-----GSKGRIS---PYNSVLYGLYRENQQDEALEYLKQM-- 334
ED++E +G + Y +V+ ++E + AL QM
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
KL P + I G C +++A ++ +E+G VP+ Y+ +IHAYC+E +
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLEN 577
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A +M + + P T NT+++GLC G + ALKL E + +G Y+
Sbjct: 578 AFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES---WVEKGKKVDVITYNT 634
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
LI+++C+ G +A M KG+ PD T+N +L LS+
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 187/399 (46%), Gaps = 32/399 (8%)
Query: 102 KLLHVMKSR-GVKPNSVIYNTLIHSLCKN------GKVGRARSLMSDMEEPNDVTFSILI 154
+LLH ++ R GV+P+ N ++ +L ++ + RSL+ PN TF++L+
Sbjct: 156 QLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLV 215
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
+C + L +AL L FG PD VT +L C +G L
Sbjct: 216 HTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHC----------------RKGML 259
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G+ + L M+R G P TYN L+S++ G + A V M G + TY
Sbjct: 260 GEARA---LLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTY 316
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ L GLC G++D+ ++ ME ++ YN+++ ++ +AL L++M
Sbjct: 317 NVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVT-YNTLVDACFKWRCSSDALRLLEEM 375
Query: 335 EK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ P V ++ + C +G +E+A +++ EEG P+V+ Y+ LI AYC+ V
Sbjct: 376 RDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNV 435
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A LM EM G G T NTVL LC+ A +L+ + RG +P Y
Sbjct: 436 AKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQ---RGFVPDEVSY 492
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ A ++ + A L QM+ + ++P T+N+L+
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLI 531
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 197/426 (46%), Gaps = 32/426 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + + T++ R I K + ++ + P L+ +N +L + + + + AF
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN-VLAMGLCQAGKVDEAFR 334
Query: 69 RKKMMA--SGVQGDDYTYAILMKGLCLTNRVG-DGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K M D TY L+ C R D +LL M+ +GVKP V +N ++ S
Sbjct: 335 LKDEMERLGTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK GK+ A + + E P+ +T++ LI AYCK N+ A L+++ G D
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T+ VL LC + R DA E+L + +G +P+ +Y
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQ-------------------RGFVPDEVSYGT 494
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++++Y + + AL +++ M + + TY+TLI+GLC R+ + I +L E +
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA--IDKLNEFVE 552
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVED 359
+G + YN +++ +E + A + +M E F P V + + G C+ G ++
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + F+ +E+G +V+ Y+ LI + C+ V A +M G P A T+N VLS
Sbjct: 613 ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672
Query: 420 GLCRQG 425
L G
Sbjct: 673 ALSEAG 678
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 188/416 (45%), Gaps = 61/416 (14%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMAS 75
V++ L + + + + + ++ + P + +N+++D K ++A+AF +M+
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG-NVAKAFTLMDEMVGK 448
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV------------------ 117
G++ D +T ++ LC R D +LLH RG P+ V
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 118 -----------------IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
YNTLI LC+ ++ A +++ E P++ T++I+I A
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
YCKE +L NA K F PDVVT ++ LC G++ A+++ E E+G+ K
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK--K 626
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
V +V TYN LI S C+ G +D+AL F+DM++ G+ + TY+
Sbjct: 627 V-----------------DVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
++ L GR ++ +L + DS + S+ P + ++ E + EK
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEK 729
Query: 337 LFPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
A++ ++ L G C G +++AK D+M+++G + Y L+ + ++
Sbjct: 730 AQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 39/271 (14%)
Query: 229 RKGCLPNVDTYNILIS--SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
R+G P++ N ++S S + + ++LDVF + + N T++ L+ CS G
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ D L L M+ +GL P AV +
Sbjct: 224 LADALATLSTMQG----------------FGLS-------------------PDAVTYNT 248
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ C G + +A+ +M +G P Y+ L+ A+ + +++A+++++ MT +G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ P T+N + GLC+ G V A +L +E M +G +LP Y+ L+ A +
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDE-MERLG-TALPDVVTYNTLVDACFKWRCSS 366
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A LL +M KG+ P +T N ++ L ++
Sbjct: 367 DALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/491 (27%), Positives = 229/491 (46%), Gaps = 57/491 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
P + + T++ G+ + D V A +L+ + ++ P++ I+++I+D L K+
Sbjct: 217 PTQITYGTIVDGMCKK---GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ D +TY ++ G C + R D +LL M R + P+ V YN LI+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T++ +I +CK++ L A + + G P
Sbjct: 334 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 393
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DV T T +++ C R+ D +E+L E M R+G + N TYN
Sbjct: 394 DVFTFTTLIDGYCGAKRIDDGMELLHE-------------------MPRRGLVANTVTYN 434
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI +C G L++ALD+ M G+ + VT +TL+ GLC G++ D L++ + M+ S
Sbjct: 435 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 494
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
K P+N V P + ++ I G +G +A
Sbjct: 495 KMDLDAS-HPFNGVE-----------------------PDVLTYNILICGLINEGKFLEA 530
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ +++M G VP+ + Y +I C++ R+ EA+++ M + P TFNT+++G
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 590
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C+ G V L+L E R RG + + Y LI + G A + +M+ G+
Sbjct: 591 YCKAGRVDDGLELFCEMGR---RGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 647
Query: 481 LPDYLTWNSLL 491
PD +T ++L
Sbjct: 648 YPDTITIRNML 658
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 39/455 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K+ G+ D T+ L+ GLC+ +RV + H M +PN V + TL++ LC+ G
Sbjct: 139 KITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREG 198
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG-FVPDVVTI 185
++ A +L+ M E P +T+ ++ CK+ + V+AL LL K +P+VV
Sbjct: 199 RIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIY 258
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMER 229
+ +++ LC GR DA + E E+G G+ + L+EM
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ P+V TYN LI+++ + G A +++++M GI N +TY+++I G C R+D
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 378
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+ LM + +G + + +++ G + D+ +E L +M + L V +
Sbjct: 379 AEDMFYLM--ATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 436
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG--- 404
I GFC+ G++ A QMI G P++V + L+ C ++++A E+ K M
Sbjct: 437 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496
Query: 405 --------HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+G P T+N ++ GL +G A +L EE RG +P + YS +I
Sbjct: 497 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH---RGIVPDTITYSSMI 553
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC++ A+ + V M K P+ +T+N+L+
Sbjct: 554 DGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLI 588
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 226/486 (46%), Gaps = 54/486 (11%)
Query: 33 ATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILM 88
A DL S R PS+ F ++ V+V+ E DL + Y +KM ++ D Y++ IL+
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLY-QKMERKQIRCDIYSFNILI 121
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
K C +++ + G+ P+ V + TL+H LC +V A M E
Sbjct: 122 KCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCR 181
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN VTF+ L+ C+E +V A+ LL++ G P +T +++ +C G + A+ +
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNL 241
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L + E + +PNV Y+ +I S C+ G A ++F +M+
Sbjct: 242 LRKMEEVSHI------------------IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYR 320
GI + TY+++I G CS GR D ++LQ M + K ISP YN+++ +
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK------ISPDVVTYNALINAFVK 337
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
E + EA E +M + P + + I GFC ++ A+ F M +G P+V
Sbjct: 338 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 397
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
+ LI YC +R+ + EL+ EM G + T+NT++ G C G++ AL L ++
Sbjct: 398 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ-- 455
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG-----------KGILPDYLTW 487
I G P + L+ LC+ G + A + M G+ PD LT+
Sbjct: 456 -MISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 514
Query: 488 NSLLIC 493
N +LIC
Sbjct: 515 N-ILIC 519
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 37/360 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR-A 66
PD + +I + + + D + + P+ +NS++D K+D +D A
Sbjct: 323 PDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
FY M G D +T+ L+ G C R+ DG +LLH M RG+ N+V YNTLIH
Sbjct: 383 FYL--MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 440
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL----------LEK 172
C G + A L M P+ VT + L+ C L +AL + L+
Sbjct: 441 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDA 500
Query: 173 SFSF-GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLG 215
S F G PDV+T ++ L + G+ ++A E+ EE +G +
Sbjct: 501 SHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
++ + M K PNV T+N LI+ YC+ G +D L++F +M GI + + Y
Sbjct: 561 RLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYI 620
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
TLI G G I+ L I Q M S G ++L G + + + + A+ L+ ++
Sbjct: 621 TLIYGFRKVGNINGALDIFQEMISS--GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 127/263 (48%), Gaps = 10/263 (3%)
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L S + E L+ A+D+F+DM + V + L+ + R D + + Q ME +
Sbjct: 50 LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKME--R 107
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+ + I +N ++ ++ AL ++ KL P V + + G CV+ V +
Sbjct: 108 KQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSE 167
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F QM E PNVV + L++ C+E R+ EA L+ M G P T+ T++
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227
Query: 420 GLCRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
G+C++G+ +AL L+ E++ I +P YS +I +LC+ G A L +M
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHI----IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283
Query: 478 KGILPDYLTWNSLLICLSQQTTW 500
KGI PD T+NS+++ W
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRW 306
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 240/508 (47%), Gaps = 29/508 (5%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
+F ++R +AR + + +A ++ + S+ NS+L LVK +DLA Y ++
Sbjct: 29 VFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY-QE 87
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ SGVQ + YT I++ LC ++ + L M+ +GV P+ V YNTLI++ C+ G
Sbjct: 88 VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A LM M +P T++ +I CK + A +L++ G PD T
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNI 207
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKV-----------KGGC-----RFLKEMERKG 231
+L C +MDA I +E QG + + K GC ++ ++M+ G
Sbjct: 208 LLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAG 267
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+ Y ILI +C GV+ AL V ++M G + VTY+T++ GLC + +
Sbjct: 268 LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEAD 327
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
++ M ++ G + +++ G ++ ++A+ + M L P V + I
Sbjct: 328 ELFTEM--TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC +E ++ MI PN + Y LI+ YC V EA L EM G+
Sbjct: 386 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEA 445
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T NT++ G CR GN A+K E + +G +P Y+ LI ++ A
Sbjct: 446 TIITCNTIVKGYCRAGN---AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAF 502
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ +M G+LPD +T+N +L S+Q
Sbjct: 503 ALVNKMENSGLLPDVITYNVILNGFSRQ 530
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 224/487 (45%), Gaps = 42/487 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I R ++ + + D +S + P + +N+I++ L K L
Sbjct: 130 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGV 189
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+ D TY IL+ C + + D ++ M S+GV P+ V ++ LI L K
Sbjct: 190 LDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSK 249
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + +A DM+ P++V ++ILI +C+ + AL + ++ G V DVVT
Sbjct: 250 NGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVT 309
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+L LC + +A E+ EM +G P+ T+ LI+
Sbjct: 310 YNTILNGLCKEKMLSEADEL-------------------FTEMTERGVFPDFYTFTTLIN 350
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED--SKE 302
Y + G ++ A+ +F M + + VTY+TLI G C G ++ K+ +L D S+
Sbjct: 351 GYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEME---KVNELWNDMISRR 407
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GFCVDGNVEDA 360
IS Y ++ G EA +M EK F + I+ G+C GN A
Sbjct: 408 IYPNHIS-YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKA 466
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M+ +G VP+ + Y+ LI+ + +EE + A L+ +M G LP T+N +L+G
Sbjct: 467 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 526
Query: 421 LCRQGNVGTA----LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
RQG + A LK++E RG P Y+ LI + + A + +M+
Sbjct: 527 FSRQGRMQEAELIMLKMIE-------RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579
Query: 477 GKGILPD 483
+G +PD
Sbjct: 580 QRGFVPD 586
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
N +++D L+ Y Q ++RE E + + G + N++L GL + G V A ++
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+E +R G + +I ALC+ ++ L M KG+ PD +T+N+L+
Sbjct: 86 QEVVRS---GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142
Query: 495 SQQ 497
+Q
Sbjct: 143 CRQ 145
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 243/529 (45%), Gaps = 82/529 (15%)
Query: 27 INDVVKATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDY 82
I + A DL S R PS+ F ++ V+V+ E DL + Y +KM ++ D Y
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLY-QKMERKQIRCDIY 115
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
++ IL+K C +++ + G+ P+ V +NTL+H LC +V A +L M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
E PN VTF+ L+ C+E +V A+ LL++ G P +T +++ +C +G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDT 235
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ A+++L + E + +PNV Y+ +I S C+ G A ++
Sbjct: 236 VSALDLLRKMEEISHI------------------IPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSV 314
F +M+ GI + TY+++I G CS GR D ++LQ M + K ISP YN++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK------ISPDVVTYNAL 331
Query: 315 LYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ +E + EA E +M + P + S I GFC ++ A+ F M +G
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN++ ++ LI YC +R+ + EL+ EMT G + +T+NT++ G G++ AL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 433 LVEE-------------------------------------------DMRGIGRGSLPGS 449
L++E D G P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
Y+ LI L +G F A L +M +GI+PD +T++S++ L +Q+
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 232/486 (47%), Gaps = 44/486 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
P + + T++ G+ + I D V A DL+ + ++ P++ I+++I+D L K+
Sbjct: 217 PTQITYGTIVDGMCK---IGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ D +TY ++ G C + R D +LL M R + P+ V YN LI+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T+S +I +CK+ L A + + G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+++T +++ C R+ D +E+L E M G + + TYN
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHE-------------------MTETGLVADTTTYN 434
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI + G L++ALD+ +M G+ + VT DTL+ GLC G++ D L++ ++M+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 301 KE---------GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
K+ G + + YN ++ GL E + EA E ++M + P + S I
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C +++A + FD M + PNVV + LI+ YC+ RV + EL EM G +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
A T+ T++ G + GN+ AL + +E I G P + ++ L K + A
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQE---MISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 470 MLLVQM 475
+L ++
Sbjct: 672 AMLEKL 677
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 240/505 (47%), Gaps = 50/505 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T++ GL +++ + + P++ F ++++ L +E +
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS----RGVKPNSVIYNTLIH 124
+MM G+Q TY ++ G+C ++GD L +++ + PN VIY+ +I
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMC---KIGDTVSALDLLRKMEEISHIIPNVVIYSAIID 263
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLCK+G+ A++L ++M+E P+ T++ +I +C +A LL++ P
Sbjct: 264 SLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP 323
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DVVT ++ G+ +A E+ + EM +G +PN TY+
Sbjct: 324 DVVTYNALINAFVKEGKFFEAEELYD-------------------EMLPRGIIPNTITYS 364
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+I +C+ LD+A +F M G S N +T++TLI G C RIDDG+++L M ++
Sbjct: 365 SMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET 424
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
G + YN++++G Y + AL+ L++M L P V + G C +G ++
Sbjct: 425 --GLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLK 482
Query: 359 DAKRCFDQMIEE-----------GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
DA F M + G P+V Y+ LI E + EA EL +EM G
Sbjct: 483 DALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 542
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQ 466
+P T+++++ GLC+Q + A ++ + +G S P ++ LI C+ G
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFD----SMGSKSFSPNVVTFTTLINGYCKAGRVD 598
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
L +M +GI+ + +T+ +L+
Sbjct: 599 DGLELFCEMGRRGIVANAITYITLI 623
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + ++I G + ++ L++ +P+L FN+++D + ID
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M +G+ D TY L+ G L + LL M S G+ P+ V +TL+ LC
Sbjct: 418 LHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 128 KNGKVGRARSLMSDME---------------EPNDVTFSILICAYCKEENLVNALVLLEK 172
NGK+ A + M+ EP+ T++ILI E + A L E+
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
G VPD +T + +++ LC R+ +A ++ + G K
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-------------------KSF 577
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV T+ LI+ YC+ G +D L++F +M GI N +TY TLI G G I+ L
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
I Q M S G ++L GL+ + + A+ L++++
Sbjct: 638 IFQEMISS--GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
Length = 653
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 233/508 (45%), Gaps = 41/508 (8%)
Query: 8 PPDESIFITVIRGLGRA----RMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDID 62
P E + + RA R + +A DL P +++N ++D L++E++
Sbjct: 93 PCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAP--RLYNHLIDALLRENMV 150
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A A M GVQ + +TY +L++ LC +RVG K+L M ++G P+ V Y T+
Sbjct: 151 GAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTI 210
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+ +LC G+V A ++S P +++ +I A C+E + ++ G P+V
Sbjct: 211 VSALCTLGRVDEATEVLS-AAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNV 269
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T T ++ C + G+++ C L M GC PNV T+ L
Sbjct: 270 ITYTTIVNAFC-------------------KAGELRMACAILARMVITGCTPNVATFTAL 310
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ G + ALD++ M +G + + V+Y+ LIRGLCS G + +L ME +
Sbjct: 311 VGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME--QH 368
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G Y++++ G + D A+ M + P V + + FC A
Sbjct: 369 GCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQA 428
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ D+M+ E PN V ++ LI + C RV A + EM HG P T+N +L G
Sbjct: 429 ESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHG 488
Query: 421 LCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
L R+GN G AL++V E GI + Y+ ++ LC+ + A + +M+ +G
Sbjct: 489 LFREGNCGDALQMVIEMQNHGIELSLVT----YNTVVSGLCQMRMGREAMFFVGRMIVRG 544
Query: 480 ILPDYLTWNSLLICLSQQ-----TTWLL 502
I PD T+ +++ ++ W+L
Sbjct: 545 IQPDAFTFTAIIHAYCKEGEVRMAAWIL 572
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 119/277 (42%), Gaps = 23/277 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G +A ++ + + ++R P++ ++ +++ V K+ +
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESL 431
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ + T+ L++ LC RVG + H M+ G PN YN L+H L +
Sbjct: 432 IDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFR 491
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G G A ++ +M+ E + VT++ ++ C+ A+ + + G PD T
Sbjct: 492 EGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFT 551
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T ++ C G V A IL M C N+ Y IL++
Sbjct: 552 FTAIIHAYCKEGEVRMAAWIL-------------------GAMNVVNCGRNILVYTILMA 592
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
C L+ A+ M +GI N VT++ L+RG+
Sbjct: 593 ELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 4/151 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + ++ GL R D ++ + + SL +N+++ L + + F
Sbjct: 476 PPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMF 535
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+Q D +T+ ++ C V +L M N ++Y L+ LC
Sbjct: 536 FVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELC 595
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILI 154
K+ A + M PN VT+++L+
Sbjct: 596 NQDKLEDAMVYLLKMLYEGIYPNTVTWNVLV 626
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 246/498 (49%), Gaps = 43/498 (8%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG--VQGDDYTYAILMKGLCLTNRVGD 99
+ P+ + +N +++ L K + ++A+ K M G V D TY+ ++ G C +
Sbjct: 5 VAPNERTYNVVVNGLCKARLT-SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDR 63
Query: 100 GFKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILI 154
++L M +R G+ P+ V Y +++ LC++GK+ RA ++ +M+ EP+ TFS LI
Sbjct: 64 ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALI 123
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG--EQG 212
+C + AL L ++ + D V+ + ++ LC R+ +A E+ +E E G
Sbjct: 124 TGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDG 183
Query: 213 -----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
+ G ++ + L ME + C+PNV TY+ L+ C+ G LD A
Sbjct: 184 AWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQA 243
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
LD+F M G N VTY TLI GLC+ ++D ++ M + YN++L
Sbjct: 244 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEM--TATCCPADTVSYNALL 301
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G R + +EA + K+M + P + + + GFC +E+A+ + M G+
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 361
Query: 374 -PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P+VV Y ++ Y + +R EA+E ++EM P A T+++++ GLC+ G V A++
Sbjct: 362 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAME 421
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ ++ + + P Y+ +I+ LC + A LL +MV K + P T+NS++
Sbjct: 422 V----LKNVDK---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIG 474
Query: 493 CLSQ----QTTWLLLLLL 506
L + W LL+ +
Sbjct: 475 ALCRLGDMDEAWKLLVAM 492
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 236/503 (46%), Gaps = 34/503 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +V+ GL R ++ + + + P F++++ +D A
Sbjct: 79 PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKL 138
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR---GVKPNSVIYNTLIH 124
Y K+++ S + D + + L+ GLC R+G+ ++L M+ R KP+ V Y LI
Sbjct: 139 Y-KEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALID 197
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK+G + +A ++ ME PN VT+S L+ CK +L AL L + S G VP
Sbjct: 198 GFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 257
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+VVT T ++ LC+ +V A +++E RLG+++ +
Sbjct: 258 NVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLF 317
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-GISWNFVTYDTLIRGLCS 283
KEM K CLP+ TY L+ +C L+ A + +MK GI + VTY ++ G
Sbjct: 318 KEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSR 377
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
R + + +Q M ++ + ++ Y+S++ GL + + + A+E LK ++K P V
Sbjct: 378 AKRFVEAAEFIQEM-IARNVAPNAVT-YSSLIDGLCKAGRVNHAMEVLKNVDK--PDVVT 433
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I G C E+A ++M+ + P+V ++ +I A C+ + EA +L+ M
Sbjct: 434 YTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 493
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS----LPGSGHYSPLIKAL 459
HG P T+ T+L G R G + A +L E R + S L +S LI+ L
Sbjct: 494 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGL 553
Query: 460 CEKGGFQSASMLLVQMVGKGILP 482
C+ A ++ ++ + P
Sbjct: 554 CKAREIDKAMAVVEELRSRECEP 576
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 172/372 (46%), Gaps = 25/372 (6%)
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M + PN+ T+++++ CK A VL E PD+VT + V+ C G
Sbjct: 1 MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60
Query: 198 VMDAVEILEESGEQG-----------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ A EIL E + R GK+ C ++EM+ KG P+ T++
Sbjct: 61 MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI+ +C +D AL ++ ++ + V+ LI GLC RI + ++ Q ME
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180
Query: 301 KEGS-KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNV 357
++G+ K + Y +++ G + ++A++ L ME K P V S + G C G++
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A F +M +G VPNVV Y LIH C +V A LM EMT ++N +
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM-V 476
L G CR G + A +L +E + LP Y+ L++ C + A LL M
Sbjct: 301 LDGYCRLGRIEEAKQLFKE---MAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 357
Query: 477 GKGILPDYLTWN 488
GI PD +T++
Sbjct: 358 AAGIDPDVVTYS 369
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 152/294 (51%), Gaps = 19/294 (6%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGLCSGGR 286
R+ PN TYN++++ C+ + A +V +M+ DG ++ + VTY T+I G C G
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMR-DGKSVAPDLVTYSTVINGFCKQGE 60
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+D +IL+ M +++G + Y SV+ GL R+ + D A E +++M + + P
Sbjct: 61 MDRACEILREMV-TRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S I G+C V++A + + +++ + V LI C+E R+ EA EL +EM
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179
Query: 405 H---GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI--GRGSLPGSGHYSPLIKAL 459
+ P T+ ++ G C+ GN+ A+K++ G+ GR +P YS L+ L
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKML-----GVMEGRKCVPNVVTYSSLLHGL 234
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVS 511
C+ G A L +M KG +P+ +T+ +L+ +C + + LL++EM +
Sbjct: 235 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVD-AARLLMDEMTA 287
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 28/284 (9%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
++ AR A+G+ D TY+I++ G R + + + M +R V PN+V Y+
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 404
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+LI LCK G+V A ++ ++++P+ VT++I+I C + AL LLE+ + P
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEP 464
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
V T V+ LC RLG + + L M G P + TY
Sbjct: 465 SVGTFNSVIGALC-------------------RLGDMDEAWKLLVAMAAHGLEPGMVTYT 505
Query: 241 ILISSYCETGVLDSALDVFNDM----KIDGISWNFV---TYDTLIRGLCSGGRIDDGLKI 293
L+ + TG ++ A ++F M K + N V + LIRGLC ID + +
Sbjct: 506 TLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 565
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
++ + S+E +++ GL R + +EA + + + K+
Sbjct: 566 VEELR-SRECEPAEEDCL-AIVDGLLRAGRTEEAGKLINSISKV 607
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 52/251 (20%)
Query: 9 PDESIFITVIRGLGRA-RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + V+ G RA R + ++++R N+ P+ ++S++D L K R
Sbjct: 363 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR-NVAPNAVTYSSLIDGLCKA----GRVN 417
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +++ + + D TY I+++GLC T+R + LL M ++ V+P+ +N++I +LC
Sbjct: 418 HAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALC 477
Query: 128 KNGKVGRARSLMSDME----EPNDVT---------------------------------- 149
+ G + A L+ M EP VT
Sbjct: 478 RLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSA 537
Query: 150 --------FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
FS LI CK + A+ ++E+ S P +++ L GR +A
Sbjct: 538 ANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEA 597
Query: 202 VEILEESGEQG 212
+++ + G
Sbjct: 598 GKLINSISKVG 608
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 217/443 (48%), Gaps = 28/443 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + TY L+ GLC R+ D L M G P+ V YNTL+H CK G+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + + P+ VT++ LI +CK + L A +L++ S VPDVVT
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL----GKVKGGCRFLKEME----------RKGCL 233
++ LC GRV +A ++ + G + + G CR L+ + ++G
Sbjct: 121 LVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYE 180
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P V TYNILI + ++ A ++F+ + G+ + +TY I GLC GR++D L +
Sbjct: 181 PEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLM 240
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
L+ M++ +G + +N+V+ GL +E + DEA L ME P A+ + I G
Sbjct: 241 LKDMDE--KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQ 298
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC---QEERVREASELMKEMTGHGYL 408
C G + A F +M++ G P VV Y+ L+ C QE R++EA L M G +
Sbjct: 299 CRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV 358
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T++ ++ GL + G + A +L+ M +G +P Y+ LI LC A
Sbjct: 359 PDVVTYSALIDGLGKAGKLDDARRLLGA-MEA--KGCIPNVYTYNSLISGLCGLEKVDEA 415
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L V MV KG +PD +T+ +++
Sbjct: 416 LELFVAMVEKGCVPDTITYGTII 438
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/458 (28%), Positives = 223/458 (48%), Gaps = 33/458 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + ++ GL ++D + + + +P + +N++L K ++D A
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + G D TY L+ G C +++ + ++L M S + P+ V YN+L++ LC
Sbjct: 68 F-DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLC 126
Query: 128 KNGKVGRARSLMSDME-EPNDVTFSILICAYCKE-ENLVNALVLLEKSFSFGFVPDVVTI 185
KNG+V AR L+ D PN +T+S LI C+E + AL L G+ P+V T
Sbjct: 127 KNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTY 186
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ L RV +A E+ G VK G P+ TY + I
Sbjct: 187 NILIDGLLKEDRVNEAFELFS--------GLVKHGLE-----------PDAITYTVFIDG 227
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G ++ AL + DM G + V+++ +I GLC R+D+ +L ME +K S
Sbjct: 228 LCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME-AKGCSP 286
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC---VDGNVEDA 360
IS +N+++ G R + +A+ K+M K + P V ++ + G C +G +++A
Sbjct: 287 NAIS-FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
FD MIE+G VP+VV Y LI + ++ +A L+ M G +P T+N+++SG
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 405
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
LC V AL+L + + +G +P + Y +I A
Sbjct: 406 LCGLEKVDEALELF---VAMVEKGCVPDTITYGTIISA 440
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 161/326 (49%), Gaps = 28/326 (8%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
GF P+ +T +L LC+ GR+ DA + E M + G P+V
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYER-------------------MIKAGYSPDV 45
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN L+ +C+ G LD AL +F+ G + VTY+ LI G C ++D+ +ILQ
Sbjct: 46 VTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 105
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF-PRAVDRSLKILGFCVD- 354
M E + YNS++ GL + + DEA + ++K F P + S I G C +
Sbjct: 106 M--VSENLVPDVVTYNSLVNGLCKNGRVDEARMLI--VDKGFSPNVITYSTLISGLCREL 161
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
V +A + F ++++G P V Y+ LI +E+RV EA EL + HG P A T+
Sbjct: 162 RGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 221
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+ GLC+ G V AL L+ +DM +G +P ++ +I LC++ A +LL
Sbjct: 222 TVFIDGLCKAGRVEDAL-LMLKDMDE--KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 278
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTW 500
M KG P+ +++N+L+ + W
Sbjct: 279 MEAKGCSPNAISFNTLICGQCRAGKW 304
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 232/500 (46%), Gaps = 27/500 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M ++ + E +I ++ GR + + V + + +N PS+ N+I+++LV+
Sbjct: 66 MRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFG 125
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+M GVQ D YTY I +K C T R +LL M G N+V Y
Sbjct: 126 YHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYC 185
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T++ L +G+ AR L +M P+ V F+ L+ CK+ + + LL K
Sbjct: 186 TVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKR 245
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P++ T ++ LC G + AV R +V +L++M G P+
Sbjct: 246 GVCPNLFTFNIFVQGLCREGALDRAV----------RNSRVVEAEEYLRKMVNGGFEPDD 295
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN +I YC+ G++ A V D G + TY +LI G C G D + + +
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFK- 354
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+ +G + I YN+++ GL ++ AL+ + +M + P +L I G C
Sbjct: 355 -DGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKM 413
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G V DA D I +G P++ Y+ LI YC++ ++ A+E++ M G P T+
Sbjct: 414 GCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITY 473
Query: 415 NTVLSGLCRQGN---VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
NT+L+GLC+ G V K +EE +G P Y+ ++ +LC+ A L
Sbjct: 474 NTLLNGLCKAGKSEEVMEIFKAMEE------KGCTPNIITYNIIVDSLCKAKKVNEAVDL 527
Query: 472 LVQMVGKGILPDYLTWNSLL 491
L +M KG+ PD +++ +L
Sbjct: 528 LGEMKSKGLKPDVVSFGTLF 547
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/482 (25%), Positives = 233/482 (48%), Gaps = 39/482 (8%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCL-------- 93
+ P + FN ++ VL K+ + K++ GV + +T+ I ++GLC
Sbjct: 212 LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAV 271
Query: 94 -TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
+RV + + L M + G +P+ + YN++I CK G V A ++ D +P++
Sbjct: 272 RNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEF 331
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+ LI +CK+ + A+ + + G P +V +++ L G ++ A++++ E
Sbjct: 332 TYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEM 391
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E G ++G V + + KGC P++ TYN LI YC+ L
Sbjct: 392 AENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKL 451
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
DSA ++ N M G++ + +TY+TL+ GLC G+ ++ ++I + ME+ +G I YN
Sbjct: 452 DSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEE--KGCTPNIITYN 509
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ L + + +EA++ L +M+ L P V GFC G+++ A + F +M ++
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569
Query: 371 GGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
V Y+ ++ A+ ++ + A +L M G P T+ V+ G C+ GN+
Sbjct: 570 YDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQ 629
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
K + E+M + +P + ++ LC K A ++ M+ KGI+P+ T N+
Sbjct: 630 GYKFLLENME---KRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE--TVNT 684
Query: 490 LL 491
+
Sbjct: 685 IF 686
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 17/318 (5%)
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+E GR GKV+ + M+ C P+V ++N +++ E G + A V+ M+
Sbjct: 80 IEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRD 139
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ + TY I+ C R L++L+ M + G Y +V+ GLY +
Sbjct: 140 RGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPEL--GCDSNAVAYCTVVAGLYDSGEH 197
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D A E +M L P V + + C G V +++R ++++ G PN+ ++
Sbjct: 198 DHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIF 257
Query: 383 IHAYCQE---------ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
+ C+E RV EA E +++M G+ P T+N+++ G C++G V A ++
Sbjct: 258 VQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRV 317
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+++ + +G P Y LI C+ G A + +GKG+ P + +N+L+
Sbjct: 318 LKD---AVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG 374
Query: 494 LSQQTTWL-LLLLLNEMV 510
LSQQ L L L+NEM
Sbjct: 375 LSQQGLILPALQLMNEMA 392
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 189/431 (43%), Gaps = 45/431 (10%)
Query: 99 DGFKLLHVMKSR----GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILI 154
D K L + S G K + Y ++ L +G+ L+S+M E +V ++L
Sbjct: 19 DPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRE--NVNNALLE 76
Query: 155 CAYC-------KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI--- 204
AY ++ + A+ E+ + P V + ++ +L G A ++
Sbjct: 77 GAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMR 136
Query: 205 LEESGEQGRLG----KVKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGV 251
+ + G Q + ++K C R L+ M GC N Y +++ ++G
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D A ++F++M + + V ++ L+ LC G + + ++L + K G + +
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV--LKRGVCPNLFTF 254
Query: 312 NSVLYGLYRENQQD---------EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
N + GL RE D EA EYL++M P + + I G+C G V+DA
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R + +G P+ Y LI+ +C++ A + K+ G G P +NT++ G
Sbjct: 315 NRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG 374
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
L +QG + AL+L+ E G LP Y+ +I LC+ G AS L+ + KG
Sbjct: 375 LSQQGLILPALQLMNEMAEN---GCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGC 431
Query: 481 LPDYLTWNSLL 491
PD T+N+L+
Sbjct: 432 PPDIFTYNTLI 442
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 30/268 (11%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLA 64
PPD + T+I G + ++ AT++V+R MTP + +N++L+ L K
Sbjct: 432 PPDIFTYNTLIDGYCKQLKLDS---ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEE 488
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
K M G + TY I++ LC +V + LL MKS+G+KP+ V + TL
Sbjct: 489 VMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFT 548
Query: 125 SLCKNGKVGRARSLMSDMEEPNDV-----TFSILICAYCKEENLVNALVLLEKSFSFGFV 179
CK G + A L ME+ DV T++I++ A+ ++ N+ A+ L + G
Sbjct: 549 GFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCD 608
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T V++ C ++G + G +FL E K +P++ T+
Sbjct: 609 PDNYTYRVVIDGFC-------------------KMGNITQGYKFLLENMEKRFIPSLTTF 649
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGI 267
+++ C + A+ + + M GI
Sbjct: 650 GRVLNCLCVKDKVHEAVGIIHLMLQKGI 677
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 10/204 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + ++ L +A+ +N+ V + + P + F ++ K DID A
Sbjct: 503 PNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQL 562
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ V TY I++ + KL VMK+ G P++ Y +I C
Sbjct: 563 FRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFC 622
Query: 128 KNGKVGRA-RSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + + + L+ +ME+ P+ TF ++ C ++ + A+ ++ G VP+
Sbjct: 623 KMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE-- 680
Query: 184 TITKVLELLCSVGRVMDAVEILEE 207
T+ + E + +V+ A +IL E
Sbjct: 681 TVNTIFE---ADKKVVAAPKILVE 701
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 221/440 (50%), Gaps = 64/440 (14%)
Query: 55 VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
L+KE+ + K+M+ +Q + +T+ +++ LC T ++ ++ MK G P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 115 NSVIYNTLIHSLCK---NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNAL 167
N V YNTLI CK NGK+ +A +++ +M E PN TF+ILI + K++NL ++
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
+ ++ P+V++ ++ LC+ G++ +A+ + ++ M
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK-------------------M 357
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G PN+ TYN LI+ +C+ +L ALD+F +K G Y+ LI C G+I
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DDG + + ME +EG + YN ++ GL
Sbjct: 418 DDGFALKEEME--REGIVPDVGTYNCLIAGL----------------------------- 446
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
C +GN+E AK+ FDQ+ +G +P++V + L+ YC++ R+A+ L+KEM+ G
Sbjct: 447 ----CRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+N V+ G C++GN+ A + + M R + Y+ L++ +KG +
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQ-MEKERRLRM-NVASYNVLLQGYSQKGKLED 559
Query: 468 ASMLLVQMVGKGILPDYLTW 487
A+MLL +M+ KG++P+ +T+
Sbjct: 560 ANMLLNEMLEKGLVPNRITY 579
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 55/345 (15%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+PN TF+++I A CK + A ++E +G P+VV+ +++ C +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL-------- 271
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
G G++ K LKEM PN+ T+NILI + + L ++ VF +M
Sbjct: 272 -----GGNGKMYKADA---VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ N ++Y++LI GLC+GG+I + + + M + G + + YN++
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA--GVQPNLITYNAL--------- 372
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
I GFC + +++A F + +G VP +Y+ LI
Sbjct: 373 ------------------------INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
AYC+ ++ + L +EM G +P T+N +++GLCR GN+ A KL ++ +
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ----LTS 464
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
LP + L++ C KG + A+MLL +M G+ P +LT+N
Sbjct: 465 KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 47/308 (15%)
Query: 41 NMTPSLKIFNSILDVLVKEDI--------------DLARAF-YRKKMMASGVQGDDYTYA 85
N+ S+K+F +LD VK ++ ++ A R KM+++GVQ + TY
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
L+ G C + + + + +K +G P + +YN LI + CK GK+ +L +ME
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ T++ LI C+ N+ A L ++ S G +PD+VT ++E C
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYC-------- 481
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
R G+ + LKEM + G P TYNI++ YC+ G L +A ++
Sbjct: 482 -----------RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 262 M-KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M K + N +Y+ L++G G+++D +L M + KG + N + Y + +
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE-----KGLVP--NRITYEIVK 583
Query: 321 ENQQDEAL 328
E D+
Sbjct: 584 EEMVDQGF 591
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 203/426 (47%), Gaps = 30/426 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G +AR + D + + + P ++N+I+ L +D A
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR M TY IL+ LC + R+ D +L M G PN V YNTLI+ C
Sbjct: 91 YRD--MQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A L + M E P+ T++ILI YCK+E + LL++ +G P+ +
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ L G+ +DA + + M R+ C P+ T+N++I
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQM-------------------MLRRDCKPSHFTFNLMI 249
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ G LD A ++F M G + TY+ +I G C RIDD ++L+ M ++ G
Sbjct: 250 DMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA--G 307
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ YNS++ GL + +Q DEA E + + F V S I G C ++DA+
Sbjct: 308 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 367
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +M G P+VV Y LIH +C+ +++ ++ EM G +P T++ V+ L
Sbjct: 368 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 427
Query: 422 CRQGNV 427
C+ V
Sbjct: 428 CKSARV 433
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 207/450 (46%), Gaps = 37/450 (8%)
Query: 63 LARAFYRKKMMASG-----------VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG 111
L AF RKK D TY+ L+ G C ++LL M+ RG
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALV 168
+ P++ +YNT+I LC NG+V A DM+ P+ +T++IL+ A CK + +A +
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASL 123
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------- 212
+LE G P+VVT ++ C +G + +AV + + E
Sbjct: 124 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYC 183
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ + + G + L+EM + GC PN TYN L+ S ++G A ++ M +
Sbjct: 184 KQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 243
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
T++ +I C G++D ++ QLM D G I YN ++ G R N+ D+A + L+
Sbjct: 244 TFNLMIDMFCKVGQLDLAYELFQLMTD--RGCLPDIYTYNIMISGACRANRIDDARQLLE 301
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M + P V + + G C V++A ++ + G +VV LI C+
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ +A +L++EM +G P + ++ G C+ + +L E + +G +P
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE---MLDKGCVPTVI 418
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
YS +I LC+ + MLL M+ +G+
Sbjct: 419 TYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 181/384 (47%), Gaps = 31/384 (8%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL 169
P+S+ Y+TLI+ CK +A L+ +ME+ P++ ++ +I C + +ALV
Sbjct: 31 PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
+ P V+T T +++ LC R+ DA ILE+ M
Sbjct: 91 Y-RDMQRHCAPSVITYTILVDALCKSARISDASLILED-------------------MIE 130
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
GC PNV TYN LI+ +C+ G +D A+ +FN M + S + TY+ LI G C R D
Sbjct: 131 AGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQD 190
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
G K+LQ M K G + YN+++ L + + +A + M P +L
Sbjct: 191 GAKLLQEM--VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLM 248
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I FC G ++ A F M + G +P++ Y+ +I C+ R+ +A +L++ MT G
Sbjct: 249 IDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGC 308
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+N+++SGLC+ V A ++ E G G S LI LC+
Sbjct: 309 PPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG---GYFLDVVTCSTLIDGLCKSRRLDD 365
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL +M G PD + + L+
Sbjct: 366 AEKLLREMERNGSAPDVVAYTILI 389
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 143/309 (46%), Gaps = 20/309 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G + +++ V + + + +P + +N ++D K++ A
Sbjct: 135 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 194
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ G + + TY LM L + + D F L +M R KP+ +N +I CK
Sbjct: 195 LQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 254
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L M + P+ T++I+I C+ + +A LLE+ G PDVVT
Sbjct: 255 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 314
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEME 228
++ LC +V +A E+ E G V G C+ L+EME
Sbjct: 315 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 374
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R G P+V Y ILI +C+ LD +L F++M G +TY +I LC R+
Sbjct: 375 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 434
Query: 289 DGLKILQLM 297
DG +L+ M
Sbjct: 435 DGCMLLKTM 443
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 39/271 (14%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N L+S++ A D+F + S + +TY TLI G C ++L ME
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME- 60
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
K G + YN+++ GL + D AL + + M++
Sbjct: 61 -KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR----------------------- 96
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
C P+V+ Y L+ A C+ R+ +AS ++++M G P T+NT+++
Sbjct: 97 --HC---------APSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLIN 145
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
G C+ GN+ A+ L + + P Y+ LI C++ Q + LL +MV G
Sbjct: 146 GFCKLGNMDEAVVLFNQMLEN---SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYG 202
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
P+++T+N+L+ L + ++ L +M+
Sbjct: 203 CEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 233
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 106/244 (43%), Gaps = 41/244 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + T++ L ++ D ++ R + PS FN ++D+ K +DLA
Sbjct: 205 PNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYEL 264
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN------- 120
+ + M G D YTY I++ G C NR+ D +LL M G P+ V YN
Sbjct: 265 F-QLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323
Query: 121 ----------------------------TLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
TLI LCK+ ++ A L+ +ME P+ V
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVV 383
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ILI +CK + L +L + G VP V+T + V++ LC RV D +L+
Sbjct: 384 AYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443
Query: 209 GEQG 212
E+G
Sbjct: 444 LERG 447
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMA 74
T+I GL ++R ++D K + R P + + ++ K D +D + AF+ +M+
Sbjct: 352 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFF-SEMLD 410
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV 112
G TY+I++ LC + RV DG LL M RGV
Sbjct: 411 KGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 230/501 (45%), Gaps = 42/501 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T++ GL R + + V D + + P + + +D + K D A
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK S ++ + Y+ ++ GLC R D L M+ +G+ PN V YN +I C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G+ A+ L+ +M E PN VT++ LI A+ KE A L ++ G +P+ +
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R +DA E + M KGC P+V T+ LI
Sbjct: 360 TYNSMIDGFCKQDR-LDAAEDM------------------FYLMATKGCSPDVFTFTTLI 400
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D +++ ++M G+ N VTY+TLI G C G ++ L + Q M S G
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS--G 458
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-------------LFPRAVDRSLKILG 350
I N++L GL + +ALE K M+K + P + ++ I G
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+G +A+ +++M G VP+ + Y +I C++ R+ EA+++ M + P
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
TFNT+++G C+ G V L+L E R RG + + Y LI + G A
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGR---RGIVADAIIYITLIYGFRKVGNINGALD 635
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+ +M+ G+ PD +T ++L
Sbjct: 636 IFQEMISSGVYPDTITIRNML 656
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 232/503 (46%), Gaps = 34/503 (6%)
Query: 27 INDVVKATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDY 82
I + A DL S R PS+ FN ++ +V+ E DL + Y +KM ++ D Y
Sbjct: 59 IKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY-QKMERKQIRCDIY 117
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
++ IL+K C +++ + G+ P+ V + TL+H LC + +V A L +
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI 177
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ +TF+ L+ C+E +V A+ LL++ G PD +T ++ +C +G + A+
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237
Query: 203 EILEESGEQGRLGK--------VKGGCR---------FLKEMERKGCLPNVDTYNILISS 245
+L + E + + G C+ EM+ KG PN+ TYN +I
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C +G +A + +M IS N VTY+ LI G+ + ++ M G
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM--LPRGII 355
Query: 306 GRISPYNSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
YNS++ G ++++ D A + YL + P + I G+C ++D
Sbjct: 356 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 415
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+M G V N V Y+ LIH +C + A +L ++M G P T NT+L GLC
Sbjct: 416 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 475
Query: 424 QGNVGTALKLVEE--------DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
G + AL++ + D G P Y+ LI L +G F A L +M
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535
Query: 476 VGKGILPDYLTWNSLLICLSQQT 498
+GI+PD +T++S++ L +Q+
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQS 558
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 218/488 (44%), Gaps = 76/488 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
PD+ + T + G+ + + D V A +L+ + ++ P++ I+++I+D L K+
Sbjct: 215 PDQITYGTFVDGMCK---MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ + TY ++ G C++ R +LL M R + PN V YN LI+
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T++ +I +CK++ L A + + G P
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DV T T +++ C R+ D +E+L E M R+G + N TYN
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHE-------------------MPRRGLVANTVTYN 432
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI +C G L++ALD+ M G+ + VT +TL+ GLC G++ D L++ + M+ S
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Query: 301 K----------------------------------------EGSKGRISP----YNSVLY 316
K E I P Y+S++
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL ++++ DEA + M + P V + I G+C G V+D F +M G V
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ +IY LI+ + + + A ++ +EM G P T +L+G + + A+ ++
Sbjct: 613 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 672
Query: 435 EEDMRGIG 442
E+ +G
Sbjct: 673 EDLQMSVG 680
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/519 (26%), Positives = 248/519 (47%), Gaps = 63/519 (12%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS---GVQGDDYTYAILMKGLCL 93
+ R P+L N++L+ LV+ + + F R+ + GVQ + T+ IL+ G C
Sbjct: 164 MKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCS 223
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
N + +L++ M G P++V YNT++ +LCK ++ + R L+ M+ PN T
Sbjct: 224 DNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNT 283
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++IL+ YCK + L A ++E G +PDV T ++ LC G++ +AV L +
Sbjct: 284 YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVR-LRDKM 342
Query: 210 EQGRL-------GKVKGGC----------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E +L + GC + ++EM+ +G N T+NI+I +C G +
Sbjct: 343 ESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKI 402
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--------------- 297
D A +V M G S + TY+T+I G C G++ + K++ M
Sbjct: 403 DEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTL 462
Query: 298 ----------EDS-----KEGSKGRI---SPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
+D+ K +G I Y +++ G +++ Q D AL+ ++M++ +
Sbjct: 463 LHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGI 522
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
+ + I G C+ G + A ++++E+G VP+ + +IH YC E V +A +
Sbjct: 523 VATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQ 582
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+M H P T N +L GLCR+G + L L I +G + Y+ +I
Sbjct: 583 FHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNT---WISKGKPMDTVTYNIIIS 639
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ C++ + A L+ +M GK + PD T+N+++ L++
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTK 678
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 252/526 (47%), Gaps = 46/526 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + ++ G + + + + + +L++ M P + +N+++ L E ID A
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG-FKLLHVMKSRGVKPNSVIYNTLIHSL 126
R KM + + D TY L+ G C +R D FKL+ MK+RGVK N V +N +I
Sbjct: 339 -RDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWF 396
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C GK+ A ++M M E P+ T++ +I YCK + A ++++ G D
Sbjct: 397 CTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDT 456
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T+ +L +C ++ DA + ++ ++G + L E+ TY L
Sbjct: 457 FTLNTLLHTMCLEKQLDDAYTLTMKARKRGYI---------LDEV----------TYGTL 497
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSK 301
I Y + D AL ++ +MK GI +TY+T+IRGLC G+ D + K+ +L+E
Sbjct: 498 IMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLE--- 554
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G S N +++G E ++A ++ +M L P ++ + G C +G +E
Sbjct: 555 KGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEK 614
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
F+ I +G + V Y+ +I ++C+E R+ +A +LM EM G P T+N +++
Sbjct: 615 GLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVT 674
Query: 420 GLCRQGNV----GTALKLVEEDMRGIGRGSLPGSGH----YSPLIKALCEKGGFQSASML 471
GL + G ALK E+ + + + P G YS I +LC +G ++ A L
Sbjct: 675 GLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKL 734
Query: 472 LVQMVGKGILPDYLTWNSLLICL-----SQQTTWLLLLLLNEMVSF 512
Q KG+ + T+ L+ L S TT LL +++ + F
Sbjct: 735 FQQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQF 780
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 198/410 (48%), Gaps = 35/410 (8%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR---ARSLMSDME----EPNDVTFSI 152
G ++ + MK +PN + NTL+++L ++ +R + D +PN TF+I
Sbjct: 157 GHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNI 216
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI YC + N AL L+ + +G PD VT VL LC ++
Sbjct: 217 LIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALC----------------KRS 260
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+L +V+ L +M+ G PN +TYNIL+ YC+ L A +V M G+ +
Sbjct: 261 QLTQVRD---LLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVW 317
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY+T++RGLC G+ID+ +++ ME K + YN+++ G + D A + ++
Sbjct: 318 TYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPD--VVTYNTLIDGCFEHRGSDAAFKLVE 375
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M+ + V ++ I FC +G +++A +M+E G P+ Y+ +I+ YC+
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
++ EA ++M EM G T NT+L +C + + A L M+ RG +
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLT---MKARKRGYILDEV 492
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
Y LI + A L +M GI+ +T+N+++ +CLS +T
Sbjct: 493 TYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKT 542
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+ D + AY ++ ++ +M + P T NT+L+ L R + + + E
Sbjct: 140 LLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVF 199
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
+ G P ++ LI C + A L+ QM G PD +T+N++L +C
Sbjct: 200 QDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKR 259
Query: 496 QQTTWLLLLLL 506
Q T + LLL
Sbjct: 260 SQLTQVRDLLL 270
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 144/510 (28%), Positives = 243/510 (47%), Gaps = 29/510 (5%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S P+ + F T+I+ I +++K L + P +N L+ LV+++
Sbjct: 86 SIPNATTFATLIQSFTNFHEIENLLKI--LENELGFKPDTNFYNIALNALVEDNKLKLVE 143
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
KM+ G+ D T+ +L+K LC +++ +L M + G+KP+ + + TL+
Sbjct: 144 MLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGF 203
Query: 127 CKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+ G + A + M +V+ +L+ +CKE + AL + + GF PD
Sbjct: 204 IEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQ 263
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT ++ C +G V DA++I++ E+G +LG+ + L++
Sbjct: 264 VTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQ 323
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M + C PN TYN LIS+ C+ +++A D+ + G+ + T++TLI+GLC
Sbjct: 324 MILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 383
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
D +++ + M++ +G K Y+ ++ L E + EAL LK+ME AV
Sbjct: 384 QDIAMEMFEEMKN--KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVY 441
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C +EDA+ FDQM G + V Y+ LI C+ +RV EAS+LM +M
Sbjct: 442 NTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIM 501
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T+N++L+ CR G++ A +V+ G P Y LI LC G
Sbjct: 502 EGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQ---TMASNGCEPDIFTYGTLIGGLCRAGR 558
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICL 494
AS LL + KGI+ +N ++ L
Sbjct: 559 VDVASKLLRSVQMKGIVLTPHAYNPVIQAL 588
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 214/445 (48%), Gaps = 62/445 (13%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHS---------------------------------LCKN 129
LL +KS G PN+ + TLI S L ++
Sbjct: 77 LLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFYNIALNALVED 136
Query: 130 GKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
K+ L S M V TF++LI A CK L A+++LE+ + G PD +T
Sbjct: 137 NKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITF 196
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMER 229
T +++ G + A+++ ++ G L G+V+ RF+ E+
Sbjct: 197 TTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSE 256
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+G P+ T+N L++ +C G ++ ALD+ + M G + TY++LI G+C G +
Sbjct: 257 EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEK 316
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
++ILQ M +E S ++ YN+++ L +EN+ + A + + + + L P +
Sbjct: 317 AIEILQQM-ILRECSPNTVT-YNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTL 374
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C+ N + A F++M +G P+ Y LI + C E R++EA L+KEM G
Sbjct: 375 IQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC 434
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
A +NT++ GLC+ + A ++ ++ ++ G+ R S+ Y+ LI LC+ +
Sbjct: 435 ARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV----TYNTLIDGLCKNKRVE 490
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
AS L+ QM+ +G+ PD T+NSLL
Sbjct: 491 EASQLMDQMIMEGLKPDKFTYNSLL 515
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 142/279 (50%), Gaps = 13/279 (4%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
LK+++ G +PN T+ LI S+ +++ L + + NF Y+ + L
Sbjct: 77 LLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNF--YNIALNALV 134
Query: 283 SGGRIDDGLKILQLMEDS--KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
D+ LK+++++ EG +S +N ++ L + +Q A+ L++M L
Sbjct: 135 E----DNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLK 190
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + + GF +G++ A + QM+ G + V L++ +C+E RV EA
Sbjct: 191 PDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRF 250
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ E++ G+ P TFN++++G CR GNV AL +V+ I +G P Y+ LI
Sbjct: 251 VLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVD---FMIEKGFDPDVYTYNSLISG 307
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+C+ G F+ A +L QM+ + P+ +T+N+L+ L ++
Sbjct: 308 MCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKE 346
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 157/362 (43%), Gaps = 66/362 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDL----VSRFNMTPSLKIFNSILDVL-VKEDIDL 63
P+ + T+I L + N++ ATDL VS+ + P + FN+++ L + ++ D+
Sbjct: 331 PNTVTYNTLISALCKE---NEIEAATDLARILVSK-GLLPDVCTFNTLIQGLCLSKNQDI 386
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + ++M G + D++TY+IL+ LC R+ + LL M+S G N+V+YNTLI
Sbjct: 387 AMEMF-EEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLI 445
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCK+ ++ A + ME + VT++ LI CK + + A L+++ G
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV------ 217
PD T +L C VG + A +I++ G R G+V
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKL 565
Query: 218 -----------------------------KGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
K G R +EM K P+ T+ I+ C
Sbjct: 566 LRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCN 625
Query: 249 TG-VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A+D +M GI F ++ L GLCS D ++++ ++ + + S+
Sbjct: 626 GGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERE 685
Query: 308 IS 309
S
Sbjct: 686 TS 687
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 7/128 (5%)
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ L+ Q + L+K++ G +P A+TF T++ + LK++E ++
Sbjct: 59 ETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILENEL- 117
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
G P + Y+ + AL E + ML +MV +GI+ D T+N L+ +C + Q
Sbjct: 118 ----GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQ 173
Query: 498 TTWLLLLL 505
+L+L
Sbjct: 174 LRPAILML 181
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 139/501 (27%), Positives = 230/501 (45%), Gaps = 42/501 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T++ GL R + + V D + + P + + +D + K D A
Sbjct: 180 PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNL 239
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK S ++ + Y+ ++ GLC R D L M+ +G+ PN V YN +I C
Sbjct: 240 LRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFC 299
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G+ A+ L+ +M E PN VT++ LI A+ KE A L ++ G +P+ +
Sbjct: 300 ISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 359
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R +DA E + M KGC P+V T+ LI
Sbjct: 360 TYNSMIDGFCKQDR-LDAAEDM------------------FYLMATKGCSPDVFTFTTLI 400
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D +++ ++M G+ N VTY+TLI G C G ++ L + Q M S G
Sbjct: 401 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS--G 458
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-------------LFPRAVDRSLKILG 350
I N++L GL + +ALE K M+K + P + ++ I G
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+G +A+ +++M G VP+ + Y +I C++ R+ EA+++ M + P
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 578
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
TFNT+++G C+ G V L+L E R RG + + Y LI + G A
Sbjct: 579 VVTFNTLINGYCKAGRVDDGLELFCEMGR---RGIVADAIIYITLIYGFRKVGNINGALD 635
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+ +M+ G+ PD +T ++L
Sbjct: 636 IFQEMISSGVYPDTITIRNML 656
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 230/497 (46%), Gaps = 34/497 (6%)
Query: 33 ATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILM 88
A DL S R PS+ FN ++ +V+ E DL + Y +KM ++ D Y++ IL+
Sbjct: 65 AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLY-QKMERKQIRCDIYSFTILI 123
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV 148
K C +++ + G+ P+ V + TL+H LC + +V A L + P+ +
Sbjct: 124 KCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVL 183
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
TF+ L+ C+E +V A+ LL++ G PD +T ++ +C +G + A+ +L +
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243
Query: 209 GEQGRLGK--------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGV 251
E + + G C+ EM+ KG PN+ TYN +I +C +G
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+A + +M IS N VTY+ LI G+ + ++ M G Y
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM--LPRGIIPNTITY 361
Query: 312 NSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
NS++ G ++++ D A + YL + P + I G+C ++D +M
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G V N V Y+ LIH +C + A +L ++M G P T NT+L GLC G +
Sbjct: 422 RGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 481
Query: 430 ALKLVEE--------DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
AL++ + D G P Y+ LI L +G F A L +M +GI+
Sbjct: 482 ALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIV 541
Query: 482 PDYLTWNSLLICLSQQT 498
PD +T++S++ L +Q+
Sbjct: 542 PDTITYSSMIDGLCKQS 558
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/485 (25%), Positives = 217/485 (44%), Gaps = 76/485 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
PD+ + T + G+ + + D V A +L+ + ++ P++ I+++I+D L K+
Sbjct: 215 PDQITYGTFVDGMCK---MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSD 271
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ + TY ++ G C++ R +LL M R + PN V YN LI+
Sbjct: 272 SHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALIN 331
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T++ +I +CK++ L A + + G P
Sbjct: 332 AFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP 391
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DV T T +++ C R+ D +E+L E M R+G + N TYN
Sbjct: 392 DVFTFTTLIDGYCGAKRIDDGMELLHE-------------------MPRRGLVANTVTYN 432
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI +C G L++ALD+ M G+ + VT +TL+ GLC G++ D L++ + M+ S
Sbjct: 433 TLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Query: 301 K----------------------------------------EGSKGRISP----YNSVLY 316
K E I P Y+S++
Sbjct: 493 KMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 552
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL ++++ DEA + M + P V + I G+C G V+D F +M G V
Sbjct: 553 GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVA 612
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ +IY LI+ + + + A ++ +EM G P T +L+G + + A+ ++
Sbjct: 613 DAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAML 672
Query: 435 EEDMR 439
E+ R
Sbjct: 673 EDLQR 677
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 240/522 (45%), Gaps = 67/522 (12%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR--KKMMASGVQGDDYTYAILMKGLCL 93
L R + PSL+ N++L L + L +A + ++ + + YT+ +L+ C
Sbjct: 161 LRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCS 220
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ D L M+ G+ P++V YNTL+++ C+ G +G AR+L++ M+ P T
Sbjct: 221 KGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPT 280
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ L+ A+ + + A ++E ++GF PD+ T + LC G+V +A +
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRL---KD 337
Query: 210 EQGRLGKV---------------KGGC-----RFLKEMERKGCLPNVDTYNILISSYCET 249
E RL K C R L+EM KG P + T+NI++ S C+
Sbjct: 338 EMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKE 397
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM------------ 297
G L+ AL + +G++ + +TY+TLI C G + ++ M
Sbjct: 398 GKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTL 457
Query: 298 -------------EDSKE-----GSKGRIS---PYNSVLYGLYRENQQDEALEYLKQM-- 334
ED++E +G + Y +V+ ++E + AL QM
Sbjct: 458 NTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIE 517
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
KL P + I G C +++A ++++E+G VP+ Y+ +IHAYC+E +
Sbjct: 518 RKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLEN 577
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A +M + + P T NT+++GLC G + ALKL E + +G Y+
Sbjct: 578 AFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFES---WVEKGKKVDVITYNT 634
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
LI+++C+ G +A M KG+ PD T+N +L LS+
Sbjct: 635 LIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 198/426 (46%), Gaps = 32/426 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + + T++ R I K + ++ + P L+ +N +L V + + + AF
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYN-VLAVGLCQAGKVDEAFR 334
Query: 69 RKKMMA--SGVQGDDYTYAILMKGLCLTNRVG-DGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K M S D TY L+ C R D +LL M+ +GVKP V +N ++ S
Sbjct: 335 LKDEMERLSTALPDVVTYNTLVDA-CFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK GK+ A + + E P+ +T++ LI AYCK N+ A L+++ G D
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T+ VL LC + R DA E+L + +G +P+ +Y
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQ-------------------RGFVPDEVSYGT 494
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++++Y + + AL +++ M + + TY+TLI+GLC R+ + I +L E +
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEA--IDKLNELVE 552
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVED 359
+G + YN +++ +E + A + +M E F P V + + G C+ G ++
Sbjct: 553 KGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK 612
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + F+ +E+G +V+ Y+ LI + C+ V A +M G P A T+N VLS
Sbjct: 613 ALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLS 672
Query: 420 GLCRQG 425
L G
Sbjct: 673 ALSEAG 678
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 189/416 (45%), Gaps = 61/416 (14%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMAS 75
V++ L + + + + + ++ + P + +N+++D K ++A+AF +M+
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAG-NVAKAFTLMDEMVGK 448
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV------------------ 117
G++ D +T ++ LC R D +LLH RG P+ V
Sbjct: 449 GLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPA 508
Query: 118 -----------------IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
YNTLI LC+ ++ A ++++ E P++ T++I+I A
Sbjct: 509 LRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
YCKE +L NA K F PDVVT ++ LC G++ A+++ E E+G+ K
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK--K 626
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
V +V TYN LI S C+ G +D+AL F+DM++ G+ + TY+
Sbjct: 627 V-----------------DVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
++ L GR ++ +L + DS + S+ P + ++ E + EK
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEK 729
Query: 337 LFPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
A++ ++ L G C G +++AK D+M+++G + Y L+ + ++
Sbjct: 730 AQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 101/232 (43%), Gaps = 13/232 (5%)
Query: 301 KEGSKGRISPYNSVLYGLYRENQ--QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+ G + + N+VL L R +L+ + + +L P +L + C G
Sbjct: 164 RRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGT 223
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ DA M G P+ V Y+ L++A+C++ + EA L+ M G P T+NT
Sbjct: 224 LADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNT 283
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++S R G + A K+VE G P Y+ L LC+ G A L +M
Sbjct: 284 LVSAFARLGWIKQATKVVES---MTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEME 340
Query: 477 G-KGILPDYLTWNSLL-ICLSQQTTWLLLLLLNEM----VSFVMVVHELSAK 522
LPD +T+N+L+ C + + L LL EM V +V H + K
Sbjct: 341 RLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVK 392
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 147/511 (28%), Positives = 242/511 (47%), Gaps = 53/511 (10%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M H+ + P+ + VI GL +A V +A ++ + P+L + S++ K
Sbjct: 218 MKHT--AIPNNWTYTVVINGLVKA---GKVAEAERVLQEMPV-PTLANYTSVIGGHCKAG 271
Query: 61 IDLARAFYR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+ +A++ + M G QGD+ TY L+ G C + ++LL MKS P+ Y
Sbjct: 272 -DMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTY 330
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
+ LI LC+ ++ AR L+ + PN V+++ LI + K + +A L +
Sbjct: 331 DILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMV 390
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
+ G PDVVT + ++ LC+ GR +A +L+EM K LP
Sbjct: 391 TAGQHPDVVTYSTLIRGLCNAGRASEAHS-------------------YLEEMVGKKILP 431
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
V Y+ +IS C G LD+A VF+ M +G N Y++LI GLC GR+ D L
Sbjct: 432 KVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAK--L 489
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEKLFP------RAVDRSLK 347
++ E ++ G Y +++ GL R ++ DEA + Y++ +E+ V SL+
Sbjct: 490 RVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLR 549
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
L E A+R ++ G P Y +I + C+E + EA +L+++M G G
Sbjct: 550 CL--------EQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGI 601
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P ST + ++ +CRQ A+ +EE +R GS P G YS L+ AL + G
Sbjct: 602 KPDGSTVDALVGAMCRQDKAVVAMAFLEEMVR---LGSKPSVGTYSTLLNALFKAGKPSE 658
Query: 468 ASMLLVQMVGK-GILPDYLTWNSLLICLSQQ 497
A ++L +++ PD L + L+ S Q
Sbjct: 659 AHVVLRRLISHTSCFPDELWYVGLIAAYSNQ 689
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 142/554 (25%), Positives = 244/554 (44%), Gaps = 84/554 (15%)
Query: 38 SRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
+R + ++ +N + L++ + A +++K + D TY IL++GLC +
Sbjct: 82 TRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIP-DSITYGILIRGLCNFGK 140
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-PNDVTFSILI- 154
+ L M RG++P + L+++LCK+G + A M P T++ILI
Sbjct: 141 LKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILID 200
Query: 155 -----------CAYCKEEN------------LVNALVL------LEKSFSFGFVPDVVTI 185
C Y +E ++N LV E+ VP +
Sbjct: 201 GLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANY 260
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMER 229
T V+ C G + A +LE+ +G G + G CR L+EM+
Sbjct: 261 TSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKS 320
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI-DGISWNFVTYDTLIRGLCSGGRID 288
+P++ TY+ILI+ C L A D+ ++ D + N V+Y+TLI G R++
Sbjct: 321 NDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVN 380
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
D ++ +E G + Y++++ GL + EA YL++M +K+ P+ S
Sbjct: 381 DAYQL--FLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSS 438
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G ++ A FD M+ G PN+ +Y+ LI+ C+ R+ +A +KEMT G
Sbjct: 439 VISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERG 498
Query: 407 YLPIASTFNTVLSGLCRQGNVGTA-------------------------LKLVEEDMR-- 439
P T+ T++ GLCR A L+ +E+ R
Sbjct: 499 CSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVL 558
Query: 440 --GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ G+ P + Y+ +I++LC++ A LL M+G GI PD T ++L+ + +Q
Sbjct: 559 RVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQ 618
Query: 498 TTWLL-LLLLNEMV 510
++ + L EMV
Sbjct: 619 DKAVVAMAFLEEMV 632
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 140/516 (27%), Positives = 228/516 (44%), Gaps = 38/516 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVK--ED 60
I PP S+ L R + +++ + SR F+M + ++ ++ V++ ++
Sbjct: 10 IDRPPSASLQSNRALTLEERRDVRQLLQIVESSSRLGFSMKWNGQLSQRLVGVILHMVKN 69
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ A F+ + +TY + L T + + ++L + + P+S+ Y
Sbjct: 70 GESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYG 129
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI LC GK+ A SL +M + P +T L+ A CK NL AL EK S
Sbjct: 130 ILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSS- 188
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGC 221
+P T T +++ L RV +A EE + GKV
Sbjct: 189 --IPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAE 246
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R L+EM +P + Y +I +C+ G + A + DMK G + +TY+TLI G
Sbjct: 247 RVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGH 302
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA---LEYLKQMEKLF 338
C ID ++L+ M+ + I Y+ ++ GL R + EA L L+ +
Sbjct: 303 CRLQEIDRAYELLEEMKSNDFVPD--IFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCT 360
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + I GF V DA + F +M+ G P+VV Y LI C R EA
Sbjct: 361 PNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSY 420
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++EM G LP +++V+SGLCR G + A + + + G P Y+ LI
Sbjct: 421 LEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDS---MVANGCQPNLAVYNSLIYG 477
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
LC+ G A + + +M +G PD +T+ +L++ L
Sbjct: 478 LCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGL 513
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 211/454 (46%), Gaps = 33/454 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKED-IDL 63
PD + +I GL RA+ +++ A DL+ + TP++ +N+++D K ++
Sbjct: 325 PDIFTYDILIAGLCRAKRLSE---ARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVND 381
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + + M+ +G D TY+ L++GLC R + L M + + P +Y+++I
Sbjct: 382 AYQLFLE-MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVI 440
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC+ G++ A ++ M +PN ++ LI CK L +A + +++ G
Sbjct: 441 SGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCS 500
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG------RLGKVKGGCRFLKEMER---- 229
PD VT ++ LC R +A ++ S EQG V R L++ +R
Sbjct: 501 PDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRV 560
Query: 230 ---KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
G P Y +I S C+ L A + DM GI + T D L+ +C R
Sbjct: 561 VLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMC---R 617
Query: 287 IDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAV 342
D + + +E+ + GSK + Y+++L L++ + EA L+++ FP +
Sbjct: 618 QDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDEL 677
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
I + VE+A+ ++ + G+ ++V Y+ L+ + ++ EL++EM
Sbjct: 678 WYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREM 737
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ ++ +TFN ++ G CR G A++++ E
Sbjct: 738 KRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSE 771
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 53/343 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P ++ +VI GL RA ++ D + P+L ++NS++ L K
Sbjct: 431 PKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLR 490
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF--------------------------- 101
K+M G D TY L+ GLC +R +
Sbjct: 491 VKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRC 550
Query: 102 -----KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
++L V+ + G P + Y T+I SLCK + AR L+ DM +P+ T
Sbjct: 551 LEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDA 610
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE----- 207
L+ A C+++ V A+ LE+ G P V T + +L L G+ +A +L
Sbjct: 611 LVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHT 670
Query: 208 ---SGEQGRLG---------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
E +G +V+ L+E++ K + ++ YN L+ T L
Sbjct: 671 SCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMV 730
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
++ +MK + N T++ LI+G C G+ D +++L M+
Sbjct: 731 YELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEMK 773
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 7 SPPDESIFITVIRGLGRARMINDV-VKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
S P + T++ L +A ++ V L+S + P + ++ +D ++ A
Sbjct: 636 SKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEA 695
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R ++ G+Q Y L+KGL T + ++LL MK N +N LI
Sbjct: 696 RNVLQELKSKWGIQSI-VAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQ 754
Query: 125 SLCKNGKVGRARSLMSDMEE 144
C+ G+ RA ++S+M++
Sbjct: 755 GFCRLGQTDRAVRVLSEMKK 774
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 212/445 (47%), Gaps = 45/445 (10%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M +G + TY ++ G C R + F L M +G++PN + +N +I+ LC
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++G++ ++ +M P++VT++ L+ YCKE N ALVL + G P+VV
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ +C G + A+E F +M +G PN TY +I
Sbjct: 125 TYTSLINSMCKAGNLNRAME-------------------FFDQMHVRGLCPNERTYTTII 165
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + + G+LD A V N+M G + VTY+ LI G C GR+++ + +LQ M +G
Sbjct: 166 NGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM--VGKG 223
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y++++ G R + D A + +M + + P AV S I G C + +A
Sbjct: 224 VLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEAC 283
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M+ P+ Y LI+AYC+E + +A L EM G+LP A T+N +++GL
Sbjct: 284 DMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGL 343
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI---------------KALCEKGGFQ 466
+Q A +L+ ++ S+P + Y+ LI K C KG
Sbjct: 344 NKQARSKEARRLL---LKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMD 400
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A + M+ K P+ +N ++
Sbjct: 401 EADQVFESMINKNHKPNEAIYNVII 425
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 150/280 (53%), Gaps = 7/280 (2%)
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
G RF KEMER GCLPNV TYN +I YC+ D A M + G+ N +T++ +I
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC GR+ + ++ L+E S++G YN+++ G +E +AL +M + L
Sbjct: 62 GLCRDGRLKETSEV--LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V + I C GN+ A FDQM G PN Y +I+ + Q+ + EA
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
++ EMT G++P T+N +++G C G + A+ L+ +DM +G+G LP YS +I
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLL-QDM--VGKGVLPDVVSYSTIIS 236
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A + V+M+GK +LPD +T++SL+ L +Q
Sbjct: 237 GFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQ 276
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 172/356 (48%), Gaps = 26/356 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN VT++ +I YCK + A L G P+++T ++ LC GR+ + E+
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L EM RKG +P+ TYN L++ YC+ G AL + +M
Sbjct: 76 L-------------------VEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVR 116
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
+G+S N VTY +LI +C G ++ ++ M R Y +++ G ++
Sbjct: 117 NGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERT--YTTIINGFAQQGLL 174
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
DEA L +M + P V + I G CV G +E+A M+ +G +P+VV Y +
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I + + + + A ++ EM G LP A T+++++ GLC Q + A + +E M I
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQE-MLTIK 293
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
P Y+ LI A C++G A L +M+ KG LPD +T+N L+ L++Q
Sbjct: 294 LP--PDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQA 347
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 251/538 (46%), Gaps = 60/538 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
D +F +IR +AR +N+ ++ R S+ NS+L LVK +DLA Y
Sbjct: 114 DNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVY 173
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ SG++ + YT I++ LC +++ D L M+ +G+ + V YNTLI++ C+
Sbjct: 174 -NEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCR 232
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +G A +M+ M +P T++ +I CK+ V A + + S G PD T
Sbjct: 233 EGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTT 292
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+L C ++A +I + +G R G + + ++M+
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMK 352
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +P+ Y ILI+ YC G++ AL++ + M G + + V Y+T++ GLC +
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLA 412
Query: 289 DGLKILQLMEDS-----------------KEGSKGR----------------ISPYNSVL 315
D + M + KEG+ G+ I YN ++
Sbjct: 413 DANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILI 472
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G + + ++A E +M K+FP + ++ + G+C G V +A R +D+MI +G
Sbjct: 473 DGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIK 532
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P +V + +I YC+ + +A E + +M G P + T+NT+++G + + A L
Sbjct: 533 PTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFL 592
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + +G P Y+ ++ C +G Q A ++L +M+ +GI PD T+ +L+
Sbjct: 593 IN---KMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLI 647
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 198/427 (46%), Gaps = 34/427 (7%)
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
M+S D+ + +L++ ++ +G +++ +G + N+L+ L K G V
Sbjct: 107 MSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWV 166
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + +++ E N T +I++ A CK+ + + L G D+VT +
Sbjct: 167 DLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTL 226
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ C G + +A E++ M KG P + TYN +I+ C+
Sbjct: 227 INAYCREGLLGEAFEVM-------------------NSMSGKGLKPTLFTYNAVINGLCK 267
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G A VFN+M G+S + TY+TL+ C + I M G +
Sbjct: 268 KGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM--LHRGVSPDL 325
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
++S++ R D+AL Y + M+ L P V ++ I G+C +G + +A D+
Sbjct: 326 ISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDK 385
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+E+G +VV Y+ +++ C+++ + +A+ L EM G +P TF T++ G C++GN
Sbjct: 386 MLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGN 445
Query: 427 VGTALKLVEEDMRGI--GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+G AL L GI + P Y+ LI C+ + A+ L +M+ + I P++
Sbjct: 446 MGKALSLF-----GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNH 500
Query: 485 LTWNSLL 491
+++ L+
Sbjct: 501 ISYAILV 507
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G V+ A ++++ G NV + +++A C++ ++ + + +M G T+
Sbjct: 164 GWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTY 223
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT+++ CR+G +G A +++ G+G P Y+ +I LC+KG + A + +
Sbjct: 224 NTLINAYCREGLLGEAFEVMNSMS---GKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNE 280
Query: 475 MVGKGILPDYLTWNSLLI 492
M+ G+ PD T+N+LL+
Sbjct: 281 MLSIGLSPDTTTYNTLLV 298
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 216/431 (50%), Gaps = 22/431 (5%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+ +T+++L+ GLC R+G+ + + M R PN N L+ SLC+ G + +A ++
Sbjct: 2 NRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIF 61
Query: 140 SDME-EPNDVTFSILICAYCKEENLVNALVLL-EKSFSFGFVPDVVTITKVLELLCSVGR 197
++ P+ +T +ILI +C+ + L AL L E +F VP+ T T +++ C + R
Sbjct: 62 RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDR 121
Query: 198 VMDAVEILEESGEQGR-----LGKVKGGCR----------FLKEMERKGCLPNVDTYNIL 242
+ A ++LEES +G C+ L +E+K P++ +N++
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +C+ G + A ++ + G N VTY TLI G C G + + L++ +++
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDA 360
++ + +N+++ GL + ++ + A E +KQM+ RA + L G C G +
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R F++M+ EG P+VV Y L+HA+C+ +++A ++++ M G P +T+ +L G
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
L G V TA + E+ +R P + YS L++ C+ A V+M+ + +
Sbjct: 362 LFENGKVRTATEFFEKILR---ERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRL 418
Query: 481 LPDYLTWNSLL 491
PD T L+
Sbjct: 419 APDPATCKLLV 429
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 174/385 (45%), Gaps = 64/385 (16%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN TFS+LI CK L A+ + VP++ I +L LC G + A+ I
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-- 262
G Q C P+V T NILI+ +CE +LD AL++F++M
Sbjct: 61 FR--GIQ--------------------CSPSVITLNILINGFCELQLLDKALELFHEMEK 98
Query: 263 -------------------KIDGI-------------SWNFVTYDTLIRGLCSGGRIDDG 290
K+D + S + + ++ RG C R+D+
Sbjct: 99 NFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEA 158
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKI 348
++L M + K+ +K I +N +++G + + EA E L+ + + P AV + I
Sbjct: 159 YQLLLDMVE-KKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLI 217
Query: 349 LGFCVDGNVEDAKRCFDQMI--EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
GFC GN+ +A + F + + PNVV ++ LI C+ +R+ A EL+K+M
Sbjct: 218 DGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARD 277
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
T+ T++ GLC+QG ++ EE +R G P Y+ L+ A C+ G Q
Sbjct: 278 LRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLR---EGCNPSVVTYTTLVHAHCKAGSLQ 334
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A ++ MV KGI PD T+ LL
Sbjct: 335 DAQQVIRSMVAKGIPPDVTTYTVLL 359
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 37/295 (12%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
+ D + +++ G C RV + +++L + S G PN+V Y TLI CK+G + A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229
Query: 136 RSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
L + EPN VTF+ LI CK + L +A L+++ + D T T ++
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ LC +QGR +V R +EM R+GC P+V TY L+ ++C+
Sbjct: 290 DGLC----------------KQGRTSEVS---RVFEEMLREGCNPSVVTYTTLVHAHCKA 330
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G L A V M GI + TY L+ GL G++ + + + + R
Sbjct: 331 GSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKI------LRERCP 384
Query: 310 P----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
P Y++++ G + DEA++Y +M +L P L + C G +
Sbjct: 385 PCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 30/295 (10%)
Query: 16 TVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR--KKM 72
+V RG +A+ +++ + D+V + + P + +N I+ K R Y + +
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAG--RVREAYEMLETL 201
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLCKNG 130
++ G + TY L+ G C + + + +L V+ SR +PN V +N LI LCK
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L+ M+ + T++ L+ CK+ + E+ G P VVT T
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYT 321
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C G + DA ++ ++ M KG P+V TY +L+
Sbjct: 322 TLVHAHCKAGSLQDAQQV-------------------IRSMVAKGIPPDVTTYTVLLEGL 362
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
E G + +A + F + + V Y L+RG C +D+ +K M D +
Sbjct: 363 FENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR 417
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 54/283 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKEDIDLARA 66
P+ + T+I G ++ +++ ++ ++S + P++ FN+++ L K D L A
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD-RLEHA 266
Query: 67 F-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F K+M A ++ D +TY LM GLC R + ++ M G P+ V Y TL+H+
Sbjct: 267 FELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHA 326
Query: 126 LCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
CK G + A+ ++ M + G PDV T
Sbjct: 327 HCKAGSLQDAQQVIRSM-------------------------------VAKGIPPDVTTY 355
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +LE L G+V A E F +++ R+ C P Y+ L+
Sbjct: 356 TVLLEGLFENGKVRTATE-------------------FFEKILRERCPPCAVVYSALVRG 396
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
C+ ++D A+ + +M ++ + T L+ LC GR D
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 249/540 (46%), Gaps = 61/540 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +FI+VI + + V+ + F PS+KI+N +LD L+ E+ I + YR
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G + + +TY +L+K LC N+V KLL M ++G P++V Y T+I S+C+
Sbjct: 171 D-MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
G V R L ++ EP ++ LI CKE + A L+ + G P+V++ + ++
Sbjct: 230 GLVKEGREL-AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 190 ELLCSVGRVMDAVEILEESGEQG------RLGKVKGGCRFLK-----------EMERK-G 231
+LC+ G++ A L + ++G L + GC FL+ +M R G
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC-FLRGTTFDALDLWNQMIRGFG 347
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PNV YN L+ +C G + A+ VF+ M+ G S N TY +LI G G +D +
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
I M S G + Y +++ L R ++ EA ++ M E P + I
Sbjct: 408 YIWNKMLTS--GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G ++ A++ F QM ++ PN+V Y+ L+ + R+ EA L +E+ G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE-------------------------------- 436
+ST+NT+L G C G G AL+LV +
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 437 -DMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
D+ GR P Y+ +I LC + +LL +M+ GI+P TW+ L+ C
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 198/418 (47%), Gaps = 32/418 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P S++ +I GL + + + ++P++ ++++++VL I+LA +F
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM-KSRGVKPNSVIYNTLIHSL 126
+M+ G + YT + L+KG L D L + M + G++PN V YNTL+
Sbjct: 304 L-TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C +G + +A S+ S MEE PN T+ LI + K +L A+ + K + G P+V
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKE 226
V T ++E LC + +A ++E ++ V KG C + ++
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 227 MERKG-CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
ME++ C PN+ TYN L+ + ++ A + ++ + G+ W+ TY+TL+ G C+ G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 286 RIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPR 340
L+++ ++M D K S I+ N ++ ++ + + A + L + K P
Sbjct: 543 LPGIALQLVGKMMVDGK--SPDEIT-MNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
+ + I G C ED ++MI G VP++ + LI+ + ++ VR +
Sbjct: 600 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQF 657
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 15/277 (5%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T+ ++I G +DS + MK+ G + D I + ++ + +++
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH---CSEDLFISVISVYRQVGLAERAVEMF 134
Query: 298 EDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
KE G + YN VL L EN+ + M++ P ++ + C +
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
V+ AK+ +M +G P+ V Y +I + C+ V+E EL + + P+ S +
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVY 249
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +++GLC++ + A +L+ E + +G P YS LI LC G + A L Q
Sbjct: 250 NALINGLCKEHDYKGAFELMRE---MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 475 MVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMV 510
M+ +G P+ T +SL+ C + TT+ L L N+M+
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 239/537 (44%), Gaps = 63/537 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNM---TPSLKIFNSILDVLVKEDIDLARAF 67
E + I RA + +K T +R ++ P+++++N +LD L++E++ A
Sbjct: 90 EGALVAAICAFARAGAADRALK-TFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVP 148
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M +GV+ + YTY +L+K LC +RVG ++L M +G +P+ V + T+I +LC
Sbjct: 149 VYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALC 208
Query: 128 KNGKVGRARSLMSDME----------------------------------EPNDVTFSIL 153
K ++ AR ++++M P+ V ++ +
Sbjct: 209 KLDRLDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSI 268
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
+ A+CK L A +L + + G VP+V T T +++ G+V DA+ + +G
Sbjct: 269 VGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGW 328
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+G +K M + CLP+V TY+ LI + + G LD A+
Sbjct: 329 APSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMS 388
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
++NDM G N V Y ++ LC D ++ M S E +N+++
Sbjct: 389 IWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKM--SLENCPPNTLTFNTLIRS 446
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + AL M + DR+ L G +GN EDA R +M+ G +
Sbjct: 447 LCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELS 506
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV-GTALKLV 434
+V Y+ I CQ ++EA L+ M G P A TFN ++ C++GNV A L
Sbjct: 507 LVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLG 566
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
D R + Y+ L+ LC + A + L++M+ +GI P+ TWN L+
Sbjct: 567 RMDAVNCPRNIVA----YTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLV 619
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 23/277 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I G +A ++ + + ++ P++ ++ +++DVL K+ +
Sbjct: 365 PDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENL 424
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM + T+ L++ LC R G + H M+ G PN YN L+H L +
Sbjct: 425 IDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFR 484
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G A ++++M E + V+++ I C+ + A++LL + G PD T
Sbjct: 485 EGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFT 544
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C G V A +L GR+ V C N+ Y L+S
Sbjct: 545 FNAIIHAYCKEGNVRAAAWML------GRMDAVN-------------CPRNIVAYTSLMS 585
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
C LD A+ M +GI N T++ L+RG+
Sbjct: 586 GLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 13/151 (8%)
Query: 382 LIHAYCQEERVREASELMKEMTGHGY-----LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
L+ A C R A +K + P +N +L L R+ N+ A+ V +
Sbjct: 93 LVAAICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRE-NLVAAVVPVYD 151
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+MR G P Y+ LIKALC+ +A +L +M KG PD ++ +++ L +
Sbjct: 152 NMRKAG--VEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCK 209
Query: 497 -----QTTWLLLLLLNEMVSFVMVVHELSAK 522
+ +L + S+ VVH L +
Sbjct: 210 LDRLDEARGILAEMTPVGASYNAVVHALCGQ 240
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 241/529 (45%), Gaps = 82/529 (15%)
Query: 27 INDVVKATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDY 82
I + A DL S R PS+ F ++ V+V+ E DL + Y +KM ++ D Y
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLY-QKMERKQIRCDIY 115
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
++ IL+K C +++ + G+ P+ V +NTL+H LC +V A +L M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
E PN VTF+ L+ C+E +V A+ LL++ G P +T +++ +C G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ A+ +L + E + +PNV Y+ +I S C+ G A ++
Sbjct: 236 VSALNLLRKMEEVSHI------------------IPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSV 314
F +M+ GI + TY+++I G CS GR D ++LQ M + K ISP YN++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK------ISPDVVTYNAL 331
Query: 315 LYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ +E + EA E +M + P + S I GFC ++ A+ F M +G
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN++ ++ LI YC +R+ + EL+ EMT G + +T+NT++ G G++ AL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 433 LVEE-------------------------------------------DMRGIGRGSLPGS 449
L++E D G P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
Y+ LI L +G F A L +M +GI+PD +T++S++ L +Q+
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 236/502 (47%), Gaps = 44/502 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T++ GL +++ + + P++ F ++++ L +E +
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS-RGVKPNSVIYNTLIHSLC 127
+MM G+Q TY ++ G+C LL M+ + PN VIY+ +I SLC
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G+ A++L ++M+E P+ T++ +I +C +A LL++ PDVV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ G+ +A E+ + EM +G +PN TY+ +I
Sbjct: 327 TYNALINAFVKEGKFFEAEELYD-------------------EMLPRGIIPNTITYSSMI 367
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ LD+A +F M G S N +T++TLI G C RIDDG+++L M ++ G
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--G 425
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN++++G Y + AL+ L++M L P V + G C +G ++DA
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 362 RCFDQMIEE-----------GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F M + G P+V Y+ LI E + EA EL +EM G +P
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSAS 469
T+++++ GLC+Q + A ++ + +G S P ++ LI C+ G
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFD----SMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L +M +GI+ + +T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLI 623
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 231/486 (47%), Gaps = 44/486 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
P + + T++ G+ + D V A +L+ + ++ P++ I+++I+D L K+
Sbjct: 217 PTQITYGTIVDGMCKK---GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ D +TY ++ G C + R D +LL M R + P+ V YN LI+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T+S +I +CK+ L A + + G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+++T +++ C R+ D +E+L E M G + + TYN
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHE-------------------MTETGLVADTTTYN 434
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI + G L++ALD+ +M G+ + VT DTL+ GLC G++ D L++ ++M+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 301 KE---------GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
K+ G + + YN ++ GL E + EA E ++M + P + S I
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C +++A + FD M + PNVV + LI+ YC+ RV + EL EM G +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
A T+ T++ G + GN+ AL + +E I G P + ++ L K + A
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQE---MISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 470 MLLVQM 475
+L ++
Sbjct: 672 AMLEKL 677
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + ++I G + ++ L++ +P+L FN+++D + ID
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M +G+ D TY L+ G L + LL M S G+ P+ V +TL+ LC
Sbjct: 418 LHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 128 KNGKVGRARSLMSDME---------------EPNDVTFSILICAYCKEENLVNALVLLEK 172
NGK+ A + M+ EP+ T++ILI E + A L E+
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
G VPD +T + +++ LC R+ +A ++ + G K
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-------------------KSF 577
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV T+ LI+ YC+ G +D L++F +M GI N +TY TLI G G I+ L
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
I Q M S G ++L GL+ + + A+ L++++
Sbjct: 638 IFQEMISS--GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 236/502 (47%), Gaps = 44/502 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T++ GL +++ + + P++ F ++++ L +E +
Sbjct: 147 PDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS-RGVKPNSVIYNTLIHSLC 127
+MM G+Q TY ++ G+C LL M+ + PN VIY+ +I SLC
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G+ A++L ++M+E P+ T++ +I +C +A LL++ PDVV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ G+ +A E+ + EM +G +PN TY+ +I
Sbjct: 327 TYNALINAFVKEGKFFEAEELYD-------------------EMLPRGIIPNTITYSSMI 367
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ LD+A +F M G S N +T++TLI G C RIDDG+++L M ++ G
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--G 425
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN++++G Y + AL+ L++M L P V + G C +G ++DA
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 362 RCFDQMIEE-----------GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F M + G P+V Y+ LI E + EA EL +EM G +P
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSAS 469
T+++++ GLC+Q + A ++ + +G S P ++ LI C+ G
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFD----SMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L +M +GI+ + +T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLI 623
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 231/486 (47%), Gaps = 44/486 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
P + + T++ G+ + D V A +L+ + ++ P++ I+++I+D L K+
Sbjct: 217 PTQITYGTIVDGMCKK---GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ D +TY ++ G C + R D +LL M R + P+ V YN LI+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T+S +I +CK+ L A + + G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+++T +++ C R+ D +E+L E M G + + TYN
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHE-------------------MTETGLVADTTTYN 434
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI + G L++ALD+ +M G+ + VT DTL+ GLC G++ D L++ ++M+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 301 KE---------GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
K+ G + + YN ++ GL E + EA E ++M + P + S I
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C +++A + FD M + PNVV + LI+ YC+ RV + EL EM G +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
A T+ T++ G + GN+ AL + +E I G P + ++ L K + A
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQE---MISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 470 MLLVQM 475
+L ++
Sbjct: 672 AMLEKL 677
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 144/529 (27%), Positives = 240/529 (45%), Gaps = 82/529 (15%)
Query: 27 INDVVKATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDY 82
I + A DL S R PS+ F ++ V+V+ E DL + Y +KM ++ D Y
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLY-QKMERKQIRCDIY 115
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
++ IL+K C +++ + G+ P+ V + TL+H LC +V A +L M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQM 175
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
E PN VTF+ L+ C+E +V A+ LL++ G P +T +++ +C G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ A+ +L + E + +PNV Y+ +I S C+ G A ++
Sbjct: 236 VSALNLLRKMEEVSHI------------------IPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSV 314
F +M+ GI + TY+++I G CS GR D ++LQ M + K ISP YN++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK------ISPDVVTYNAL 331
Query: 315 LYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ +E + EA E +M + P + S I GFC ++ A+ F M +G
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN++ ++ LI YC +R+ + EL+ EMT G + +T+NT++ G G++ AL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 433 LVEE-------------------------------------------DMRGIGRGSLPGS 449
L++E D G P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
Y+ LI L +G F A L +M +GI+PD +T++S++ L +Q+
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + ++I G + ++ L++ +P+L FN+++D + ID
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M +G+ D TY L+ G L + LL M S G+ P+ V +TL+ LC
Sbjct: 418 LHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 128 KNGKVGRARSLMSDME---------------EPNDVTFSILICAYCKEENLVNALVLLEK 172
NGK+ A + M+ EP+ T++ILI E + A L E+
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
G VPD +T + +++ LC R+ +A ++ + G K
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-------------------KSF 577
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV T+ LI+ YC+ G +D L++F +M GI N +TY TLI G G I+ L
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
I Q M S G ++L GL+ + + A+ L++++
Sbjct: 638 IFQEMISS--GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 236/496 (47%), Gaps = 37/496 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P E+ ++ GL + I + V +F + PSL ++N++++ + K+ +D A +
Sbjct: 318 PSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESL 377
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G+ +D TY+IL+ C ++ L M G+K Y++LI C
Sbjct: 378 F-NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHC 436
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A+SL +M +PN V ++ LI YCKE L NA L + G P+
Sbjct: 437 KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTY 496
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ LC R+ +A ++ EM +PN TYN+LI
Sbjct: 497 TFTALISGLCHANRMAEANKLF-------------------GEMVEWNVIPNEVTYNVLI 537
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK-- 301
+C+ G A ++ ++M G+ + TY LI GLCS GR+ + + + ++ +
Sbjct: 538 EGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQK 597
Query: 302 ----EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
EG + Y +++ GL + D+A ++M P + + +G
Sbjct: 598 LNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEG 657
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+E A + D ++E G + N V Y+ LI +C+ R++EA+E++ M G P +++
Sbjct: 658 NIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYS 716
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T++ CR+G++ A+KL E + RG P + Y+ LI C G A L M
Sbjct: 717 TIIYEYCRRGDLKEAIKLWES---MLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 773
Query: 476 VGKGILPDYLTWNSLL 491
+ +G+ P+ T+NSL+
Sbjct: 774 MRRGVKPNRATYNSLI 789
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 184/367 (50%), Gaps = 22/367 (5%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+A+G++ + Y L+ G C + + F+L H M +G+ PN+ + LI LC
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L +M E PN+VT+++LI +CKE N V A LL++ G VPD T
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569
Query: 187 KVLELLCSVGRVMDAVEILEE-SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ LCS GRV +A E + + GEQ +L +++G CLPNV TY LI+
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG------------CLPNVVTYTALING 617
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G++D A + +M N TY + L S G I+ K +QL + EG
Sbjct: 618 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE---KAIQLHDVLLEGFL 674
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
YN ++ G + + EA E L M + P + S I +C G++++A +
Sbjct: 675 ANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKL 734
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
++ M+ G P+ V Y+ LI+ C + +A EL +M G P +T+N+++ G C
Sbjct: 735 WESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCL 794
Query: 424 QGNVGTA 430
+V +
Sbjct: 795 MSSVSST 801
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 207/453 (45%), Gaps = 63/453 (13%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P ++ + +L+ L++ +A + ++++SG++ D Y Y +++ LC +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLF-DEIVSSGLRPDVYVYTAVVRSLCELKDFIRARE 236
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA---RSLMSDMEEPNDV-TFSILICAYC 158
++ M+S G + YN I LCKN +V A ++L+S DV T+ L+ C
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K E ++ + FGFVP ++ +++ L G + A +++ KVK
Sbjct: 297 KVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLV---------NKVK 347
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ G P++ YN LI+S C+ G LD A +FN+M G+ N VTY LI
Sbjct: 348 ----------KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
C G++D L L M ++ G K + PY+S+
Sbjct: 398 DSFCKRGKLDVALHFLGKM--TEVGIKATVYPYSSL------------------------ 431
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
I G C G + AK FD+MI G PNVVIY LI YC+E + A L
Sbjct: 432 ---------ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
EMTG G P TF ++SGLC + A KL E + +P Y+ LI+
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE---MVEWNVIPNEVTYNVLIEG 539
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C++G A LL +MV KG++PD T+ L+
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/494 (26%), Positives = 221/494 (44%), Gaps = 36/494 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMAS 75
V+ GL R R + D + + P + ++ +++ L + +D AR +M +S
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI-GRMESS 244
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G TY + ++GLC RV + ++ +++ +G++ + Y TL+ LCK +
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG 304
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+M++M E P++ S L+ K+ N+ +A L+ K FG P + ++
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+C G++ +A + G KG PN TY+ILI S+C+ G
Sbjct: 365 MCKDGKLDEAESLFNNMGH-------------------KGLFPNDVTYSILIDSFCKRGK 405
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD AL M GI Y +LI G C G++ + M G K + Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM--IANGLKPNVVIY 463
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
S++ G +E + A +M + + P + I G C + +A + F +M+E
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+PN V Y+ LI +C+E A EL+ EM G +P T+ ++SGLC G V
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 430 ALKLVEEDMRGIGR------GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
A + + D++G + G LP Y+ LI LC+ G A +L +M+ LP+
Sbjct: 584 AREFM-NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642
Query: 484 YLTWNSLLICLSQQ 497
T+ L L+ +
Sbjct: 643 QNTYACFLDYLTSE 656
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 146/539 (27%), Positives = 236/539 (43%), Gaps = 76/539 (14%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
+ + IRGL + + + + V+ +L+S + + + +++ L K + A +
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G + + L+ GL +G F L++ +K GV P+ +YN LI+S+CK+GK
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A SL ++M PNDVT+SILI ++CK L AL L K G V +
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C +LGK++ EM G PNV Y LIS YC
Sbjct: 431 LISGHC-------------------KLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G L +A ++++M GIS N T+ LI GLC R+ + K+ E +
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF------GEMVEWN 525
Query: 308 ISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ P YN ++ G +E A E L +M + L P I G C G V +A+
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585
Query: 362 RCFDQMIEE--------GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+ + E G +PNVV Y LI+ C+ + +A L +EM LP +T
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNT 645
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRG-----------------IGR------------- 443
+ L L +GN+ A++L + + G +GR
Sbjct: 646 YACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 705
Query: 444 -GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI--CLSQQTT 499
G P YS +I C +G + A L M+ +G+ PD + +N L+ C++ + T
Sbjct: 706 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELT 764
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 131/320 (40%), Gaps = 74/320 (23%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ F +I GL A + + K + +N+ P+ +N +++ KE + RAF
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG-NTVRAFE 551
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR--------GVKPNSVIY 119
+M+ G+ D YTY L+ GLC T RV + + ++ ++ G PN V Y
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTY 611
Query: 120 NTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNAL----VLLE 171
LI+ LCK G + +A R +++ PN T++ + E N+ A+ VLLE
Sbjct: 612 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 671
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE---ESG-------------EQGRLG 215
GF+ + VT ++ C +GR+ +A E+L +SG E R G
Sbjct: 672 -----GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 726
Query: 216 KVKGGCRFLK-----------------------------------EMERKGCLPNVDTYN 240
+K + + +M R+G PN TYN
Sbjct: 727 DLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 786
Query: 241 ILISSYCETGVLDSALDVFN 260
LI C + S D F+
Sbjct: 787 SLIHGTCLMSSVSSTADYFS 806
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 230/494 (46%), Gaps = 33/494 (6%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
PH P I +I R+++ + + + + P FN++L +L+K +
Sbjct: 86 PHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNF 145
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+A+ V+ D Y++ I++KG C + GF++L M+ G+ PN V+Y T
Sbjct: 146 -FEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 204
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI CKNG + R + L M E N T+++LI + K + + L EK G
Sbjct: 205 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 264
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
VP+V T ++ C+ G++ +A E+ +E M +G NV
Sbjct: 265 IVPNVYTYNSMICRCCNDGKLNNAFELFDE-------------------MRERGVACNVV 305
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN LI C+ + A + MK DG+S N ++Y+TLI G CS G +D + M
Sbjct: 306 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 365
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ S G ++ YN ++ G + +++ME L P V ++ +
Sbjct: 366 KSS--GQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 423
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+E A + + M + G V ++ IY LIH C ++EAS+L K + P +N
Sbjct: 424 NIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 483
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ G C++G+ AL+L++E +G G +P Y+ I+ LC+ + A +LL
Sbjct: 484 TMIYGYCKEGSSYRALRLLKE----MGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKD 539
Query: 475 MVGKGILPDYLTWN 488
M+ G+ P WN
Sbjct: 540 MIELGLKPSISIWN 553
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 215/437 (49%), Gaps = 31/437 (7%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+D F+R+ M+ V+ Y+ I++ GLC V G KL+ + ++GVK N V YN
Sbjct: 210 VDSCLRFFRR-MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 268
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSF 176
I K +G +++ ME+ N VT+++LI + + A L E+
Sbjct: 269 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 328
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G DV T ++ C R G VK EM KG +P+
Sbjct: 329 GIEADVYVYTSIISCNC-------------------RSGNVKRALVLFDEMTDKGLIPSA 369
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI C+ G +++A + N+M+ GI N V ++TLI G C G +D+ L++ +
Sbjct: 370 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 429
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
ME K+G + + YNS+ GL + N++DEA L M + + P + + I +C +
Sbjct: 430 ME--KKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKE 487
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GN +AKR F +M E+G VPN++ Y+ LI Y + ++EA +L E+ G +P T
Sbjct: 488 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 547
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+++ G C G V ALKL +E + RG +P Y+ +I L + G + A L +
Sbjct: 548 TSLIHGECIDGKVDMALKLFDEMPQ---RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 604
Query: 475 MVGKGILPDYLTWNSLL 491
M G+ PD ++SL+
Sbjct: 605 MKETGLTPDDTVYSSLV 621
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 180/393 (45%), Gaps = 26/393 (6%)
Query: 52 ILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR 110
+LD L K D+++ R ++ A GV+ + TY ++G +G ++L +M+
Sbjct: 235 VLDGLCKRGDVEMGRKLM-DEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 293
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNA 166
GV N V Y LIH GK+ A+ L +M E DV ++ +I C+ N+ A
Sbjct: 294 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 353
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------------- 212
LVL ++ G +P T ++ +C G++ A ++ E +G
Sbjct: 354 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 413
Query: 213 --RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G V R ME+KG +V YN + S C+ D A + M G+S N
Sbjct: 414 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 473
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
+++ TLI C G + ++ + ME+ +G+ I YN ++ G + EA +
Sbjct: 474 TMSFTTLIDIYCKEGNFVEAKRVFREMEE--KGNVPNIITYNVLIDGYSKRGNMKEAHKL 531
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
++E L P + I G C+DG V+ A + FD+M + G VPNVV Y +I +
Sbjct: 532 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 591
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ R EA +L EM G P + +++++ L
Sbjct: 592 DGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 33/246 (13%)
Query: 48 IFNSILDV-----LVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
IFN+++D +V E + L +K G++ D + Y + GLC NR +
Sbjct: 406 IFNTLIDGYCESGMVDEALRLQVVMEKK-----GLESDVFAYNSIASGLCKLNRKDEAKG 460
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M RGV PN++ + TLI CK G A+ + +MEE PN +T+++LI Y
Sbjct: 461 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 520
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K N+ A L ++ + G +PDV T T ++ G +D GKV
Sbjct: 521 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIH-----GECID--------------GKVD 561
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ EM ++G +PNV TY +IS + G + A ++++MK G++ + Y +L+
Sbjct: 562 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621
Query: 279 RGLCSG 284
L S
Sbjct: 622 GSLHSA 627
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 241/529 (45%), Gaps = 82/529 (15%)
Query: 27 INDVVKATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDY 82
I + A DL S R PS+ F ++ V+V+ E DL + Y +KM ++ D Y
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLY-QKMERKQIRCDIY 115
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
++ IL+K C +++ + G+ P+ V +NTL+H LC +V A +L M
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQM 175
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
E PN VTF+ L+ C+E +V A+ LL++ G P +T +++ +C G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ A+ +L + E + +PNV Y+ +I S C+ G A ++
Sbjct: 236 VSALNLLRKMEEVSHI------------------IPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSV 314
F +M+ GI + TY+++I G CS GR D ++LQ M + K ISP YN++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK------ISPDVVTYNAL 331
Query: 315 LYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ +E + EA E +M + P + S I GFC ++ A+ F M +G
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN++ ++ LI YC +R+ + EL+ EMT G + +T+NT++ G G++ AL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 433 LVEE-------------------------------------------DMRGIGRGSLPGS 449
L++E D G P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
Y+ LI L +G F A L +M +GI+PD +T++S++ L +Q+
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 236/502 (47%), Gaps = 44/502 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T++ GL +++ + + P++ F ++++ L +E +
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVAL 206
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS-RGVKPNSVIYNTLIHSLC 127
+MM G+Q TY ++ G+C LL M+ + PN VIY+ +I SLC
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLC 266
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G+ A++L ++M+E P+ T++ +I +C +A LL++ PDVV
Sbjct: 267 KDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVV 326
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ G+ +A E+ + EM +G +PN TY+ +I
Sbjct: 327 TYNALINAFVKEGKFFEAEELYD-------------------EMLPRGIIPNTITYSSMI 367
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ LD+A +F M G S N +T++TLI G C RIDDG+++L M ++ G
Sbjct: 368 DGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTET--G 425
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN++++G Y + AL+ L++M L P V + G C +G ++DA
Sbjct: 426 LVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485
Query: 362 RCFDQMIEE-----------GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F M + G P+V Y+ LI E + EA EL +EM G +P
Sbjct: 486 EMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPD 545
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSAS 469
T+++++ GLC+Q + A ++ + +G S P ++ LI C+ G
Sbjct: 546 TITYSSMIDGLCKQSRLDEATQMFD----SMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L +M +GI+ + +T+ +L+
Sbjct: 602 ELFCEMGRRGIVANAITYITLI 623
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 231/486 (47%), Gaps = 44/486 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
P + + T++ G+ + D V A +L+ + ++ P++ I+++I+D L K+
Sbjct: 217 PTQITYGTIVDGMCKK---GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ D +TY ++ G C + R D +LL M R + P+ V YN LI+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T+S +I +CK+ L A + + G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+++T +++ C R+ D +E+L E M G + + TYN
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHE-------------------MTETGLVADTTTYN 434
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI + G L++ALD+ +M G+ + VT DTL+ GLC G++ D L++ ++M+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 301 KE---------GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
K+ G + + YN ++ GL E + EA E ++M + P + S I
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C +++A + FD M + PNVV + LI+ YC+ RV + EL EM G +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
A T+ T++ G + GN+ AL + +E I G P + ++ L K + A
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQE---MISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 470 MLLVQM 475
+L ++
Sbjct: 672 AMLEKL 677
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + ++I G + ++ L++ +P+L FN+++D + ID
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M +G+ D TY L+ G L + LL M S G+ P+ V +TL+ LC
Sbjct: 418 LHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 128 KNGKVGRARSLMSDME---------------EPNDVTFSILICAYCKEENLVNALVLLEK 172
NGK+ A + M+ EP+ T++ILI E + A L E+
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
G VPD +T + +++ LC R+ +A ++ + G K
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-------------------KSF 577
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV T+ LI+ YC+ G +D L++F +M GI N +TY TLI G G I+ L
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
I Q M S G ++L GL+ + + A+ L++++
Sbjct: 638 IFQEMISS--GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 229/494 (46%), Gaps = 33/494 (6%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
PH P I +I R+++ + + + + P FN++L +L+K +
Sbjct: 73 PHLDSFPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNF 132
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+A+ V+ D Y++ I++KG C + GF++L M+ G+ PN V+Y T
Sbjct: 133 -FEKAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTT 191
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI CKNG + R + L M E N T+++LI + K + + L EK G
Sbjct: 192 LIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTG 251
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
VP+V T ++ C+ G++ +A E+ +E M +G NV
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDE-------------------MRERGVACNVV 292
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN LI C+ + A + MK DG+S N ++Y+TLI G CS G +D + M
Sbjct: 293 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 352
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ S G ++ YN ++ G + +++ME L P V ++ +
Sbjct: 353 KSS--GQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSD 410
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+E A + + M + G V ++ IY LIH C ++EAS+L K + P +N
Sbjct: 411 NIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYN 470
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ G C++G+ AL+L++E +G G +P Y+ I LC+ + A +LL
Sbjct: 471 TMIYGYCKEGSSYRALRLLKE----MGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKD 526
Query: 475 MVGKGILPDYLTWN 488
M+ G+ P WN
Sbjct: 527 MIELGLKPSISIWN 540
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 151/573 (26%), Positives = 256/573 (44%), Gaps = 80/573 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P E+ +++ GL + + + + V+ F ++P++ ++N+++D L K + D A
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELL 389
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G+ +D TY+IL+ C ++ L M G+KP+ YN+LI+ C
Sbjct: 390 F-DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHC 448
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A SLM++M EP VT++ L+ YC + + AL L + G VP +
Sbjct: 449 KFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIY 508
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +L L G + DAV++ E E VK PN TYN++I
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFTEMAEW----NVK---------------PNRVTYNVMI 549
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YCE G + A + N+M GI + +Y LI GLC G+ + ++ D
Sbjct: 550 EGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA----KVFVDGLHK 605
Query: 304 SKGRISP--YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
++ Y +L+G RE + +EAL + M R VD L G +DG+++
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGL---RGVDLDLVCYGVLIDGSLKHKD 662
Query: 362 R-----CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
R +M + G P+ VIY +I A + +EA + M G +P T+
Sbjct: 663 RKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 417 VLSGLCRQGNVGTA--------------------------------LKLVEEDMRGIGRG 444
V++GLC+ G V A +K E I +G
Sbjct: 723 VINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKG 782
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLL 504
L + Y+ LI+ C +G + AS L+ +M+G G+ PD +T+ +++ L ++
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRR------- 835
Query: 505 LLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
N++ + + + ++ K R + N L HG
Sbjct: 836 --NDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 219/482 (45%), Gaps = 65/482 (13%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
R+++ V+ ++++ ++ P ++ +++L LVK LA + M+ G++ D Y
Sbjct: 171 RVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELF-DDMINVGIRPDVYI 229
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +++ LC + +++ M++ G N V YN LI LCK KV A + D+
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+P+ VT+ L+C CK + L ++++ F P ++ ++E L G+V
Sbjct: 290 GKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVE 349
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+ +++ E G PN+ YN LI S C+ D A +F
Sbjct: 350 EALNLVKRVAEFG-------------------VSPNIFVYNALIDSLCKGRNFDEAELLF 390
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ N VTY LI C G++D L L M D G K + PYNS+
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDM--GLKPSVYPYNSL----- 443
Query: 320 RENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
I G C G++ A+ +MI + P VV Y
Sbjct: 444 ----------------------------INGHCKFGDISAAESLMAEMINKKLEPTVVTY 475
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
L+ YC + ++ +A L EMTG G +P TF T+LSGL R G + A+KL E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE 535
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
+ P Y+ +I+ CE+G A L +M+ KGI+PD ++ L+ +CL+ Q
Sbjct: 536 WNVK---PNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 498 TT 499
+
Sbjct: 593 AS 594
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 193/461 (41%), Gaps = 71/461 (15%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ PS+ +NS+++ K DI A + +M+ ++ TY LM G C ++
Sbjct: 433 LKPSVYPYNSLINGHCKFGDISAAESLM-AEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+L H M +G+ P+ + TL+ L + G + A L ++M E PN VT++++I
Sbjct: 492 LRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEG 551
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE-------ESG 209
YC+E N+ A L + G VPD + ++ LC G+ +A ++ E
Sbjct: 552 YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 210 EQGRLGKVKGGCR--------------------------------------------FLK 225
E G + G CR LK
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLK 671
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +G P+ Y +I + +TG A +++ M +G N VTY +I GLC G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE------NQQDEALEYLKQMEK-LF 338
+++ + M G P N V YG + + +A+E + K L
Sbjct: 732 FVNEAEILCSKMR------PGNSVP-NQVTYGCFLDILTKGVGDMKKAVELHNAILKGLL 784
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
++ I GFC G +E+A +MI +G P+ + Y +I C+ V++A EL
Sbjct: 785 ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIEL 844
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
MT G P +NT++ G C G +G A +L E +R
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 193/418 (46%), Gaps = 29/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P F T++ GL RA +I D VK ++ +N+ P+ +N +++ +E ++++AF
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEG-NMSKAFE 563
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D Y+Y L+ GLCLT + + + + + N + Y L+H C
Sbjct: 564 FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ A S+ DM + + V + +LI K ++ L LL++ G PD V
Sbjct: 624 REGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDV 683
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G +A I + M +GC+PN TY +I
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDL-------------------MINEGCVPNEVTYTAVI 724
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G ++ A + + M+ N VTY + L G + D K ++L +G
Sbjct: 725 NGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKG--VGDMKKAVELHNAILKG 782
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN ++ G R+ + +EA E + +M + + P + + I C +V+ A
Sbjct: 783 LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI 842
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
++ M E+G P+ V Y+ LIH C + +A+EL EM G P T T +S
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTIS 900
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 85/231 (36%), Gaps = 55/231 (23%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M G++ DD Y ++ T + F + +M + G PN V Y +I+ LCK
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 730
Query: 130 GKVGRARSLMSDMEEPNDV---------------------------------------TF 150
G V A L S M N V T+
Sbjct: 731 GFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATY 790
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
++LI +C++ + A L+ + G PD +T T ++ LC V A+E+ E
Sbjct: 791 NMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTE 850
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+G G++ EM R+G PN +T IS+
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 208/450 (46%), Gaps = 33/450 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL R ++ V D + P L + +++ L K DIDLA +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KKM ++ Y ++ LC V D L M ++G++PN V YN+LI LC
Sbjct: 244 L-KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTFS LI A+ KE LV A L ++ PD+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A + E M K C PNV TYN LI
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTYNTLI 403
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ +D +++F +M G+ N VTY TLI G D+ + + M +G
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM--VSDG 461
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I Y+ +L GL + + AL EYL Q K+ P ++ I G C G VED
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYL-QRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G PNVV Y ++ +C++ EA L +EM G LP + T+NT++
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 421 LCRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVGDASTIG 610
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 225/496 (45%), Gaps = 34/496 (6%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DI 61
++S P SI F ++ + + + V+ + + ++ +L ++ +++ + +
Sbjct: 73 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL 132
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
LA A KMM G + D T L+ G C NR+ D L+ M G +P+S +NT
Sbjct: 133 SLALAVL-AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LIH L ++ + A +L+ M +P+ VT+ I++ CK ++ AL LL+K
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P VV +++ LC+ V DA+ + EM+ KG PNV
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLF-------------------TEMDNKGIRPNVV 292
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN LI C G A + +DM I+ N VT+ LI G++ + K+ M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
K I Y+S++ G ++ DEA + M + FP V + I GFC
Sbjct: 353 --IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V++ F +M + G V N V Y LIH + Q A + K+M G LP T++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+L GLC G V TAL + E R P Y+ +I+ +C+ G + L +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKME---PDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 476 VGKGILPDYLTWNSLL 491
KG+ P+ +T+ +++
Sbjct: 528 SLKGVKPNVVTYTTMM 543
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+++F DM + V + L+ + + D + + + M++ G + Y
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--GISHNLYTY 119
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+ ++ R +Q AL L +M KL P V + + GFC + DA QM+E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+ ++ LIH + R EA L+ M G P T+ V++GLC++G++
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 430 ALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL L+++ + +G + PG Y+ +I ALC A L +M KGI P+ +T+N
Sbjct: 240 ALSLLKK----MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 489 SLLICLSQQTTW 500
SL+ CL W
Sbjct: 296 SLIRCLCNYGRW 307
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D ++DA F M++ P++V + L+ A + + L ++M G T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ +++ CR+ + AL ++ + M+ G P + L+ C A L+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMK---LGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 474 QMVGKGILPDYLTWNSLL 491
QMV G PD T+N+L+
Sbjct: 176 QMVEMGYQPDSFTFNTLI 193
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 215/437 (49%), Gaps = 31/437 (7%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+D F+R+ M+ V+ Y+ I++ GLC V G KL+ + ++GVK N V YN
Sbjct: 206 VDSCLRFFRR-MVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYN 264
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSF 176
I K +G +++ ME+ N VT+++LI + + A L E+
Sbjct: 265 AFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREK 324
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G DV T ++ C R G VK EM KG +P+
Sbjct: 325 GIEADVYVYTSIISCNC-------------------RSGNVKRALVLFDEMTDKGLIPSA 365
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI C+ G +++A + N+M+ GI N V ++TLI G C G +D+ L++ +
Sbjct: 366 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 425
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
ME K+G + + YNS+ GL + N++DEA L M + + P + + I +C +
Sbjct: 426 ME--KKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKE 483
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GN +AKR F +M E+G VPN++ Y+ LI Y + ++EA +L E+ G +P T
Sbjct: 484 GNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTC 543
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+++ G C G V ALKL +E + RG +P Y+ +I L + G + A L +
Sbjct: 544 TSLIHGECIDGKVDMALKLFDEMPQ---RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 600
Query: 475 MVGKGILPDYLTWNSLL 491
M G+ PD ++SL+
Sbjct: 601 MKETGLTPDDTVYSSLV 617
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 180/393 (45%), Gaps = 26/393 (6%)
Query: 52 ILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR 110
+LD L K D+++ R ++ A GV+ + TY ++G +G ++L +M+
Sbjct: 231 VLDGLCKRGDVEMGRKLM-DEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE 289
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNA 166
GV N V Y LIH GK+ A+ L +M E DV ++ +I C+ N+ A
Sbjct: 290 GVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRA 349
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------------- 212
LVL ++ G +P T ++ +C G++ A ++ E +G
Sbjct: 350 LVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDG 409
Query: 213 --RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G V R ME+KG +V YN + S C+ D A + M G+S N
Sbjct: 410 YCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPN 469
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
+++ TLI C G + ++ + ME+ +G+ I YN ++ G + EA +
Sbjct: 470 TMSFTTLIDIYCKEGNFVEAKRVFREMEE--KGNVPNIITYNVLIDGYSKRGNMKEAHKL 527
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
++E L P + I G C+DG V+ A + FD+M + G VPNVV Y +I +
Sbjct: 528 KDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSK 587
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ R EA +L EM G P + +++++ L
Sbjct: 588 DGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 33/246 (13%)
Query: 48 IFNSILDV-----LVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
IFN+++D +V E + L +K G++ D + Y + GLC NR +
Sbjct: 402 IFNTLIDGYCESGMVDEALRLQVVMEKK-----GLESDVFAYNSIASGLCKLNRKDEAKG 456
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M RGV PN++ + TLI CK G A+ + +MEE PN +T+++LI Y
Sbjct: 457 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 516
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K N+ A L ++ + G +PDV T T ++ G +D GKV
Sbjct: 517 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIH-----GECID--------------GKVD 557
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ EM ++G +PNV TY +IS + G + A ++++MK G++ + Y +L+
Sbjct: 558 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Query: 279 RGLCSG 284
L S
Sbjct: 618 GSLHSA 623
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/526 (27%), Positives = 247/526 (46%), Gaps = 74/526 (14%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYR 69
E ++I +R GR I + V + + FN PS++ +N+I+++LV+ D A Y
Sbjct: 76 EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYM 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY---------- 119
+ M G+ D YT+ I MK C T+R +LL+ M S+G + ++V Y
Sbjct: 136 R-MRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEE 194
Query: 120 -------------------------NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
N LIH+LC+ G V + L++ + + PN T
Sbjct: 195 NHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTV 254
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+I I +C+ L A+ LL+ G PDV+T ++ LC +V++A
Sbjct: 255 NIFIQGFCQRAMLNEAIRLLD-GVGRGLTPDVITYNTLICGLCKNFKVVEAE-------- 305
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
+L++M +G P+ TYN +I YC+ G++ +A + D G +
Sbjct: 306 -----------HYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPD 354
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
TY +LI GLC G ID + + E ++G K + N+++ GL ++ +AL+
Sbjct: 355 ESTYCSLINGLCQDGDIDRAINVFN--EAMEKGLKPNLVLCNTLVKGLSQQGLILQALKL 412
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+ +M + P +L I G C G V DA I +G +P+V ++ LI YC+
Sbjct: 413 MNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCK 472
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG---NVGTALKLVEEDMRGIGRGS 445
+ ++ A E++ M HG P T+N++L+GLC+ G +V KL+ E +G
Sbjct: 473 KLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME------KGC 526
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+P Y+ L ++ C+ + A L+ +M KG+ PD + + +L+
Sbjct: 527 VPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 239/473 (50%), Gaps = 32/473 (6%)
Query: 18 IRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGV 77
I+G + M+N+ ++ D V R +TP + +N+++ L K + Y +KM+ G
Sbjct: 258 IQGFCQRAMLNEAIRLLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGY 316
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ D +TY ++ G C + + ++L +G P+ Y +LI+ LC++G + RA +
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376
Query: 138 LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
+ ++ E PN V + L+ ++ ++ AL L+ + G PD+ T V+ LC
Sbjct: 377 VFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC 436
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+G V DA ++ ++ +G L P+V T+N LI YC+ LD
Sbjct: 437 KIGCVSDADNLVIDAIAKGHL-------------------PDVFTFNTLIDGYCKKLKLD 477
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+A+++ + M G+S + +TY++++ GLC G+ +D + +LM + +G I YN
Sbjct: 478 NAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME--KGCVPNIITYNI 535
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ + + +EAL +++M+ L P V+ + GFC +G+++ A + F ++ E+
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Query: 372 GVPN-VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
+ + Y+ +I+A+ + + A +L +M +G+ P + T+ ++ G C+ GN+ +
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSG 655
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+ + I +G +P + ++ LC K A ++ MV KGI+P+
Sbjct: 656 YSFL---LVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPE 705
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 138/537 (25%), Positives = 228/537 (42%), Gaps = 95/537 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSR---FNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ TVI G N V+A +L + P + FN ++ L ++
Sbjct: 184 YCTVIGGFYEE---NHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLN 240
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ GV + +T I ++G C + + +LL + RG+ P+ + YNTLI LCKN
Sbjct: 241 KVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNF 299
Query: 131 KVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A R ++++ EP+ T++ +I YCK + NA +L GFVPD T
Sbjct: 300 KVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYC 359
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC G + A+ + E+ E+G + G + + + EM
Sbjct: 360 SLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSEN 419
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC P++ TYN++I+ C+ G + A ++ D G + T++TLI G C ++D+
Sbjct: 420 GCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNA 479
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
++I+ M + G + YNS+L GL
Sbjct: 480 IEIVDRMWN--HGVSPDVITYNSILNGL-------------------------------- 505
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G ED F M+E+G VPN++ Y+ L ++C+ +V EA L++EM G P
Sbjct: 506 -CKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPD 564
Query: 411 ASTFNTVLSGLCRQGNVGTALKL---VEEDMRG--------------------------- 440
F T++ G C G++ A +L V+E +
Sbjct: 565 VVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLF 624
Query: 441 ---IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
G P S Y +I C+ G S L+ + KG++P T+ +L CL
Sbjct: 625 NKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 198/419 (47%), Gaps = 30/419 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + ++I G + M+ + + + P + S+++ L ++ DID A
Sbjct: 318 PDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINV 377
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M G++ + L+KGL + KL++ M G P+ YN +I+ LC
Sbjct: 378 FNEAM-EKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC 436
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A +L+ D P+ TF+ LI YCK+ L NA+ ++++ ++ G PDV+
Sbjct: 437 KIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVI 496
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L LC G+ D + K M KGC+PN+ TYNIL
Sbjct: 497 TYNSILNGLCKAGKYEDVMGTF-------------------KLMMEKGCVPNIITYNILT 537
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S+C+ ++ AL++ +M+ G++ + V + TL++G C G +D ++ + +++ +
Sbjct: 538 ESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKF 597
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAK 361
S I+ YN ++ + + A + +M E F P + + I GFC GN+
Sbjct: 598 SH-TIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGY 656
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
IE+G +P++ + +++ C + RV EA ++ M G +P NT+
Sbjct: 657 SFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVP--EVVNTIFEA 713
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 44/336 (13%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR GK++ + M+ C P+V +YN +++ E D A V+ M+ GI +
Sbjct: 87 GRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDV 146
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
T+ ++ C R ++L M +G + Y +V+ G Y EN + EA E
Sbjct: 147 YTFTIRMKSFCRTSRPHAARRLLNNM--PSQGCESSAVAYCTVIGGFYEENHRVEAHELF 204
Query: 332 KQM----------------------------EKLFPRAVDRSLK---------ILGFCVD 354
++M E+L + + R + I GFC
Sbjct: 205 EEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQR 264
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ +A R D + G P+V+ Y+ LI C+ +V EA +++M GY P T+
Sbjct: 265 AMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTY 323
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+++ G C+ G + A +++ + G +G +P Y LI LC+ G A + +
Sbjct: 324 NSIIDGYCKLGMMQNADQILRD---GAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNE 380
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLL-LLNEM 509
+ KG+ P+ + N+L+ LSQQ L L L+NEM
Sbjct: 381 AMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEM 416
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 214/449 (47%), Gaps = 31/449 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
KKM + G+ D YT I++ C NRV +L + G +P++ + TL+ LC
Sbjct: 80 KKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVV 139
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK+G A + M +PN VT+ L+ CK+ L AL L + + G PD+ T
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTY 199
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ LC+ L + K L EM + +PNV + NI++ +
Sbjct: 200 NSLIHALCN-------------------LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDA 240
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G + A DV + M G+ + VTY L+ G C +D+ +K+ +M + G
Sbjct: 241 LCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM--VRNGCV 298
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ YN+++ G + + D+A+ ++M ++L P + S I G C G ++DA
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIAL 358
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F++M+ G +PN+V Y L+ C+ R+ EA L+K + G P +N + G+CR
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCR 418
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G++ A L RG P ++ +I+ LC++G AS L +M G L +
Sbjct: 419 AGDLEAARDLFS---NLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRN 475
Query: 484 YLTWNSLLICLSQQT-TWLLLLLLNEMVS 511
T+N++ L Q T + LL EM++
Sbjct: 476 GCTYNTITQGLLQNNKTSRAIQLLEEMLA 504
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 202/459 (44%), Gaps = 34/459 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
PPD VI ++ + + + P F +++ L + E +D
Sbjct: 88 PPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALD 147
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ KM+ G Q + TY LM GLC ++ + L M ++G+ P+ YN+L
Sbjct: 148 VF-----DKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
IH+LC + +L+++M + PN V+ +I++ A CKE + A +++ G
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
PDVVT +++ C + +AV++ + G ++ ++
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+EM R+ +PN TY+ LI C G L A+ +FN+M G N VTY L+ LC
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLC 382
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
R+ + + +L+ +E S ++ YN + G+ R + A + + L P
Sbjct: 383 KNHRLAEAMALLKAIEGSNLDPDVQV--YNIAIDGMCRAGDLEAARDLFSNLAPRGLQPD 440
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I G C G +++A + F +M E G + N Y+ + Q + A +L++
Sbjct: 441 VWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLE 500
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
EM G+ ST ++ L G + +++ E MR
Sbjct: 501 EMLARGFSADVSTTALLVKMLSDDGLDQSVKQILCEFMR 539
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 184/400 (46%), Gaps = 30/400 (7%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TF 150
N + D H M P + L+ S+ K SL M+ P DV T
Sbjct: 35 NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+I+I ++C + AL +L K G PD T T ++ LC VG++ +A+++ ++
Sbjct: 95 TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDK--- 151
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M +G PNV TY L++ C+ L AL++F++M GIS +
Sbjct: 152 ----------------MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPD 195
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
TY++LI LC+ +L M SK + N V+ L +E + EA +
Sbjct: 196 IFTYNSLIHALCNLCEWKHVTTLLNEMVKSK--IMPNVVSLNIVVDALCKEGKVTEAHDV 253
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+ M + + P V + + G C+ +++A + FD M+ G V NVV Y+ LI+ YC+
Sbjct: 254 VDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCK 313
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+R+ +A L +EM +P T++T++ GLC G + A+ L E + G +P
Sbjct: 314 IQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNE---MVACGQIPN 370
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
YS L+ LC+ A LL + G + PD +N
Sbjct: 371 LVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYN 410
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 209/413 (50%), Gaps = 30/413 (7%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
++++ GLC + RV D +LL M GV N++ YN+L+ + GR + ++ ME
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
E T++IL+ + ++ L + + V DV T V+ C G +
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A ++L+E +G G PN TY +LI+ +C+ G +++A +
Sbjct: 301 AAKVLDEC-----VGN--------------GVEPNERTYGVLINGFCKIGQMEAAEMLLA 341
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DM+ G+ N + ++T+I G C G +DD LKI ME K G + I YN++ GL R
Sbjct: 342 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAME--KMGVELDIYTYNTLACGLCR 399
Query: 321 ENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
N+ DEA L M ++ P V + I C DG++ +A+R F +M E+G P+VV
Sbjct: 400 VNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 459
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ +I Y ++ +REA KEM G++P T+ +++ G C G V ALKL EE
Sbjct: 460 YNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 519
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ RG+ P Y+ LI L ++G ++A L M+ G++PD +++L+
Sbjct: 520 Q---RGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 190/411 (46%), Gaps = 27/411 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
V+ GL ++ ++D + D + R ++ + +NS+LD V++ D + M G
Sbjct: 183 VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 242
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
++ TY IL+ L + L + MK+ V + +Y +I++ C+ G + RA
Sbjct: 243 IEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAA 302
Query: 137 SLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ + EPN+ T+ +LI +CK + A +LL G + + +++
Sbjct: 303 KVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGY 362
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C G V DA+ K+K ME+ G ++ TYN L C L
Sbjct: 363 CRKGMVDDAL-------------KIKAA------MEKMGVELDIYTYNTLACGLCRVNRL 403
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A + + M G+ N+VTY TLI C G + + ++ + M +++G+ + YN
Sbjct: 404 DEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM--AEKGATPSVVTYN 461
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ G ++ EA + K+MEK P + + G CV+G V+ A + F++M +
Sbjct: 462 VMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQR 521
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
G PNVV Y LI +E R A +L +M G +P S ++ ++ L
Sbjct: 522 GTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 160/333 (48%), Gaps = 24/333 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ ++ L AR I+ V + + N+ + ++ ++++ + A + +
Sbjct: 250 YTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECV 309
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+GV+ ++ TY +L+ G C ++ LL M+ +GV N +I+NT+I C+ G V
Sbjct: 310 GNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVD 369
Query: 134 RARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A + + ME E + T++ L C C+ L A LL G VP+ VT T ++
Sbjct: 370 DALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLI 429
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
+ C G +++A + E E+G + G ++ RF KEME+KG +
Sbjct: 430 SIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFV 489
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+V TY L+ +C G +D AL +F +MK G N V Y LI GL GR +
Sbjct: 490 PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSE---AA 546
Query: 294 LQLMEDS-KEGSKGRISPYNSVLYGLYRENQQD 325
QL +D K G S Y++++ L+ +N++D
Sbjct: 547 FQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 579
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 217/462 (46%), Gaps = 25/462 (5%)
Query: 49 FNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+N+++ L + DLA A Y M+ SG + D YT+ L+ G C TN+V L M
Sbjct: 14 YNAVIRSLCRR-ADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL 167
RG + V Y LI C+ G++ A L +M++P+ ++ L+ CK L
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGL 132
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------------- 212
++L + G+ P V++ C + +A E+L+E E+G
Sbjct: 133 LMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY 192
Query: 213 -RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ G++ R L+ M+ +GC PNV TYN L+ +C G + A+ + N M++ G++ +
Sbjct: 193 CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDA 252
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VTY+ LIRG C G I+ ++L+LME +G YN+++ L ++ + D+A
Sbjct: 253 VTYNLLIRGQCIDGHIESAFRLLRLMEG--DGLIADQYTYNALINALCKDGRTDQACSLF 310
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+E + P AV + I G C G V+ A + ++M+ G P+ Y I C+
Sbjct: 311 DSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 370
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+ +E + EM P + V+ L ++ N G + E + G P
Sbjct: 371 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGE---MVSSGCNPDV 427
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ ++A C +G A +L++M G+ D + +N+L+
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLM 469
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 225/513 (43%), Gaps = 42/513 (8%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMA 74
VI + ++D ++ +L+ P++ +N+++ E + A A KM
Sbjct: 187 AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALL-NKMRV 245
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
GV D TY +L++G C+ + F+LL +M+ G+ + YN LI++LCK+G+ +
Sbjct: 246 CGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQ 305
Query: 135 ARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A SL +E +PN VTF+ LI CK + A LEK S G PD T + +E
Sbjct: 306 ACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365
Query: 191 LLCSVGRVMDAVEILEESGEQG-------------RLGKVKGG---CRFLKEMERKGCLP 234
LC + + + + E ++ +L K + R EM GC P
Sbjct: 366 HLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 425
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V TY + +YC G L+ A +V +M +G++ + + Y+TL+ G S G+ D + IL
Sbjct: 426 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485
Query: 295 QLMEDSKEGSKG-----------RISPYNSVL----YGLYRENQQDEALEYLKQMEK--L 337
+ M R+ VL G+++ + + M+K
Sbjct: 486 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 545
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + S + GF DG E+A M E+ N IY L+ +C+ +R +A
Sbjct: 546 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 605
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L+ M HG++P ++ +LSGL +G A ++ M + P + +I
Sbjct: 606 LVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIF---MNSRWKDYSPDEIVWKVIID 662
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L +KG + +++ + P + T+ L
Sbjct: 663 GLIKKGHSDISREMIIMLERMNCRPSHQTYAML 695
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 150/286 (52%), Gaps = 11/286 (3%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R + R+L M R G P+ T+N LI YC T +D A D+F+ M + G + + V
Sbjct: 23 RRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVV 82
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+Y LI G C GRID+ +++ M+ + Y +++ GL + + +E L L+
Sbjct: 83 SYAALIEGFCETGRIDEAVELFGEMDQPD------MHMYAALVKGLCKAGRGEEGLLMLR 136
Query: 333 QMEKLFPRAVDRSLK-ILGF-CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M++L R R+ ++ F C + ++A+ +M E+G P VV +I+AYC+E
Sbjct: 137 RMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 196
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ +A +++ M G P T+N ++ G C +G V A+ L+ + MR G P +
Sbjct: 197 RMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNK-MRVCGVN--PDAV 253
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y+ LI+ C G +SA LL M G G++ D T+N+L+ L +
Sbjct: 254 TYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299
>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
Length = 1161
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 239/512 (46%), Gaps = 30/512 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PDE + T+I G R IN + + R N+ PS+ + +++D + ID A +
Sbjct: 328 PDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSI 387
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +GV + TY+ L+ G C + +G L+ +KSRG+ N + LI C
Sbjct: 388 L-SEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFC 446
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ +A+ ++ M E P+ +T+S LI C+ + +L + G +P+ V
Sbjct: 447 QVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 506
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C G V +A++ + +G R G + F + M
Sbjct: 507 LYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYM 566
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R + ++N +I SYC G + A V++DM G S N TY L+RGLC GG +
Sbjct: 567 SRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHL 626
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ + + D + +N++L G+ R DEAL+ ++M K P +
Sbjct: 627 VQARQFMSCLLDIPFAIDEKT--FNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYT 684
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT-G 404
+ + GFC G + A M+E+G VP+ V Y CL++ E +V+ AS + E+
Sbjct: 685 ILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICK 744
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G +N++++G + NV T +K + DM P S Y+ L+ ++G
Sbjct: 745 EGLYADCIAYNSLMNGYLKSRNVNT-IKRMMSDM--YQNEVYPNSASYNILMHGYVKRGQ 801
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
F + L MV KGI PD +T+ L++ LS+
Sbjct: 802 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 833
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 213/471 (45%), Gaps = 39/471 (8%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+N+IL VK+ A + M VQ D YTY I++ LC R F LL M+
Sbjct: 263 YNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMR 322
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
+ P+ YNTLI+ + GK+ AR + + M P+ T++ +I YC+ +
Sbjct: 323 KDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRID 382
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------ 212
AL +L + G +P +T + +L C V + A+ ++E+ +G
Sbjct: 383 KALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILI 442
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
++G++ + LK M G P+V TY+ LI+ C + ++ + M+ GI
Sbjct: 443 DGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGIL 502
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
N V Y TLI C G + + LK ++ + G +N++L+ YRE EA
Sbjct: 503 PNDVLYTTLICYYCKAGYVKEALK--HFVDIYRRGLVANPVIHNALLHAFYREGMITEAE 560
Query: 329 EYLKQMEKL--------FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ + M ++ F R +D +C GN+ A +D M+ G PNV Y
Sbjct: 561 HFRQYMSRMNISFDSVSFNRIID------SYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQ 614
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ CQ + +A + M + + TFN +L G+CR G + AL L E +
Sbjct: 615 NLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCE---KM 671
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I LP Y+ L+ C KG A ++L M+ KG++PD + + LL
Sbjct: 672 IKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLL 722
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 214/477 (44%), Gaps = 59/477 (12%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M SG+ +D Y L+ C V + K + RG+ N VI+N L+H+ + G
Sbjct: 495 RMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREG 554
Query: 131 KVGRA---RSLMSDMEEPND-VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A R MS M D V+F+ +I +YC N+V A + + +G+ P+V T
Sbjct: 555 MITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQ 614
Query: 187 KVLELLCSVGRVMDAVEILE-------ESGEQGRLGKVKGGCRF---------LKEMERK 230
+L LC G ++ A + + E+ + G CR+ ++M +
Sbjct: 615 NLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKN 674
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID-- 288
CLP++ TY IL+S +C G + AL + M G+ + V Y L+ GL + G++
Sbjct: 675 NCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAA 734
Query: 289 ----------DGL---------------------KILQLMEDSKEGS-KGRISPYNSVLY 316
+GL I ++M D + + YN +++
Sbjct: 735 SYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMH 794
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
G + Q ++L K M + + P V L ILG G ++ A + ++M+ EG P
Sbjct: 795 GYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFP 854
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ +++D LI A+ ++ ++ A ++ M P + TF+ +++GL R+G + + K++
Sbjct: 855 DRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVL 914
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E ++ G P HY L+ A C G A L +M GI+P + +S++
Sbjct: 915 HEMLQV---GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSII 968
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/541 (23%), Positives = 226/541 (41%), Gaps = 63/541 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P++ ++ T+I +A + + +K + R + + I N++L +E + +
Sbjct: 503 PNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHF 562
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ M + D ++ ++ C + F + M G PN Y L+ LC+
Sbjct: 563 RQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQ 622
Query: 129 NGKVGRARSLMSDMEE-P---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +AR MS + + P ++ TF+ L+ C+ L AL L EK +PD+ T
Sbjct: 623 GGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHT 682
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGC------- 221
T +L C G+++ A+ IL+ E+G + G+VK
Sbjct: 683 YTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEII 742
Query: 222 -----------------------------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
R + +M + PN +YNIL+ Y + G
Sbjct: 743 CKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQF 802
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+L ++ M GI + VTY LI GL G ID +K L+ M EG ++
Sbjct: 803 SKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKM--VLEGIFPDRLVFD 860
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ +++ AL+ M+ L P + S I G G ++ + + +M++
Sbjct: 861 ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQV 920
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PN Y L++A C+ + A L +EM G +P ++++ GLCR G + A
Sbjct: 921 GLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEA 980
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ + MR G +P ++ L+ +LC++ A L M + D +++N L
Sbjct: 981 VIVFSSMMRS---GMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVL 1037
Query: 491 L 491
+
Sbjct: 1038 I 1038
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 199/488 (40%), Gaps = 62/488 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + +F +++ + R + D A + S N+IL+ LV+E
Sbjct: 153 PTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNALVEEGESKHVWL 212
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++ +A T IL+ LC +L MKS + NSV YNT++H
Sbjct: 213 FLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWYV 271
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ A ++ DME + + T++I+I C+ + A +LL++ PD
Sbjct: 272 KKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDEC 331
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ R GK+ M R+ +P+V TY +I
Sbjct: 332 TYNTLINGF-------------------FREGKINHARYVFNHMLRQNLVPSVATYTTMI 372
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D AL + ++M+I G+ + +TY L+ G C + + LMED K
Sbjct: 373 DGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAI---YLMEDLK-- 427
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
S+G + K M R++ I GFC G + AK+
Sbjct: 428 SRG---------------------ITINKTM---------RTILIDGFCQVGEISKAKQI 457
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G P+V+ Y LI+ C+ ++ E E++ M G LP + T++ C+
Sbjct: 458 LKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCK 517
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G V ALK + R RG + ++ L+ A +G A M I D
Sbjct: 518 AGYVKEALKHFVDIYR---RGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFD 574
Query: 484 YLTWNSLL 491
+++N ++
Sbjct: 575 SVSFNRII 582
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 166/355 (46%), Gaps = 27/355 (7%)
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+S + N V F +L+ AY KE +++A V + GF V+ +L L
Sbjct: 148 ISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPVSCNTILNAL------ 201
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+EE G+ K FL+E + V T NIL++S C G A D+
Sbjct: 202 ------VEE-------GESKHVWLFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDM 248
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
MK IS N VTY+T++ GR L +L+ ME ++ + + YN ++ L
Sbjct: 249 LQKMKSCHIS-NSVTYNTILHWYVKKGRFKAALCVLEDME--RDSVQADVYTYNIMIDKL 305
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R + A LK+M K L P + I GF +G + A+ F+ M+ + VP+V
Sbjct: 306 CRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSV 365
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y +I YC+ R+ +A ++ EM G +P T++ +L+G C+ +G A+ L+ E
Sbjct: 366 ATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLM-E 424
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
D++ RG + LI C+ G A +L M GI PD +T+++L+
Sbjct: 425 DLK--SRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALI 477
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 192/458 (41%), Gaps = 60/458 (13%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE F ++ G+ R +++ + + + + N P + + +L ++ L
Sbjct: 644 DEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVIL 703
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLCK 128
+ M+ GV D Y L+ GL +V + H ++ G+ + + YN+L++ K
Sbjct: 704 QMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLK 763
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ V + +MSDM + PN +++IL+ Y K +L L + G PD VT
Sbjct: 764 SRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVT 823
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------------------------------- 212
++ L G + AV+ LE+ +G
Sbjct: 824 YRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMK 883
Query: 213 -------------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
R G + + L EM + G PN Y L+++ C G +D
Sbjct: 884 WLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEID 943
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A + +MK GI V ++IRGLC G++++ + + M S G ++ + +
Sbjct: 944 RAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRS--GMVPTVATFTT 1001
Query: 314 VLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+++ L +E++ +AL + ME +L V ++ I G C D ++ DA + +M +G
Sbjct: 1002 LMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKG 1061
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
PN+ Y L A RV+ EL++++ G +P
Sbjct: 1062 LWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI------- 61
PD +F +I +++ ++ + + +M+PS K F+++++ L+++
Sbjct: 854 PDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKV 913
Query: 62 ---------------------------DLARAF-YRKKMMASGVQGDDYTYAILMKGLCL 93
++ RAF +++M A G+ + + +++GLC
Sbjct: 914 LHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR 973
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
++ + + M G+ P + TL+HSLCK K+ A L ME + V+
Sbjct: 974 CGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVS 1033
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+++LI CK++++ +AL L + S G P++ T + + S GRV + E+LE+
Sbjct: 1034 YNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIE 1093
Query: 210 EQGRLGKVKGGCRFLKEME 228
E+G + K + ME
Sbjct: 1094 ERGLIPAYKQPENLERRME 1112
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 133/320 (41%), Gaps = 27/320 (8%)
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N V ++ L++ ++ D + M+D G K N++L L E +
Sbjct: 155 NHVVFELLVKAYVKERKVLDAAVAVLFMDDC--GFKASPVSCNTILNALVEEGESKHVWL 212
Query: 330 YLKQ-MEKLFPRAVDRSLKILG-FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+L++ + + FP V +L C +G A+ +M + + N V Y+ ++H Y
Sbjct: 213 FLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM-KSCHISNSVTYNTILHWYV 271
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
++ R + A ++++M T+N ++ LCR A L++ R P
Sbjct: 272 KKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLK---RMRKDDLTP 328
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
Y+ LI +G A + M+ + ++P T+ +++ C +++ L +L
Sbjct: 329 DECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSIL 388
Query: 506 LNEMVSFVMVVHELSAK---EKRCKLRSLNHLAHGAGSVWL-------GLRIHDTTHTFI 555
++ VM EL+ CK+ L +++L G+ I+ T T +
Sbjct: 389 SEMQITGVMP-SELTYSALLNGYCKVSML------GPAIYLMEDLKSRGITINKTMRTIL 441
Query: 556 IDRRVEIGHVFCSSSSLKDV 575
ID ++G + + LK +
Sbjct: 442 IDGFCQVGEISKAKQILKSM 461
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 234/510 (45%), Gaps = 73/510 (14%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ T++ L + M + V+ + R + P+L I+NS+++ L K+ ++ A + K+
Sbjct: 196 YTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESII-NKV 254
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
SG++ D +TY ++ G C + F++ + M G +PN+ Y+TLI+ LC +G+V
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 133 GRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
A +S+M G +P V T T + L
Sbjct: 315 NEALDFISEMTR-------------------------------HGVLPTVHTFTAPIVAL 343
Query: 193 CSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRFLKEMERKGCLPNVD 237
C +GR+ DA +I + ++G R+ ++ G M R G +PN
Sbjct: 344 CDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIG--LFHRMSRDGVVPNTV 401
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN L++ E +DSAL VFN M G N +Y+ LIRG C+ G + + +L M
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461
Query: 298 EDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
KGR +P YN ++ G D A+ L+ M+ P + I GF
Sbjct: 462 ------LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGF 515
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +E A F++M++ G PN V Y LI YC++E++ A+ +++ M G P
Sbjct: 516 CKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNV 575
Query: 412 STFNTVLSGLCRQGNVGTALKL----VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+N ++ GL +Q N A +L +EE + P YS +I LC G
Sbjct: 576 QTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS-------PDVVTYSTVINGLCNNGAIPL 628
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A + +MV G LP+ T++SL+ L Q+
Sbjct: 629 ALEMFNKMVKHGCLPNLHTYSSLIQALGQE 658
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 231/511 (45%), Gaps = 36/511 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P+ I+ +VI L + + D + V + M P + S IL D+D A
Sbjct: 226 PNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEI 285
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G + + TY+ L+ GLC + RV + + M GV P + I +LC
Sbjct: 286 F-NRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALC 344
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A + DM++ PN T++ LI + A+ L + G VP+ V
Sbjct: 345 DMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTV 401
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ +L M+ +EI M + GCLPN +YN LI
Sbjct: 402 TYNALMNVL------MENMEI-------------DSALIVFNMMGKHGCLPNTSSYNELI 442
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G + A+ + +M + VTY+ +I+G C G D +++L+LM+ + G
Sbjct: 443 RGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN--G 500
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y ++ G + ++ + A +M L P V + I G+C D ++ A
Sbjct: 501 CQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAA 560
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R ++M G PNV Y+ LIH ++ A EL K M P T++TV++GL
Sbjct: 561 RMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGL 620
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C G + AL++ + + G LP YS LI+AL ++G + A + ++ +G++
Sbjct: 621 CNNGAIPLALEMFN---KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLI 677
Query: 482 PDYLTWNSLL-ICLSQQTTWLLLLLLNEMVS 511
PD +T+ ++ +C+ L EM++
Sbjct: 678 PDEVTYVKMIEVCVMSGKVDRAFDFLGEMIN 708
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 213/461 (46%), Gaps = 41/461 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + + T+I GL + +N+ + ++R + P++ F + + L D+ R
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALC----DMGRIED 351
Query: 69 RKK----MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
K M G + + YTY L+ G ++ R+ G L H M GV PN+V YN L++
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISGQRVS-RMAIG--LFHRMSRDGVVPNTVTYNALMN 408
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L +N ++ A + + M + PN +++ LI YC + A+ +L P
Sbjct: 409 VLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTP 468
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+VT +++ C G A+ +LE M+ GC P+ +Y
Sbjct: 469 TLVTYNIIIKGYCDSGDTDVAIRVLEL-------------------MKANGCQPDEWSYT 509
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LIS +C+ ++ A +FN+M G+ N VTY LI G C ++D ++L+ M+ S
Sbjct: 510 ELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRS 569
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
G + + YN +++GL ++N A E K M EK+ P V S I G C +G +
Sbjct: 570 --GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A F++M++ G +PN+ Y LI A QE RV EA E+ E+ G +P T+ ++
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
G V A + E I G P Y LIK L
Sbjct: 688 EVCVMSGKVDRAFDFLGE---MINAGCQPTLQTYDVLIKGL 725
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 143/335 (42%), Gaps = 61/335 (18%)
Query: 167 LVLLEKSFSFGFVPDVVTITKV-LELL------CSVGRVMDAVEILEESGEQGRLGKVKG 219
L+ L + S + PD T KV + LL +VGR + +++ + + +
Sbjct: 124 LLFLSREHSHKYGPD--TFAKVAMRLLESRDRPAAVGRA--RIHMIKSCSNKAEMTQ--- 176
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+L ++G + TY L+ + + + +D ++ + +G+ N + Y+++I
Sbjct: 177 ALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
LC G + D S++ +++ + + Y
Sbjct: 237 ALCKDGNVRDA---------------------ESIINKVFKSGMKPDTFTYTSM------ 269
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
ILG+C + +++ A F++M EEG PN Y LI+ C RV EA + +
Sbjct: 270 --------ILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFI 321
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
EMT HG LP TF + LC G + A K+ DM+ +G P Y+ LI
Sbjct: 322 SEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF-IDMK--KKGCKPNVYTYTSLI--- 375
Query: 460 CEKGGFQSASM---LLVQMVGKGILPDYLTWNSLL 491
G + + M L +M G++P+ +T+N+L+
Sbjct: 376 ---SGQRVSRMAIGLFHRMSRDGVVPNTVTYNALM 407
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 141/337 (41%), Gaps = 15/337 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + +I GL + + + ++ ++P + ++++++ L I LA
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM+ G + +TY+ L++ L RV + ++ +K +G+ P+ V Y +I
Sbjct: 633 F-NKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCV 691
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+GKV RA + +M +P T+ +LI + E + + LV L + S D +
Sbjct: 692 MSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKLVALPNAASTSTFDDQI 750
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQ-----GRLGKVKGGCRFLKEMERKGCLPNVDT 238
V+ +L S +D E+ + + R G+ + M + PN DT
Sbjct: 751 INKDVISVLSSKLAELD-FELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDT 809
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y + S +D A+DVF M + Y LI LC R + + + M
Sbjct: 810 YKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKML 869
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+ + + ++ GL +D +E+L ME
Sbjct: 870 SRALNADEIV--WTILINGLLGAGYKDLCMEFLHIME 904
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/497 (28%), Positives = 231/497 (46%), Gaps = 65/497 (13%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
+ R N+ P + +N+I++ L KE +M S + + +TY ILM GLC R
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
V + +LL MK +G++ + V+Y+TLI C G + R ++L +M E PN V +S
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI +CK+ A +L G PDV T T ++ LC GR A+++ +
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDL----- 175
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
M KG P+ TYN+LI+ C+ G + A +F M G V
Sbjct: 176 --------------MTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV 221
Query: 273 TYDTLIRGLCSGGRIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL--- 328
+Y+TLI GLC+ G++D+ +K+ L+ED I+ +N+V+ GL +E + D+A+
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVIT-FNTVIQGLCKEGRLDKAVEIY 280
Query: 329 --------------------EYLKQ------ME--------KLFPRAVDRSLKILGFCVD 354
EY+K ME L P + S+ I GFC
Sbjct: 281 DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ AK F +M G P + Y+ L+ + C+E + +A L +EM P +F
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G + G++ +A +L+ DM+ +G P + YS I L + G + A
Sbjct: 401 NIMIDGTLKAGDIHSAKELL-NDMQQMGL--TPDAYTYSSFINRLSKLGQMEEAKGAFDS 457
Query: 475 MVGKGILPDYLTWNSLL 491
M+ GI PD ++SL+
Sbjct: 458 MIASGITPDNHVYDSLI 474
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 200/440 (45%), Gaps = 26/440 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D ++ T+I G ++ D + ++P++ +++ +++ K+ +
Sbjct: 79 DVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVL 138
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G+Q D YTY ++ GLC R L +M +G +P++V YN LI+ LCK
Sbjct: 139 HTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKE 198
Query: 130 GKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNALVLLEKSFSFG--FVPDVV 183
G +G A + M E V+++ LI C L A+ L G PDV+
Sbjct: 199 GCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVI 258
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGK-----------VKGGC-----RFLKEM 227
T V++ LC GR+ AVEI + E+G G +K G K +
Sbjct: 259 TFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV 318
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G +P+ TY+++I +C+ +L+ A +F+ MKI G+S Y+TL+ LC +
Sbjct: 319 HKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSL 378
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ ++ Q M++S + +N ++ G + A E L M++ L P A S
Sbjct: 379 EQARRLFQEMKESN--CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYS 436
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G +E+AK FD MI G P+ +YD LI + + + E L+++M
Sbjct: 437 SFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADM 496
Query: 406 GYLPIASTFNTVLSGLCRQG 425
G + N++L+ LC
Sbjct: 497 GVILDLEITNSILTFLCNSA 516
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 126/235 (53%), Gaps = 7/235 (2%)
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
MK I + V+Y+T+I GLC R++ + +L ME S + Y ++ GL +E
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSS--CEPNSFTYCILMDGLCKE 58
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ +EA+ L +M++ L V S I GFC G ++ K FD+M+E+G PNVV+Y
Sbjct: 59 GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
CLI+ +C++ REA+ ++ MT G P T+ ++ GLC+ G AL L +
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+G P + Y+ LI LC++G A + M+ KG + +++N+L++ L
Sbjct: 179 ---KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL 230
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/480 (28%), Positives = 222/480 (46%), Gaps = 42/480 (8%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+N +LD+LVK K ++ SG + T+ IL++G C + + L +
Sbjct: 30 YNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALD 89
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLV 164
V P+ I+N LIH L K+G +A L +ME P+ T++ +I CK NL
Sbjct: 90 EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149
Query: 165 NALVLLEKSFSFG--FVPDVVTITKVLEL-LCSVGRVMDAVEILEESGEQGR-------- 213
A LLE+ G PD+VT ++ +C G V +A+EIL+ G
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYN 209
Query: 214 --------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
G+V LK M C P++ T+N L+ +C+ G+L AL+V +M +
Sbjct: 210 SIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
I + +TY L+ GLC G++ +L+ E ++G + Y S++ GL + + +
Sbjct: 267 NILPDVITYTILVNGLCRVGQVQVAFYLLE--EIVRQGYIPDVIAYTSLVDGLCKSGEIE 324
Query: 326 EALEYLKQME-----------KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
EA + +K+M + P ++ + G DG++ A ++ G VP
Sbjct: 325 EAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVP 384
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+VV Y+ LI C+ RVREA +L EM G P T +V+ GLCR G V A LV
Sbjct: 385 DVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLV 444
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
E R + P Y+ LI LC+ A ++L M G+G+ D + L++ +
Sbjct: 445 VEMSR---KRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSM 501
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 46/494 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F +IRG +A ++ + F++ P + IFN ++ L K+ + D A
Sbjct: 60 PNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKL 119
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK--PNSVIYNTLIHS 125
+ + M +S V D +TY ++ GLC + + +LL M RG K P+ V YNTLI++
Sbjct: 120 F-ENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINA 178
Query: 126 -LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+CK+G V A ++ M+ P+ +T++ +I A C +V A +L+ + P
Sbjct: 179 GICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILK---TMSCSP 235
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
D+VT +L+ C G + A+E+LEE + R+G+V+ L
Sbjct: 236 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 295
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI-----DGISWNFV----TYD 275
+E+ R+G +P+V Y L+ C++G ++ A + +M + +S N V TY+
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYN 355
Query: 276 TLIRGLCSGGRIDDGLKILQLMED-SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
++ GL G I K + L+ D G + YN+++ GL + N+ EA + +M
Sbjct: 356 IVLGGLIKDGSIS---KAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 412
Query: 335 EKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
L FP V + G C G V+DA +M + PNVV+Y LI C+ +R+
Sbjct: 413 ASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A ++ M G G + ++ + G V A+ + +E + RG LP
Sbjct: 473 DDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDE---MVARGFLPDGSTS 529
Query: 453 SPLIKALCEKGGFQ 466
L +A F+
Sbjct: 530 KTLEEAAMSNSVFE 543
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 57/345 (16%)
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E+ G +V +YN L+ ++G V+ D+ G S N VT+ LIRG C G+
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRS 345
L+ L+ +++ I +N +++GL+++ D+A++ + ME ++ P +
Sbjct: 79 TRALEFLRALDEFSVAPDVYI--FNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYN 136
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGG--------------------------------- 372
I G C GN+E A+ ++MI GG
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGM 196
Query: 373 -----VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
P+V+ Y+ +IHA C RV EA+E++K M+ P TFNT+L G C+ G +
Sbjct: 197 KLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGML 253
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
AL+++EE R LP Y+ L+ LC G Q A LL ++V +G +PD + +
Sbjct: 254 PRALEVLEEMCR---ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 310
Query: 488 NSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLN 532
SL+ L + E+ +V E+SA+E ++ S+N
Sbjct: 311 TSLVDGLCKS---------GEIEEAHKLVKEMSAREILAEMVSIN 346
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 236/506 (46%), Gaps = 32/506 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + VI G ++ KA L ++P + +N+I+D L K +++D A
Sbjct: 191 PDVVSYNIVINGFFNEGQVD---KAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDV 247
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M+ GV+ ++ TY ++ GLC V + M +GVKP++V YNT+I LC
Sbjct: 248 F-QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLC 306
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V RA + M +P+ VT++ +I CK + + A + ++ G PD +
Sbjct: 307 KAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNL 366
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ LC V A + ++ ++G G+ + + +KEM
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
P+V TY +L+ C+ G + A +F+ M GI + Y ++ G G +
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ +L LM + RI +N+V+ + DE + +M++ L P V
Sbjct: 487 SEMHDLLNLMVANGISPNHRI--FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYG 544
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I C G V+DA F+QMI EG PN V+++ L++ C ++ + EL EM
Sbjct: 545 TLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ 604
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P FNTVL LC++G V A +L++ + G P Y+ LI C
Sbjct: 605 GIRPDIVFFNTVLCNLCKEGRVMEARRLIDS---MVCMGLKPDVISYNTLIDGHCFASRM 661
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A LL MV G+ P+ +++N+LL
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLL 687
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 146/579 (25%), Positives = 247/579 (42%), Gaps = 105/579 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + T+I GL +A+ ++ + + P+ +N+I+D L K +++D+A
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGV 282
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +KM+ GV+ + TY ++ GLC V + M RGVKP+ V YNT+I LC
Sbjct: 283 F-QKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC 341
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG------ 177
K + +A + M +P+++T++I+I CK +++ A + ++ G
Sbjct: 342 KAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNG 401
Query: 178 -----------------------------FVPDVVTITKVLELLCSVGRVMDAVEILEE- 207
PDV T +L+ LC G+ +A + +
Sbjct: 402 TYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461
Query: 208 ------------------SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G++G L ++ L M G PN +N +I +Y +
Sbjct: 462 IRKGIKPSVTIYGIMLHGYGKKGALSEMHD---LLNLMVANGISPNHRIFNTVICAYAKR 518
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
++D + +F MK G+S N VTY TLI LC GR+DD +LQ + EG
Sbjct: 519 AMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA--VLQFNQMINEGVTPNNV 576
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR----- 362
+NS++YGL ++ ++ E +M + + P V + + C +G V +A+R
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM 636
Query: 363 -------------------CF-----------DQMIEEGGVPNVVIYDCLIHAYCQEERV 392
CF D M+ G PN+V Y+ L+H YC+ R+
Sbjct: 637 VCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRI 696
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
A L +EM G P T+NT+L+GL R G A +L + I L Y
Sbjct: 697 DNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELY---VNMIKSRKLWSICTY 753
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
S ++ C+ F A + + + D +T+N ++
Sbjct: 754 SIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMI 792
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 237/538 (44%), Gaps = 60/538 (11%)
Query: 54 DVLVKEDIDLARAFYRKKMMASGVQGDD-------YTYAILMKGLCLTNRVGDGFKLLHV 106
+ L+K D RA ++++ V G D +Y I++ G +V + L
Sbjct: 159 NTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLE 218
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEEN 162
M GV P+ V YNT+I LCK +V RA + M E PN+VT++ +I CK +
Sbjct: 219 M---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQE 275
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A + +K G P VT +++ LC V A + ++
Sbjct: 276 VDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ--------------- 320
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
M +G P+ TYN +I C+ +D A VF M G+ + +TY +I GLC
Sbjct: 321 ----MIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLC 376
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
+D + Q M D +G K YN +++G Q +E ++ +K+M L P
Sbjct: 377 KAQSVDRAEGVFQQMID--KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPD 434
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
L + C +G +A+ FD MI +G P+V IY ++H Y ++ + E +L+
Sbjct: 435 VFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLN 494
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
M +G P FNTV+ ++ + + + ++ +G P Y LI ALC
Sbjct: 495 LMVANGISPNHRIFNTVICAYAKRAMIDEVMHIF---IKMKQQGLSPNVVTYGTLIDALC 551
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-----LLLLLLNE-----MV 510
+ G A + QM+ +G+ P+ + +NSL+ L W L L +LN+ +V
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIV 611
Query: 511 SFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHVFCS 568
F V+ L + + + R L V +GL+ ++ +ID GH F S
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLID-----SMVCMGLKPDVISYNTLID-----GHCFAS 659
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 225/534 (42%), Gaps = 82/534 (15%)
Query: 20 GLGRARM----INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID----LARAFYRKK 71
+GRAR ++D +K D + S++ N +L V+ + LA + + +
Sbjct: 13 AIGRARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRM 72
Query: 72 MM--ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ ++ V D TY+I++ C R+ GF ++ G + + ++ N L+ LC
Sbjct: 73 LRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDT 132
Query: 130 GKVGRA-RSLMSDMEE------------------------------------------PN 146
+VG A L+ M E P+
Sbjct: 133 KRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPD 192
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
V+++I+I + E + A L G PDVVT +++ LC V A ++ +
Sbjct: 193 VVSYNIVINGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQ 249
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+M KG PN TYN +I C+ +D A VF M G
Sbjct: 250 -------------------QMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + VTY+T+I GLC +D + Q M D G K YN+++ GL + D+
Sbjct: 291 VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMID--RGVKPDHVTYNTIIDGLCKAQAIDK 348
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A +QM + + P + ++ I G C +V+ A+ F QMI++G PN Y+CLIH
Sbjct: 349 AEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIH 408
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
Y + E + +KEM+ H P T+ +L LC+ G A L + +R +G
Sbjct: 409 GYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIR---KG 465
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
P Y ++ +KG LL MV GI P++ +N+++ +++
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRA 519
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 199/433 (45%), Gaps = 37/433 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P +I+ ++ G G+ ++++ +L+ ++P+ +IFN+++ K +
Sbjct: 468 PSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHI 527
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+ + TY L+ LC RV D + M + GV PN+V++N+L++ LC
Sbjct: 528 FIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCT 587
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K + L +M P+ V F+ ++C CKE ++ A L++ G PDV++
Sbjct: 588 VDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVIS 647
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C R+ +AV++L+ G V G + PN+ +YN L+
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLD--------GMVSAGLK-----------PNIVSYNTLLH 688
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ G +D+A +F +M G++ TY+T++ GL GR + ++ M S++
Sbjct: 689 GYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRK-- 746
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV-------DGNV 357
I Y+ +L G + N DEA + + + ++D L I+ F + G
Sbjct: 747 LWSICTYSIILDGFCKNNCFDEAFKIFQSL-----CSMDLQLDIITFNIMIDGLFKGGRK 801
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
EDA F + G VP+VV Y + +E + E L M G P + N +
Sbjct: 802 EDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNAL 861
Query: 418 LSGLCRQGNVGTA 430
+ L +G + A
Sbjct: 862 IRKLLDRGEIPRA 874
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 164/383 (42%), Gaps = 57/383 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ IF TVI + MI++V+ + + ++P++ + +++D L K
Sbjct: 503 PNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQ 562
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ GV ++ + L+ GLC ++ +L M ++G++P+ V +NT++ +LCK
Sbjct: 563 FNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCK 622
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V AR L+ M +P+ ++++ LI +C + A+ LL+ S G P++V+
Sbjct: 623 EGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVS 682
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG------------- 231
+L C GR+ +A + E +G V+ L + R G
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742
Query: 232 ------------------CLPN--------------------VDTYNILISSYCETGVLD 253
C N + T+NI+I + G +
Sbjct: 743 KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A+D+F + +G+ + VTY + L G +++ + +ME K G+ N+
Sbjct: 803 DAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVME--KSGTAPNSHMLNA 860
Query: 314 VLYGLYRENQQDEALEYLKQMEK 336
++ L + A YL ++++
Sbjct: 861 LIRKLLDRGEIPRAGAYLSKLDE 883
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK----ED-IDLARAFY 68
+ ++ G + ++ K + ++ + FN ++D L K ED +DL A
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAA-- 810
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ A+G+ TY ++ + L + + L VM+ G PNS + N LI L
Sbjct: 811 ---IPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLD 867
Query: 129 NGKVGRARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEKSFSF 176
G++ RA + +S ++E N T S+LI + +EE +A L EK F
Sbjct: 868 RGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCRFF 919
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 213/456 (46%), Gaps = 30/456 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
TP + +NS++D K + ++M + D TY L+ C R+ F
Sbjct: 286 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 345
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+ LH MK+ G+KPN V Y+T I + CK G + A DM PN+ T++ LI A
Sbjct: 346 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 405
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK NL AL L+E+ G +VVT T +L+ LC GR+ +A E+
Sbjct: 406 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF------------ 453
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M G PN +TY L+ + + ++ A D+ +MK I + + Y T+
Sbjct: 454 -------RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 506
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ GLC+ R+++ ++ +++S + I Y +++ ++ Q EAL L++M L
Sbjct: 507 LWGLCNESRLEEAKLLIGEIKESGINTNAVI--YTTLMDAYFKSGQATEALTLLEEMLDL 564
Query: 338 --FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
V I G C G V++A F +M E G PNV +Y L+ C+ A
Sbjct: 565 GLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVA 624
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+L EM G +P + ++ G + GN+ AL L + R I G Y+ L
Sbjct: 625 KKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD---RMIEIGMELDLHAYTAL 681
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I L G Q A LL +M+GKG+LPD + + L+
Sbjct: 682 IWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 232/494 (46%), Gaps = 40/494 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
P +F + L M+ + + + +F + P + N++L L K DL+R F
Sbjct: 183 PGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF 242
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K M A+G++ +TY I++ LC + L MK G P+ V YN+LI
Sbjct: 243 F-KDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHG 301
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + + M+ +P+ +T++ LI +CK E + A L + + G P+VV
Sbjct: 302 KLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVV 361
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C G + +A+ +F +M R PN TY LI
Sbjct: 362 TYSTFIDAFCKEGMLQEAI-------------------KFFVDMRRVALTPNEFTYTSLI 402
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G L AL + ++ GI N VTY L+ GLC GR+ + ++ + M ++ G
Sbjct: 403 DANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA--G 460
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
Y ++++G + + + A + LK+M++ + P + + G C + +E+AK
Sbjct: 461 VAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAK 520
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++ E G N VIY L+ AY + + EA L++EM G + T+ ++ GL
Sbjct: 521 LLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGL 580
Query: 422 CRQGNVGTALKLVEEDMRGIGR----GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
C+ G LV+E M GR G P Y+ L+ LC+ F+ A L +M+
Sbjct: 581 CKSG-------LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD 633
Query: 478 KGILPDYLTWNSLL 491
KG++PD + + +L+
Sbjct: 634 KGMMPDKIAYTALI 647
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 181/410 (44%), Gaps = 35/410 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + T I + M+ + +K + R +TP+ + S++D K +LA A
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAG-NLAEALK 416
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++ +G++ + TY L+ GLC R+ + ++ M + GV PN Y L+H
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A+ ++ +M+E P+ + + ++ C E L A +L+ + G + V
Sbjct: 477 KAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAV 536
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G+ +A+ +LEE M G + TY LI
Sbjct: 537 IYTTLMDAYFKSGQATEALTLLEE-------------------MLDLGLIATEVTYCALI 577
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C++G++ A+ F M G+ N Y L+ GLC + K+ M D +G
Sbjct: 578 DGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD--KG 635
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK-----ILGFCVDGNVE 358
Y +++ G + EAL +M ++ ++ L I G G V+
Sbjct: 636 MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEI---GMELDLHAYTALIWGLSHSGQVQ 692
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
A+ D+MI +G +P+ V+Y CLI Y +V EA EL EM G +
Sbjct: 693 KARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 126/300 (42%), Gaps = 42/300 (14%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALD------------------------------- 257
R C+P ++ L S+ E G+L+ A +
Sbjct: 178 RNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGD 237
Query: 258 ----VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
F DM GI + TY+ +I LC G ++ + M+++ G I YNS
Sbjct: 238 LSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEA--GFTPDIVTYNS 295
Query: 314 VLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + DE + +QM+ P + + I FC + A +M G
Sbjct: 296 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 355
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PNVV Y I A+C+E ++EA + +M P T+ +++ C+ GN+ AL
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 415
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
KLVEE ++ G Y+ L+ LCE+G + A + M+ G+ P+ T+ +L+
Sbjct: 416 KLVEEILQA---GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ +++ ++ GL + K D + M P + +++D +K +L A
Sbjct: 603 PNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHG-NLQEALN 661
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R +M+ G++ D + Y L+ GL + +V LL M +GV P+ V+Y LI
Sbjct: 662 LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYY 721
Query: 128 KNGKVGRARSLMSDMEEPNDVT 149
GKV A L ++M + +T
Sbjct: 722 ALGKVDEALELQNEMAKRGMIT 743
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/497 (25%), Positives = 248/497 (49%), Gaps = 40/497 (8%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD 81
RA M++D + + N+ S+ +NS+L L DI ++ ASGV ++
Sbjct: 179 SRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNE 235
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
YT IL+ GLC +R+ D L P+ V +N L+ CK G V A+S
Sbjct: 236 YTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCM 295
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M + P+ +++IL+ C ++ AL + G PD+VT + +G
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGL 355
Query: 198 VMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ A ++++ G ++G ++ + ++M +G ++ TY +
Sbjct: 356 ISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTV 415
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+SS C++G +D A+ + ++M++ G+ + +TY LI GLC G +++ +++ +
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYE------ 469
Query: 302 EGSKGRISPYN----SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
E RI P + +++ GL+ + EA Y + K + + ++ I G+ G
Sbjct: 470 EMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLG 529
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+ +A R + Q+IE+G P +V ++ LI+ +C++ ++ EA +L+ + HG +P + T+
Sbjct: 530 NIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYT 589
Query: 416 TVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T+++G C +G++ + ++ E + + I P Y+ ++K LC++G + LL
Sbjct: 590 TLMNGYCEEGDMHSMFDMLHEMEAKAIK----PTQITYTVVVKGLCKEGRLHESVQLLKY 645
Query: 475 MVGKGILPDYLTWNSLL 491
M +G+ PD +T+N+++
Sbjct: 646 MYARGLFPDQITYNTVI 662
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 232/493 (47%), Gaps = 36/493 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
P +E +I GL R + D V PS+ FN+++ K +D+A++
Sbjct: 232 PQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKS 291
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+ M+ G+ D Y+Y IL+ GLC+ + + + + M++ GV+P+ V YN L +
Sbjct: 292 FF-CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G + A ++ M P+ VT++ILIC +C+ N+ + L EK S G +
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSI 410
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T +L LC GR+ D IL L EME G P++ TY++L
Sbjct: 411 VTYTVLLSSLCKSGRI-DEAVIL------------------LHEMEVIGLKPDLLTYSVL 451
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-- 300
I C+ G ++ A++++ +M I N +I GL G I + Q+ DS
Sbjct: 452 IHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEA----QMYFDSVT 507
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVE 358
K I YN ++ G + EA+ KQ+ EK + P V + I GFC G +
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A + D + G VP V Y L++ YC+E + +++ EM P T+ V+
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GLC++G + +++L++ RG P Y+ +I++ C+ Q A L QM+
Sbjct: 628 KGLCKEGRLHESVQLLK---YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQH 684
Query: 479 GILPDYLTWNSLL 491
+ P +T+N L+
Sbjct: 685 SLQPSPVTYNVLI 697
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 231/499 (46%), Gaps = 31/499 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++ GL A + + ++ T+ + + P + +N + + + L +
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF--RILGLISGAW 360
Query: 69 R--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ ++M+ +G+ D TY IL+ G C + + FKL M S+G+K + V Y L+ SL
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+G++ A L+ +ME +P+ +T+S+LI CK + A+ L E+ S P+
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNS 480
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKE 226
+ ++ L G + +A + + +LG + R K+
Sbjct: 481 FVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 540
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ KG P + T+N LI +C+ G L A+ + + +K+ G+ VTY TL+ G C G
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGD 600
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ +L ME +K +I+ Y V+ GL +E + E+++ LK M LFP +
Sbjct: 601 MHSMFDMLHEME-AKAIKPTQIT-YTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITY 658
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I FC +++ A + +QM++ P+ V Y+ LI+ C +++A L+ +
Sbjct: 659 NTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQD 718
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+ T++ C +G+V AL + + RG YS +I LC++
Sbjct: 719 QSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQ---MVERGFEVSIRDYSAVINRLCKRNL 775
Query: 465 FQSASMLLVQMVGKGILPD 483
A M+ GI PD
Sbjct: 776 ITDAKFFFCMMLTHGIPPD 794
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 197/436 (45%), Gaps = 27/436 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++KM++ G++ TY +L+ LC + R+ + LLH M+ G+KP+ + Y+ LIH LCK
Sbjct: 398 KEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCK 457
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V A L +M PN S +I ++ + A + + +++
Sbjct: 458 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIIL 517
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ +G + +AV ++ E+G + GK+ + L ++
Sbjct: 518 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 577
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +P TY L++ YCE G + S D+ ++M+ I +TY +++GLC GR+
Sbjct: 578 VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLH 637
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ +++L+ M G YN+V+ + + +A + QM L P V ++
Sbjct: 638 ESVQLLKYM--YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 695
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G CV GN++DA R + ++ V Y +I A+C + V+ A +M G
Sbjct: 696 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 755
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ ++ V++ LC++ N+ T K M + G P ++ A G
Sbjct: 756 FEVSIRDYSAVINRLCKR-NLITDAKFFFCMM--LTHGIPPDQDICLVMLNAFHRSGDPN 812
Query: 467 SASMLLVQMVGKGILP 482
S + M+ G+LP
Sbjct: 813 SVFEIFAMMIKCGLLP 828
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 182/408 (44%), Gaps = 27/408 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL + + + ++ + + + P+ + ++I+ L ++ Y
Sbjct: 443 PDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMY 502
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ S V + Y I++ G +G+ + + +G+ P V +N+LI+ CK
Sbjct: 503 FDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCK 562
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A L+ ++ P VT++ L+ YC+E ++ + +L + + P +T
Sbjct: 563 KGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQIT 622
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T V++ LC GR+ ++V++ LK M +G P+ TYN +I
Sbjct: 623 YTVVVKGLCKEGRLHESVQL-------------------LKYMYARGLFPDQITYNTVIQ 663
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
S+C+ L A + N M + + VTY+ LI GLC G + D ++L ++D +
Sbjct: 664 SFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQD--QSI 721
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAV-DRSLKILGFCVDGNVEDAKR 362
+ Y +++ + AL + QM E+ F ++ D S I C + DAK
Sbjct: 722 RLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKF 781
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F M+ G P+ I +++A+ + E+ M G LP+
Sbjct: 782 FFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLPV 829
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 168/361 (46%), Gaps = 20/361 (5%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N+V + +L CAY + E + +AL +L K + T +L L + D +
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEI 226
Query: 206 EESG----EQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVL 252
+ SG E + G CR FL+E + P+V ++N L+S +C+ G +
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A F M G+ + +Y+ L+ GLC G +++ L+ ME+ G + I YN
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN--HGVEPDIVTYN 344
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+ G A + +++M L P V ++ I G C GN+E++ + ++M+ +
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G ++V Y L+ + C+ R+ EA L+ EM G P T++ ++ GLC++G V A
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEA 464
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
++L EE + P S S +I L EKG A M + + + + +N +
Sbjct: 465 IELYEE---MCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIM 521
Query: 491 L 491
+
Sbjct: 522 I 522
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 227/475 (47%), Gaps = 37/475 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+E + T+I GL A I++ + + + P+++ + I+ L D +L
Sbjct: 283 NEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLF 342
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M + + +TY +++ +C ++ + ++L+ M +G+ P+ V YN LI C+
Sbjct: 343 NEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEE 402
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G++ A ++ ME PN+ T++ LIC + K +++ A+ LL K P +VT
Sbjct: 403 GRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTY 462
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ + C G A ++L+ LKE G +P+ TY++ I +
Sbjct: 463 NSLIHVQCKAGHFDSAYKLLD----------------LLKE---NGLVPDQWTYSVFIDT 503
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C++ ++ A D+FN +K GI N V Y LI G C G+ID+ + +L+ M E
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMH--SEDCL 561
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRC 363
S YNS++YG+ +E + E L ++ M K+ P ++ I +G+ + A R
Sbjct: 562 PNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRV 621
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F+QM+ G P+V Y IH YC V+EA +M M G +P + T+ ++S R
Sbjct: 622 FNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYER 681
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
G A +++ R + G P ++ LI ++++ L++ M G+
Sbjct: 682 LGLAYDAFNVLK---RMLDAGCDPSHPIWNNLI-------WYKASPFLMLLMCGR 726
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 196/437 (44%), Gaps = 62/437 (14%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNAL 167
+ PN NT++++ K G + A +S + + P+ T++ LI YC+ ++ +A
Sbjct: 210 IVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAY 269
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG-------- 219
+ + G + V+ T ++ LC GR+ + + + ++ E V+
Sbjct: 270 KVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL 329
Query: 220 --------GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G EM + C PNV TY +++ + C+ LD + + N+M G+ +
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VTY+ LIRG C GRI+ L+IL LME + R YN ++ G + +A+ L
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERT--YNELICGFSKRKHVHKAMTLL 447
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP--------------- 374
+M KL P V + I C G+ + A + D + E G VP
Sbjct: 448 SKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKS 507
Query: 375 --------------------NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
N V+Y LI +C+ ++ EA L++ M LP +ST+
Sbjct: 508 KRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTY 567
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+++ G+C++G V L +V E+M +G P Y+ LI+ + +G F A+ + Q
Sbjct: 568 NSLIYGVCKEGKVQEGLSMV-ENMSKMGVK--PTVATYTILIEEMLREGDFDHANRVFNQ 624
Query: 475 MVGKGILPDYLTWNSLL 491
MV G PD T+ + +
Sbjct: 625 MVSFGHKPDVYTYTAFI 641
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 31/300 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLA 64
P+E + +I G + + ++ KA L+S+ +TPSL +NS++ V K D A
Sbjct: 422 PNERTYNELICGFSKRKHVH---KAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ +G+ D +TY++ + LC + R+ + L + +K +G+K N V+Y LI
Sbjct: 479 YKLL-DLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALID 537
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK GK+ A SL+ M PN T++ LI CKE + L ++E G P
Sbjct: 538 GHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKP 597
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
V T T ++E E R G R +M G P+V TY
Sbjct: 598 TVATYTILIE-------------------EMLREGDFDHANRVFNQMVSFGHKPDVYTYT 638
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
I +YC +G + A + M G+ + +TY LI G D +L+ M D+
Sbjct: 639 AFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDA 698
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 244/537 (45%), Gaps = 64/537 (11%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-DVLVKEDIDLARAFYRKK 71
+F +I G + + ++ V R L N +L D+L ++L FY
Sbjct: 168 VFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG- 226
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ + V D YTY L+ +G +LL M+ +G P+ V YN +I LC+ G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 132 VGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V A L M++ V T+SILI + K++ A ++LE+ FS G P V T
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 188 VLELLCSVGRVMDAVEILEESGEQG-RL------GKVKGGCRF---------LKEMERKG 231
+++ G +A + EE +G +L VKG C+F L EM G
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406
Query: 232 CLPNVDTYNILISSY-----------------------------------CETGVLDSAL 256
P+ TYN +I Y C G ++ A
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
VF M G+ N V Y TLI+G GR + ++IL++M+ K+G + + YNSV+
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD--KKGVQPDVLCYNSVII 524
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL + + +EA +YL +M L P I G+C G ++ A R F +M+ G P
Sbjct: 525 GLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAP 584
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
N V+ LI YC+E EA+ + + M G P T++ ++ GL R G + A++L+
Sbjct: 585 NDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELL 644
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E + +G +P Y+ +I C++GG A L M KGI P+ +T+N+L+
Sbjct: 645 SEFLE---KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALI 698
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 223/505 (44%), Gaps = 63/505 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARA 66
PD + +I G + + + V + + N+ P+ I++ L + D +R
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + M++ GV+ + Y L+KG R + ++L VM +GV+P+ + YN++I L
Sbjct: 469 F--EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ K+ A+ + +M E PN T+ LI YCK + A ++ G P+
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586
Query: 183 VTITKVLELLCSVGRVMDAVEILE--------------ESGEQG--RLGKVKGGCRFLKE 226
V T +++ C G +A I + G R GK++G L E
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
KG +P+V TYN +IS +C+ G + A + M GIS N +TY+ LI GLC G
Sbjct: 647 FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
I+ ++ +G G+ +N+V Y
Sbjct: 707 IERARELF-------DGIPGKGLAHNAVTYATI--------------------------- 732
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+C GN+ A R FD+M +G P+ +Y LI +E +A L E G
Sbjct: 733 -IDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG 791
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ S+ N ++ G C+ G V A +L+ EDM + + P Y+ LI C+ G +
Sbjct: 792 FAS-TSSLNALMDGFCKSGKVIEANQLL-EDM--VDKHVKPDHVTYTILIDYHCKTGFLK 847
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A V M + ++P+ LT+ +LL
Sbjct: 848 EAEQFFVDMQKRNLMPNALTYTALL 872
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 231/527 (43%), Gaps = 58/527 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + VI GL RA +++ + L+ + + + ++ ++D K+
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M + G++ Y L+ G G+ F++ M +RGVK N YN L+ +CK
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A +L+++M +P+ T++ +I Y KE+N LL + VP T
Sbjct: 389 FGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYT 448
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G + DA + E G + G+ + R LK M+
Sbjct: 449 CGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+KG P+V YN +I C++ ++ A D +M G+ N TY LI G C G +
Sbjct: 509 KKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQ 568
Query: 289 DGLKILQLMED-----------------SKEGSK-----------GR-----ISPYNSVL 315
+ + M KEGS GR + Y++++
Sbjct: 569 VADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALI 628
Query: 316 YGLYRENQQDEALEYLKQ-MEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+GL R + A+E L + +EK L P + I GFC G + A + + M ++G
Sbjct: 629 HGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGIS 688
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN++ Y+ LI+ C+ + A EL + G G A T+ T++ G C+ GN+ A +L
Sbjct: 689 PNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRL 748
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+E +G P S YS LI ++G + A L ++ V KG
Sbjct: 749 FDEMTL---KGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF 792
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/481 (25%), Positives = 215/481 (44%), Gaps = 29/481 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ P+ I+ T+I+G + + V+ ++ + + P + +NS++ L K
Sbjct: 474 SLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKME 533
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
Y +M+ G++ + YTY L+ G C + + + M G+ PN V+ LI
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALI 593
Query: 124 HSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
CK G A S+ M P+ T+S LI + L A+ LL + G V
Sbjct: 594 DGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLV 653
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PDV T ++ C G + A ++ E M +KG PN+ TY
Sbjct: 654 PDVFTYNSIISGFCKQGGIGKAFQLHE-------------------YMCQKGISPNIITY 694
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI+ C+ G ++ A ++F+ + G++ N VTY T+I G C G + ++ M
Sbjct: 695 NALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEM-- 752
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
+ +G Y++++ G +E ++AL +L+ ++K F + + GFC G V
Sbjct: 753 TLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVI 812
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A + + M+++ P+ V Y LI +C+ ++EA + +M +P A T+ +L
Sbjct: 813 EANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALL 872
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
SG G L +E I + P +S +I A ++G L+ M+ K
Sbjct: 873 SGYNMAGRRSEMFALFDE---MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKK 929
Query: 479 G 479
G
Sbjct: 930 G 930
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 237/573 (41%), Gaps = 95/573 (16%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
+I GL R I D + +++ + P+ I+ +++ V+E K M G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
VQ D Y ++ GLC + ++ + L M RG+KPN Y LIH CK+G++ A
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
+M PNDV + LI YCKE + A + PDV T + ++ L
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
G++ A+E+L E E+G + G + + + M +KG PN+
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN LI+ C+ G ++ A ++F+ + G++ N VTY T+I G C G + ++
Sbjct: 692 ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751
Query: 297 ME------DS-----------KEGSKGR---------------ISPYNSVLYGLYRENQQ 324
M DS KEG+ + S N+++ G + +
Sbjct: 752 MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKV 811
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
EA + L+ M + + P V ++ I C G +++A++ F M + +PN + Y L
Sbjct: 812 IEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTAL 871
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG---------------------- 420
+ Y R E L EM P T++ ++
Sbjct: 872 LSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGG 931
Query: 421 -------------LCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
LCR+ +V LK++E+ + +G+ SL S L++ + G
Sbjct: 932 NVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNL-SLATC---STLVRCFHKAGKMD 987
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
A+ +L MV +PD N LI + Q +T
Sbjct: 988 GAARVLKSMVRFKWVPDSTELND-LINVEQDST 1019
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 221/464 (47%), Gaps = 34/464 (7%)
Query: 47 KIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
+++N ++D L++E++ A M GV + +TY +L++ LC NRVG K+L
Sbjct: 129 RLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDE 188
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNA 166
M +G P+ V Y T++ LCK ++ A +++ M P +++ ++ A C+E +
Sbjct: 189 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-PPVAASYNAIVLALCREFRMQEV 247
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
++ G P+V+T T +++ C + G+++ C L
Sbjct: 248 FSVVSDMVGRGLQPNVITYTTIVDAFC-------------------KAGELRMACAILAR 288
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M GC PNV T+ L+ + G + ALD++ M +G + + V+Y+ LIRGLCS G
Sbjct: 289 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 348
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+ IL ME + G + Y++++ G + A+ M + P V
Sbjct: 349 LKGASSILNSME--QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 406
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ + FC AK D+M+ E PN V ++ LI + C RV A + EM
Sbjct: 407 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 466
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKG 463
HG +P T+N ++ GL R+GN G AL +V E GI + Y+ ++ LC+
Sbjct: 467 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVT----YNTVVSGLCQTR 522
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-----TTWLL 502
+ A + + +M+ +GI P+ T+++++ ++ W+L
Sbjct: 523 MSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWML 566
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 23/277 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G +A + + + +SR P++ ++ +++DV K+ +
Sbjct: 366 PNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSL 425
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ + T+ L++ LC RVG + H M+ G PN YN LIH L +
Sbjct: 426 IDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFR 485
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G G A ++++M+ E + VT++ ++ C+ A+V + K G P+ T
Sbjct: 486 EGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFT 545
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ C + G+V+ L M C N+ Y IL++
Sbjct: 546 FSAIIHAYC-------------------KEGEVRMAAWMLGAMNVVNCHRNILVYTILMA 586
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
C L A+ M +GI N VT++ L+RG+
Sbjct: 587 ELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ F T+IR L R + + + R P+ + +N ++ L +E + A
Sbjct: 435 PPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREG-NCGDAL 493
Query: 68 YR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +M + G++ TY ++ GLC T + + M +G++PN+ ++ +IH+
Sbjct: 494 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAY 553
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+V A ++ M N + ++IL+ C ++ LV+A+ L K G P+
Sbjct: 554 CKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNT 613
Query: 183 VT 184
VT
Sbjct: 614 VT 615
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ TV+ GL + RM + + + + P+ F++I+ KE A+ M
Sbjct: 511 YNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMN 570
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ Y ILM LC +++ D L M G+ PN+V +N L+ + +N
Sbjct: 571 VVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 626
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 141/458 (30%), Positives = 216/458 (47%), Gaps = 32/458 (6%)
Query: 41 NMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
N TP++ +N+I+D L K + +D A + M+ GV+ D TY+ ++ GLC V
Sbjct: 194 NCTPNVVTYNTIIDGLCKAQAVDRAEGVL-QHMIDKGVKLDVVTYSTIIDGLCKAQAVDR 252
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
+L M +GVKP+ V YNT+I LCK V RA ++ M + P+ VT++ +I
Sbjct: 253 AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 312
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
CK + + A +L+ PD+ T ++ S G + V
Sbjct: 313 GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVV------------- 359
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
R L+EM +G P+V TY++L+ C+ G A +F M GI N Y
Sbjct: 360 ------RRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYG 413
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
L+ G + G I D +L LM + I +N VL ++ DEA+ +M
Sbjct: 414 ILLHGYAARGAIADLTDLLDLMVANGISPNNYI--FNIVLCAYAKKAMIDEAMHIFSRMS 471
Query: 336 K--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ L P V + I C G V+DA F+QMI +G PN V+++ L++ C +R
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+A EL EM G P FNT++ LC +G V A +L++ R G P Y+
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMER---VGVRPNVISYN 588
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LI C G A+ LL MV G+ PD +++++LL
Sbjct: 589 TLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLL 626
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 231/506 (45%), Gaps = 37/506 (7%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI----DLARAFYRK--KMMASGVQGD 80
I+D +K D + S++ FN +L+V+ + +LA + + + + ++ V+ D
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS-LM 139
TY+IL C R+ GF ++ G + N V+ N L++ LC +V A L+
Sbjct: 90 LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG---FVPDVVTITKVLELL 192
M E PN V+ + L+ C E+ + AL LL G P+VVT +++ L
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 193 CSVGRVMDAVEILEESGEQG-RLGKVK------GGCR---------FLKEMERKGCLPNV 236
C V A +L+ ++G +L V G C+ L+ M KG P+V
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN +I C+ +D A V M G+ + VTY+T+I GLC +D +LQ
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M D + K I YN +++G + E + L++M L P V SL + C +
Sbjct: 330 MID--KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +A++ F MI +G PNV IY L+H Y + + ++L+ M +G P F
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N VL ++ + A+ + R G P Y LI ALC+ G A + Q
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFS---RMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQ 504
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTW 500
M+ G+ P+ + +NSL+ L W
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRW 530
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 231/532 (43%), Gaps = 78/532 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
PD + T+I GL +A+ ++ + ++ P ++ +N ++ + E ++ R
Sbjct: 302 PDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRR 361
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++M A G+ D TY++L+ LC + + K+ + M +G+KPN IY L+H
Sbjct: 362 L--EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGY 419
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G + L+ M PN+ F+I++CAY K+ + A+ + + G PDV
Sbjct: 420 AARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDV 479
Query: 183 VTITKVLELLCSVGRVMDAV-----------------------------------EILEE 207
VT +++ LC +GRV DAV E+ E
Sbjct: 480 VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+QG G+V R + MER G PNV +YN LI +C G
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D A + + M G+ + ++YDTL+RG C GRID+ + + M ++G Y
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM--LRKGVTPGAVTY 657
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIE 369
+++L GL+ + EA E M K + + I+ G C V++A + F +
Sbjct: 658 STILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCS 717
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG---- 425
+ PN++ + +I + R ++A +L + HG +P T+ ++ + ++G
Sbjct: 718 KDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDE 777
Query: 426 --NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
N+ A++ G P S + +I++L +G A L ++
Sbjct: 778 FDNLFLAME---------KSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
++ GL + +++ K + ++ P++ F ++DVL K + + G
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ + TY I+MK + + + L M+ G P+SV+ N +I SL G++ RA
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAG 814
Query: 137 SLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEK 172
+ +S ++E N T S+LI + +EE +A L EK
Sbjct: 815 AYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEK 854
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 152/538 (28%), Positives = 247/538 (45%), Gaps = 60/538 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD +F T++ ++D ++ + + + P++ +N+I+ L K L AF
Sbjct: 195 PDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNG-RLDEAFQ 253
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++KM V+ TY +L+ GL R + +L M RG PN+V+YNTLI C
Sbjct: 254 FKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYC 313
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + A + DM PN VT + LI YCK + +A LLE+ + G V +
Sbjct: 314 RIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQG 373
Query: 184 TITKVLELLCSVGRVMDAVEILEE------SGEQGRLGK-VKGGCRFLKEME-------- 228
T T V+ LC R A+ + E G L V G C+ K+ E
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433
Query: 229 -RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG N T N LI CE G + A + +M G+ + ++Y+TLI C G++
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
++G K+ + M + G + + YN +L+GL + +EA + +K FP A
Sbjct: 494 EEGFKLKEEM--VRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G+C VE+ ++ F +M+ N V+Y LI AYC+ +REA L +M
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG----------------------- 442
G ++T+++++ GL G V +A +L++E MR G
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDE-MRKEGLSPNVVCYTALIGGYCKLGQMHK 670
Query: 443 ----------RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
P Y+ +I C+ G ++A+ LL +M KGI+PD +T+N+L
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNAL 728
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 228/492 (46%), Gaps = 33/492 (6%)
Query: 30 VVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILM 88
V + L++ + PSLK N +L LVK ++ ++ + M GV D Y ++ ++
Sbjct: 146 VFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVF-DIMCHCGVTPDVYLFSTMV 204
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
C RV D +L M+ GV PN V YN +IH LCKNG++ A ME+
Sbjct: 205 NAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVK 264
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ VT+ +LI K E A +L++ G+ P+ V +++ C +G + A++I
Sbjct: 265 PSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQI 324
Query: 205 LEESGEQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCE 248
++ G ++G C+ L+EM G + N T+ +I C
Sbjct: 325 RDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI-LQLMEDSKEGSKGR 307
DSAL +M + N L+ GLC G+ + +++ +L+E +G
Sbjct: 385 KCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLE---KGFAAN 441
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
N++++GL ++EA + LK+M L ++ + IL C +G VE+ + +
Sbjct: 442 TVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKE 501
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+ G P++ Y+ L+H C ++ EA L E +G P A T+ ++ G C+
Sbjct: 502 EMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKAN 561
Query: 426 NVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
V KL +E + I + ++ Y LI+A CE G + A L M +GI
Sbjct: 562 RVEEGEKLFQEMVTMKIEQNAVV----YGTLIRAYCENGNMREAFRLRDDMRSRGIPQTS 617
Query: 485 LTWNSLLICLSQ 496
T++SL+ LS
Sbjct: 618 ATYSSLIHGLSN 629
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/546 (25%), Positives = 243/546 (44%), Gaps = 74/546 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + +I GL + +++ + + + + + PSL + +++ LVK E D A
Sbjct: 230 PNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCI 289
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M G ++ Y L+ G C + ++ M S G+ PNSV N+LI C
Sbjct: 290 L-KEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYC 348
Query: 128 KNGKVGRARSLMSDM---------------------------------------EEPNDV 148
K+ ++ A L+ +M +PND
Sbjct: 349 KSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDG 408
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++L+ C+ A+ L + GF + VT ++ LC G +A ++L+E
Sbjct: 409 LLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM 468
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G + GKV+ G + +EM R+G P++ TYN+L+ C G +
Sbjct: 469 LERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKI 528
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A ++++ K +G + TY +I G C R+++G K+ Q M K N
Sbjct: 529 EEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMK-------IEQN 581
Query: 313 SVLYGL----YREN-QQDEALEYLKQME-KLFPR-AVDRSLKILGFCVDGNVEDAKRCFD 365
+V+YG Y EN EA M + P+ + S I G G V+ A + D
Sbjct: 582 AVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLD 641
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M +EG PNVV Y LI YC+ ++ + +++EM+ + P T+ +++G C+ G
Sbjct: 642 EMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLG 701
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
N+ A KL+ E + +G +P + Y+ L C++G + A + M GI D +
Sbjct: 702 NMKAAAKLLNEMAQ---KGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDI 758
Query: 486 TWNSLL 491
T+ +L+
Sbjct: 759 TYTTLI 764
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 177/372 (47%), Gaps = 24/372 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ + +D +L+ GLC + + +L + + +G N+V N LIH LC+ G
Sbjct: 397 EMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAG 456
Query: 131 KVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A L+ +M E + ++++ LI A CKE + L E+ G PD+ T
Sbjct: 457 SKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYN 516
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+L LC++G++ +A + E + G + +V+ G + +EM
Sbjct: 517 MLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM 576
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
N Y LI +YCE G + A + +DM+ GI TY +LI GL + G +D
Sbjct: 577 KIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSA 636
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++L M KEG + Y +++ G + Q + L++M + P + ++ I
Sbjct: 637 NQLLDEMR--KEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMI 694
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C GN++ A + ++M ++G VP+ V Y+ L + +C+E ++ EA ++ M+ G
Sbjct: 695 NGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGIS 754
Query: 409 PIASTFNTVLSG 420
T+ T++ G
Sbjct: 755 LDDITYTTLIDG 766
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 150/323 (46%), Gaps = 26/323 (8%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PDV + ++ C+ GRV DA+E+ ++ME+ G PNV
Sbjct: 192 GVTPDVYLFSTMVNAFCTGGRVDDAIELF-------------------RKMEKVGVAPNV 232
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN +I C+ G LD A M+ + + + VTY LI GL R D+ IL+
Sbjct: 233 VTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKE 292
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M D + YN+++ G R AL+ M + P +V + I G+C
Sbjct: 293 MSDRGYAPNNVV--YNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKS 350
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+E A+ ++M+ GGV N + +IH C + R A + EM + P
Sbjct: 351 NQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLL 410
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
++SGLC+ G A++L R + +G + + LI LCE G + A+ LL +
Sbjct: 411 TLLVSGLCQNGKQSEAIELW---YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKE 467
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ +G++ D +++N+L++ ++
Sbjct: 468 MLERGLVLDSISYNTLILACCKE 490
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 136/292 (46%), Gaps = 22/292 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
D + T+I + + + K + + R + P + +N +L L I+ A +
Sbjct: 476 DSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +G D YTY I++ G C NRV +G KL M + ++ N+V+Y TLI + C+
Sbjct: 536 HE-CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCE 594
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + A L DM T+S LI + +A LL++ G P+VV
Sbjct: 595 NGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVC 654
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T ++ C +G++ IL+E +LG +K + L EM
Sbjct: 655 YTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMA 714
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+KG +P+ TYN L + +C+ G ++ AL V + M GIS + +TY TLI G
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 55/337 (16%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M+ G+ D +Y L+ C +V +GFKL M RG++P+ YN L+H LC
Sbjct: 466 KEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNM 525
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK+ A L + ++ P+ T+ I+I YCK + L ++ + + V
Sbjct: 526 GKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVY 585
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
++ C G + +A + ++ +G +G V + L EM +
Sbjct: 586 GTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRK 645
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+G PNV Y LI YC+ G + + +M I+ + N +TY +I G C G +
Sbjct: 646 EGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKA 705
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL 349
K+L M KG + P AV +
Sbjct: 706 AAKLLNEM-----AQKG------------------------------IVPDAVTYNALTN 730
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
GFC +G +E+A + D M G + + Y LI +
Sbjct: 731 GFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 44/284 (15%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ KG P++ T N L+SS + + + VF+ M G++ + + T++ C+GGR
Sbjct: 153 LANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGR 212
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDR 344
+DD A+E ++MEK+ P V
Sbjct: 213 VDD-------------------------------------AIELFRKMEKVGVAPNVVTY 235
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C +G +++A + ++M +E P++V Y LI+ + ER EA+ ++KEM+
Sbjct: 236 NNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSD 295
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
GY P +NT++ G CR GN+ TAL+ + +DM I G P S + LI+ C+
Sbjct: 296 RGYAPNNVVYNTLIDGYCRIGNISTALQ-IRDDM--ISNGISPNSVTCNSLIQGYCKSNQ 352
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLL 506
+ A LL +M+ G + + T+ S++ +CL + LL ++
Sbjct: 353 MEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIM 396
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/486 (27%), Positives = 234/486 (48%), Gaps = 32/486 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
IF ++R + N+ ++ L+ P+++ N +L + +K + +A Y +
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY-AE 206
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M ++ YT+ I++ LC ++ + + M++ GVKPN V YNT+IH C GK
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
RAR + M+ EP+ T++ I CKE L A L+ K G VP+ VT
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNA 326
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ C+ G + A + EM KG + ++ TYN+ I +
Sbjct: 327 LIDGYCNKGDLDKAYA-------------------YRDEMISKGIMASLVTYNLFIHALF 367
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A ++ +M+ G+ + VT++ LI G C G +L M +G +
Sbjct: 368 MEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEM--VGKGIQPT 425
Query: 308 ISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ Y S++Y L + N+ EA Q E L P + + I G C +GN++ A +
Sbjct: 426 LVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLK 485
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M +P+ + Y+ L+ YC+E +V EA +L+ EM G P ++NT++SG ++G
Sbjct: 486 EMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRG 545
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
++ A ++ +E M G P Y+ LI+ LC+ + A LL +MV KGI PD
Sbjct: 546 DMKDAFRVRDEMM---TTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDS 602
Query: 486 TWNSLL 491
T+ S++
Sbjct: 603 TYLSII 608
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 188/383 (49%), Gaps = 28/383 (7%)
Query: 113 KPN-SVIYNTLIHSLCKNGKVGRARSLMSD-MEEPNDVTFSILICAYCKEENLVNALVLL 170
KP+ ++I ++ C N + +L D ++ + F +L+ AYC+ + AL
Sbjct: 110 KPSINLIQRLILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECF 169
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK 230
GFVP++ T ++L L + R A + EM R
Sbjct: 170 YLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY-------------------AEMFRM 210
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
++ T+NI+I+ C+ G L A + M+ G+ N VTY+T+I G C G+
Sbjct: 211 NIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRA 270
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
I Q M+D +G + YNS + GL +E + +EA + +M + L P AV + I
Sbjct: 271 RVIFQTMKD--KGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G+C G+++ A D+MI +G + ++V Y+ IHA E R+ +A ++KEM G +
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P A T N +++G CR G+ A L++E +G+G P Y+ LI L ++ + A
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDE---MVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L ++ +G+LPD + +N+L+
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALI 468
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
P + ++I LG+ + + + + + P + +FN+++D +ID RAF
Sbjct: 424 PTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID--RAF 481
Query: 68 YR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+M V D+ TY LM+G C +V + +LL MK RG+KP+ + YNTLI
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGY 541
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G + A + +M +P +T++ LI CK + +A LL++ S G PD
Sbjct: 542 SKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDD 601
Query: 183 VTITKVLELLCSV 195
T ++E + +V
Sbjct: 602 STYLSIIEAMETV 614
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 221/452 (48%), Gaps = 27/452 (5%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G D +Y++++ G C ++G KL+ ++ +G+KPN YN++I LCK G
Sbjct: 277 QMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTG 336
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A ++ M+ P++V ++ LI + K N+ L ++ VPD VT T
Sbjct: 337 RVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYT 396
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC G+V++A ++ E +G + G++K +M K
Sbjct: 397 SMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK 456
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PNV TY L+ C+ G +D A ++ ++M G+ N TY+ LI GLC G I+
Sbjct: 457 GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA 516
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+K+++ M+ + G Y +++ + + +A E L+ M + L P V ++ +
Sbjct: 517 VKLMEEMDLA--GFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLM 574
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC+ G +ED +R M+++G +PN ++ L+ YC +R E+ K M G +
Sbjct: 575 NGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVV 634
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +T+N ++ G C+ N+ A L +E + +G + Y+ LIK ++ F+ A
Sbjct: 635 PDTNTYNILIKGHCKARNMKEAWFLHKE---MVEKGFSLTAASYNSLIKGFYKRKKFEEA 691
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
L +M G + + ++ + ++ W
Sbjct: 692 RKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNW 723
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 213/450 (47%), Gaps = 24/450 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++ G + + V+K + + R + P+ +NSI+ L K +
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M + D+ Y L+ G + V +KL MK + + P+ V Y ++IH LC+
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV AR L S+M +P++VT++ LI YCK + A L + G P+VVT
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T +++ LC G V A E+L E E+G ++G ++ + ++EM+
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TY ++ +YC+ G + A ++ M G+ VT++ L+ G C G ++
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
DG ++++ M D +G + +NS++ N +E K M + + P ++
Sbjct: 585 DGERLIKWMLD--KGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNI 642
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C N+++A +M+E+G Y+ LI + + ++ EA +L +EM HG
Sbjct: 643 LIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ ++ + +GN L+L +E
Sbjct: 703 FIAEKEIYDIFVDVNYEEGNWENTLELCDE 732
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 201/414 (48%), Gaps = 27/414 (6%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILIC 155
F++ GV N+V YN ++H LC+ GKV A SL+ ME P+ V++S+++
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ---- 211
YC+ E L L L+E+ G P+ T ++ LC GRV++A ++L Q
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 212 ------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
G+ G V + EM+RK +P+ TY +I C+ G + A +F
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M G+ + VTY LI G C G + + + M ++G + Y +++ GL
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQM--VEKGLTPNVVTYTALVDGLC 473
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ + D A E L +M + L P + I G C GN+E A + ++M G P+ +
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTI 533
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y ++ AYC+ + +A EL++ M G P TFN +++G C G + +L++
Sbjct: 534 TYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK-- 591
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G +P + ++ L+K C + ++ + M +G++PD T+N L+
Sbjct: 592 -WMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 19/222 (8%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
DG + A R F + E G N V Y+ ++H CQ +V+EA L+ +M G +P +
Sbjct: 231 DG-IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVS 289
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ ++ G C+ +G LKL+EE R +G P Y+ +I LC+ G A +L
Sbjct: 290 YSVIVDGYCQVEQLGKVLKLMEELQR---KGLKPNQYTYNSIISFLCKTGRVVEAEQVLR 346
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEM---------VSFVMVVHELSAKE 523
M + I PD + + +L+ + + L +EM V++ ++H L
Sbjct: 347 VMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAG 406
Query: 524 KRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
K + R L + + GL+ + T+T +ID + G +
Sbjct: 407 KVVEARKL-----FSEMLSKGLKPDEVTYTALIDGYCKAGEM 443
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 230/492 (46%), Gaps = 29/492 (5%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
Q PP F ++ + + + + ++ + + F + P + +++ L + +D A
Sbjct: 40 QPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFA 99
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ K++ G Q D T+ L++GLC+ ++G+ L M G +PN V Y TLI+
Sbjct: 100 FSAL-AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLIN 158
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK+ +V A ++ S+M PN VT++ LI CK + L+ + +P
Sbjct: 159 GLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 218
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFL 224
DV T+ V++ LC G V +A ++++ +G V G C +
Sbjct: 219 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 278
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M K C+ NV +YN LI+ YC+ +D A+ +F +M ++ N VTY+TLI GLC
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAV 342
GR+ D + + E G + Y ++ L + D+A+ LK +E P
Sbjct: 339 GRLQDAISLFH--EMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 396
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ + G C G +EDA+ F + +G PNV Y+ +IH C++ + EAS+L EM
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+G P T+N + G R ++L+EE + RG + L+ L +
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE---MLARGFSVDVSTTTLLVGMLSDD 513
Query: 463 GGFQSASMLLVQ 474
G QS +L +
Sbjct: 514 GLDQSVKQILCK 525
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 207/456 (45%), Gaps = 40/456 (8%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS FN +L + K ++M + G+ D YT AI++ LC NRV F
Sbjct: 43 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L + G +P++ + TLI LC GK+G A L M +PN VT+ LI CK
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ + A + + + G P++VT ++ LC +L + K
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLC-------------------KLCEWKH 203
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ EM +P+V T N ++ + C+ G++ A DV + M G+ N VTY+ L+
Sbjct: 204 VTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
G C +D +K+ M + + YN+++ G + D+A+ ++M ++L
Sbjct: 264 GHCLRNEVDVAVKVFDTM--VHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V + I G C G ++DA F +M+ G +P++V Y L C+ + +A
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMA 381
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI-----GRGSLPGSGHY 452
L+K + G + P + T+L G+CR G + ED R + +G P Y
Sbjct: 382 LLKAIEGSNWDPDIQIYTTILDGMCRAGEL--------EDARDLFSNLSSKGLQPNVWTY 433
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+ +I LC++G AS L +M G P+ T+N
Sbjct: 434 NIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYN 469
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 190/408 (46%), Gaps = 48/408 (11%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP F ++ + + + + V+ + + F + P + N +L+ L
Sbjct: 575 MHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN----ILINSFCHLR 630
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R Y K++ G Q D TY LM GLC M ++G+ P+ YN
Sbjct: 631 RLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYN 677
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+LIH+LC + +L+++M PN V FS ++ A CKE + A +++
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PDVVT T +++ C + +AV++ + M KGC+PNV
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDT-------------------MVHKGCVPNV 778
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
+YNILI+ YC+ +D A+ + M + G+ + VTY+TLI GLC GR+ + +
Sbjct: 779 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 838
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVD 354
M S G + Y +L L + + EA+ LK +E L + ++ I G C
Sbjct: 839 MVAS--GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 896
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
G +E A+ F + +G P+V Y+ +IH C+ + EA++L ++M
Sbjct: 897 GELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 182/403 (45%), Gaps = 30/403 (7%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TF 150
N + + + M + P++V +N L+ S+ K SL M+ P DV T
Sbjct: 24 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+I+I + C + A L K G PD T T ++ LC G++ +A+ + ++
Sbjct: 84 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK--- 140
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M +G PNV TY LI+ C+ + A ++F++M GIS N
Sbjct: 141 ----------------MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPN 184
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY++LI GLC ++ M DSK + N+V+ L +E EA +
Sbjct: 185 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK--IMPDVFTLNTVVDALCKEGMVAEAHDV 242
Query: 331 LKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+ M + P V + + G C+ V+ A + FD M+ + V NV+ Y+ LI+ YC+
Sbjct: 243 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 302
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ V +A L +EM+ P T+NT++ GLC G + A+ L E + RG +P
Sbjct: 303 IQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE---MVARGQIPD 359
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y L LC+ A LL + G PD + ++L
Sbjct: 360 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTIL 402
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 163/398 (40%), Gaps = 74/398 (18%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TF 150
N + D + M P++V + L+ S+ K SL + M+ P DV T
Sbjct: 560 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 619
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ILI ++C L A +L K GF PDVVT ++ LC
Sbjct: 620 NILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC----------------- 662
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
+M KG P++ TYN LI + C + N+M I N
Sbjct: 663 ---------------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPN 707
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
V + T++ LC G I ++ +M K G + + Y +++ G
Sbjct: 708 VVVFSTVVDALCKEGMIAIAHDVVDMM--IKRGVEPDVVTYTALMDG------------- 752
Query: 331 LKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
C+ +++A + FD M+ +G VPNV Y+ LI+ YCQ +
Sbjct: 753 --------------------HCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQ 792
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ +A L+++M+ G + T+NT++ GLC G + A+ L E + G +P
Sbjct: 793 RMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE---MVASGQIPDLV 849
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
Y L+ LC+ A +LL + G + D L +N
Sbjct: 850 TYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 887
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 180/412 (43%), Gaps = 32/412 (7%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
++D + + + + + PS F +L + K +M + G+ D YT I
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN 146
L+ C R+G F +L + G +P+ V Y TL++ LCK +++ P+
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------MITKGISPD 672
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
T++ LI A C + LL + + +P+VV + V++ LC G + A ++++
Sbjct: 673 IFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 732
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
M ++G P+V TY L+ +C +D A+ VF+ M G
Sbjct: 733 M-------------------MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKG 773
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
N +Y+ LI G C R+D + +L+ M S +G YN++++GL +
Sbjct: 774 CVPNVRSYNILINGYCQIQRMDKAMGLLEQM--SLQGLIADTVTYNTLIHGLCHVGRLQH 831
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A+ +M P V + + C + ++ +A + ++++Y+ I
Sbjct: 832 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 891
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
C+ + A +L ++ G P T+N ++ GLC++G + A KL +
Sbjct: 892 GMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRK 943
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 23/261 (8%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P++ +F++++D L KE + M+ GV+ D TY LM G CL + + + K+
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKV 765
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
M +G PN YN LI+ C+ ++ +A L+ M + VT++ LI C
Sbjct: 766 FDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCH 825
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
L +A+ L + + G +PD+VT +L+ LC + +A+ +L
Sbjct: 826 VGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL-------------- 871
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
K +E ++ YNI I C G L++A D+F+++ G+ + TY+ +I
Sbjct: 872 -----KAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIH 926
Query: 280 GLCSGGRIDDGLKILQLMEDS 300
GLC G +D+ K+ + M+++
Sbjct: 927 GLCKRGLLDEANKLFRKMDEN 947
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 118/256 (46%), Gaps = 7/256 (2%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
++N S LD AL FN M + V ++ L+ + L + + M
Sbjct: 12 SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
+ G + V+ L N+ D A L ++ KL P A + I G CV+G
Sbjct: 72 DSF--GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEG 129
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ +A FD+MI EG PNVV Y LI+ C++ +V EA + EM G P T+N
Sbjct: 130 KIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYN 189
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ GLC+ L+ E + +P + ++ ALC++G A ++ M
Sbjct: 190 SLIHGLCKLCEWKHVTTLMNE---MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 246
Query: 476 VGKGILPDYLTWNSLL 491
+ +G+ P+ +T+N+L+
Sbjct: 247 IHRGVEPNVVTYNALM 262
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
N DEAL +M ++ P VD + + + QM G P+V
Sbjct: 24 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 83
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+I++ C RV A + ++ G+ P A+TF T++ GLC +G +G AL L + +
Sbjct: 84 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD---K 140
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
IG G P Y LI LC+ A + +M+ KGI P+ +T+NSL+ L +
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 500 W-LLLLLLNEMV 510
W + L+NEMV
Sbjct: 201 WKHVTTLMNEMV 212
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+N +L + + L +QM+ + P ++ I C V+ A +++
Sbjct: 48 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 107
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G P+ + LI C E ++ EA L +M G G+ P T+ T+++GLC+ V
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A + E I +G P Y+ LI LC+ ++ + L+ +MV I+PD T N
Sbjct: 168 EAFNIFSE---MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLN 224
Query: 489 SLLICLSQQ 497
+++ L ++
Sbjct: 225 TVVDALCKE 233
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 143/560 (25%), Positives = 253/560 (45%), Gaps = 76/560 (13%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFN----MTPSLKIFNSILDVLVK 58
H + S P ++ + R R+ + A L+ F + PSL+ N++L L +
Sbjct: 128 HLLASFPTSALADAALSTYARLRLPH---LAAQLLHSFRRRGCVRPSLQAANAVLSALAR 184
Query: 59 EDIDLARA----FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
+A F+ ++A + + YT+ +L+ C + D L M+ G+ P
Sbjct: 185 SPSTSPQASLDAFH--SLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSP 242
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLL 170
++V YNTL+++ C+ G +G AR+L++ M++ P T++ L+ AY + + A ++
Sbjct: 243 DAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVV 302
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-----------------R 213
E +FGF PD+ T + LC G+V +A ++ +E + G +
Sbjct: 303 EAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFK 362
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
+ L+EM KG ++ T+NI++ C G L+ AL M +G++ + +T
Sbjct: 363 CQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVIT 422
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE---- 329
Y+TLI C G + ++ M + G K N++LY L +E + +EA E
Sbjct: 423 YNTLIDASCKAGNVAKAFVLMDEM--VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRA 480
Query: 330 -------------------YLKQME--------------KLFPRAVDRSLKILGFCVDGN 356
Y K+ + KL P + I G G
Sbjct: 481 PPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGK 540
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ +A ++++E G VP+ Y+ +IHAYC+E + +A + +M + + P T NT
Sbjct: 541 LTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNT 600
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++GLC G + A+KL E + +G Y+ LI+ALC+ +A M
Sbjct: 601 LMNGLCLYGRLEKAMKLFES---WVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADME 657
Query: 477 GKGILPDYLTWNSLLICLSQ 496
+G+ PD T+N LL LS+
Sbjct: 658 VRGLQPDVFTYNVLLSALSE 677
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 133/545 (24%), Positives = 244/545 (44%), Gaps = 70/545 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + T++ R M+ + + + + P+ +N+++ +K+ D+
Sbjct: 242 PDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDV 301
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTL 122
A M A G + D +TY +L GLC +V + FKL M+ G V P+ V YNTL
Sbjct: 302 VEA-----MTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTL 356
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ + K + A +L+ +M E + VT +I++ C+E L AL LE G
Sbjct: 357 VDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGL 416
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
PDV+T +++ C G V A +++E G + + +
Sbjct: 417 TPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEE 476
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+ ++G +P+ +Y ++++Y + + AL ++++M ++ + TY+TLI+GL
Sbjct: 477 LLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLS 536
Query: 283 SGGRIDDGL-KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-P 339
+ G++ + + K+ +LME G + YN +++ +E ++A ++ +M E F P
Sbjct: 537 TMGKLTEAIDKLNELME---MGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKP 593
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
V + + G C+ G +E A + F+ +E+G +V+ Y+ LI A C++ V A
Sbjct: 594 DVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFF 653
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL-------------------------- 433
+M G P T+N +LS L G A K+
Sbjct: 654 ADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV 713
Query: 434 -------VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
V+ D+ +G Y+ IK LC G + A +L +M+ KG+ D T
Sbjct: 714 ETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNST 773
Query: 487 WNSLL 491
+ +L+
Sbjct: 774 YITLM 778
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 134/270 (49%), Gaps = 8/270 (2%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN T+N+L+ ++C G L AL + M+ G+S + VTY+TL+ C G + + +
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGF 351
L M+ KEG + YN+++ R +A + ++ M P ++ G
Sbjct: 267 LARMK--KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324
Query: 352 CVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G V++A + D+M + G V P+VV Y+ L+ A + +R +A L++EM G
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T N ++ GLCR+G + AL +E G P Y+ LI A C+ G A +
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLE---MMTEEGLTPDVITYNTLIDASCKAGNVAKAFV 441
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
L+ +MV G+ D T N+LL L ++ +
Sbjct: 442 LMDEMVRSGLKMDTFTLNTLLYNLCKEKRY 471
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 9/193 (4%)
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+L P +L + C G + DA +M G P+ V Y+ L++A+C++ + EA
Sbjct: 204 RLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 263
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L+ M G +P +T+NT++S R G + A +VE M G P Y+ L
Sbjct: 264 RTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEA-MTAFGFE--PDLWTYNVL 320
Query: 456 IKALCEKGGFQSASMLLVQMVGKGIL-PDYLTWNSLL-ICLSQQTTWLLLLLLNEM---- 509
LC+ G A L +M GI+ PD +T+N+L+ C Q + L LL EM
Sbjct: 321 AAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKG 380
Query: 510 VSFVMVVHELSAK 522
V +V H + K
Sbjct: 381 VKSSLVTHNIIVK 393
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 209/434 (48%), Gaps = 27/434 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D +Y+ ++ G C + +KL+ MK +G+KPNS Y ++I LC+ K
Sbjct: 695 MELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICK 754
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A S+M P+ + ++ L+ +CK ++ A + S PDV+T T
Sbjct: 755 LAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 814
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C +G +++A ++ E +G + G +K R M + G
Sbjct: 815 IISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG 874
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PNV TY LI C+ G LDSA ++ ++M G+ N TY++++ GLC G I++ +
Sbjct: 875 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 934
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K++ E + G Y +++ + + D+A E L +M + L P V ++ +
Sbjct: 935 KLVGEFEAA--GLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC+ G +ED ++ + M+ +G PN ++CL+ YC ++ A+ + K+M G P
Sbjct: 993 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEP 1052
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ G C N+ A L +E M+ G+G YS LIK ++ F A
Sbjct: 1053 DGKTYENLVKGHCNARNMKEAWFLFQE-MK--GKGFSVSVSTYSVLIKGFFKRKKFVEAR 1109
Query: 470 MLLVQMVGKGILPD 483
+ QM G+ D
Sbjct: 1110 EIFDQMRRDGLAAD 1123
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 212/468 (45%), Gaps = 28/468 (5%)
Query: 47 KIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH 105
++F+ VLV+ + AR + K + V D L + N+ +
Sbjct: 599 RVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFR 658
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEE 161
GV N YN +IH +C+ G++ A L+ ME P+ +++S +I YC+
Sbjct: 659 EFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFG 718
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL------- 214
L L+EK G P+ T ++ LLC + ++ +A E E QG L
Sbjct: 719 ELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYT 778
Query: 215 ---------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
G ++ +F EM + P+V TY +IS +C+ G + A +F++M
Sbjct: 779 TLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCR 838
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G+ + +T+ L+ G C G I D ++ M + G + Y +++ GL +E D
Sbjct: 839 GLEPDIITFTELMNGYCKAGHIKDAFRVHNHM--IQAGCSPNVVTYTTLIDGLCKEGDLD 896
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A E L +M K L P + + G C GN+E+A + + G + V Y L+
Sbjct: 897 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
AYC+ + +A E++ EM G G P TFN +++G C G + KL+ + +
Sbjct: 957 DAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN---WMLAK 1013
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P + ++ L+K C + ++A+ + M +G+ PD T+ +L+
Sbjct: 1014 GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 187/412 (45%), Gaps = 43/412 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL--VKEDIDLARA 66
PD ++ T++ G + I K + ++TP + + +I+ + + ++ +
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+ +M+ G++ D T+ LM G C + D F++ + M G PN V Y TLI L
Sbjct: 832 FH--EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 889
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G + A L+ +M +PN T++ ++ CK N+ A+ L+ + + G D
Sbjct: 890 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 949
Query: 183 VTITKVLELLCSVGRVMDAVEILEE---SGEQGRL-------------GKVKGGCRFLKE 226
VT T +++ C G + A EIL E G Q + G ++ G + L
Sbjct: 950 VTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 1009
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M KG PN T+N L+ YC L +A ++ DM G+ + TY+ L++G C+
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARN 1069
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ + + Q M+ +G +S Y+ ++ G ++ + EA E QM +
Sbjct: 1070 MKEAWFLFQEMKG--KGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRR---------- 1117
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI--YDCLIHAYCQEERVREAS 396
G D + D F +G P+ ++ D +I Y +E++REA+
Sbjct: 1118 --DGLAADKEIFDF---FSDTKYKGKRPDTIVDPIDEIIENYLVDEQLREAN 1164
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 210/442 (47%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P L + ++++ L K DIDLA +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KKM ++ D Y ++ GLC + D L M ++G++P+ Y++LI LC
Sbjct: 246 L-KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTFS LI A+ KE LV A L ++ PD+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A + E M K C PNV TY+ LI
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTYSTLI 405
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ ++ +++F +M G+ N VTY TLI G D+ + + M G
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM--VSVG 463
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN +L GL + + +A+ EYL Q + P ++ I G C G VED
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G PNV+ Y+ +I +C++ EA L+K+M G LP + T+NT++
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 583 RLRDGDREASAELIKE-MRSCG 603
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 218/441 (49%), Gaps = 33/441 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D +T+ L+ GL L N+ + L+ M RG +P+ V Y T+++ LCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A SL+ ME E + V ++ +I CK +++ +AL L + + G PDV T +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M N VTY TLI+G C R+++G
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKI 348
+++ + M S+ G G Y ++++G ++ D A KQM + P + ++ +
Sbjct: 418 MELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G + A F+ + P++ Y+ +I C+ +V + EL ++ G
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P +NT++SG CR+G+ A LK ++ED G LP SG Y+ LI+A G
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKED------GPLPNSGTYNTLIRARLRDGDR 589
Query: 466 QSASMLLVQMVGKGILPDYLT 486
++++ L+ +M G D T
Sbjct: 590 EASAELIKEMRSCGFAGDAST 610
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 229/502 (45%), Gaps = 36/502 (7%)
Query: 19 RGLGRARMINDVVKATDLVSRF-NMT-----PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
R + R R+ +D++K D V F +M PS+ FN +L + K + ++M
Sbjct: 51 REILRNRL-SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D YTY+I + C +++ +L M G +P+ V ++L++ C + ++
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +L+ M E P+ TF+ LI A+ L+++ G PD+VT V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGK--------VKGGCRF---------LKEMERKG 231
+ LC G + A+ +L++ E+G++ + G C++ EM+ KG
Sbjct: 230 VNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+V TY+ LIS C G A + +DM I+ N VT+ LI G++ +
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K+ M K I Y+S++ G ++ DEA + M + FP V S I
Sbjct: 349 KLYDEM--IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC VE+ F +M + G V N V Y LIH + Q A + K+M G P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+N +L GLC+ G + A+ + E R P Y+ +I+ +C+ G +
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME---PDIYTYNIMIEGMCKAGKVEDGW 523
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L + KG+ P+ + +N+++
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMI 545
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 7/275 (2%)
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
ER + D IL + + +D A+D+F DM + V ++ L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+ + + + M+ G + Y+ + R +Q AL L +M KL P V S
Sbjct: 100 ELVISLGEQMQ--TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+C + DA DQM+E G P+ + LIH + EA L+ +M
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+ TV++GLC++G++ AL L+++ +G + Y+ +I LC+
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV---IYNTIIDGLCKYKHM 274
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A L +M KGI PD T++SL+ CL W
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ F +I + + + K D + + ++ P + ++S+++ D +D A+
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ + TY+ L+KG C RV +G +L M RG+ N+V Y TLIH
Sbjct: 386 F-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A+ + M PN +T++IL+ CK L A+V+ E PD+
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D E+ +G V G CR LK+M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LPN TYN LI + G +++ ++ +M+ G + + T L+ + GR+
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 623
Query: 288 D 288
D
Sbjct: 624 D 624
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 215/466 (46%), Gaps = 30/466 (6%)
Query: 56 LVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
LV+ D+ ++M +G D ++ +L++G + G L M G+ PN
Sbjct: 4 LVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPN 63
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEK 172
+++YN LI LCK G + A S + M + PN V+++I+I YCK N+ AL L +
Sbjct: 64 AILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLRE 123
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGK 216
G P + +++ C G V A+++ E +G R K
Sbjct: 124 MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARK 183
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
+ + M +GC P+V TYN +I+ C+ LD A+ + MK + +S FVTY T
Sbjct: 184 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY---GLYRENQQDEALEYLKQ 333
LI LC R+ ++ + M EG P SVL GL + + EA E ++
Sbjct: 244 LIDHLCKFARLQQAYEVFEKM---AEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQE 300
Query: 334 M--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + P V + + G ++DA M+++ PN+ Y+ LI + C+ ++
Sbjct: 301 MRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQ 360
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
V EA +L+ M G++P + +LS L R G + A +L +E M I L GS +
Sbjct: 361 VEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKE-MSRINCQQLVGSSN 419
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ + +G A L QM GI+PD T++ L++ L Q
Sbjct: 420 I--LLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQ 463
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 197/425 (46%), Gaps = 33/425 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF--NMTPSLKIFNSILDVLVK-EDIDLAR 65
P+ ++ +I L +A M+ +A + R + P++ +N I+D K +I+ A
Sbjct: 62 PNAILYNNLISCLCKAGML---AEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKAL 118
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
AF R+ M G + Y+ +++ C T V + M ++G +P+ V +N L+
Sbjct: 119 AFLRE-MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSG 177
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L + K+ AR L M +P+ VT++ +I CK + L A+ LLE+ P
Sbjct: 178 LWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 237
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGE---------QGRLGKVKGGCR---------F 223
VT T +++ LC R+ A E+ E+ E L + G C+
Sbjct: 238 FVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEM 297
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM +G P V TYN L+ T L A+++ M + N TY+ LI LC
Sbjct: 298 FQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCK 357
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
++++ K+L M D +G + + +L L R + D+A E K+M ++ + +
Sbjct: 358 TDQVEEAFKLLSAMRD--KGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLV 415
Query: 344 RSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
S IL G G+V++AK QM + G VP+ YD L+ C + + +A +L++E
Sbjct: 416 GSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEE 475
Query: 402 MTGHG 406
+ G
Sbjct: 476 LVRDG 480
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 204/484 (42%), Gaps = 43/484 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD +IRG ++ D + + P+ ++N+++ L K + LA A
Sbjct: 27 PDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGM-LAEAES 85
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M + +Y I++ G C + L M+ G P Y++++ S CK
Sbjct: 86 YLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCK 145
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V +A + ++M EP+ V F++L+ + + A L S G PDVVT
Sbjct: 146 TGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVT 205
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC ++ +AV +LE M+++ P TY LI
Sbjct: 206 YNTMIAGLCKWKKLDEAVFLLE-------------------RMKQEDVSPTFVTYTTLID 246
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDT--LIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ L A +VF M Y LI GLC R + ++ Q M
Sbjct: 247 HLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEM----- 301
Query: 303 GSKGR-ISP----YNSVLYGLYRENQQDEALE--YLKQMEKLFPRAVDRSLKILGFCVDG 355
+GR ISP YN++L GL + +A+E Y + P + I C
Sbjct: 302 --RGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
VE+A + M ++G VP++ I++ L+ + R+ +A EL KEM+ + + N
Sbjct: 360 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSN 419
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+L G+ R+G+V A +++ G +P Y L+ LC +G A L+ ++
Sbjct: 420 ILLDGILRRGSVDEAKDFLKQ---MTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEEL 476
Query: 476 VGKG 479
V G
Sbjct: 477 VRDG 480
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 8/251 (3%)
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I E ++ A + +MK G S + ++ LIRG G G L M ++
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEA-- 58
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVEDAK 361
G YN+++ L + EA YLK+M + P V ++ I G+C N+E A
Sbjct: 59 GLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKAL 118
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M E G P Y ++ ++C+ V +A ++ EM G P FN +LSGL
Sbjct: 119 AFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGL 178
Query: 422 CRQGNVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
R + A +L R + RG P Y+ +I LC+ A LL +M + +
Sbjct: 179 WRARKIHEAREL----FRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 234
Query: 481 LPDYLTWNSLL 491
P ++T+ +L+
Sbjct: 235 SPTFVTYTTLI 245
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 241/536 (44%), Gaps = 67/536 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ T R +G + + ++ + P++K +L LVK + +L ++++ +
Sbjct: 250 VYCTQFRNVG----FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKAN-ELEKSYWVFET 304
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG-- 130
M GV D Y ++ + C +V D +L M+ GV PN V YN LIH LCK+G
Sbjct: 305 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 364
Query: 131 ---------------------------------KVGRARSLMSDMEE----PNDVTFSIL 153
K A S++ + E PN+V ++ L
Sbjct: 365 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 424
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
I YCK NL +AL + S G P+ VT+ +++ C +G++ A ILEE +G
Sbjct: 425 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 484
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ + RFL+EM + PN L+ C+ G A++
Sbjct: 485 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 544
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
++ + G N VT + LI GLC G + + +++L+ M + G YN+++ G
Sbjct: 545 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE--RGFVLDKITYNTLISG 602
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+E + +E + +M K + P +L I G C G +++A +++ VPN
Sbjct: 603 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 662
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V Y +I YC+ +++ E +L E+ + +NT++ CR GN A KL
Sbjct: 663 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL-H 721
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+DMR +G P + YS LI +C G + A L+ +M +G+LP+ + + +L+
Sbjct: 722 DDMR--SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 775
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 145/586 (24%), Positives = 255/586 (43%), Gaps = 102/586 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD +F T I + + D ++ + + ++P++ +N+++ L K +L AF
Sbjct: 311 PDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHG-NLDEAFR 369
Query: 68 YRKKMMASGVQGDDYTYAILMKGL-----------------------------------C 92
+++KM+ GV TY++L+ GL C
Sbjct: 370 FKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYC 429
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---------- 142
+GD ++ M S+G+ PNSV N++I CK G++ +A ++ +M
Sbjct: 430 KMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG 489
Query: 143 -----------------------------EEPNDVTFSILICAYCKEENLVNALVLLEKS 173
PND + L+ CKE +A+ L +
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 549
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
GF ++VT ++ LC G + +AV +L++ E+G + GKV
Sbjct: 550 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 609
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ G + EM ++G P+ TYN+LI C G LD A++++N+ K + N TY +
Sbjct: 610 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 669
Query: 278 IRGLCSGGRIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
I G C +I++G K+ +L+ + E + YN+++ R EA + M
Sbjct: 670 IDGYCKADKIEEGEKLFTELLTQNLELNS---VVYNTLIRAYCRNGNTVEAFKLHDDMRS 726
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ P S I G C G +EDAK D+M +EG +PNVV Y LI YC+ ++ +
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
+++EM+ + P T+ ++ G + G++ TA KL+ E +G+G +P + Y+
Sbjct: 787 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE---MVGKGIVPDTVTYNV 843
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
L C++G + +L VG P +L + C + W
Sbjct: 844 LTNGFCKEGKIEEGKLLAEDGVGFNS-PLFLIHEAFRACTRRVDLW 888
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 35/365 (9%)
Query: 137 SLMSDMEEPND-----VTFSILICAYCKEENLV---NALVLLEKSFSFGFVPDVVTITKV 188
S M+D+ E + +LI YC + V NA+ + + G P V T T +
Sbjct: 226 SAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFL 285
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
L L LE+S ++ E R+G P+V ++ I+++C+
Sbjct: 286 LSSLVKANE-------LEKS-------------YWVFETMRQGVSPDVYLFSTAINAFCK 325
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G ++ A+ +F DM+ G+S N VTY+ LI GLC G +D+ + + M K+G +
Sbjct: 326 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM--VKDGVNATL 383
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQ-MEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y+ ++ GL + + +EA LK+ +EK F P V + I G+C GN+ DA R
Sbjct: 384 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 443
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+ +G PN V + +I +C+ ++ +A +++EM G+ F T++ LC
Sbjct: 444 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 503
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+AL+ + E + R P G + L+ LC++G A L +++ KG + +T
Sbjct: 504 FESALRFLREMLL---RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 560
Query: 487 WNSLL 491
N+L+
Sbjct: 561 TNALI 565
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 231/486 (47%), Gaps = 44/486 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
P + + T++ G+ + D V A +L+ + ++ P++ I+++I+D L K+
Sbjct: 217 PTQITYGTIVDGMCKK---GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSD 273
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M G+ D +TY ++ G C + R D +LL M R + P+ V YN LI+
Sbjct: 274 AQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALIN 333
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M PN +T+S +I +CK+ L A + + G P
Sbjct: 334 AFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+++T +++ C R+ D +E+L E M G + + TYN
Sbjct: 394 NLITFNTLIDGYCGAKRIDDGMELLHE-------------------MTETGLVADTTTYN 434
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI + G L++ALD+ +M G+ + VT DTL+ GLC G++ D L++ ++M+ S
Sbjct: 435 TLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKS 494
Query: 301 KE---------GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
K+ G + + YN ++ GL E + EA E ++M + P + S I
Sbjct: 495 KKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMID 554
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C +++A + FD M + PNVV + LI+ YC+ RV + EL EM G +
Sbjct: 555 GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVA 614
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
A T+ T++ G + GN+ AL + +E I G P + ++ L K + A
Sbjct: 615 NAITYITLICGFRKVGNINGALDIFQE---MISSGVYPDTITIRNMLTGLWSKEELKRAV 671
Query: 470 MLLVQM 475
+L ++
Sbjct: 672 AMLEKL 677
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 238/529 (44%), Gaps = 82/529 (15%)
Query: 27 INDVVKATDLVS---RFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDY 82
I + A DL S R PS+ F ++ V+V+ E DL + Y +KM ++ D Y
Sbjct: 57 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLY-QKMERKQIRCDIY 115
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
++ IL+K C +++ + G+ P+ V + TL+H LC +V A M
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
E PN VTF+ L+ C+E +V A+ LL++ G P +T +++ +C G
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDT 235
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ A+ +L + E + +PNV Y+ +I S C+ G A ++
Sbjct: 236 VSALNLLRKMEEVSHI------------------IPNVVIYSAIIDSLCKDGRHSDAQNL 277
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSV 314
F +M+ GI + TY+++I G CS GR D ++LQ M + K ISP YN++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERK------ISPDVVTYNAL 331
Query: 315 LYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ +E + EA E +M + P + S I GFC ++ A+ F M +G
Sbjct: 332 INAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGC 391
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN++ ++ LI YC +R+ + EL+ EMT G + +T+NT++ G G++ AL
Sbjct: 392 SPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALD 451
Query: 433 LVEE-------------------------------------------DMRGIGRGSLPGS 449
L++E D G P
Sbjct: 452 LLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
Y+ LI L +G F A L +M +GI+PD +T++S++ L +Q+
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQS 560
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 38/343 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + ++I G + ++ L++ +P+L FN+++D + ID
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M +G+ D TY L+ G L + LL M S G+ P+ V +TL+ LC
Sbjct: 418 LHE-MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 128 KNGKVGRARSLMSDME---------------EPNDVTFSILICAYCKEENLVNALVLLEK 172
NGK+ A + M+ EP+ T++ILI E + A L E+
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 536
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
G VPD +T + +++ LC R+ +A ++ + G K
Sbjct: 537 MPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS-------------------KSF 577
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV T+ LI+ YC+ G +D L++F +M GI N +TY TLI G G I+ L
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
I Q M S G ++L GL+ + + A+ L++++
Sbjct: 638 IFQEMISS--GVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 241/536 (44%), Gaps = 67/536 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ T R +G + + ++ + P++K +L LVK + +L ++++ +
Sbjct: 183 VYCTQFRNVG----FRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKAN-ELEKSYWVFET 237
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG-- 130
M GV D Y ++ + C +V D +L M+ GV PN V YN LIH LCK+G
Sbjct: 238 MRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNL 297
Query: 131 ---------------------------------KVGRARSLMSDMEE----PNDVTFSIL 153
K A S++ + E PN+V ++ L
Sbjct: 298 DEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTL 357
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
I YCK NL +AL + S G P+ VT+ +++ C +G++ A ILEE +G
Sbjct: 358 IDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGF 417
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ + RFL+EM + PN L+ C+ G A++
Sbjct: 418 SINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVE 477
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
++ + G N VT + LI GLC G + + +++L+ M + G YN+++ G
Sbjct: 478 LWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE--RGFVLDKITYNTLISG 535
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+E + +E + +M K + P +L I G C G +++A +++ VPN
Sbjct: 536 CCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPN 595
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V Y +I YC+ +++ E +L E+ + +NT++ CR GN A KL
Sbjct: 596 VYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKL-H 654
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+DMR +G P + YS LI +C G + A L+ +M +G+LP+ + + +L+
Sbjct: 655 DDMR--SKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALI 708
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/577 (24%), Positives = 256/577 (44%), Gaps = 101/577 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD +F T I + + D ++ + + ++P++ +N+++ L K +L AF
Sbjct: 244 PDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHG-NLDEAFR 302
Query: 68 YRKKMMASGVQGDDYTYAILMKGL-----------------------------------C 92
+++KM+ GV TY++L+ GL C
Sbjct: 303 FKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYC 362
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---------- 142
+GD ++ M S+G+ PNSV N++I CK G++ +A ++ +M
Sbjct: 363 KMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPG 422
Query: 143 -----------------------------EEPNDVTFSILICAYCKEENLVNALVLLEKS 173
PND + L+ CKE +A+ L +
Sbjct: 423 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 482
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
GF ++VT ++ LC G + +AV +L++ E+G + GKV
Sbjct: 483 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 542
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ G + EM ++G P+ TYN+LI C G LD A++++N+ K + N TY +
Sbjct: 543 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVM 602
Query: 278 IRGLCSGGRIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
I G C +I++G K+ +L+ + E + YN+++ R EA + M
Sbjct: 603 IDGYCKADKIEEGEKLFTELLTQNLELNS---VVYNTLIRAYCRNGNTVEAFKLHDDMRS 659
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ P S I G C G +EDAK D+M +EG +PNVV Y LI YC+ ++ +
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
+++EM+ + P T+ ++ G + G++ TA KL+ E +G+G +P + Y+
Sbjct: 720 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE---MVGKGIVPDTVTYNV 776
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L C++G + + M +G+ D +T+ +L+
Sbjct: 777 LTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLV 813
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 210/471 (44%), Gaps = 63/471 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P+E ++ T+I G + + D ++ D+VS+ + P+ NSI+ K
Sbjct: 349 PNEVVYNTLIDGYCKMGNLGDALRIRGDMVSK-GINPNSVTLNSIIQGFCKIGQMEQAEC 407
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M++ G + + ++ LC+ +R + L M R ++PN + TL+ LC
Sbjct: 408 ILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLC 467
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK A L + E N VT + LI CK N+ A+ LL+K GFV D +
Sbjct: 468 KEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKI 527
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C G+V + ++ E +QG R+GK+ E
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587
Query: 228 ERKGCLPNVDTY-----------------------------------NILISSYCETGVL 252
+ + +PNV TY N LI +YC G
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A + +DM+ GI TY +LI G+C+ GR++D ++ M KEG + Y
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR--KEGLLPNVVCYT 705
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++ G + Q D+ + L++M + P + ++ I G+ G+++ A + +M+ +
Sbjct: 706 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS-TFNTVLSG 420
G VP+ V Y+ L + +C+E ++ E ++ M+ G LP+ T+ T++ G
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG-LPLDEITYTTLVHG 815
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 176/386 (45%), Gaps = 27/386 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P++ + T++ GL + +D V+ + +L N+++ L K
Sbjct: 454 PNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRL 513
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM+ G D TY L+ G C +V +GFKL M +G++P++ YN LIH +C+
Sbjct: 514 LKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCR 573
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A +L ++ + PN T+ ++I YCK + + L + + + V
Sbjct: 574 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 633
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C G ++A ++ ++ M KG P TY+ LI
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLHDD-------------------MRSKGIPPTTATYSSLIH 674
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C G ++ A + ++M+ +G+ N V Y LI G C G++D + +LQ M S +
Sbjct: 675 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM-SSYDIH 733
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+I+ Y ++ G + A + L +M + + P V ++ GFC +G +E+ +
Sbjct: 734 PNKIT-YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQ 388
D M +EG + + Y L+H + Q
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHGWQQ 818
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 35/365 (9%)
Query: 137 SLMSDMEEPND-----VTFSILICAYCKEENLV---NALVLLEKSFSFGFVPDVVTITKV 188
S M+D+ E + +LI YC + V NA+ + + G P V T T +
Sbjct: 159 SAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFL 218
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
L L LE+S ++ E R+G P+V ++ I+++C+
Sbjct: 219 LSSLVKANE-------LEKS-------------YWVFETMRQGVSPDVYLFSTAINAFCK 258
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G ++ A+ +F DM+ G+S N VTY+ LI GLC G +D+ + + M K+G +
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM--VKDGVNATL 316
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQ-MEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y+ ++ GL + + +EA LK+ +EK F P V + I G+C GN+ DA R
Sbjct: 317 ITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGD 376
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+ +G PN V + +I +C+ ++ +A +++EM G+ F T++ LC
Sbjct: 377 MVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSR 436
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+AL+ + E + R P G + L+ LC++G A L +++ KG + +T
Sbjct: 437 FESALRFLREMLL---RNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 493
Query: 487 WNSLL 491
N+L+
Sbjct: 494 TNALI 498
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/462 (29%), Positives = 217/462 (46%), Gaps = 60/462 (12%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N+ ++ ++SI+ LVKE ++MMA+G D + + +M+G +N +
Sbjct: 5 NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICA 156
++ M G KP++V Y+ LIH L K GK+ + ++S+M + P+ +S L+ A
Sbjct: 65 REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
K + +A L ++ G PD + +++ LC G+V DA E
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASE------------- 171
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
RF K+M + GC PNV YN+L+ C +G L+ A +F +MK S + VTY+T
Sbjct: 172 -----RF-KQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNT 225
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
L+ +C R+++G K+ + M R + Y
Sbjct: 226 LLDAVCKARRVEEGCKLFEAM---------RAAGY------------------------- 251
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P + S I G C G +E A F M+E G PN Y LI C+ E+V +A
Sbjct: 252 -VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAR 310
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
EL ++MT P A +N++++G C++G++ A KL E M G G G P ++ LI
Sbjct: 311 ELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYRE-MSG-GAGLQPTIVTFNTLI 368
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
C+ G A+ L+ +M KG+ D T+ L+ LS+ T
Sbjct: 369 DGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRAT 410
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 204/427 (47%), Gaps = 35/427 (8%)
Query: 3 HSIQS--PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-E 59
H ++S PD + +I GL + +++ +K + TPS++ ++S++ L K
Sbjct: 70 HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKAR 129
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A + + +M+ G D + L+ GLC +V D + M G +PN +Y
Sbjct: 130 RVDHASSLF-DEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N L+H LC +G++ +A +L ++M+ P+ VT++ L+ A CK + L E +
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
G+VP+V+T + ++ LC G + A+E+ E G R KV
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-GISWNFVTYDTLI 278
++M + P+ YN LI+ YC+ G +D A ++ +M G+ VT++TLI
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLYRENQQDEALEYLKQM- 334
G C G++ +++ M G+KG + Y ++ GL R + DEALE KQM
Sbjct: 369 DGFCKLGKLGRANELVAEM-----GTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMR 423
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+K V + G C GN++ A F+ + G VPN + L + + RV
Sbjct: 424 EKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVE 483
Query: 394 EASELMK 400
+A +LM+
Sbjct: 484 DAQKLME 490
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M+ I+ N TY ++I+ L + ++ K+L+ M + G + +N V+ G R
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAA--GCNPDVFAFNGVMQGFARS 58
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
N ++A E + M P V + I G G ++++ + +M+ G P++ Y
Sbjct: 59 NNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAY 118
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
L+ A + RV AS L EM G+ P F ++ GLC+ G V A + ++ +
Sbjct: 119 SSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPK 178
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ L+ LC G + A+ L +M PD +T+N+LL
Sbjct: 179 ---HGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 222/492 (45%), Gaps = 34/492 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P F T+I L + + + + R++ P+ + S IL ++DLA A
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G + TY+ L+ GLC R+ + +L M +G++P Y + SLC
Sbjct: 260 F-DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G A L+ M++ PN TF+ LI ++ A+ L K + G VP V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC GR A I K M G LP+ TYN +I
Sbjct: 379 TYNALINQLCVEGRFETAFTIF-------------------KWMLSHGSLPSTQTYNEII 419
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C G + A+ +F+ M G S N +TY+TLI G C G +++ +++L++M+ + G
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN--G 477
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
K Y ++ G R + + A M + + P V + I G+ V+DA
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M+E G +P+ Y+ +I + + + EA +M G LP T+ + + GL
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM--LLVQMVGKG 479
CR G G A K+ E + R P YS LI LC++G + A M LL ++ G
Sbjct: 598 CRNGRTGLAFKIFHEMEK---RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYG 654
Query: 480 ILPDYLTWNSLL 491
P+ T+ +L+
Sbjct: 655 CEPNVDTYTTLV 666
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 207/448 (46%), Gaps = 62/448 (13%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M + G++P+ + +NT+I+ LCK G+V A+ +MS + PN T++ LI +C+ N
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV----- 217
L A + ++ G P+ VT + ++ LCS GR+ +A+++LEE ++G V
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 218 ------KGGC-----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
GC L +M+++GC+PN+ T+ LIS G + A+ +++ M DG
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-------------------------- 300
+ VTY+ LI LC GR + I + M
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 301 -------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
K GS + YN+++YG ++ + A+ L+ M+ L P A + I GF
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
G +E A F M+E G PN V Y +I Y +V +A L +M G LP +
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRG--IGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+N ++SG + ++ A E+ G + +G LP Y+ I LC G A
Sbjct: 553 QTYNVMISGFSKTNSISEA-----ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ +M + P+ T++SL+ L Q+
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQE 635
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/579 (26%), Positives = 246/579 (42%), Gaps = 68/579 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I G R ++ D + + P+ ++++++ L E
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ G++ YTY I + LC + +LL MK RG PN + LI L +
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 129 NGK----VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK +G +++D P VT++ LI C E A + + S G +P T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++++ C +G + A+ I ++ + G + G + R L+ M+
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TY LIS + G L+ A +F M GIS N VTY +I G + ++D
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
D L + M +S G+ YN ++ G + N EA + +M K L P + +
Sbjct: 535 DALALFWKMVES--GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS--ELMKEMTG 404
I G C +G A + F +M + PN+ Y LI+ CQE R +A L+ +T
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLV-----------EEDMRGIGRG--------- 444
+G P T+ T++ GLC +G A +LV EE R + G
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 445 ------SLPGSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
S+ G Y LI ALC++ + A + M+ K D + W LL
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLD 772
Query: 493 -CLSQQTTWLLLLLLNEMVS---------FVMVVHELSA 521
L + T L L LL+ M S +VM+ ELSA
Sbjct: 773 GLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSA 811
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 215 GKVKGGCRFLKEMERKGCLP-NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
G+VK +FL E+ K + ++ L+ + ++D A D++ M GI + +T
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
++T+I LC GR+ + I+ + + + Y S++ G R + D A +
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHI--FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M K P +V S I G C +G +E+A ++M+++G P V Y + + C
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
EA EL+ +M G +P TF ++SGL R G A+ L + + G +P +
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYH---KMLADGLVPTTVT 379
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
Y+ LI LC +G F++A + M+ G LP T+N ++ C
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 222/492 (45%), Gaps = 34/492 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P F T+I L + + + + R++ P+ + S IL ++DLA A
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAM 259
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G + TY+ L+ GLC R+ + +L M +G++P Y + SLC
Sbjct: 260 F-DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLC 318
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G A L+ M++ PN TF+ LI ++ A+ L K + G VP V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC GR A I K M G LP+ TYN +I
Sbjct: 379 TYNALINQLCVEGRFETAFTIF-------------------KWMLSHGSLPSTQTYNEII 419
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C G + A+ +F+ M G S N +TY+TLI G C G +++ +++L++M+ + G
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN--G 477
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
K Y ++ G R + + A M + + P V + I G+ V+DA
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M+E G +P+ Y+ +I + + + EA +M G LP T+ + + GL
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM--LLVQMVGKG 479
CR G G A K+ E + R P YS LI LC++G + A M LL ++ G
Sbjct: 598 CRNGRTGLAFKIFHEMEK---RNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYG 654
Query: 480 ILPDYLTWNSLL 491
P+ T+ +L+
Sbjct: 655 CEPNVDTYTTLV 666
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 207/448 (46%), Gaps = 62/448 (13%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M + G++P+ + +NT+I+ LCK G+V A+ +MS + PN T++ LI +C+ N
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV----- 217
L A + ++ G P+ VT + ++ LCS GR+ +A+++LEE ++G V
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 218 ------KGGC-----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
GC L +M+++GC+PN+ T+ LIS G + A+ +++ M DG
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-------------------------- 300
+ VTY+ LI LC GR + I + M
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 301 -------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
K GS + YN+++YG ++ + A+ L+ M+ L P A + I GF
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
G +E A F M+E G PN V Y +I Y +V +A L +M G LP +
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSS 552
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRG--IGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+N ++SG + ++ A E+ G + +G LP Y+ I LC G A
Sbjct: 553 QTYNVMISGFSKTNSISEA-----ENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ +M + P+ T++SL+ L Q+
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQE 635
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 152/579 (26%), Positives = 246/579 (42%), Gaps = 68/579 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I G R ++ D + + P+ ++++++ L E
Sbjct: 235 PNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDM 294
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ G++ YTY I + LC + +LL MK RG PN + LI L +
Sbjct: 295 LEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSR 354
Query: 129 NGK----VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK +G +++D P VT++ LI C E A + + S G +P T
Sbjct: 355 DGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQT 414
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++++ C +G + A+ I ++ + G + G + R L+ M+
Sbjct: 415 YNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMK 474
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TY LIS + G L+ A +F M GIS N VTY +I G + ++D
Sbjct: 475 GNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVD 534
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
D L + M +S G+ YN ++ G + N EA + +M K L P + +
Sbjct: 535 DALALFWKMVES--GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS--ELMKEMTG 404
I G C +G A + F +M + PN+ Y LI+ CQE R +A L+ +T
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLV-----------EEDMRGIGRG--------- 444
+G P T+ T++ GLC +G A +LV EE R + G
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 445 ------SLPGSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
S+ G Y LI ALC++ + A + M+ K D + W LL
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLD 772
Query: 493 -CLSQQTTWLLLLLLNEMVS---------FVMVVHELSA 521
L + T L L LL+ M S +VM+ ELSA
Sbjct: 773 GLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSA 811
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 8/283 (2%)
Query: 215 GKVKGGCRFLKEMERKGCLP-NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
G+VK +FL E+ K + ++ L+ + ++D A D++ M GI + +T
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
++T+I LC GR+ + I+ + + + Y S++ G R + D A +
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHI--FRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M K P +V S I G C +G +E+A ++M+++G P V Y + + C
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
EA EL+ +M G +P TF ++SGL R G A+ L + + G +P +
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYH---KMLADGLVPTTVT 379
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
Y+ LI LC +G F++A + M+ G LP T+N ++ C
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCF 422
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 221/444 (49%), Gaps = 42/444 (9%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PSL F+ + + + ++ DL F K+M +G++ + YT I++ C ++ F
Sbjct: 67 PSLIDFSKLFSAVARRKEYDLVLGFC-KEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFS 125
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
++ G +PN++ ++TLI+ C G+V A +L+ M E PN VT + LI C
Sbjct: 126 VVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLC 185
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ + ALVL+++ +G + +T VL +C G A+++
Sbjct: 186 LKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLF------------- 232
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
++ME + +V Y+I+I S C+ G LD AL +FN+M++ GI + V Y ++I
Sbjct: 233 ------RKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGR-----ISPYNSVLYGLYRENQQDEALEYLKQ 333
GLC+ GR DDG K+L+ M GR + +++++ +E + EA E +
Sbjct: 287 GGLCNDGRWDDGAKMLREM-------IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 334 M--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + P + S I GFC + + +A + D M+ +G PN+V Y LI++YC+ +R
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
V L E++ G + T+NT++ G C+ G + A +L +E + RG P
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE---MVSRGVPPSVVT 456
Query: 452 YSPLIKALCEKGGFQSASMLLVQM 475
Y L+ LC+ G Q A + +M
Sbjct: 457 YGILLDGLCDNGELQKALEIFEKM 480
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/513 (23%), Positives = 232/513 (45%), Gaps = 70/513 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F T+I G +++ V D + P++ N++++ L +
Sbjct: 137 PNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVL 196
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G + ++ TY ++ +C + L M+ R +K + V Y+ +I SLCK
Sbjct: 197 IDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCK 256
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + A SL ++ME + + V +S +I C + + +L + +P+VVT
Sbjct: 257 DGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVT 316
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------------------RLGKVKGGCRFLK 225
+ ++++ G++++A E+ E +G RLG+ + L
Sbjct: 317 FSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEAN---QMLD 373
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
M KGC PN+ TY+ILI+SYC+ +D+ + +F ++ G+ + VTY+TL++G C G
Sbjct: 374 LMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSG 433
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
+++ ++ Q M R P + V YG+ +
Sbjct: 434 KLNVAKELFQEM-------VSRGVPPSVVTYGILLD------------------------ 462
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
G C +G ++ A F++M + + + IY+ +IH C +V +A L ++
Sbjct: 463 ----GLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVK 518
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P T+N ++ GLC++G++ A + ++ED G P Y+ LI+A
Sbjct: 519 GVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKED------GCAPSDCTYNILIRAHLGG 572
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
G S+ L+ +M +G D T +++ LS
Sbjct: 573 SGVISSVELIEEMKMRGFAADASTIKMVVVMLS 605
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 140/304 (46%), Gaps = 58/304 (19%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N+ P++ F++++DV VKE L +M+A G+ D TY+ L+ G C NR+G+
Sbjct: 309 NIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEA 368
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
++L +M S+G +PN V Y+ LI+S CK +V L ++ + VT++ L+
Sbjct: 369 NQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQG 428
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-- 214
+C+ L A L ++ S G P VVT +L+ LC G + A+EI E ++ R+
Sbjct: 429 FCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF-EKMQKSRMIL 487
Query: 215 ---------------GKVK--------------------------GGCR---------FL 224
KV G C+
Sbjct: 488 GIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLF 547
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
++M+ GC P+ TYNILI ++ + S++++ +MK+ G + + T ++ L S
Sbjct: 548 RKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVML-SD 606
Query: 285 GRID 288
GR+D
Sbjct: 607 GRLD 610
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
KV + M + LP++ ++ L S+ D L +M ++GI N T +
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+I C ++ L+ + AL++
Sbjct: 109 IMINCFCRKRKL------------------------------LFAFSVVGRALKF----- 133
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P + S I GFC++G V +A D+M+E PNVV + LI+ C + RV EA
Sbjct: 134 GFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEA 193
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG-HYSP 454
L+ M +G T+ VL+ +C+ GN AL L R + S+ S YS
Sbjct: 194 LVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDL----FRKMEERSIKASVVQYSI 249
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+I +LC+ G A L +M KGI D + ++S++ L W
Sbjct: 250 VIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRW 295
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 226/455 (49%), Gaps = 46/455 (10%)
Query: 31 VKATDLVSRFN------MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
+KA D + F P++ F+ + + K + DL A K+M G+ + YT
Sbjct: 67 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALC-KQMELKGIAHNLYT 125
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+I++ C ++ F + + G +PN++ ++TLI+ LC G+V A L+ M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P+ +T + L+ C A++L++K +G P+ VT VL ++C G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A+E+L ++ME + + Y+I+I C+ G LD+A ++F
Sbjct: 246 LAMELL-------------------RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVL 315
N+M++ GI+ N +TY+ LI G C+ GR DDG K+L+ M K +I+P ++ ++
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM------IKRKINPNVVTFSVLI 340
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + EA E K+M + P + + I GFC + +++ A + D M+ +G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN+ ++ LI+ YC+ R+ + EL ++M+ G + T+NT++ G C G + A +L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+E + R P Y L+ LC+ G + A
Sbjct: 461 FQE---MVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 217/454 (47%), Gaps = 26/454 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F T+I GL +++ ++ D + P L N++++ L +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ G Q + TY ++ +C + + +LL M+ R +K ++V Y+ +I LCK
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + A +L ++ME N +T++ILI +C + LL P+VVT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEME 228
+ +++ G++ +A E+ +E +G + G C+ + M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN+ T+NILI+ YC+ +D L++F M + G+ + VTY+TLI+G C G+++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD---RS 345
++ Q M K I Y +L GL + ++ALE +++EK +D +
Sbjct: 456 VAKELFQEMVSRK--VPPNIVTYKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYN 512
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C V+DA F + +G P V Y+ +I C++ + EA L ++M
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
G+ P T+N ++ G+ ++KL+EE R
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 206/436 (47%), Gaps = 26/436 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD T++ GL + + + D + + P+ + +L+V+ K LA
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M ++ D Y+I++ GLC + + F L + M+ +G+ N + YN LI C
Sbjct: 251 LRK-MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ L+ DM + PN VTFS+LI ++ KE L A L ++ G PD +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ C + A ++++ +G + ++ G ++M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G + + TYN LI +CE G L+ A ++F +M + N VTY L+ GLC G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRS 345
+ L+I + +E SK + I YN +++G+ ++ D+A + ++ + P +
Sbjct: 490 EKALEIFEKIEKSK--MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C G + +A+ F +M E+G P+ Y+ LI A+ + ++ +L++E+
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 406 GYLPIASTFNTVLSGL 421
G+ AST V+ L
Sbjct: 608 GFSVDASTIKMVIDML 623
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P + S++D KE+ +D A M++ G + T+ IL+ G C NR+ DG
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+L M RGV ++V YNTLI C+ GK+ A+ L +M PN VT+ IL+
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
C AL + EK D+ ++ +C+ +V DA ++ +G
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 217 VK-------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
VK G C+ ++ME G P+ TYNILI ++ G ++ +
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 261 DMKIDGISWNFVTYDTLIRGLCSG 284
++K G S + T +I L G
Sbjct: 603 ELKRCGFSVDASTIKMVIDMLSDG 626
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 226/455 (49%), Gaps = 46/455 (10%)
Query: 31 VKATDLVSRFN------MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
+KA D + F P++ F+ + + K + DL A K+M G+ + YT
Sbjct: 165 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALC-KQMELKGIAHNLYT 223
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+I++ C ++ F + + G +PN++ ++TLI+ LC G+V A L+ M
Sbjct: 224 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 283
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P+ +T + L+ C A++L++K +G P+ VT VL ++C G+
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A+E+L ++ME + + Y+I+I C+ G LD+A ++F
Sbjct: 344 LAMELL-------------------RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVL 315
N+M++ GI+ N +TY+ LI G C+ GR DDG K+L+ M K +I+P ++ ++
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM------IKRKINPNVVTFSVLI 438
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + EA E K+M + P + + I GFC + +++ A + D M+ +G
Sbjct: 439 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 498
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN+ ++ LI+ YC+ R+ + EL ++M+ G + T+NT++ G C G + A +L
Sbjct: 499 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 558
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+E + R P Y L+ LC+ G + A
Sbjct: 559 FQE---MVSRKVPPNIVTYKILLDGLCDNGESEKA 590
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 216/451 (47%), Gaps = 26/451 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F T+I GL +++ ++ D + P L N++++ L +
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 313
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ G Q + TY ++ +C + + +LL M+ R +K ++V Y+ +I LCK
Sbjct: 314 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 373
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + A +L ++ME N +T++ILI +C + LL P+VVT
Sbjct: 374 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 433
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEME 228
+ +++ G++ +A E+ +E +G + G C+ + M
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 493
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN+ T+NILI+ YC+ +D L++F M + G+ + VTY+TLI+G C G+++
Sbjct: 494 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 553
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD---RS 345
++ Q M K I Y +L GL + ++ALE +++EK +D +
Sbjct: 554 VAKELFQEMVSRK--VPPNIVTYKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYN 610
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C V+DA F + +G P V Y+ +I C++ + EA L ++M
Sbjct: 611 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 670
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
G+ P T+N ++ G+ ++KL+EE
Sbjct: 671 GHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 204/435 (46%), Gaps = 24/435 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD T++ GL + + + D + + P+ + +L+V+ K
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 348
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM ++ D Y+I++ GLC + + F L + M+ +G+ N + YN LI C
Sbjct: 349 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 408
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ L+ DM + PN VTFS+LI ++ KE L A L ++ G PD +T
Sbjct: 409 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 468
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T +++ C + A ++++ +G + ++ G ++M
Sbjct: 469 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 528
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G + + TYN LI +CE G L+ A ++F +M + N VTY L+ GLC G +
Sbjct: 529 LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 588
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSL 346
L+I + +E SK + I YN +++G+ ++ D+A + ++ + P ++
Sbjct: 589 KALEIFEKIEKSK--MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 646
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G + +A+ F +M E+G P+ Y+ LI A+ + ++ +L++E+ G
Sbjct: 647 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 706
Query: 407 YLPIASTFNTVLSGL 421
+ AST V+ L
Sbjct: 707 FSVDASTIKMVIDML 721
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 241/519 (46%), Gaps = 65/519 (12%)
Query: 17 VIRGLGRARMINDVVKATDLVSR----------FNMTPSLKIFNSILDVL----VKEDID 62
++ G+ + D + T L+S+ +N+ +L + N + D + +
Sbjct: 104 LVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLG 163
Query: 63 LARAFYR-----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG------ 111
AR F + +KM +Q T+ IL+ LC R+ D ++ MK
Sbjct: 164 KAREFGKMNLLMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVF 223
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLM----SDMEEPNDVTFSILICAYCKEENLVNAL 167
V P++++YNTLI LCK G+ A LM SD P TF+ LI YC+ + A
Sbjct: 224 VAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAH 283
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
L + + P+V+T+ +++ +C R+ AVE F + M
Sbjct: 284 KLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVE-------------------FFRVM 324
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
++KG N TY + I+++C ++ A++ ++M DG + V Y TLI GL GR+
Sbjct: 325 QQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRL 384
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRS 345
DD ++ ++++ G YN ++ ++N+ D A E+L +ME + P +V +
Sbjct: 385 DDASSVVSKLKEA--GFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYN 442
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMT- 403
I F GN + A + +M EE G+ P V Y LIHAYC + EA ++ KEM
Sbjct: 443 TLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNN 502
Query: 404 -GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P +N ++ LC+Q V AL L++ DM+ RG +P + Y+ + KAL +K
Sbjct: 503 VASKVPPNTVIYNILIDSLCKQTQVNFALSLLD-DMKF--RGVMPNTTTYNSIFKALRDK 559
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
A L+ +MV + PDY+T L T WL
Sbjct: 560 NWLDKAFKLMDRMVEQACNPDYITMEIL-------TEWL 591
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 220/508 (43%), Gaps = 81/508 (15%)
Query: 48 IFNSILDV-----LVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
+FN++L + VKED A K + D L+ LC + +
Sbjct: 82 VFNNLLKIDGLEGRVKED---EIAGLVSKFGKHNIFPDTIALTQLISKLCRSGNTNLAWN 138
Query: 103 LL-HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAY 157
+L ++M G+K ++ N L+ L K + G+ LM M+ +P +TF ILI
Sbjct: 139 ILDNLMMLNGLK-DAAPCNALLTGLGKAREFGKMNLLMRKMKDMNIQPTVITFGILINHL 197
Query: 158 CKEENLVNALVLLEK------SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
CK + +AL + EK PD + +++ LC VGR +A+ ++
Sbjct: 198 CKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLM------ 251
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GK M C P T+N LI+ YC +G ++ A +FN+M+ I N
Sbjct: 252 ---GK----------MRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNV 298
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+T +TL+ G+C RI ++ ++M+ ++G KG Y + N ++A+E+L
Sbjct: 299 ITLNTLVDGMCKHNRISTAVEFFRVMQ--QKGLKGNNVTYTVFINAFCNVNNMNKAMEFL 356
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M K FP AV I G G ++DA ++ E G + V Y+ LI +C++
Sbjct: 357 DEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKK 416
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLS------------------------------ 419
++ A E + EM G P + T+NT++S
Sbjct: 417 NKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFT 476
Query: 420 ------GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
C N+ A+K+ +E M + P + Y+ LI +LC++ A LL
Sbjct: 477 YGALIHAYCLNNNIDEAIKIFKE-MNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLD 535
Query: 474 QMVGKGILPDYLTWNSLLICLSQQTTWL 501
M +G++P+ T+NS+ L + WL
Sbjct: 536 DMKFRGVMPNTTTYNSIFKALRDK-NWL 562
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 30/340 (8%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-I 61
S Q P + F +I G R+ I K + + + P++ N+++D + K + I
Sbjct: 255 RSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRI 314
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
A F+R M G++G++ TY + + C N + + L M G P++V+Y T
Sbjct: 315 STAVEFFRV-MQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYT 373
Query: 122 LIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI L + G++ A S++S ++E + V +++LI +CK+ L A L + G
Sbjct: 374 LICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAG 433
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM-ERKGCLPNV 236
PD VT ++ ++G K +F+K+M E +G P V
Sbjct: 434 VKPDSVTYNTLISYF-------------------SKIGNFKLAHKFMKKMTEEEGLSPTV 474
Query: 237 DTYNILISSYCETGVLDSALDVFNDMK--IDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
TY LI +YC +D A+ +F +M + N V Y+ LI LC +++ L +L
Sbjct: 475 FTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLL 534
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
M+ G + YNS+ L +N D+A + + +M
Sbjct: 535 DDMK--FRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRM 572
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 9 PDESIFITVIR---GLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLA 64
PD + T+I +G ++ + +K + ++P++ + +++ + +ID A
Sbjct: 436 PDSVTYNTLISYFSKIGNFKLAHKFMKK--MTEEEGLSPTVFTYGALIHAYCLNNNIDEA 493
Query: 65 -RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ F +AS V + Y IL+ LC +V LL MK RGV PN+ YN++
Sbjct: 494 IKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIF 553
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
+L + +A LM M E P+ +T IL
Sbjct: 554 KALRDKNWLDKAFKLMDRMVEQACNPDYITMEIL 587
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 241/540 (44%), Gaps = 70/540 (12%)
Query: 11 ESIFITVIRGLGRA----RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
E + I RA R + +A+DL R P ++++N +LD L++E++ A
Sbjct: 86 EDALVAAIGAFARAGSADRALKTFYRASDLGCR---DPGVRVYNHLLDALLRENMVGAVV 142
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M +GV + YTY +L++ LC +RV K+L M +G P+ V + T++ +
Sbjct: 143 PVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGM 202
Query: 127 CKNGKVGRARSLMSDME----------------------------------EPNDVTFSI 152
CK G+V AR +++ +PN VT++
Sbjct: 203 CKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 262
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
++ A+CK L A +L + S G P+V+T T +++ G+V DA+ + ++G
Sbjct: 263 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 322
Query: 213 R----------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+G +KG F M+R LPN TY+ L+ + G LD A+
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 382
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ--LMEDSKEGSKGRISPYNSV 314
++N+MK G N V Y +I LC D ++ LM++ + +N++
Sbjct: 383 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT----VTFNTL 438
Query: 315 LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGG 372
+ L + AL M + DR+ L G +GN +DA +M+ G
Sbjct: 439 IGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGF 498
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
++V Y+ +I+ CQ + A L+ M G P A TFN ++ C++G V A
Sbjct: 499 ELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAAC 558
Query: 433 LV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ + + R + Y+ LI LC +G +A + L++M+ +GI P+ TWN L+
Sbjct: 559 LLGQMNAVNCPRNVVA----YTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 25/278 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
P+ + + T++ G A ++ + + + P++ ++ +++DVL K+ + D A +
Sbjct: 360 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 419
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM+ + T+ L+ LC RVG + H M+ G PN YN L+H L
Sbjct: 420 I-DKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLF 478
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A +++ +M E + VT++ +I C+ +A++LL + G PD
Sbjct: 479 REGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAF 538
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C + GKV L +M C NV Y ILI
Sbjct: 539 TFNAIIHAYC-------------------KEGKVSIAACLLGQMNAVNCPRNVVAYTILI 579
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
S C G L +A+ M +GI N T++ L+R +
Sbjct: 580 SELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 617
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 238/486 (48%), Gaps = 32/486 (6%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
D + + + P++ I+N ++ L +E D + F +M + G TY L+ G C
Sbjct: 200 DSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMF--DEMCNINLVGSIVTYNTLIDGYC 257
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
+ FK+ MK + V PN + +N+L+ LCK K+ ARSL+ +ME P+
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+SIL + ++ A+ L E++ G + T + +L LC G+V A EIL++
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377
Query: 209 GEQGRLGK-------VKGGCRF---------LKEMERKGCLPNVDTYNILISSYCETGVL 252
E G + V G CR ++ ME G PN T+N LI +C+ +
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEM 437
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A + M G++ + TY+TLI G D +IL+ ME+ G K + Y
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEI--GVKPNVVSYG 495
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ L ++ + EA L+ M + P A ++ I G C+ G V+DA R FD+M+
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
P +V Y+ LI C++ ++ EA + + ++T G+ P T+N+++SG GNV
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L L E M+ +G P Y PLI C K G + L +M+ +LPD + +N++
Sbjct: 616 LGLY-ETMKNLGIK--PTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAM 671
Query: 491 LICLSQ 496
+ C ++
Sbjct: 672 IHCYAE 677
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 207/442 (46%), Gaps = 33/442 (7%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
SG + D + YA ++ + G + L M+ RGV+PN IYN LI LC+ ++
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229
Query: 135 ARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A + +M N VT++ LI YCK L A + E+ P+++T +L
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC + ++ +A +L+E G R G ++ KG
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N T +IL++ C+ G ++ A ++ +G+ + V Y+T + G C G ++ + +
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD 354
+ ME G + +NS++ + D+A E++K+M + + V S++ +D
Sbjct: 410 ERMESF--GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAE---KGVTPSVETYNTLID 464
Query: 355 --GNVEDAKRCF---DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G + RCF +QM E G PNVV Y LI+ C++ ++ EA ++++M G LP
Sbjct: 465 GYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLP 524
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
A +N ++ G C G V AL+ +E MR P Y+ LI LC+KG A
Sbjct: 525 NAQVYNMLIDGSCMVGKVKDALRFFDEMMRS---EISPTLVTYNVLIDGLCKKGKLTEAE 581
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L Q+ G PD +T+NSL+
Sbjct: 582 DFLTQITSSGHSPDVITYNSLI 603
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 234/511 (45%), Gaps = 28/511 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ F +++ GL + R + + + P ++ + D L++ +D + A
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++ G++ ++YT +IL+ GLC +V ++L G+ + VIYNT ++ C
Sbjct: 339 Y-EQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A + ME PN +TF+ LI +C + + A ++K G P V
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457
Query: 184 TITKVLE---LLCSVGRVMDAVEILEESGEQGRL-------------GKVKGGCRFLKEM 227
T +++ LC+ R +E +EE G + + GK+ L++M
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDM 517
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G LPN YN+LI C G + AL F++M IS VTY+ LI GLC G++
Sbjct: 518 ICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKL 577
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL- 346
+ L + S G + YNS++ G + L + M+ L + R+
Sbjct: 578 TEAEDFLTQITSS--GHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
++ C +E ++ +++M++ +P+ V+Y+ +IH Y + ++A L + M G
Sbjct: 636 PLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQG 695
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+N+++ G R+G + LV +M+ + P + Y L+K C+ F
Sbjct: 696 IHPDKMTYNSLILGHFREGKLSNIKDLV-NNMK--AKELAPKADTYDILVKGHCDLKDFS 752
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A + +MV LP+ N L L Q+
Sbjct: 753 GAYVWYREMVENNFLPNASICNELTAGLEQE 783
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 183/430 (42%), Gaps = 61/430 (14%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK---LLHVMKSRGVKPNSVIYNTLIHSL 126
KK +G+ D+ Y + G C R+GD K + M+S G++PNS+ +N+LI
Sbjct: 375 KKFTENGLVADEVIYNTFVNGYC---RIGDMNKAILTIERMESFGLRPNSITFNSLIDKF 431
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C ++ +A + M E P+ T++ LI Y K +LE+ G P+V
Sbjct: 432 CDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNV 491
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKE 226
V+ ++ LC G++++A +L + +G L GKVK RF E
Sbjct: 492 VSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDE 551
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M R P + TYN+LI C+ G L A D + G S + +TY++LI G + G
Sbjct: 552 MMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGN 611
Query: 287 IDDGLKILQLMED-----------------SKEGSKGRISPYNSVL-------------- 315
+ L + + M++ SKEG + YN +L
Sbjct: 612 VSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAM 671
Query: 316 ---YGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
Y Q+ +L + + P + + ILG +G + + K + M +
Sbjct: 672 IHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKEL 731
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P YD L+ +C + A +EM + +LP AS N + +GL ++G +
Sbjct: 732 APKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQV 791
Query: 433 LVEE-DMRGI 441
+ E +++GI
Sbjct: 792 ICSEMNVKGI 801
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 192/439 (43%), Gaps = 65/439 (14%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
DE I+ T + G R +N + + + F + P+ FNS++D +++D A +
Sbjct: 385 DEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWV 444
Query: 69 RKKMMASGVQGDDYTYAILMKG---LCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
KKM GV TY L+ G LC +R F++L M+ GVKPN V Y +LI+
Sbjct: 445 -KKMAEKGVTPSVETYNTLIDGYGKLCTFDRC---FQILEQMEEIGVKPNVVSYGSLINC 500
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+GK+ A ++ DM PN +++LI C + +AL ++ P
Sbjct: 501 LCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPT 560
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+VT +++ LC G++ +A + FL ++ G P+V TYN
Sbjct: 561 LVTYNVLIDGLCKKGKLTEAED-------------------FLTQITSSGHSPDVITYNS 601
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG-----RIDDGLKILQL 296
LIS Y G + L ++ MK GI TY LI G G ++ + + + L
Sbjct: 602 LISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNL 661
Query: 297 MED-----------SKEGSKGR------------ISP----YNSVLYGLYRENQQDEALE 329
+ D ++ G+ + I P YNS++ G +RE + +
Sbjct: 662 LPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKD 721
Query: 330 YLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+ M+ +L P+A + + G C + A + +M+E +PN I + L
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLE 781
Query: 388 QEERVREASELMKEMTGHG 406
QE R++E + EM G
Sbjct: 782 QEGRLQEVQVICSEMNVKG 800
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 238/491 (48%), Gaps = 31/491 (6%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E ++++ +R GR + + V + + +N PS+ +N+I+++LV+ + A Y
Sbjct: 76 EGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYL 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M G+ D T+ I +K C T R +LL+ M S+G + N+V+Y T+I +
Sbjct: 136 R-MKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEE 194
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
A L + M P+ TF+ L+ CK+ +L LL K G P++ T
Sbjct: 195 NYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTF 254
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ LC G +LE G KV +L +M KG P+ TYN +I
Sbjct: 255 NIFIQGLCRKG-------VLE-----GANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
Y + G + A + D K G + TY +LI G+C G ID L + + E +G K
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFE--EALGKGLK 360
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
I YN+++ GL ++ +AL+ + M K + P +L I G C G V DA
Sbjct: 361 PSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNL 420
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ I +G +P++ ++ LI YC+ ++ A ++ M HG P T+N++L+GLC+
Sbjct: 421 LNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK 480
Query: 424 QG---NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+V K++ E +G LP Y+ LI++LC+ A LL ++ +G+
Sbjct: 481 AAKPEDVMETFKMIME------KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGL 534
Query: 481 LPDYLTWNSLL 491
+PD +++ +++
Sbjct: 535 IPDPVSFGTVI 545
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 120/501 (23%), Positives = 248/501 (49%), Gaps = 35/501 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ TVI G + + + + R + P + FN ++ +L K+ K+
Sbjct: 183 VYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKV 242
Query: 73 MASGVQGDDYTYAILMKGLC-------LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +GV + +T+ I ++GLC ++V + LH M ++G++P+ YNT+I+
Sbjct: 243 LKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYG 302
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K GK+ A ++ D + P++ T+ LI C++ ++ +AL L E++ G P
Sbjct: 303 YSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPS 362
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
+V +++ L G V+ A++++ + ++G ++G V L
Sbjct: 363 IVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
KG LP++ T+N LI YC+ +D+A+ + + M G++ + +TY++++ GLC
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
+ +D ++ +++ + +G I YN ++ L + + EAL+ L+++ L P V
Sbjct: 483 KPEDVMETFKMIME--KGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVS 540
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEM 402
I GFC +G++++A + F +M ++ + V Y+ +I+A+ ++ + A +L EM
Sbjct: 541 FGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEM 600
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P + T+ ++ G C+ GNV + + ++ I G +P + +I LC +
Sbjct: 601 GDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFL---LKEIEIGFVPSLTTFGRVINCLCVQ 657
Query: 463 GGFQSASMLLVQMVGKGILPD 483
A ++ MV G++P+
Sbjct: 658 HRVHEAVGIVHLMVRTGVVPE 678
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 189/410 (46%), Gaps = 28/410 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
PD+ + T+I G + I D + P + S I+ V DID A A
Sbjct: 291 PDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALAL 350
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++ + G++ Y L+KGL V +L++ M G+ P+ YN +I+ LC
Sbjct: 351 F-EEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLC 409
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A +L++ P+ TF+ LI YCK + NA+ +L+ +S G PDV+
Sbjct: 410 KMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVI 469
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L LC + D +E K + KGCLPN+ TYNILI
Sbjct: 470 TYNSILNGLCKAAKPEDVMETF-------------------KMIMEKGCLPNIITYNILI 510
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S C+ + ALD+ +++ G+ + V++ T+I G C+ G +D+ ++ + ME
Sbjct: 511 ESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRI 570
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
++ YN ++ + D A + +M + P + + I GFC GNV
Sbjct: 571 CH-TVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGY 629
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+ IE G VP++ + +I+ C + RV EA ++ M G +P A
Sbjct: 630 DFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEA 679
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 151/308 (49%), Gaps = 15/308 (4%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR GKV+ + M+ C P++ +YN +++ E G + A V+ MK +GI+ +
Sbjct: 87 GRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDV 146
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
T+ I+ C R L++L M +G + Y +V+ G Y EN Q EA E
Sbjct: 147 CTFTIRIKSFCRTKRPLAALRLLNNM--PSQGCELNAVVYCTVISGFYEENYQVEAYELF 204
Query: 332 KQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M +L FP + + C G++++ ++ +++++ G PN+ ++ I C++
Sbjct: 205 NKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRK 264
Query: 390 -------ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+V EA + +M G P T+NT++ G + G + A +++++
Sbjct: 265 GVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD---AKF 321
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL- 501
+G +P Y LI +C+ G A L + +GKG+ P + +N+L+ LSQQ L
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK 381
Query: 502 LLLLLNEM 509
L L+N+M
Sbjct: 382 ALQLMNDM 389
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 124/295 (42%), Gaps = 65/295 (22%)
Query: 255 ALDVFNDMKI-DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
AL +FN +K DG F+TY +I L G D ++L M R++ NS
Sbjct: 23 ALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEM---------RLNVDNS 73
Query: 314 VLYGLY--------RENQQDEALE----------------------------YLKQMEKL 337
+L G+Y R+ + EA++ Y Q K+
Sbjct: 74 LLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKV 133
Query: 338 F---------PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+ P +++I FC A R + M +G N V+Y +I + +
Sbjct: 134 YLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYE 193
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
E EA EL +M G P +TFN ++ LC++G++ KL+ + ++ G P
Sbjct: 194 ENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKN---GVCPN 250
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQ-------MVGKGILPDYLTWNSLLICLSQ 496
++ I+ LC KG + A+ +V+ MV KG+ PD T+N+++ S+
Sbjct: 251 LFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSK 305
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 206/405 (50%), Gaps = 25/405 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ + V+ D YTY L++GLC R + +L M R P+ V Y L+ + CK
Sbjct: 146 RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 205
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+A L+ +M + P+ VT+++++ C+E + +A+ L+ S+G P+ V+
Sbjct: 206 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 265
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
VL+ LC+ R DA E++ E G++G R G V+ L+++
Sbjct: 266 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 325
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ GC PN +YN L+ ++C+ +D A+ + M G + V+Y+TL+ LC G +D
Sbjct: 326 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 385
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+++L ++D +G + YN+V+ GL + + EALE L +M + L P + S
Sbjct: 386 VAVELLHQLKD--KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 443
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
G C + +EDA R F ++ + G PN V+Y+ +I C+ A +L M G+G
Sbjct: 444 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 503
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSG 450
+P ST+ ++ GL +G + A L++E RG+ R SL G
Sbjct: 504 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKG 548
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 207/436 (47%), Gaps = 43/436 (9%)
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A R+ + A G D Y ++ G C ++ +L+ M V+P++ YNTLI
Sbjct: 113 AEARRVLAACG--PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRG 167
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC G+ A +++ +M P+ VT++IL+ A CK A+ LL++ G PD
Sbjct: 168 LCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 227
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+VT V+ +C GRV DA+E FLK + GC PN +YNI
Sbjct: 228 IVTYNVVVNGICQEGRVDDAIE-------------------FLKNLPSYGCEPNTVSYNI 268
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++ C + A ++ +M G N VT++ LI LC G ++ L++L+ + K
Sbjct: 269 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI--PK 326
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
G YN +L+ ++ + D+A+ +L M +P V + + C G V+
Sbjct: 327 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 386
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A Q+ ++G P ++ Y+ +I + + +EA EL+ EM G P T++T+ +
Sbjct: 387 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 446
Query: 420 GLCRQGNVGTALKLVEEDMRGIGR----GSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
GLCR+ + E+ +R G+ G P + Y+ +I LC++ SA L M
Sbjct: 447 GLCREDRI-------EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 499
Query: 476 VGKGILPDYLTWNSLL 491
+G G +P+ T+ L+
Sbjct: 500 IGNGCMPNESTYTILI 515
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 193/387 (49%), Gaps = 30/387 (7%)
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEK 172
+P++ LI L +G+ AR +++ P+ + ++ ++ YC L A L+ +
Sbjct: 93 RPDAGTCAALIKKLSASGRTAEARRVLAACG-PDVMAYNAMVAGYCGAGQLDAARRLVAE 151
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
PD T ++ LC GR +A+ +L+E M R+ C
Sbjct: 152 ---MPVEPDAYTYNTLIRGLCGRGRTANALAVLDE-------------------MLRRRC 189
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+P+V TY IL+ + C+ A+ + ++M+ G + + VTY+ ++ G+C GR+DD ++
Sbjct: 190 VPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIE 249
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
L+ + G + YN VL GL + ++A E + +M + P V ++ I
Sbjct: 250 FLKNLPSY--GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISF 307
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G VE A +Q+ + G PN + Y+ L+HA+C+++++ +A + M G P
Sbjct: 308 LCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPD 367
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
++NT+L+ LCR G V A++L+ + +G P Y+ +I L + G + A
Sbjct: 368 IVSYNTLLTALCRSGEVDVAVELLHQLK---DKGCAPVLISYNTVIDGLTKAGKTKEALE 424
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQ 497
LL +MV KG+ PD +T++++ L ++
Sbjct: 425 LLNEMVSKGLQPDIITYSTIAAGLCRE 451
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 187/412 (45%), Gaps = 64/412 (15%)
Query: 9 PDESIFITVIRGL-GRARMIN---------------DVVKAT------------------ 34
PD + T+IRGL GR R N DVV T
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215
Query: 35 -DLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
D + TP + +N +++ + +E +D A F K + + G + + +Y I++KGLC
Sbjct: 216 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL-KNLPSYGCEPNTVSYNIVLKGLC 274
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
R D +L+ M +G PN V +N LI LC+ G V A ++ + + PN +
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+++ L+ A+CK++ + A+ L+ S G PD+V+ +L LC G V AVE+L
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH-- 392
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+++ KGC P + +YN +I + G AL++ N+M G+
Sbjct: 393 -----------------QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 435
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ +TY T+ GLC RI+D ++ ++D G + YN+++ GL + + A+
Sbjct: 436 PDIITYSTIAAGLCREDRIEDAIRAFGKVQDM--GIRPNTVLYNAIILGLCKRRETHSAI 493
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ M P ++ I G +G +++A+ D++ G V +I
Sbjct: 494 DLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 545
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 45/349 (12%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T +++ L + GR +A +L C P+V Y
Sbjct: 94 PDAGTCAALIKKLSASGRTAEARRVL------------------------AACGPDVMAY 129
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N +++ YC G LD+A + +M ++ ++ TY+TLIRGLC GR + L +L M
Sbjct: 130 NAMVAGYCGAGQLDAARRLVAEMPVEPDAY---TYNTLIRGLCGRGRTANALAVLDEM-- 184
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ + Y +L + + +A++ L +M + P V ++ + G C +G V
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 244
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+DA + G PN V Y+ ++ C ER +A ELM EM G P TFN +
Sbjct: 245 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 304
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+S LCR+G V AL+++E+ + G P S Y+PL+ A C++ A L MV
Sbjct: 305 ISFLCRKGLVEPALEVLEQIPK---YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361
Query: 478 KGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
+G PD +++N+LL L + E+ V ++H+L K+K C
Sbjct: 362 RGCYPDIVSYNTLLTALCRS---------GEVDVAVELLHQL--KDKGC 399
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PP+ F +I L R ++ ++ + + ++ TP+ +N +L K+ +D A A
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F M++ G D +Y L+ LC + V +LLH +K +G P + YNT+I L
Sbjct: 355 FL-DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K GK A L+++M +P+ +T+S + C+E+ + +A+ K G P+
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 473
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V ++ LC A+++ M GC+PN TY IL
Sbjct: 474 VLYNAIILGLCKRRETHSAIDL-------------------FAYMIGNGCMPNESTYTIL 514
Query: 243 ISSYCETGVLDSALDVFNDMKIDGI 267
I G++ A D+ +++ G+
Sbjct: 515 IEGLAYEGLIKEARDLLDELCSRGV 539
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+ GL R I D ++A V + P+ ++N+I+ L K +
Sbjct: 436 PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDL 495
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M+ +G ++ TY IL++GL + + LL + SRGV S+I I L
Sbjct: 496 FAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 553
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 216/465 (46%), Gaps = 39/465 (8%)
Query: 39 RFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV 97
+ ++ P+++ N +LD LVK+ D Y M+A G + TY L+ G C
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVY-GDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
F+L M + + P VIY LI LC ++ A S+ M PN T++ +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
+ YCK ++ AL L ++ G +P+VVT +++ LC ++ A
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR----------- 318
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
+FL +M G +PN+ YN LI YC+ G L AL + ++++ I + T
Sbjct: 319 --------KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y LI+GLC R+++ +LQ M+ K+G YN+++ G +E ++A+E Q
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMK--KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + + P + S I G+C G +E A + +M+ +G +P+VV Y LI + ++
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL----VEEDMRGIGRGSL- 446
+EA L KEM G P T + ++ GLC+ G + A+KL D G L
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 447 -----PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
P Y+ LI+ LC G AS M G+ PD T
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 224/482 (46%), Gaps = 43/482 (8%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCL 93
D+V+R +P++ + +++D ++ D +AF +M+ + Y IL++GLC
Sbjct: 183 DMVAR-GASPNVVTYGTLIDGCCRQG-DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+R+ + + M++ G+ PN YNT++ CK V +A L +M PN VT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F ILI CK + +V+A L SFG VP++ +++ C G + +A+ + E
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 210 EQGRLGKV-------KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ L V KG C L+EM++KG LPN TYN LI YC+ G ++
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A++V + M GI N +T+ TLI G C G+++ + + M +G + Y +
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM--VIKGLLPDVVAYTA 478
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF------- 364
++ G +++ EA K+M++ L P S I G C DG + DA + F
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538
Query: 365 ------DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+++ PN V+Y LI C + R+ +AS+ +M G P T ++
Sbjct: 539 TTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVII 598
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
G R ++ + L + ++ G +P S Y L K E G +SA + G
Sbjct: 599 QGHFRAMHLRDVMMLQADILK---MGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGI 655
Query: 479 GI 480
GI
Sbjct: 656 GI 657
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 205/457 (44%), Gaps = 45/457 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P I+ +IRGL I++ + M P+L +N+++D K + A
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++M+ G+ + T+ IL+ GLC T+ + K L M S GV PN +YN LI C
Sbjct: 286 Y-QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A SL S++E+ P+ T+SILI C + + A LL++ GF+P+ V
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ C G + A+E+ + E+G + GK++ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG LP+V Y LI + + G A + +M+ G+ N T LI GLC GRI
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
D +K+ +K G+ S + N+ D +L P V +
Sbjct: 525 SDAIKLFL----AKTGTDTTGS----------KTNELDRSL--------CSPNHVMYTAL 562
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C DG + A + F M G P+V +I + + +R+ L ++ G
Sbjct: 563 IQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+P +S + + G G + +AL+ ED+ GIG G
Sbjct: 623 IPNSSVYRVLAKGYEESGYLKSALR-CSEDLSGIGIG 658
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 176/394 (44%), Gaps = 30/394 (7%)
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L V V P N ++ L K G+ + DM PN VT+ LI C+
Sbjct: 146 LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR 205
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ + + A L ++ P VV T ++ LC R+ +A +
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF-------------- 251
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ M G LPN+ TYN ++ YC+ + AL+++ +M DG+ N VT+ LI
Sbjct: 252 -----RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC + K L ++ + G I YN ++ G + EAL ++EK +
Sbjct: 307 GLCKTDEMVSARKFL--IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P S+ I G C +E+A +M ++G +PN V Y+ LI YC+E + +A E
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+ +MT G P TF+T++ G C+ G + A+ L E + +G LP Y+ LI
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE---MVIKGLLPDVVAYTALID 481
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G + A L +M G+ P+ T + L+
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 198/449 (44%), Gaps = 63/449 (14%)
Query: 93 LTNRVGD-GFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTF 150
LT R + +L H + R + N +Y+ +IH L +AR LM D+ + +
Sbjct: 45 LTCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSR 104
Query: 151 SILICAYCKEENLVNAL-----------VLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
IC C N+++ L VL+ G V + + + +++L ++
Sbjct: 105 RSRIC--CSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACN 162
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
++ L + G + KV G +M +G PNV TY LI C G A +F
Sbjct: 163 MVLDGLVKKGRFDTMWKVYG------DMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M I V Y LIRGLC RI + + + M +S G + YN+++ G
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS--GMLPNLYTYNTMMDGYC 274
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +ALE ++M + L P V + I G C + A++ M G VPN+
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 378 IYDCLIHAYCQE-----------------------------------ERVREASELMKEM 402
+Y+CLI YC+ +R+ EA L++EM
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G+LP A T+NT++ G C++GN+ A+++ + +G P +S LI C+
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE---KGIEPNIITFSTLIDGYCKA 451
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G ++A L +MV KG+LPD + + +L+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 241/540 (44%), Gaps = 70/540 (12%)
Query: 11 ESIFITVIRGLGRA----RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
E + I RA R + +A+DL R P ++++N +LD L++E++ A
Sbjct: 33 EDALVAAIGAFARAGSADRALKTFYRASDLGCR---DPGVRVYNHLLDALLRENMVGAVV 89
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M +GV + YTY +L++ LC +RV K+L M +G P+ V + T++ +
Sbjct: 90 PVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGM 149
Query: 127 CKNGKVGRARSLMSDME----------------------------------EPNDVTFSI 152
CK G+V AR +++ +PN VT++
Sbjct: 150 CKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTT 209
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
++ A+CK L A +L + S G P+V+T T +++ G+V DA+ + ++G
Sbjct: 210 IVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEG 269
Query: 213 R----------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+G +KG F M+R LPN TY+ L+ + G LD A+
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 329
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ--LMEDSKEGSKGRISPYNSV 314
++N+MK G N V Y +I LC D ++ LM++ + +N++
Sbjct: 330 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT----VTFNTL 385
Query: 315 LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGG 372
+ L + AL M + DR+ L G +GN +DA +M+ G
Sbjct: 386 IGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGF 445
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
++V Y+ +I+ CQ + A L+ M G P A TFN ++ C++G V A
Sbjct: 446 ELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAAC 505
Query: 433 LV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ + + R + Y+ LI LC +G +A + L++M+ +GI P+ TWN L+
Sbjct: 506 LLGQMNAVNCPRNVVA----YTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 25/278 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
P+ + + T++ G A ++ + + + P++ ++ +++DVL K+ + D A +
Sbjct: 307 PNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESL 366
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM+ + T+ L+ LC RVG + H M+ G PN YN L+H L
Sbjct: 367 I-DKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLF 425
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A +++ +M E + VT++ +I C+ +A++LL + G PD
Sbjct: 426 REGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAF 485
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C + GKV L +M C NV Y ILI
Sbjct: 486 TFNAIIHAYC-------------------KEGKVSIAACLLGQMNAVNCPRNVVAYTILI 526
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
S C G L +A+ M +GI N T++ L+R +
Sbjct: 527 SELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAI 564
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 215/447 (48%), Gaps = 29/447 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G + T+ L+ G R GD +LL M +R ++PN V YN L+ LCK +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 132 VGRARSLMSDM------EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
A L+ DM P+ VT+S L+ YCK + + LL++ S G PD +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMER 229
TKV+ LC R+ +A+E+LEE G + G CR L++M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G +V TYN L+ C+ G L A + MK G + + V Y + + GLC G++ D
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSL 346
++L+ M DS + YN++L GL + + D ALE ++QM + V S
Sbjct: 241 AHQVLEQMRDSHHDPN--VVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C G ++A+ + M G P+VV Y L++ C+ ++ EA E ++EM G
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P A T+ +++ GLC G + A ++VEE G G P Y+ LI LC+ G
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR 418
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A +M +G PD +++++++
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIV 445
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 191/364 (52%), Gaps = 31/364 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD ++ V+ L ++ + + ++ + + R P+L FN+++ +E ++++A +
Sbjct: 115 PDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+KM ASGV+ D TY LM GLC R+ + +LL MK+ G P+ V Y++ ++ LC
Sbjct: 175 L-QKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDV 182
K+GKV A ++ M + PN VT++ ++ CK + AL ++E+ + S G +V
Sbjct: 234 KSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V + V++ LC +GR +A ++E M R GC P+V TY+ L
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEA-------------------MARAGCRPDVVTYSSL 334
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
++ C+ G ++ A++ +M ++G N VTY +L+ GLCS GR+ + ++++ M
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGG 394
Query: 303 GSKG---RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
G +S YN+++ GL + + D+AL++ ++M + P V S + G G
Sbjct: 395 GGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454
Query: 358 EDAK 361
A+
Sbjct: 455 LQAE 458
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 216/460 (46%), Gaps = 67/460 (14%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PP+ F ++ G + D + + ++ ++ P++ +N +L+ L K E A
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 67 FYRKKMMASGVQGDDY-TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
R + G D TY+ L+ G C +V + +LL + SRG++P++++Y ++ S
Sbjct: 67 LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+ ++G A L+ +M P +TF+ LI C+E+NL A LL+K + G D
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
VVT +++ LC GR+ +A ++LE G + GKV + L+
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLIRGLCSG 284
+M PNV TYN ++ C++G +D+AL++ M DG N V Y T++ GLC
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKL 306
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
GR + +++ M ++ G + + Y+S++ GL + + +EA+E +++M E P AV
Sbjct: 307 GRTQEARSVMEAM--ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAV 364
Query: 343 ------------------DRSLK----------------------ILGFCVDGNVEDAKR 362
+R ++ I G C G ++DA +
Sbjct: 365 TYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALK 424
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
F +M +G P+ V Y ++ + R +A ++ E+
Sbjct: 425 FFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 226/483 (46%), Gaps = 59/483 (12%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ + + V D YTY L++ LC RV D LL M RG +PN V Y L+ ++C+
Sbjct: 131 RRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCR 190
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N +A +++ +M PN VT++++I C+E + +A LL + S+GF PD V+
Sbjct: 191 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVS 250
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T +L+ LC+ R D E+ E E+ R G V+ + L++M
Sbjct: 251 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT 310
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC N NI+I+S C+ G +D A + NDM G + + ++Y T+++GLC R D
Sbjct: 311 EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWD 370
Query: 289 DGLKILQLM---------------------------------EDSKEGSKGRISPYNSVL 315
D ++L M + S+ G + YN+++
Sbjct: 371 DAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALV 430
Query: 316 YGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
G + D ALE + M P + + + G C ++ A +M+ PN
Sbjct: 431 NGFCVQGHIDSALELFRSM-PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPN 489
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VV ++ L+ +CQ+ + EA EL+++M HG P T+NT+L G+ + + AL+L
Sbjct: 490 VVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALEL-- 547
Query: 436 EDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ G + +G P +S +I L ++ + A L + G+ P + +N +L+ L
Sbjct: 548 --LHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGL 605
Query: 495 SQQ 497
++
Sbjct: 606 CKR 608
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 238/541 (43%), Gaps = 67/541 (12%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-ID 62
S+ PD + +IR L + D + D + R P++ + +L+ + + +
Sbjct: 136 SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFE 195
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A A +M A G + TY +++ G+C RV D +LL+ + S G +P++V Y TL
Sbjct: 196 QAMAVL-DEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTL 254
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ LC + + L ++M E PN+VTF +LI +C+ + A+ +LE+ G
Sbjct: 255 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGC 314
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR--------- 222
+ V+ +C GRV DA ++L + G G +KG CR
Sbjct: 315 ATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKE 374
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L EM R C PN T+N I C+ G+++ A+ + M G + VTY+ L+ G C
Sbjct: 375 LLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFC 434
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
G ID L++ + M K Y ++L GL + D A E + +M + P
Sbjct: 435 VQGHIDSALELFRSMP-----CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPN 489
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY---------DC-------LIH 384
V ++ + FC G +E+A +QM+E G PN++ Y DC L+H
Sbjct: 490 VVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLH 549
Query: 385 AYC-------------------QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+E+R+ EA +L + G P A +N +L GLC++
Sbjct: 550 GLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRC 609
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ A+ + G +P Y LI+ L +G + A LL + +G+L L
Sbjct: 610 EIDNAIDFFA---YMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNL 666
Query: 486 T 486
T
Sbjct: 667 T 667
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 194/439 (44%), Gaps = 60/439 (13%)
Query: 55 VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
++ +ED+ A + G D Y L++ LC R D ++L + G
Sbjct: 50 LIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPV 109
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSF 174
+ YNTL+ C+ G + AR L+ M
Sbjct: 110 DVFAYNTLVAGYCRYGHLDAARRLIGSMP------------------------------- 138
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
PD T T ++ +LC GRV DA+ +L++ M R+GC P
Sbjct: 139 ---VAPDAYTYTPLIRVLCDRGRVADALSLLDD-------------------MLRRGCQP 176
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV TY +L+ + C + A+ V ++M+ G + N VTY+ +I G+C GR+DD ++L
Sbjct: 177 NVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELL 236
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
+ G + Y ++L GL + D+ E +M + P V + I FC
Sbjct: 237 NRL--PSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFC 294
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G VE A + +QM E G N + + +I++ C++ RV +A +L+ +M +G P
Sbjct: 295 RGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTI 354
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
++ TVL GLCR A +L+ E +R P ++ I LC+KG + A ML+
Sbjct: 355 SYTTVLKGLCRAERWDDAKELLNEMVRN---NCPPNEVTFNTFICILCQKGLIEQAIMLI 411
Query: 473 VQMVGKGILPDYLTWNSLL 491
QM G +T+N+L+
Sbjct: 412 EQMSEHGCTVGVVTYNALV 430
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 172/370 (46%), Gaps = 27/370 (7%)
Query: 161 ENLVNALVLLEKSFSF-GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
E+L A+ L+E+S S G PDV TK++ LC GR DA +L + G
Sbjct: 54 EDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA 113
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
R G + R + M P+ TY LI C+ G + AL + +DM
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDML 170
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G N VTY L+ +C + + +L M +G I YN ++ G+ RE +
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMR--AKGCTPNIVTYNVIINGMCREGR 228
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
D+A E L ++ P V + + G C +D + F +M+E+ +PN V +D
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI +C+ V A +++++MT HG + N V++ +C+QG V A KL+ DM
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLN-DMGSY 347
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
G P + Y+ ++K LC + A LL +MV P+ +T+N+ + L Q+
Sbjct: 348 GCN--PDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIE 405
Query: 502 LLLLLNEMVS 511
++L E +S
Sbjct: 406 QAIMLIEQMS 415
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 215/447 (48%), Gaps = 29/447 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G + T+ L+ G R GD +LL M +RG++PN V YN L+ LCK +
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 132 VGRARSLMSDM------EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
A L+ DM P+ VT+S L+ YCK + + LL++ S G PD +
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMER 229
TKV+ LC R+ +A+E+LEE G + G CR L+ M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G +V TYN L+ C+ G L A + MK G + + V Y + + GLC G++ +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSL 346
++L+ M DS + YN++L GL + + D ALE ++QM + V S
Sbjct: 241 AHQVLEQMRDSDHDPN--VVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYST 298
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C G ++A+ + M G P+VV Y L++ C+ ++ EA E ++EM G
Sbjct: 299 VVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P A T+ +++ GLC G + A ++VEE G G P Y+ LI LC+ G
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGR 418
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A +M +G PD +++++++
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIV 445
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 189/363 (52%), Gaps = 31/363 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD ++ V+ L ++ + + ++ + + R P+L FN+++ +E ++++A +
Sbjct: 115 PDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSL 174
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M ASGV+ D TY LM GLC R+ + +LL MK+ G P+ V Y++ ++ LC
Sbjct: 175 L-QTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLC 233
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDV 182
K+GKV A ++ M + PN VT++ ++ CK + AL ++E+ + S G +V
Sbjct: 234 KSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNV 293
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V + V++ LC +GR +A ++E M R GC P+V TY+ L
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEA-------------------MARAGCRPDVVTYSSL 334
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM---ED 299
++ C+ G ++ A++ +M ++G N VTY +L+ GLCS GR+ + ++++ M
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGG 394
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ +S YN+++ GL + + D+AL++ ++M + P V S + G G
Sbjct: 395 GGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRA 454
Query: 358 EDA 360
A
Sbjct: 455 LQA 457
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 243/506 (48%), Gaps = 29/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD +F T I + + + VK + + P++ FN+++D L + D A F
Sbjct: 247 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 306
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++KM+ G++ TY+IL+KGL R+GD + +L M +G PN ++YN LI S
Sbjct: 307 -KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 365
Query: 128 KNGKVGRA---RSLM-SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A + LM S T++ LI YCK NA LL++ S GF +
Sbjct: 366 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 425
Query: 184 TITKVLELLCSVGRVMDAVEILEE------SGEQGRLGK-VKGGCRFLKEME-------- 228
+ T V+ LLCS A+ + E S G L + G C+ K +
Sbjct: 426 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 485
Query: 229 -RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG + + T N L+ CE G LD A + ++ G + V+Y+TLI G C ++
Sbjct: 486 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 545
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D+ L M K G K Y+ ++ GL+ N+ +EA+++ ++ + P S
Sbjct: 546 DEAFMFLDEM--VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 603
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C E+ + FD+M+ + PN V+Y+ LI AYC+ R+ A EL ++M
Sbjct: 604 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 663
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P ++T+ +++ G+ V A KL+ E+MR G P HY+ LI + G
Sbjct: 664 GISPNSATYTSLIKGMSIISRVEEA-KLLFEEMR--MEGLEPNVFHYTALIDGYGKLGQM 720
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
LL +M K + P+ +T+ ++
Sbjct: 721 VKVECLLREMHSKNVHPNKITYTVMI 746
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 211/507 (41%), Gaps = 63/507 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
M PS N +L LV+ + + + ++ GV D Y + + C +V +
Sbjct: 211 MFPSKTTCNILLTSLVRAN-EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 269
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAY 157
KL M+ GV PN V +NT+I L G+ A M EP +T+SIL+
Sbjct: 270 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 329
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
+ + + +A +L++ GF P+V+ +++ G + A+EI + +G
Sbjct: 330 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 389
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ G+ R LKEM G N ++ +I C + DSAL +
Sbjct: 390 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 449
Query: 262 MKIDGIS-------------------------W------NFV----TYDTLIRGLCSGGR 286
M + +S W FV T + L+ GLC G+
Sbjct: 450 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 509
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+D+ +I + E G YN+++ G + + DEA +L +M K L P
Sbjct: 510 LDEAFRIQK--EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 567
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ I G VE+A + +D G +P+V Y +I C+ ER E E EM
Sbjct: 568 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 627
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P +N ++ CR G + AL+L EDM+ +G P S Y+ LIK +
Sbjct: 628 KNVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMK--HKGISPNSATYTSLIKGMSIISR 684
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +L +M +G+ P+ + +L+
Sbjct: 685 VEEAKLLFEEMRMEGLEPNVFHYTALI 711
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 184/397 (46%), Gaps = 32/397 (8%)
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
+GV P+ ++ T I++ CK GKV A L S MEE PN VTF+ +I
Sbjct: 243 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 302
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A + EK G P ++T + +++ L R+ DA +L K
Sbjct: 303 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL-------------------K 343
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +KG PNV YN LI S+ E G L+ A+++ + M G+S TY+TLI+G C G
Sbjct: 344 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 403
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+ D+ ++L+ M G + SV+ L D AL ++ +M + P
Sbjct: 404 QADNAERLLKEMLSI--GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 461
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I G C G A + Q + +G V + + L+H C+ ++ EA + KE+
Sbjct: 462 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 521
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G G + ++NT++SG C + + A ++E ++ RG P + YS LI L
Sbjct: 522 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK---RGLKPDNYTYSILICGLFNMN 578
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
+ A G+LPD T++ ++ C +++T
Sbjct: 579 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 615
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ D YTY++++ G C R +G + M S+ V+PN+V+YN LI + C++G++
Sbjct: 593 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 652
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L DM+ PN T++ LI + A +L E+ G P+V T +++
Sbjct: 653 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 712
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGK-VKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G+LG+ VK C L+EM K PN TY ++I Y
Sbjct: 713 -------------------GYGKLGQMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARD 752
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
G + A + N+M+ GI + +TY I G G + + K
Sbjct: 753 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 215/465 (46%), Gaps = 39/465 (8%)
Query: 39 RFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV 97
+ ++ P+++ N +LD LVK+ D Y M+A G + TY L+ G C
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVY-GDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
F+L M + + P VIY LI LC ++ A S+ M PN T++ +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
+ YCK ++ AL L + G +P+VVT +++ LC ++ A
Sbjct: 270 MDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR----------- 318
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
+FL +M G +PN+ YN LI YC+ G L AL + ++++ I + T
Sbjct: 319 --------KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y LI+GLC R+++ +LQ M+ K+G YN+++ G +E ++A+E Q
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMK--KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + + P + S I G+C G +E A + +M+ +G +P+VV Y LI + ++
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL----VEEDMRGIGRGSL- 446
+EA L KEM G P T + ++ GLC+ G + A+KL D G L
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELD 548
Query: 447 -----PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
P Y+ LI+ LC G AS M G+ PD T
Sbjct: 549 RSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 205/466 (43%), Gaps = 44/466 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P I+ +IRGL I++ + M P+L +N+++D K + A
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +M+ G+ + T+ IL+ GLC T+ + K L M S GV PN +YN LI C
Sbjct: 286 Y-XEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A SL S++E+ P+ T+SILI C + + A LL++ GF+P+ V
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ C G + A+E+ + E+G + GK++ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG LP+V Y LI + + G A + +M+ G+ N T LI GLC GRI
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
D +K+ +K G+ S + N+ D +L P V +
Sbjct: 525 SDAIKLFL----AKTGTDTTGS----------KTNELDRSL--------CSPNHVMYTAL 562
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C DG + A + F M G P+V +I + + +R+ L ++ G
Sbjct: 563 IQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGI 622
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+P +S + + G G + +AL E ++ + R + G Y+
Sbjct: 623 IPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYT 668
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 176/394 (44%), Gaps = 30/394 (7%)
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L V V P N ++ L K G+ + DM PN VT+ LI C+
Sbjct: 146 LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR 205
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ + + A L ++ P VV T ++ LC R+ +A +
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF-------------- 251
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ M G LPN+ TYN ++ YC+ + AL+++ +M DG+ N VT+ LI
Sbjct: 252 -----RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILID 306
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC + K L ++ + G I YN ++ G + EAL ++EK +
Sbjct: 307 GLCKTDEMVSARKFL--IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P S+ I G C +E+A +M ++G +PN V Y+ LI YC+E + +A E
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+ +MT G P TF+T++ G C+ G + A+ L E + +G LP Y+ LI
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE---MVIKGLLPDVVAYTALID 481
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G + A L +M G+ P+ T + L+
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 197/449 (43%), Gaps = 63/449 (14%)
Query: 93 LTNRVGD-GFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTF 150
LT R + +L H + R + N +Y+ +IH L +AR LM D+ + +
Sbjct: 45 LTCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSR 104
Query: 151 SILICAYCKEENLVNAL-----------VLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
IC C N+++ L VL+ G V + + + +++L ++
Sbjct: 105 RSRIC--CSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACN 162
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
++ L + G + KV G +M +G PNV TY LI C G A +F
Sbjct: 163 MVLDGLVKKGRFDTMWKVYG------DMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M I V Y LIRGLC RI + + + M +S G + YN+++ G
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS--GMLPNLYTYNTMMDGYC 274
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +ALE +M + L P V + I G C + A++ M G VPN+
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 378 IYDCLIHAYCQE-----------------------------------ERVREASELMKEM 402
+Y+CLI YC+ +R+ EA L++EM
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G+LP A T+NT++ G C++GN+ A+++ + +G P +S LI C+
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE---KGIEPNIITFSTLIDGYCKA 451
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G ++A L +MV KG+LPD + + +L+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 240/518 (46%), Gaps = 63/518 (12%)
Query: 37 VSRFNMTPSLKIFNSILDVLVK----EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+ R N P+L N++++ LV+ I LAR K + GV + ++ IL+ G C
Sbjct: 166 MKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVL-KDSIKLGVVPNTNSFNILIYGYC 224
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
L ++V D ++ M G P++V YNT++ +L K + AR L+ DM+ PN
Sbjct: 225 LESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKH 284
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+++L+C YC+ L A ++E +P V T ++ C+ G++ +A I +E
Sbjct: 285 TYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM 344
Query: 209 GEQGRLGKVK------GGC----------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+ L V GC ++EM++KG N TYNI++ C+ G +
Sbjct: 345 EKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNM 404
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED------------- 299
A + M+ +G+S + VTY+TLI C G++ +++ M
Sbjct: 405 TEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTI 464
Query: 300 --------------------SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KL 337
SK G Y ++ G +++ + D AL +M+ ++
Sbjct: 465 LHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQI 524
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + + I G C V+ A ++M+E G VP+ Y+ +IH +C E V +A +
Sbjct: 525 MPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQ 584
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
EM + + P T N +L GLCR+G + ALKL + +G Y+ +I
Sbjct: 585 FHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFN---TLVSKGKDIDVVTYNTIIS 641
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
+LC++G F++A LL +M K + PD T+ ++ L+
Sbjct: 642 SLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALT 679
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 130/511 (25%), Positives = 251/511 (49%), Gaps = 51/511 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P++ + ++ G R ++ + K ++++R N+ P++ +N +++ D + AF
Sbjct: 281 PNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCN-DGKIDEAFR 339
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R +M V D TY L+ G + + L+ M +GVK N+V YN ++ +C
Sbjct: 340 IRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMC 399
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A + + MEE P+ VT++ LI AYCK + A ++++ S G D
Sbjct: 400 KKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTW 459
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T+ +L LC ++ +A +L + ++G + L E+ +Y ILI
Sbjct: 460 TLNTILHCLCVEKKLDEAYNLLCSASKRGYI---------LDEV----------SYGILI 500
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKE 302
Y + D AL+++++MK I + +TY+++I GLC ++D + K+ +++E+
Sbjct: 501 LGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN--- 557
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDA 360
G + YN +++G E ++A ++ +M E LF P ++ + G C +G +E A
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKA 617
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F+ ++ +G +VV Y+ +I + C+E + A +L+ EM P T+ +++
Sbjct: 618 LKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAA 677
Query: 421 LCRQGNVGTA----LKLVE------EDMR-GIGRGSLPG--SGH-------YSPLIKALC 460
L G + A LK+VE ++++ G G+ L S H YS I LC
Sbjct: 678 LTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELC 737
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ ++ A L V++ +G+ + T+ +L+
Sbjct: 738 NQHKYKDAMHLFVEVTKEGVALNKYTYLNLM 768
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 202/430 (46%), Gaps = 36/430 (8%)
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCK---NGKVGRARSLMSDMEE----PNDVTFSILI 154
++ + MK +PN + NTL++SL + + + AR ++ D + PN +F+ILI
Sbjct: 161 QIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILI 220
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
YC E + +AL + K FG VPD V+ +L+ L + +A ++
Sbjct: 221 YGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDL---------- 270
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
L +M+ KG PN TYN+L+ YC G+L A V M + + TY
Sbjct: 271 ---------LLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTY 321
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ L+ G C+ G+ID+ +I ME K + YN+++ G + E +++M
Sbjct: 322 NMLVNGFCNDGKIDEAFRIRDEME--KMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379
Query: 335 EK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+K + AV ++ + C GN+ +A D+M E G P+ V Y+ LI AYC+ ++
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A +M EMT G T NT+L LC + + A L+ RG + Y
Sbjct: 440 GKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLL---CSASKRGYILDEVSY 496
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMV 510
LI + A L +M + I+P +T+NS++ +C S++ + LNEM+
Sbjct: 497 GILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQ-AIDKLNEML 555
Query: 511 SFVMVVHELS 520
+V E +
Sbjct: 556 ENGLVPDETT 565
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ + D I AY Q ++ A+++ +M Y P T NT+++ L R + + L
Sbjct: 138 PSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLA 197
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ I G +P + ++ LI C + + A + +M G +PD +++N++L
Sbjct: 198 RQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDA 257
Query: 494 L 494
L
Sbjct: 258 L 258
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 243/506 (48%), Gaps = 29/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD +F T I + + + VK + + P++ FN+++D L + D A F
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++KM+ G++ TY+IL+KGL R+GD + +L M +G PN ++YN LI S
Sbjct: 318 -KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 128 KNGKVGRA---RSLM-SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A + LM S T++ LI YCK NA LL++ S GF +
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 184 TITKVLELLCSVGRVMDAVEILEE------SGEQGRLGK-VKGGCRFLKEME-------- 228
+ T V+ LLCS A+ + E S G L + G C+ K +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 229 -RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG + + T N L+ CE G LD A + ++ G + V+Y+TLI G C ++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D+ L M K G K Y+ ++ GL+ N+ +EA+++ ++ + P S
Sbjct: 557 DEAFMFLDEM--VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 614
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C E+ + FD+M+ + PN V+Y+ LI AYC+ R+ A EL ++M
Sbjct: 615 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 674
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P ++T+ +++ G+ V A KL+ E+MR G P HY+ LI + G
Sbjct: 675 GISPNSATYTSLIKGMSIISRVEEA-KLLFEEMR--MEGLEPNVFHYTALIDGYGKLGQM 731
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
LL +M K + P+ +T+ ++
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMI 757
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 211/507 (41%), Gaps = 63/507 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
M PS N +L LV+ + + + ++ GV D Y + + C +V +
Sbjct: 222 MFPSKTTCNILLTSLVRAN-EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 280
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAY 157
KL M+ GV PN V +NT+I L G+ A M EP +T+SIL+
Sbjct: 281 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 340
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
+ + + +A +L++ GF P+V+ +++ G + A+EI + +G
Sbjct: 341 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 400
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ G+ R LKEM G N ++ +I C + DSAL +
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 262 MKIDGIS-------------------------W------NFV----TYDTLIRGLCSGGR 286
M + +S W FV T + L+ GLC G+
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+D+ +I + E G YN+++ G + + DEA +L +M K L P
Sbjct: 521 LDEAFRIQK--EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ I G VE+A + +D G +P+V Y +I C+ ER E E EM
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 638
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P +N ++ CR G + AL+L EDM+ +G P S Y+ LIK +
Sbjct: 639 KNVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMK--HKGISPNSATYTSLIKGMSIISR 695
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +L +M +G+ P+ + +L+
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALI 722
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 184/397 (46%), Gaps = 32/397 (8%)
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
+GV P+ ++ T I++ CK GKV A L S MEE PN VTF+ +I
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A + EK G P ++T + +++ L R+ DA +L K
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL-------------------K 354
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +KG PNV YN LI S+ E G L+ A+++ + M G+S TY+TLI+G C G
Sbjct: 355 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 414
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+ D+ ++L+ M G + SV+ L D AL ++ +M + P
Sbjct: 415 QADNAERLLKEMLSI--GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 472
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I G C G A + Q + +G V + + L+H C+ ++ EA + KE+
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 532
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G G + ++NT++SG C + + A ++E ++ RG P + YS LI L
Sbjct: 533 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK---RGLKPDNYTYSILICGLFNMN 589
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
+ A G+LPD T++ ++ C +++T
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 626
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ D YTY++++ G C R +G + M S+ V+PN+V+YN LI + C++G++
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L DM+ PN T++ LI + A +L E+ G P+V T +++
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGK-VKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G+LG+ VK C L+EM K PN TY ++I Y
Sbjct: 724 -------------------GYGKLGQMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARD 763
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
G + A + N+M+ GI + +TY I G G + + K
Sbjct: 764 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 212/429 (49%), Gaps = 31/429 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
++ F ++IR A + + +K + ++PS+ FNS++ +L+K ++A+ Y
Sbjct: 147 EDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVY 206
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV D TY +L++G C + V +GF+ M+S + V YNTL+ LC+
Sbjct: 207 DEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCR 266
Query: 129 NGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
GKV AR+L++ M + PN VT++ LI YC ++ + ALV+LE+ S G P++
Sbjct: 267 AGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNM 326
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T +++ LC ++ ++LE G G P+ T+N +
Sbjct: 327 ITYNTLVKGLCEAHKLDKMKDVLERMKSDG------------------GFSPDTFTFNTI 368
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QLMED-- 299
I +C G LD AL VF MK I + +Y TLIR LC G D ++ +L E
Sbjct: 369 IHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEI 428
Query: 300 --SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFPRAVDRSLKILGFCVDGN 356
SK GSK + YN + L + +A ++Q M++ + I+G C +G
Sbjct: 429 LLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGA 488
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
E M+ +P++ IYD LI + Q+++ A E +++M Y P ST+++
Sbjct: 489 YESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHS 548
Query: 417 VLSGLCRQG 425
VL+ L +G
Sbjct: 549 VLAKLLEKG 557
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 241/526 (45%), Gaps = 62/526 (11%)
Query: 16 TVIRGLGRARMINDVVKATDLVSR-----FNMTPSLKIFNSILDVLVKE-DIDLARAFYR 69
TV+R L R+I D KA F+ TP + + +L++L +E ++++AR F
Sbjct: 80 TVLRTL---RLIKDPSKALRFFKWTQQKGFSHTP--ESYFIMLEILGRERNLNVARNFLF 134
Query: 70 --KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+K V+ +D + L++ + KL MKS V P+ V +N+L+ L
Sbjct: 135 SIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILL 194
Query: 128 KNGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G+ A+ + +M P+ T+++LI +CK + + SF DV
Sbjct: 195 KRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADV 254
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ LC G+V A ++ G++ C +G PNV TY L
Sbjct: 255 VTYNTLVDGLCRAGKVRIARNLVNGMGKK---------C--------EGLNPNVVTYTTL 297
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I YC ++ AL V +M G+ N +TY+TL++GLC ++D +L+ M+
Sbjct: 298 IRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMK---- 353
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
S G SP +N++++ DEAL+ + M+K A S L C G+
Sbjct: 354 -SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGD 412
Query: 357 VEDAKRCFDQMIEE-------GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+ A++ FD++ E+ G P Y+ + + C+ + ++A +++++ G
Sbjct: 413 YDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQD 472
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
S + TV+ G C++G + +L+ M + R LP Y LI +K A
Sbjct: 473 PQS-YTTVIMGHCKEGAYESGYELL---MWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAK 528
Query: 470 MLLVQMVGKGILPDYLTWNSLLICL-----SQQTTWLLLLLLNEMV 510
L +M+ P TW+S+L L + +++ +++++L + V
Sbjct: 529 ETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNV 574
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 153/337 (45%), Gaps = 26/337 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +IRG + M+++ + + FN + +N+++D L + + +AR
Sbjct: 217 PDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNL 276
Query: 68 YR---KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
KK G+ + TY L++G C+ V + +L M SRG+KPN + YNTL+
Sbjct: 277 VNGMGKK--CEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVK 334
Query: 125 SLCKNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC+ K+ + + ++ M+ P+ TF+ +I +C NL AL + E F
Sbjct: 335 GLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIP 394
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
D + + ++ LC G A ++ +E E+ L + + G P +Y
Sbjct: 395 ADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEIL------------LSKFGSKPLAASY 442
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N + S CE G A V + G + + +Y T+I G C G + G ++L M
Sbjct: 443 NPIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWM-- 499
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
+ I Y+ ++ G ++++ A E L++M K
Sbjct: 500 LRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLK 536
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 212/449 (47%), Gaps = 31/449 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K DIDLA
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M A+ ++ D + ++ LC V D L M+++G++PN V Y++LI LC
Sbjct: 173 LNK-MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE V A L + PD+
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C RL K K F M K C P++DTYN LI
Sbjct: 292 TYNSLINGFCM----------------HDRLDKAKQMFEF---MVSKDCFPDLDTYNTLI 332
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C++ ++ ++F +M G+ + VTY TLI+GL G D+ K+ + M +G
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM--VSDG 390
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I Y+ +L GL + ++ALE M+K + + I G C G V+D
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNVV Y+ +I C + ++EA L+K+M G LP + T+NT++
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 422 CRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDASTIG 539
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 33/430 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L++ ME E + V F+ +I + CK ++ +AL L ++ + G P+VVT +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LCS GR DA ++L + E+ + GK + +M ++
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TYN LI+ +C LD A +F M + TY+TLI+G C R++DG
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ + M S G G Y +++ GL+ + D A + KQM + + P + S+ +
Sbjct: 345 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A FD M + ++ IY +I C+ +V + +L ++ G
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A LK ++ED G LP SG Y+ LI+A G
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKED------GPLPDSGTYNTLIRAHLRDGDK 516
Query: 466 QSASMLLVQM 475
+++ L+ +M
Sbjct: 517 AASAELIREM 526
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 213/462 (46%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + DL + +KM G+ + YTY IL+ C +++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISL-GEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M G +P+ V ++L++ C ++ A +L+ M E P+ +TF+ LI
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ G P++VT V+ LC G + A +L +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK----------- 175
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME +V +N +I S C+ +D AL++F +M+ GI N VTY +LI
Sbjct: 176 --------MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LCS GR D ++L M + K + +N+++ +E + EA EKL
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPN--LVTFNALIDAFVKEGKFVEA-------EKLH 278
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ I GFC+ ++ AK+ F+ M+ + P++ Y+ LI +C+
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV + +EL +EM+ G + T+ T++ GL G+ A K+ ++ + G P
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDI 395
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC G + A + M I D + +++
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP++ +N L+S+ + D + + M+ GIS N TY+ LI C
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC---------- 56
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILG 350
R +Q AL L +M KL P V S + G
Sbjct: 57 ---------------------------RRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+C + DA DQM+E G P+ + + LIH + EA L+ M G P
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ V++GLC++G++ A L+ + + ++ +I +LC+ A
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALN 206
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
L +M KGI P+ +T++SL+ CL W
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M++ +P++ ++ L+ A + ++ L ++M G T+N +++ CR+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L+ + M+ G P S L+ C A L+ QMV G PD +T
Sbjct: 61 ISLALALLGKMMK---LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 487 WNSLL 491
+ +L+
Sbjct: 118 FTTLI 122
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 203/424 (47%), Gaps = 61/424 (14%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ G+ PN+ N LI+ C V S+++ + +P +TF+ LI CK
Sbjct: 117 MELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGE 176
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
AL L + + G PDV T T ++ LC +G A ++++ GE
Sbjct: 177 FAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGE------------ 224
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
GC P+V TY+ LI S C+ +++ ALD+F+ MK GIS V+Y +LI+GLC
Sbjct: 225 -------VGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLC 277
Query: 283 SGGRIDDG------LKILQLMED-----------SKEGS----------------KGRIS 309
S R + + L +M D KEG+ + +
Sbjct: 278 SFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVI 337
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YNS+++G + + EA + M P S+ I G+C+ +++AK+ F++M
Sbjct: 338 TYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEM 397
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
I +G PN V Y LIHA+CQ ++REA EL K+M +GYLP T++ +L G C+QG +
Sbjct: 398 IHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYL 457
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
G A +L M+G P Y+ LI ++C+ G A L ++ G+ PD +
Sbjct: 458 GKAFRLFRA-MQGTYLK--PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIY 514
Query: 488 NSLL 491
+++
Sbjct: 515 TTII 518
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 208/440 (47%), Gaps = 28/440 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T+I GL +A ++ D + P + + +I++ L K A A
Sbjct: 159 PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGL 218
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM G Q D TY+ L+ LC V + + MK++G+ P V Y +LI LC
Sbjct: 219 IKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCS 278
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A +++++M P+ VTFS+LI +CKE N++ A +L+ G P+V+T
Sbjct: 279 FSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+M + E E +L V M +GC P+V +Y+ILI+
Sbjct: 339 YNS----------LMHGYSLQMEVVEARKLFDV---------MITRGCKPDVFSYSILIN 379
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC +D A +FN+M G++ N V+Y TLI C G++ + ++ + M + G
Sbjct: 380 GYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTN--GY 437
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ +L G ++ +A + M+ + P V ++ I C GN+ A++
Sbjct: 438 LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARK 497
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ G P+V IY +I+ C+E + EA E ++M G P ++N ++ G
Sbjct: 498 LFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFL 557
Query: 423 RQGNVGTALKLVEEDMRGIG 442
+ + A++L+ E MR G
Sbjct: 558 QHKDESRAVQLIGE-MRDKG 576
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 135/513 (26%), Positives = 225/513 (43%), Gaps = 44/513 (8%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMIND-VVKATDLVSRFNMTPSLKIFNSILDVL-VK 58
H + P I F ++ + R R D V+ + + ++P+ N +++ +
Sbjct: 80 HMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLM 139
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+ +DL + K++ G+Q T+ L+ GLC +L M +RG +P+
Sbjct: 140 QHVDLGFSVL-AKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYT 198
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
Y T+I+ LCK G+ A L+ M E P+ VT+S LI + CK+ + AL +
Sbjct: 199 YTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMK 258
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG-------------------EQGRLG 215
+ G P VV+ T +++ LCS R +A +L E ++G +
Sbjct: 259 AKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVL 318
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
+ +G LK M G PNV TYN L+ Y + A +F+ M G + +Y
Sbjct: 319 EAQG---VLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYS 375
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
LI G C RID+ ++ E +G Y ++++ + + EA E K M
Sbjct: 376 ILINGYCMVKRIDEAKQLFN--EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMH 433
Query: 336 K--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
P S+ + GFC G + A R F M PN+V+Y LI + C+ +
Sbjct: 434 TNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLN 493
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSG 450
A +L E+ HG P + T+++GLC++G + AL + +EED G P
Sbjct: 494 HARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEED------GCPPNEF 547
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
Y+ +I+ + A L+ +M KG + D
Sbjct: 548 SYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 11/231 (4%)
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ-DEALEYLKQME--KLFPRAVD 343
IDD L M K I +N +L + R Q D + KQME L P
Sbjct: 71 IDDALASFNHMLHRKPLPC--IIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I FC+ +V+ ++I+ G P ++ + LI+ C+ +A EL +M
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEK 462
G P T+ T+++GLC+ G A L+++ +G G P YS LI +LC+
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKK----MGEVGCQPDVVTYSTLIDSLCKD 244
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVSF 512
A + M KGI P +++ SL+ L + W +LNEM S
Sbjct: 245 RLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL 295
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 212/449 (47%), Gaps = 31/449 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K DIDLA
Sbjct: 112 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 171
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M A+ ++ D + ++ LC V D L M+++G++PN V Y++LI LC
Sbjct: 172 LNK-MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 230
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE V A L + PD+
Sbjct: 231 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 290
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C RL K K F M K C P++DTYN LI
Sbjct: 291 TYNSLINGFCM----------------HDRLDKAKQMFEF---MVSKDCFPDLDTYNTLI 331
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C++ ++ ++F +M G+ + VTY TLI+GL G D+ K+ + M +G
Sbjct: 332 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM--VSDG 389
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I Y+ +L GL + ++ALE M+K + + I G C G V+D
Sbjct: 390 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 449
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNVV Y+ +I C + ++EA L+K+M G LP + T+NT++
Sbjct: 450 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 509
Query: 422 CRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 510 LRDGDKAASAELIREMRSCRFVGDASTIG 538
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 33/430 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 104 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 163
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L++ ME E + V F+ +I + CK ++ +AL L ++ + G P+VVT +
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 223
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LCS GR DA ++L + E+ + GK + +M ++
Sbjct: 224 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 283
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TYN LI+ +C LD A +F M + TY+TLI+G C R++DG
Sbjct: 284 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 343
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ + M S G G Y +++ GL+ + D A + KQM + + P + S+ +
Sbjct: 344 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A FD M + ++ IY +I C+ +V + +L ++ G
Sbjct: 402 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 461
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A LK ++ED G LP SG Y+ LI+A G
Sbjct: 462 PNVVTYNTMISGLCSKRLLQEAYALLKKMKED------GPLPDSGTYNTLIRAHLRDGDK 515
Query: 466 QSASMLLVQM 475
+++ L+ +M
Sbjct: 516 AASAELIREM 525
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 195/417 (46%), Gaps = 44/417 (10%)
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL------MSDMEEPNDVTFSILICAYCK 159
++KSR + P+ +N L+ ++ K K SL M EP+ VT S L+ YC
Sbjct: 33 MVKSRPL-PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCH 91
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+ + +A+ L+++ G+ PD +T T ++ L + +AV +++ ++G
Sbjct: 92 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 151
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G + L +ME +V +N +I S C+ +D AL++F +M+
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 211
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
GI N VTY +LI LCS GR D ++L M + K + +N+++ +E +
Sbjct: 212 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP--NLVTFNALIDAFVKEGK 269
Query: 324 QDEALEYLKQMEKLFPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVP 374
EA EKL + RS+ I GFC+ ++ AK+ F+ M+ + P
Sbjct: 270 FVEA-------EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++ Y+ LI +C+ +RV + +EL +EM+ G + T+ T++ GL G+ A K+
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ + G P YS L+ LC G + A + M I D + +++
Sbjct: 383 KQ---MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 11/232 (4%)
Query: 275 DTLIRGLCSGG--RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE--ALEY 330
D L G+ G ++DD + + M S+ I +N +L + + + D +L
Sbjct: 9 DCLFVGISWGKDLKLDDAIGLFGGMVKSRPLPS--IFEFNKLLSAIAKMKKFDLVISLAL 66
Query: 331 LKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L +M KL P V S + G+C + DA DQM+E G P+ + + LIH
Sbjct: 67 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 126
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ EA L+ M G P T+ V++GLC++G++ A L+ + +
Sbjct: 127 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV- 185
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++ +I +LC+ A L +M KGI P+ +T++SL+ CL W
Sbjct: 186 --IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 235
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 243/506 (48%), Gaps = 29/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD +F T I + + + VK + + P++ FN+++D L + D A F
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++KM+ G++ TY+IL+KGL R+GD + +L M +G PN ++YN LI S
Sbjct: 331 -KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 389
Query: 128 KNGKVGRA---RSLM-SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A + LM S T++ LI YCK NA LL++ S GF +
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449
Query: 184 TITKVLELLCSVGRVMDAVEILEE------SGEQGRLGK-VKGGCRFLKEME-------- 228
+ T V+ LLCS A+ + E S G L + G C+ K +
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509
Query: 229 -RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG + + T N L+ CE G LD A + ++ G + V+Y+TLI G C ++
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D+ L M K G K Y+ ++ GL+ N+ +EA+++ ++ + P S
Sbjct: 570 DEAFMFLDEM--VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C E+ + FD+M+ + PN V+Y+ LI AYC+ R+ A EL ++M
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P ++T+ +++ G+ V A KL+ E+MR G P HY+ LI + G
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEA-KLLFEEMR--MEGLEPNVFHYTALIDGYGKLGQM 744
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
LL +M K + P+ +T+ ++
Sbjct: 745 VKVECLLREMHSKNVHPNKITYTVMI 770
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 211/507 (41%), Gaps = 63/507 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
M PS N +L LV+ + + + ++ GV D Y + + C +V +
Sbjct: 235 MFPSKTTCNILLTSLVRAN-EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 293
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAY 157
KL M+ GV PN V +NT+I L G+ A M EP +T+SIL+
Sbjct: 294 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 353
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
+ + + +A +L++ GF P+V+ +++ G + A+EI + +G
Sbjct: 354 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 413
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ G+ R LKEM G N ++ +I C + DSAL +
Sbjct: 414 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 262 MKIDGIS-------------------------W------NFV----TYDTLIRGLCSGGR 286
M + +S W FV T + L+ GLC G+
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+D+ +I + E G YN+++ G + + DEA +L +M K L P
Sbjct: 534 LDEAFRIQK--EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ I G VE+A + +D G +P+V Y +I C+ ER E E EM
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P +N ++ CR G + AL+L EDM+ +G P S Y+ LIK +
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMK--HKGISPNSATYTSLIKGMSIISR 708
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +L +M +G+ P+ + +L+
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALI 735
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 184/397 (46%), Gaps = 32/397 (8%)
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
+GV P+ ++ T I++ CK GKV A L S MEE PN VTF+ +I
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A + EK G P ++T + +++ L R+ DA +L K
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL-------------------K 367
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +KG PNV YN LI S+ E G L+ A+++ + M G+S TY+TLI+G C G
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+ D+ ++L+ M G + SV+ L D AL ++ +M + P
Sbjct: 428 QADNAERLLKEMLSI--GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 485
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I G C G A + Q + +G V + + L+H C+ ++ EA + KE+
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G G + ++NT++SG C + + A ++E ++ RG P + YS LI L
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK---RGLKPDNYTYSILICGLFNMN 602
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
+ A G+LPD T++ ++ C +++T
Sbjct: 603 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ D YTY++++ G C R +G + M S+ V+PN+V+YN LI + C++G++
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L DM+ PN T++ LI + A +L E+ G P+V T +++
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGK-VKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G+LG+ VK C L+EM K PN TY ++I Y
Sbjct: 737 -------------------GYGKLGQMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
G + A + N+M+ GI + +TY I G G + + K
Sbjct: 777 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 205/438 (46%), Gaps = 23/438 (5%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ SG + D YT+ L+ G C TN+V L M RG + V Y TLI LC+ G+
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ A L +M++P+ ++ L+ C E L++L + G+ P V++
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 192 LCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPN 235
C + +A E+L+E E+G + G++ R L+ M+ +GC PN
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TYN L+ +C G + A+ + N M+ G++ + VTY+ LIRG C G I+ ++L+
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
LME +G YN+++ L ++ + D+A +E + P AV + I G C
Sbjct: 241 LMEG--DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCK 298
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + A + ++M+ G P+ Y I C+ + +E + EM P
Sbjct: 299 SGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVN 358
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ V+ L ++ N G + E + G P Y+ ++A C +G A +L+
Sbjct: 359 YTIVIHKLLKERNYGLVARTWGE---MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 415
Query: 474 QMVGKGILPDYLTWNSLL 491
+M G+ D + +N+L+
Sbjct: 416 EMSKNGVTVDTMAYNTLM 433
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/512 (25%), Positives = 222/512 (43%), Gaps = 40/512 (7%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
VI + ++D ++ +L+ P++ +N+++ E KM A
Sbjct: 151 AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC 210
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV D TY +L++G C+ + F+LL +M+ G+ + YN LI++LCK+G+ +A
Sbjct: 211 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 270
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
SL +E +PN VTF+ LI CK A LEK S G PD T + +E
Sbjct: 271 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEH 330
Query: 192 LCSVGRVMDAVEILEESGEQG-------------RLGKVKGG---CRFLKEMERKGCLPN 235
LC + + + + E ++ +L K + R EM GC P+
Sbjct: 331 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 390
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY + +YC G L+ A +V +M +G++ + + Y+TL+ G S G+ D + IL+
Sbjct: 391 VVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILK 450
Query: 296 LMEDSKEGSKG-----------RISPYNSVL----YGLYRENQQDEALEYLKQMEK--LF 338
M R+ VL G+++ + + M+K
Sbjct: 451 QMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFL 510
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + S + GF DG E+A M E+ N IY L+ +C+ +R +A L
Sbjct: 511 PNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 570
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ M HG++P ++ +LSGL +G A ++ M + P + +I
Sbjct: 571 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF---MNSRWKDYSPDEIVWKVIIDG 627
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L +KG + +++ + P + T+ L
Sbjct: 628 LIKKGHSDISREMIIMLERMNCRPSHQTYAML 659
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 210/515 (40%), Gaps = 45/515 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD ++ +++GL A + + + PS + + +++D +E
Sbjct: 74 PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEM 133
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G+ T ++ C R+ D ++L +MK RG KPN YN L+ C
Sbjct: 134 LQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCN 193
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV +A +L++ M P+ VT+++LI C + ++ +A LL G + D T
Sbjct: 194 EGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYT 253
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC GR A C +E +G PN T+N LI+
Sbjct: 254 YNALINALCKDGRTDQA-------------------CSLFDSLETRGIKPNAVTFNSLIN 294
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL--QLMEDSKE 302
C++G D A M G + + TY + I LC +GL + L +D K
Sbjct: 295 GLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP 354
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
+ Y V++ L +E +M P V + + +C++G + +A
Sbjct: 355 STVN----YTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 410
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ +M + G + + Y+ L+ + + A ++K+MT +P T+ +L
Sbjct: 411 ENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRH 470
Query: 421 LCRQGNVGTALKLVEE---------DMRGI-----GRGSLPGSGHYSPLIKALCEKGGFQ 466
L R V L L D+ G+ LP SG YS +++ E G +
Sbjct: 471 LVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTE 530
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
A+ L+ M I + + +L+ C + +L
Sbjct: 531 EATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYL 565
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 211/414 (50%), Gaps = 27/414 (6%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
C + KL+ +K +G+KP+ IYN +I LCKNG+V A L+ M + P++
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
V ++ +I +CK N+ A L ++ VPD+VT T V+ +C G++++A E+ E
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+G + G++K +M +KG PNV TY L C+ G
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+D A ++ ++M G+ N TY+T++ GLC G I+ +K+++ M+ + G Y
Sbjct: 468 IDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLA--GFYPDTITY 525
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+++ + + +A E L+ M ++L P V ++ + GFC+ G +ED +R + M+E
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G +PN ++ L+ YC + +R +E+ K M G +P ++T+N ++ G C+ N+
Sbjct: 586 KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
A L +E + +G + Y LI+ ++ F A L +M G++ +
Sbjct: 646 AWFLHKE---MVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 218/467 (46%), Gaps = 28/467 (5%)
Query: 48 IFNSILDVLVKEDIDL-ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
+F+ VLV+ L A+ + K + V D L + C + K+
Sbjct: 173 VFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEE 232
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEEN 162
GV N+V N ++H LC+ GKV A +L+ M + P+ V++ +++ YC+
Sbjct: 233 FPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGE 292
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------- 212
L L L+++ G PD ++ LLC G V++A ++L + G
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352
Query: 213 ------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+LG V C+ EM RK +P++ TY +I C++G + A ++FN+M + G
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + VTY LI G C G + + + M ++G + Y ++ GL + + D
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQM--VQKGLTPNVVTYTALADGLCKNGEIDV 470
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A E L +M + L P + + G C GN+E + ++M G P+ + Y L+
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
AYC+ + +A EL++ M P TFN +++G C G + +L+E + +G
Sbjct: 531 AYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE---KG 587
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+P + ++ L+K C K ++ + + M +G++PD T+N L+
Sbjct: 588 IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 205/434 (47%), Gaps = 24/434 (5%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
++ V+K D + + P I+N+I+ +L K + + M GV D+ Y
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---- 142
++ G C V KL M+ + + P+ V Y ++IH +CK+GK+ AR + ++M
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG 412
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
EP++VT++ LI YCK + A + + G P+VVT T + + LC G + A
Sbjct: 413 LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVAN 472
Query: 203 EILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
E+L E +G ++G ++ + ++EM+ G P+ TY L+ +Y
Sbjct: 473 ELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + A ++ M + VT++ L+ G C G ++DG ++++ M + +G
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE--KGIMP 590
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ +NS++ +N E K M + P + ++ I G C N+++A
Sbjct: 591 NATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLH 650
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M+E+G YD LI + + ++ EA +L +EM HG + ++ + +
Sbjct: 651 KEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEE 710
Query: 425 GNVGTALKLVEEDM 438
GN L+L +E M
Sbjct: 711 GNWEITLELCDEFM 724
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 198/420 (47%), Gaps = 36/420 (8%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAY----- 157
L++ K G P ++++ L +NG V A+ L + V S+ C
Sbjct: 160 LIYTYKDWGSHP--LVFDLYFQVLVENGFVLEAQKLFHKLLR-YGVVVSVDSCNLFLSRL 216
Query: 158 -CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---- 212
C E + A+ + E+ G + V+ VL LC +G+V +A +L + ++G
Sbjct: 217 SCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPD 276
Query: 213 ------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
R+G++ + + E++ KG P+ YN +I C+ G + A +
Sbjct: 277 VVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLR 336
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M+ G+ + V Y T+I G C G + K+ M K I Y SV++G+ +
Sbjct: 337 GMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPD--IVTYTSVIHGICK 394
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ EA E +M + L P V + I G+C G +++A +QM+++G PNVV
Sbjct: 395 SGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVT 454
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-D 437
Y L C+ + A+EL+ EM+ G P T+NT+++GLC+ GN+ +KL+EE D
Sbjct: 455 YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
+ G P + Y+ L+ A C+ G A LL M+ K + P +T+N L+ C+S
Sbjct: 515 LAGF----YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMS 570
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 222/447 (49%), Gaps = 35/447 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
++ F ++IR G A + + VK + + ++P + FNS+L VL+K ++A+ Y
Sbjct: 154 EDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVY 213
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV+ D YTY IL++G C + V +GF M S P+ V YNTL+ LC+
Sbjct: 214 DEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCR 273
Query: 129 NGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
GK+ A +L++ M + P+ VT++ LI YC+++ + AL +LE+ G P++
Sbjct: 274 AGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNI 333
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ LC + EILE+ G G +P+ T+N L
Sbjct: 334 VTYNTLIKGLCEAQKWDKMKEILEQMKGDG------------------GSIPDACTFNTL 375
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QLMED-- 299
I+S+C G LD A VF +MK +S + +Y LIR LC G + +L E
Sbjct: 376 INSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEI 435
Query: 300 --SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFPRAVDRSLKILGFCVDGN 356
S G K + Y + L + +A L+Q M++ + + ILG C +G+
Sbjct: 436 LLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGS 495
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
E+ M+ +P++ IYD LI + ++++ A E +++M Y P ST+++
Sbjct: 496 YENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHS 555
Query: 417 VLSGLCRQGNV----GTALKLVEEDMR 439
+L+ L QG V G + ++E ++R
Sbjct: 556 ILNRLLEQGCVHESAGVIVMMLERNIR 582
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 193/429 (44%), Gaps = 44/429 (10%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN-------DVTFSI 152
F + + +G N Y ++ L + + AR+ + +E+ + D F+
Sbjct: 101 AFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNS 160
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI +Y + ++ L E G P VVT VL +L GR A E+ +E +
Sbjct: 161 LIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTY 220
Query: 213 RLGK--------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
+ ++G C+ F KEM C P+V TYN L+ C G + A
Sbjct: 221 GVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVA 280
Query: 256 LDVFNDM--KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
++ N M K +S + VTY TLIRG C +D+ L IL+ M + G K I YN+
Sbjct: 281 HNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEM--NGRGLKPNIVTYNT 338
Query: 314 VLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ GL + D+ E L+QM+ P A + I C GN+++A + F+ M +
Sbjct: 339 LIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKL 398
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEM-------TGHGYLPIASTFNTVLSGLCR 423
+ Y LI CQ+ +A L E+ + +G P+A+++ + LC
Sbjct: 399 EVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCE 458
Query: 424 QGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G A +++ + M+ RG+ P S Y +I C++G +++ LLV M+ + LP
Sbjct: 459 NGKTKKAERVLRQLMK---RGTQDPLS--YQIVILGHCKEGSYENGYGLLVWMLRRDFLP 513
Query: 483 DYLTWNSLL 491
D ++ L+
Sbjct: 514 DIDIYDYLI 522
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 188/463 (40%), Gaps = 44/463 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + +IRG + M+++ ++ F+ P + +N+++D L +K +L
Sbjct: 224 PDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNL 283
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+K + D TY L++G C V + +L M RG+KPN V YNTLI
Sbjct: 284 VNGMSKK---CKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLI 340
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC+ K + + ++ M+ P+ TF+ LI ++C NL A + E
Sbjct: 341 KGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEV 400
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------------G 215
D + + ++ LC G A + +E E+ L G
Sbjct: 401 SADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENG 460
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K K R L+++ ++G + +Y I+I +C+ G ++ + M + YD
Sbjct: 461 KTKKAERVLRQLMKRGTQDPL-SYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYD 519
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
LI G R D L + +E K K + S ++S+L L + E+ + M
Sbjct: 520 YLIDGFL---RKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMM 576
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
E+ + ++ S K L D ++D ++I + G V D ++ C + R
Sbjct: 577 LERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKNGF--CVKMDEVVQFLCNKRRAL 634
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
EA +L+ + N V+ LC+ A L E
Sbjct: 635 EACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYE 677
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 5/254 (1%)
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS-KGRIS 309
V A FN + G S N TY ++ L ++ L +E G K
Sbjct: 97 VPTKAFLFFNWIHEKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDR 156
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+NS++ E+++ + M+ + P V + +L G AK +D+M
Sbjct: 157 FFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEM 216
Query: 368 IEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
++ GV P+ Y+ LI +C+ V E KEMT P T+NT++ GLCR G
Sbjct: 217 LKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGK 276
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ A LV M + P Y+ LI+ C K A +L +M G+G+ P+ +T
Sbjct: 277 IKVAHNLVN-GMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVT 335
Query: 487 WNSLLICLSQQTTW 500
+N+L+ L + W
Sbjct: 336 YNTLIKGLCEAQKW 349
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 210/435 (48%), Gaps = 30/435 (6%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KKM+ V Y+ I++ GLC RV L+ M +G+KPN V YNTL+++
Sbjct: 202 FFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYI 261
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ ME N T+++LI Y + A + EK G D+
Sbjct: 262 KIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIH 321
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C +LG +K E+ +G + N TY LI
Sbjct: 322 VFTSIISWQC-------------------KLGNMKRAFALFDELNERGLVANAHTYGALI 362
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C +G LD+A + N+M+ G+ N V ++TLI G C G ID+ L++ +ME K+G
Sbjct: 363 HGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVME--KKG 420
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAK 361
+ I YN++ GL + N+ +EA +L M EK + P AV ++ I C +GN+ +A+
Sbjct: 421 FENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAE 480
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R F M ++G PNVV Y+ LI Y ++ +++EA L EM G T+ T++ G
Sbjct: 481 RVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGE 540
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C G V AL L+ E R +G Y+ +I L ++G + A L +M+ G+
Sbjct: 541 CVFGKVEEALTLLNEVCR---KGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLT 597
Query: 482 PDYLTWNSLLICLSQ 496
PD + SL+ L +
Sbjct: 598 PDDRVYTSLVANLHK 612
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ +N+++D K+ L A+ K M S G+ D YTY L+ G C+ +V +
Sbjct: 493 PNVVTYNTLIDGYSKKG-KLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALT 551
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
LL+ + +G+ + V Y +I L K G+ A L +M P+D ++ L+
Sbjct: 552 LLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLV 607
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 210/434 (48%), Gaps = 27/434 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +I GL I + V+ + + + P++ + ++++ L K
Sbjct: 161 PDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDV 220
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM +G + + TY+ ++ LC V D + L M RG+ PN YN+++H C
Sbjct: 221 FKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCN 280
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L +M PN VTF+IL+ CKE + A ++ E G PD+ T
Sbjct: 281 LGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIST 340
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C + R+M+ + + + M RKGC P +YNILI+
Sbjct: 341 YNALMDGYC-LQRLMNEAK------------------KVFEIMIRKGCAPGAHSYNILIN 381
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC++ +D A + +M ++ + VTY TL++GLC GR + L + + M G
Sbjct: 382 GYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM--CSYGP 439
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y +L G + DEAL+ LK M+ KL P V ++ I G + G +E AK
Sbjct: 440 HPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKE 499
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ +G P++ Y +I +E EA +L ++M G+LP + ++N ++ G
Sbjct: 500 LFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 559
Query: 423 RQGNVGTALKLVEE 436
+ + TA++L++E
Sbjct: 560 QNQDSSTAIRLIDE 573
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 194/422 (45%), Gaps = 37/422 (8%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
V D + M +P+ V + + S K + SL + M+ N + +I
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI C+ ++ ++ +L K F G PD +T ++ LC+ G++ +AVE+ E ++G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ G K+ME+ GC PNV TY+ +I S C+ +++ A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ ++M GI N TY++++ G C+ G++++ ++ + M GR N+V +
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM-------VGRDVMPNTVTF 306
Query: 317 -----GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
GL +E EA + M + + P + + G+C+ + +AK+ F+ MI
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G P Y+ LI+ YC+ R+ EA L+ EM P T++T++ GLC+ G
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKE 426
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L +E G P Y L+ C+ G A LL M K + P+ + +
Sbjct: 427 ALNLFKE---MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTI 483
Query: 490 LL 491
L+
Sbjct: 484 LI 485
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 200/448 (44%), Gaps = 46/448 (10%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
P+ + TVI GL G M DV K + + P++ +++I+D L K+ +
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKME---QNGCKPNVVTYSTIIDSLCKDRLVNDA 252
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M+ G+ + +TY ++ G C ++ + +L M R V PN+V + L+
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDG 312
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK G V AR + M EP+ T++ L+ YC + + A + E G P
Sbjct: 313 LCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPG 372
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ ++ C R MD + L L EM K P+ TY+
Sbjct: 373 AHSYNILINGYCK-SRRMDEAKSL------------------LAEMYHKALNPDTVTYST 413
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ C+ G AL++F +M G N VTY L+ G C G +D+ LK+L+ M++ K
Sbjct: 414 LMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKK 473
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF-----PRAVDRSLKILGFCVDGN 356
+ I Y ++ G++ + + A E KLF P ++ I G +G
Sbjct: 474 --LEPNIVHYTILIEGMFIAGKLEVAKELF---SKLFGDGTRPDIRTYTVMIKGLLKEGL 528
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++A F +M ++G +PN Y+ +I + Q + A L+ EM G + STF
Sbjct: 529 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQM 588
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+L ++ + +++ + MRG +G
Sbjct: 589 LL-------DLESQDEIISQFMRGSSQG 609
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 155/332 (46%), Gaps = 27/332 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PP+ + +++ G +N+ + ++V R ++ P+ F ++D L KE +
Sbjct: 265 PPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGR-DVMPNTVTFTILVDGLCKEGMVSEAR 323
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M GV+ D TY LM G CL + + K+ +M +G P + YN LI+
Sbjct: 324 LVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGY 383
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ ++ A+SL+++M P+ VT+S L+ C+ AL L ++ S+G P++
Sbjct: 384 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNL 443
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +L+ C G + +A+++ LK M+ K PN+ Y IL
Sbjct: 444 VTYVILLDGFCKHGHLDEALKL-------------------LKSMKEKKLEPNIVHYTIL 484
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I G L+ A ++F+ + DG + TY +I+GL G D+ + + MED +
Sbjct: 485 IEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMED--D 542
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G YN ++ G + A+ + +M
Sbjct: 543 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 574
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 214/440 (48%), Gaps = 28/440 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T+I GL + V+ D + P + +N+I++ L K A A
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGL 220
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM +G Q + TY+ L+ LC V + + MK++G+ P+ Y +LI LCK
Sbjct: 221 LKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A +L+++M P+ VTF++L+ +CKE + AL +L+ G P+VVT
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +M + + E +L V M KGC PN+ +YNILI+
Sbjct: 341 YSS----------LMYGYSLWTDVVEARKLFHV---------MITKGCKPNIFSYNILIN 381
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A+ +FN+M G++ N V+Y+TLI G C G++ + + + M G+
Sbjct: 382 GYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM--CTNGN 439
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ +L G ++ +A + M+ + P V ++ + C GN +DA++
Sbjct: 440 LPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARK 499
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ +G P+V +Y +I+ C+E + EA E + M G P ++N ++ GL
Sbjct: 500 LFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLL 559
Query: 423 RQGNVGTALKLVEEDMRGIG 442
+ + AL LV E MR G
Sbjct: 560 QHKDESRALLLVGE-MRDRG 578
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 211/454 (46%), Gaps = 65/454 (14%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV-GRARSLMSDME----EPNDVTFS 151
+ D + M R P + + L+ ++ K G+ SL ME PN T S
Sbjct: 73 IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
I + +C+ + + +L K G P +VT T ++ LC VG AVE+ ++ +
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G ++G+ LK+ME GC PN+ TY+ LI S C +++ A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCS-------------------------------- 283
LD+F+ MK GIS + TY +LI+GLC
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312
Query: 284 ---GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG--LYRENQQDEALEYLKQMEKLF 338
G++ + L +L+ M ++ G + + Y+S++YG L+ + + L ++ +
Sbjct: 313 FCKEGKVSEALGVLKTM--TEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCK 370
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P ++ I G+C +++A + F++MI +G PN V Y+ LIH +CQ ++REA +L
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIK 457
+ M +G LP T++ +L G C+QG +G A +L R + L P Y+ L+
Sbjct: 431 FRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL----FRAMQSTYLKPNLVMYTILVH 486
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
A+C+ G + A L ++ +G+ P + +++
Sbjct: 487 AMCKSGNHKDARKLFSELFVQGLQPHVQLYTTII 520
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/446 (27%), Positives = 207/446 (46%), Gaps = 31/446 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G+Q T+ L+ GLC +L M ++G +P+ YNT+I+ LCK G
Sbjct: 153 KVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIG 212
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A L+ MEE PN VT+S LI + C++ + AL + + G PD+ T T
Sbjct: 213 ETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYT 272
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC R +A +L EM +P++ T+N+L+ ++
Sbjct: 273 SLIQGLCKFSRWKEASALLN-------------------EMTSLNIMPDIVTFNVLVDTF 313
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + AL V M G+ N VTY +L+ G + + K+ +M +G K
Sbjct: 314 CKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM--ITKGCKP 371
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN ++ G + + DEA++ +M + L P V + I GFC G + +A+ F
Sbjct: 372 NIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLF 431
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
M G +P++ Y L+ +C++ + +A L + M P + ++ +C+
Sbjct: 432 RNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKS 491
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
GN A KL E +G P Y+ +I LC++G A M G PD
Sbjct: 492 GNHKDARKLFSELFV---QGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDE 548
Query: 485 LTWNSLLICLSQ-QTTWLLLLLLNEM 509
+++N ++ L Q + LLL+ EM
Sbjct: 549 ISYNVIIRGLLQHKDESRALLLVGEM 574
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 14/219 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
P+ + +I G +A+ I++ ++ + + +TP+ +N+++ ++E DL
Sbjct: 371 PNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDL 430
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
R M +G D +TY+IL+ G C +G F+L M+S +KPN V+Y L+
Sbjct: 431 FR-----NMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILV 485
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H++CK+G AR L S++ +P+ ++ +I CKE L AL + G
Sbjct: 486 HAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCP 545
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
PD ++ ++ L A+ ++ E ++G + V+
Sbjct: 546 PDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 203/403 (50%), Gaps = 25/403 (6%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P FN++L +L++ + +A++ ++ S V + Y++ I++ G C F+
Sbjct: 121 APLSNTFNNLLCLLIRSNY-FDKAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFR 179
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL V++ G+ PN VIY TLI CKNG V A++L M+ PN T+S+L+ +
Sbjct: 180 LLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFF 239
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K+ + E G VP+ ++ C+ G V A ++ E E+G
Sbjct: 240 KQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVM 299
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R K + + ++ + G PN+ TYNILI+ +C+ G +D+A+ +FN +
Sbjct: 300 TYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQL 359
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
K G+S VTY+TLI G + L +++ ME+ + ++ +++ Y ++ R N
Sbjct: 360 KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE-RCIARSKVT-YTILIDAFARLN 417
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D+A E MEK L P S+ I G CV+GN+++A + F + E PN VIY+
Sbjct: 418 YTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYN 477
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+IH YC+E A L+ EM G +P ++F + + LCR
Sbjct: 478 TMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCR 520
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 198/451 (43%), Gaps = 29/451 (6%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y ++ ++ LH M G P S +N L+ L ++ +A + + ++
Sbjct: 92 YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151
Query: 144 EP---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
N +F I+I C+ V LL FG P+VV T +++ C G VM
Sbjct: 152 SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVML 211
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A + + G + G + G + + M R G +PN YN LIS
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLIS 271
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC G++D A VF +M+ GI+ +TY+ LI GLC G + + +K++ + +K G
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH--KVNKVGL 329
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN ++ G + D A+ Q++ L P V + I G+ N+ A
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E + V Y LI A+ + +A E+ M G +P T++ ++ G C
Sbjct: 390 LVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXC 449
Query: 423 RQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
GN +K + + +G L P S Y+ +I C++G A LL +MV G++
Sbjct: 450 VNGN----MKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505
Query: 482 PDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
P+ ++ S + L + W LLL +M++
Sbjct: 506 PNVASFCSTMGLLCRDEKWKEAELLLGQMIN 536
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P + T+I G + + ++ A DLV + S + ++D + +
Sbjct: 366 PTLVTYNTLIAGYSK---VENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKA 422
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M SG+ D YTY++L+ G C+ + + K + ++PNSVIYNT+IH
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHG 482
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK G RA L+++M PN +F + C++E A +LL + + G P
Sbjct: 483 YCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPS 542
Query: 182 V 182
V
Sbjct: 543 V 543
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+YD +++AY +A + M G+ P+++TFN +L L R A +
Sbjct: 91 LYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNV- 149
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + + + +I CE G F LL + G+ P+ + + +L+
Sbjct: 150 ---LKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLI 200
>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 239/502 (47%), Gaps = 58/502 (11%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD 81
RA M++D + + N+ S+ +NS+L L DI ++ ASGV ++
Sbjct: 179 SRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD---VYNEIKASGVPQNE 235
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
YT IL+ GLC +R+ D L P+ V +N L+ CK G V A+S
Sbjct: 236 YTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCM 295
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M + P+ +++IL+ C ++ AL + G PD+VT +L + R
Sbjct: 296 MIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYN----ILANGFR 351
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ LG + G + ++ M G P++ TY ILI +C+ G ++ +
Sbjct: 352 I---------------LGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFK 396
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME------DSKEGSKG----- 306
+ M G+ + VTY L+ LC GRID+ + +L ME D S+G
Sbjct: 397 LKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEA 456
Query: 307 ----------RISPYN----SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
RI P + +++ GL+ + EA Y + K + + ++ I G
Sbjct: 457 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 516
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+ GN+ +A R + Q+IE+G P +V ++ LI+ +C++ ++ EA +L+ + HG +P
Sbjct: 517 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 576
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
+ T+ T+++G C +G++ + ++ E + + I P Y+ ++K LC++G +
Sbjct: 577 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK----PTQITYTVVVKGLCKEGRLHESV 632
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
LL M +G+ PD +T+N+++
Sbjct: 633 QLLKYMYARGLFPDQITYNTVI 654
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 237/527 (44%), Gaps = 64/527 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
P +E +I GL R + D V PS+ FN+++ K +D+A++
Sbjct: 232 PQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKS 291
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+ M+ G+ D Y+Y IL+ GLC+ + + + + M++ GV+P+ V YN L +
Sbjct: 292 FF-CMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G + A ++ M P+ VT++ILIC +C+ N+ + L EK S G +
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSI 410
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG--------RLGKVKGGCRFLKEMERKGCLP 234
VT T +L LC GR+ +AV +L E G G V+ +EM K P
Sbjct: 411 VTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYP 470
Query: 235 N-----------------------------------VDTYNILISSYCETGVLDSALDVF 259
N + YNI+I Y + G + A+ +
Sbjct: 471 NSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSY 530
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ GIS VT+++LI G C G++ + +K+L ++ G Y +++ G
Sbjct: 531 KQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK--VHGLVPTSVTYTTLMNGYC 588
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
E + L +ME + P + ++ + G C +G + ++ + M G P+ +
Sbjct: 589 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQI 648
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV--- 434
Y+ +I ++C+ +++A +L +M H P T+N +++GLC GN+ A +L+
Sbjct: 649 TYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 708
Query: 435 -EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
++ +R Y+ +IKA C KG Q+A + QMV +G
Sbjct: 709 QDQSIRLTKVA-------YTTIIKAHCAKGDVQNALVFFHQMVERGF 748
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 231/525 (44%), Gaps = 58/525 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++ GL A + + ++ T+ + + P + +N + + + L +
Sbjct: 303 PDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF--RILGLISGAW 360
Query: 69 R--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ ++M+ +G+ D TY IL+ G C + + FKL M S+G+K + V Y L+ SL
Sbjct: 361 KVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSL 420
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSI--------LICAYCKEENLVNALV---LLE 171
CK+G++ A L+ +ME +P+ +T+S L C + N+ V ++
Sbjct: 421 CKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 480
Query: 172 KSFSFGFVP------DVVTITKVLELL----------CSVGRVMDAVEILEESGEQG--- 212
F G + D VT + V E + +G + +AV ++ E+G
Sbjct: 481 GLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISP 540
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+ GK+ + L ++ G +P TY L++ YCE G + S D+
Sbjct: 541 TIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDML 600
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M+ I +TY +++GLC GR+ + +++L+ M G YN+V+
Sbjct: 601 HEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM--YARGLFPDQITYNTVIQSFC 658
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ + +A + QM L P V ++ I G CV GN++DA R + ++ V
Sbjct: 659 KAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKV 718
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y +I A+C + V+ A +M G+ ++ V++ LC++ N+ T K
Sbjct: 719 AYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKR-NLITDAKFFFCM 777
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
M + G P ++ A G S + M+ G+LP
Sbjct: 778 M--LTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 146/543 (26%), Positives = 248/543 (45%), Gaps = 58/543 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +I LGRA ++ + P+L +N+++D L K D A
Sbjct: 42 PDVVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRL 101
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +G D TY L+ L R+ + F L M+ RG P++ YN+LI+ L
Sbjct: 102 L-AEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLG 160
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ +A L+ +ME P+ +T+S LI K+ V A L ++ G PD +
Sbjct: 161 KVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSI 220
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ L GRV DA+E+L+E E+G ++G + L EM
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+R GC P+V TY+ LI+ + LD A V M+ +G + +TY+TLI GL G +
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLL 340
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+D ++ M+ +G + Y++++ L + + + A ++ME + P
Sbjct: 341 NDAGRLFDRMK--SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYC 398
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G V+DA R F +M +G P+V+ Y+ +++ + R +EA ++ ++M
Sbjct: 399 SIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-------------------------- 439
G LP +T++ +L GL + V A L++E +
Sbjct: 459 GLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEA 518
Query: 440 ------GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+G PG+ Y+ LI AL + G A L + +G PD ++++SL+
Sbjct: 519 HELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISA 578
Query: 494 LSQ 496
L Q
Sbjct: 579 LGQ 581
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 213/479 (44%), Gaps = 65/479 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + ++I GLG+ + VKA K+F
Sbjct: 181 PPDVMTYSSLITGLGKD---GETVKA------------FKLF------------------ 207
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M G + D T+ LM L RV D +LL MK RGVKP V YN LI
Sbjct: 208 --QEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFG 265
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A +L+ +M+ +P+ VT+S LI K L A +L+K G PD +
Sbjct: 266 KVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTI 325
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ L G + DA GRL M+ KGC P+V TY+ LI
Sbjct: 326 TYNTLINGLGKAGLLNDA----------GRL---------FDRMKSKGCNPDVVTYSTLI 366
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++ + ++SA +F +M+ GI + TY ++I L G++DD ++ M +G
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRG--KG 424
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN+ L L R + EA + + M++ L P +LG V+DA
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDAC 484
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++IE+G + + +D + V EA EL++ G P AS++N ++ L
Sbjct: 485 GLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDAL 544
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+ G V A + ED++ +G P YS LI AL + G +A LL +M +G+
Sbjct: 545 AKAGRVSEAFNTL-EDLK--EQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 206/473 (43%), Gaps = 93/473 (19%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME------------------------------ 143
PN V YN+L+++L K G+ A+ L +++
Sbjct: 7 PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66
Query: 144 ---------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+PN T++ L+ K AL LL + G VPDV T ++ L
Sbjct: 67 VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 195 VGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPNVDT 238
GR+ +A + E E+ G++G+ + L+EMER GC P+V T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y+ LI+ + G A +F +MK G + +T+ L+ L GR+DD L++L M+
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 299 D---------------------------------SKEGSKGRISPYNSVLYGLYRENQQD 325
+ + G K + Y+ ++ GL + +Q D
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
EA + LK+MEK P + + I G G + DA R FD+M +G P+VV Y LI
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
A + RV A L +EM G P T+ ++++ L + G V A +L E MR G+
Sbjct: 367 TALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE-MR--GK 423
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G P Y+ + +L G F+ A + M G+LPD T+++LL+ LS+
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSK 476
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 190/411 (46%), Gaps = 58/411 (14%)
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
M PN VT++ L+ A K A +L E+ + + PDVV+ + ++ L G+
Sbjct: 1 MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60
Query: 199 MDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
A+E++ E + G+ G+ R L EM GC+P+V TYN L
Sbjct: 61 EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
IS+ + G L A +F +M+ G + TY++LI GL GR +++L+ ME +
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEME--RH 178
Query: 303 GSKGRISPYNSVLYGLYRENQQ-----------------------------------DEA 327
G + Y+S++ GL ++ + D+A
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDA 238
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
LE L +M++ + P V + I GF G++ +A D+M G P+VV Y CLI
Sbjct: 239 LELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITG 298
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+ ++ EA +++K+M G P T+NT+++GL + G + A +L + R +G
Sbjct: 299 LIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFD---RMKSKGC 355
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
P YS LI AL + +SA +L +M GI PD T+ S++ L +
Sbjct: 356 NPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGK 406
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 25/315 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + T+I GLG+A ++ND + D + P + +++++ L K +
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M + G+Q D +TY ++ L +V D +L M+ +G+ P+ + YN ++SL
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+ AR + DM+E P+ T+ L+ K + + +A LL++ G D +
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ LE+L S G V +A E+L+ + KG P +YN LI
Sbjct: 501 KFDECLEILTSWGNVDEAHELLQFANS-------------------KGLWPGASSYNALI 541
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + G + A + D+K G + V+Y +LI L G+ID ++L+ M SK G
Sbjct: 542 DALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEM--SKRG 599
Query: 304 SKGRISPYNSVLYGL 318
K Y++++ L
Sbjct: 600 LKLSPRSYSNLVRKL 614
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 6/215 (2%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-I 61
S+ PD + ++I LG+A ++D + + ++P + +N+ L+ L +
Sbjct: 386 ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRF 445
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
AR + + M SG+ D TY L+ GL T V D LL + +G +S+ ++
Sbjct: 446 KEARKIF-EDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+ L G V A L+ P +++ LI A K + A LE G
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
PD+V+ + ++ L G++ A E+LEE ++G
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 246/512 (48%), Gaps = 51/512 (9%)
Query: 18 IRGLGRA-RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
I+GL A + D+V++ L PS+ F ++ V+V+ +D+ + +RK M
Sbjct: 56 IKGLEDAIDLFGDMVRSRPL-------PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
V + Y++ ILMK C +++ + G P V ++TL+H LC ++ A
Sbjct: 109 -VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA 167
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
L M +PN VTF+ L+ C+E +V A+ LL++ G P+ +T +++ +C +
Sbjct: 168 LDLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 227
Query: 196 GRVMDAVEILEESGE-------------QGRLGKVKGGC---------RFLKEM-ERKGC 232
G + A+ +L + E + R + G C + L+EM ERK
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+V TYN LI+++ + G A +++++M GI + +TY ++I G C R+D
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+ LM + +G I +N+++ G R + D+ ++ L +M + L + + I G
Sbjct: 348 MFYLM--ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 405
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG------ 404
FC G++ A+ +M+ G PNVV + L+ C ++++A E+ K M
Sbjct: 406 FCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDID 465
Query: 405 -----HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+G P T+N ++SGL +G A +L EE RG +P + Y+ +I L
Sbjct: 466 ASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH---RGIVPDTITYNSVIHGL 522
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C++ A+ + M K P+ +T+ +L+
Sbjct: 523 CKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/505 (26%), Positives = 234/505 (46%), Gaps = 51/505 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T++ GL I++ A DL + P++ F ++++ L +E +
Sbjct: 146 PTVVTFSTLLHGLCVEDRISE---ALDLFHQM-CKPNVVTFTTLMNGLCREGRVVEAVAL 201
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS----RGVKPNSVIY----- 119
+M+ G+Q + TY ++ G+C ++GD L++++ +KPN VI+
Sbjct: 202 LDRMLEDGLQPNQITYGTIVDGMC---KMGDTVSALNLLRKMEEVSHIKPNVVIWPLERR 258
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
+I+ C +G+ A+ L+ +M E P+ VT++ LI A+ KE A L ++
Sbjct: 259 TCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML 318
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVK 218
G +P +T + +++ C R+ A + +G R +V
Sbjct: 319 PRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVD 378
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
G + L EM G + N TY LI +C+ G L++A D+ +M G+ N VT +TL+
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLL 438
Query: 279 RGLCSGGRIDDGLKILQLMEDSK---------EGSKGRISPYNSVLYGLYRENQQDEALE 329
GLC G++ D L++ + M+ SK G + + YN ++ GL E + EA E
Sbjct: 439 DGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 498
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M + P + + I G C +++A + FD M + PNVV + LI+ YC
Sbjct: 499 LYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 558
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ RV + EL EM G + A T+ T++ G + GN+ AL + +E M G P
Sbjct: 559 KAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMM---ASGVYP 615
Query: 448 GSGHYSPLIKALCEKGGFQSASMLL 472
+ ++ L K + A +L
Sbjct: 616 DTITIRNMLTGLWSKEELKRAVAML 640
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 239/510 (46%), Gaps = 43/510 (8%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
F ++++ L +E L +M+ G Q D TY ++ G+C +L M
Sbjct: 13 FTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMD 72
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
+K N VIY+ ++ LCK+G +A+++ ++M E PN +T++ +I YC
Sbjct: 73 ESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWS 132
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-------GKV 217
+A LL PDVVT + ++ G+V A E+ E + +
Sbjct: 133 DAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMI 192
Query: 218 KGGCR---------FLKEMERKGCLPNVDTYNILIS-----------SYCETGVLDSALD 257
G C+ M KGC P++ T N LI +C+ G ++ A D
Sbjct: 193 DGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQD 252
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+F +M +G+S + VT +TL+ GLC G+++ L++ ++ + SK + N ++ G
Sbjct: 253 LFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLD--TATCNIIING 310
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+ + N+ DEA + + + V ++ I F +GN A+ + +M+ +G +P+
Sbjct: 311 MCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPS 370
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V Y+ ++ +C++ R+ EA +++ M G P TF+T++ G C+ G V L+L
Sbjct: 371 TVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFS 430
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
E + RG + + Y+ LI C+ G A + +MV G+ PD +T+ S+L +C
Sbjct: 431 EMCQ---RGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLC 487
Query: 494 LSQQTTWLLLLLLNEMVSFVMVVHELSAKE 523
+ L +L + S V HEL E
Sbjct: 488 TKAELQKGLTMLEDLQKS---VDHELEDDE 514
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 29/475 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
PD + T++ G+ + + D V A +++ + + + ++ I+++I+D L K+ +
Sbjct: 43 PDAVTYGTIVNGMCK---LGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKA 99
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+M G+ + TY ++ G C + D +LL M R + P+ V ++ LI++
Sbjct: 100 QNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINA 159
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K GKV A L +M P +T+S +I +CK L +A + + S G PD
Sbjct: 160 FVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPD 219
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG--RLGKVKGGCRFLKEMERKGCLPNVDTY 239
++T+ +++ C R + G ++G V +EM G P++ T
Sbjct: 220 IITLNTLIDGCCRAKRHL----------IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTC 269
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N L++ CE G L+ AL++F + + + T + +I G+C G ++D+ + +
Sbjct: 270 NTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSL-- 327
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEK-LFPRAVDRSLKILGFCVDGNV 357
G + + YN ++ +E A + YL+ + K + P V + + GFC +
Sbjct: 328 PVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRL 387
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E+A++ D M+ EG P+VV + LI YC+ RV + EL EM G + T+N +
Sbjct: 388 EEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNAL 447
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ G C+ G++ A + EE + G P + + ++ LC K Q +L
Sbjct: 448 IHGFCKVGDLNGAQDIFEE---MVSSGVCPDTITFRSMLAGLCTKAELQKGLTML 499
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+E G NVV + L++ C+E RV +A L+ M G+ P A T+ T+++G+C+ G+
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+AL + +R + + + YS ++ LC+ G A + +M KGI P+ L
Sbjct: 61 TVSALNM----LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVL 116
Query: 486 TWNSLL 491
T+N ++
Sbjct: 117 TYNCMI 122
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 248/558 (44%), Gaps = 75/558 (13%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
+SP + + + GR + D + ++ + PS++ N++L L++ D
Sbjct: 45 RSPAVLDVLVDTYKKSGR---VQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALL 101
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
R+ M+ +G+ D YTY+ L++ C K+L M+ RG N+V YN LI
Sbjct: 102 WKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG 161
Query: 126 LCKNGKVGRARSLMSDMEE---------------------------------------PN 146
LC++G V A DME+ PN
Sbjct: 162 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 221
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
V ++ LI + +E N A ++++ + G P+ +T ++ LC +G++ A +L+
Sbjct: 222 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 281
Query: 207 ESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ R K R L EME G PNV TY+I+I C++G
Sbjct: 282 QMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 341
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ A D+ +M G+ N Y LI G C G + +I M +K + P
Sbjct: 342 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM------TKVNVLP 395
Query: 311 ----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
YNS+++GL + + +E+ +Y QM++ L P S I G+ +G++E A++
Sbjct: 396 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 455
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M++ G PN VIY L+ +Y + + + + S K M G + + ++ L
Sbjct: 456 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 515
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
GN+ A +++ E + GS+P YS LI LC+ + A +L +M KG+ P+
Sbjct: 516 GNMEAAFRVLSEIEK---NGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNI 572
Query: 485 LTWNSLL--ICLSQQTTW 500
+ +N+L+ +C S ++
Sbjct: 573 VCYNALIDGLCKSGDISY 590
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 254/546 (46%), Gaps = 65/546 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL ++R N+ D +S + P++ ++ +++D ++E + AF
Sbjct: 185 PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG-NADEAFK 243
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVG----------------------------- 98
K+M+A+GVQ + TY L++GLC ++
Sbjct: 244 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 303
Query: 99 ------DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
D F+LL M++ G+ PN Y+ +IH LC++G+ +A L+ +M +PN
Sbjct: 304 RHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 363
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI YC+E N+ A + +K +PD+ ++ L VGRV ++ + +
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 423
Query: 209 GEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G L G ++ + ++ M G PN Y L+ SY ++ +
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ F M G+ + Y LI L S G ++ ++L +E K GS + Y+
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE--KNGSVPDVHVYS 541
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ GL + +++A L +M K + P V + I G C G++ A+ F+ ++ +
Sbjct: 542 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 601
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G VPN V Y LI C+ + A L EM G P A ++ + +G G++ A
Sbjct: 602 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 661
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ L+EE M G S+ ++ L+ C++G Q LL ++G+G++P+ LT ++
Sbjct: 662 MFLIEE-MFLRGHASI---SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 717
Query: 491 LICLSQ 496
+ LS+
Sbjct: 718 ISGLSE 723
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/490 (23%), Positives = 204/490 (41%), Gaps = 59/490 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R D + + ++P++ ++ ++ L + +
Sbjct: 290 PDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 349
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G++ + + YA L+ G C V ++ M V P+ YN+LI L K
Sbjct: 350 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 409
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V + + M+E PN+ T+S LI Y K +L +A L+++ G P+ V
Sbjct: 410 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 469
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEME 228
+LE + + +QG + G ++ R L E+E
Sbjct: 470 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G +P+V Y+ LIS C+T + A + ++M G+ N V Y+ LI GLC G I
Sbjct: 530 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 589
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ +NS+L + L P V + I
Sbjct: 590 YARNV-----------------FNSIL------------------AKGLVPNCVTYTSLI 614
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G++ +A +++M+ G P+ +Y L + +A L++EM G+
Sbjct: 615 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 674
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
I S+FN ++ G C++G + LKL+ M GRG +P + +I L E G
Sbjct: 675 SI-SSFNNLVDGFCKRGKMQETLKLLHVIM---GRGLVPNALTIENIISGLSEAGKLSEV 730
Query: 469 SMLLVQMVGK 478
+ V++ K
Sbjct: 731 HTIFVELQQK 740
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 220/522 (42%), Gaps = 64/522 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKE-DIDLA 64
P+ + +I GL ++ + KA+DL+ + P+ ++ ++ +E ++ LA
Sbjct: 325 PNVYTYSIMIHGLCQS---GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 381
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ KM V D Y Y L+ GL RV + K M+ RG+ PN Y+ LIH
Sbjct: 382 CEIF-DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIH 440
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
KNG + A L+ M + PNDV + L+ +Y K +++ + G +
Sbjct: 441 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 500
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FL 224
D ++ L S G + A +L E + G + V G C+ L
Sbjct: 501 DNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 560
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM +KG PN+ YN LI C++G + A +VFN + G+ N VTY +LI G C
Sbjct: 561 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 620
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
G I + + M + I+P Y+ + G ++A+ +++M L
Sbjct: 621 GDISNAFYLYNEMLATG------ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGH 673
Query: 341 AVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ---------- 388
A S L GFC G +++ + ++ G VPN + + +I +
Sbjct: 674 ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 733
Query: 389 ---------EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
E R S L +M G +P+ + ++ C++GN+ AL L +
Sbjct: 734 FVELQQKTSESAARHFSSLFMDMINQGKIPL-DVVDDMIRDHCKEGNLDKALMLRDVI-- 790
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ + + G Y ++ LC KG A LL +M +G L
Sbjct: 791 -VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNL 831
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 146/317 (46%), Gaps = 11/317 (3%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
S PD ++ ++I GL + D +S+ + P++ +N+++D L K DI AR
Sbjct: 533 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 592
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ ++A G+ + TY L+ G C + + F L + M + G+ P++ +Y+ L
Sbjct: 593 NVF-NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651
Query: 126 LCKNGKVGRARSLMSDM---EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G + +A L+ +M + +F+ L+ +CK + L LL G VP+
Sbjct: 652 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 711
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+TI ++ L G++ + I E ++ + +M +G +P +D + +
Sbjct: 712 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDM 770
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +C+ G LD AL + + + +Y ++ LC G++ + L +L+ M+
Sbjct: 771 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD---- 826
Query: 303 GSKGRISPYNSVLYGLY 319
+G + P L G++
Sbjct: 827 -KRGNLQPTLVALLGIF 842
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/559 (25%), Positives = 249/559 (44%), Gaps = 77/559 (13%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
+SP + + + GR + D + ++ M PS++ N++L L++ D
Sbjct: 172 RSPAVLDVLVDTYKKSGR---VQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALL 228
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
R+ M+ +G+ D YTY+ L++ C K+L M+ RG N+V YN LI
Sbjct: 229 WKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG 288
Query: 126 LCKNGKVGRARSLMSDMEE---------------------------------------PN 146
LC++G V A DME+ PN
Sbjct: 289 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPN 348
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
V ++ LI + +E N A ++++ + G P+ +T ++ LC +G++ A +L+
Sbjct: 349 VVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLK 408
Query: 207 ESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ R K R L EME G PNV TY+I+I C++G
Sbjct: 409 QMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSG 468
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ A D+ +M G+ N Y LI G C G + +I M +K + P
Sbjct: 469 EPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKM------TKVNVLP 522
Query: 311 ----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
YNS+++GL + + +E+ +Y QM++ L P S I G+ +G++E A++
Sbjct: 523 DLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLV 582
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M++ G PN VIY L+ +Y + + + + S K M G + + ++ L
Sbjct: 583 QRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSS 642
Query: 425 GNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
GN+ A ++ + GI + GS+P YS LI LC+ + A +L +M KG+ P+
Sbjct: 643 GNMEAAFRV----LSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPN 698
Query: 484 YLTWNSLL--ICLSQQTTW 500
+ +N+L+ +C S ++
Sbjct: 699 IVCYNALIDGLCKSGDISY 717
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 254/546 (46%), Gaps = 65/546 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL ++R N+ D +S + P++ ++ +++D ++E + AF
Sbjct: 312 PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG-NADEAFK 370
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVG----------------------------- 98
K+M+A+GVQ + TY L++GLC ++
Sbjct: 371 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 430
Query: 99 ------DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
D F+LL M++ G+ PN Y+ +IH LC++G+ +A L+ +M +PN
Sbjct: 431 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 490
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI YC+E N+ A + +K +PD+ ++ L VGRV ++ + +
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550
Query: 209 GEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G L G ++ + ++ M G PN Y L+ SY ++ +
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ F M G+ + Y LI L S G ++ ++L +E K GS + Y+
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE--KNGSVPDVHVYS 668
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ GL + +++A L +M K + P V + I G C G++ A+ F+ ++ +
Sbjct: 669 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 728
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G VPN V Y LI C+ + A L EM G P A ++ + +G G++ A
Sbjct: 729 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 788
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ L+EE M G S+ ++ L+ C++G Q LL ++G+G++P+ LT ++
Sbjct: 789 MFLIEE-MFLRGHASI---SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 844
Query: 491 LICLSQ 496
+ LS+
Sbjct: 845 ISGLSE 850
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 203/490 (41%), Gaps = 59/490 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R D + + ++P++ ++ ++ L + +
Sbjct: 417 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 476
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G++ + + YA L+ G C V ++ M V P+ YN+LI L K
Sbjct: 477 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 536
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V + + M+E PN+ T+S LI Y K +L +A L+++ G P+ V
Sbjct: 537 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 596
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEME 228
+LE + + +QG + G ++ R L +E
Sbjct: 597 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G +P+V Y+ LIS C+T + A + ++M G+ N V Y+ LI GLC G I
Sbjct: 657 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 716
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ +NS+L + L P V + I
Sbjct: 717 YARNV-----------------FNSIL------------------AKGLVPNCVTYTSLI 741
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G++ +A +++M+ G P+ +Y L + +A L++EM G+
Sbjct: 742 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 801
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
I S+FN ++ G C++G + LKL+ M GRG +P + +I L E G
Sbjct: 802 SI-SSFNNLVDGFCKRGKMQETLKLLHVIM---GRGLVPNALTIENIISGLSEAGKLSEV 857
Query: 469 SMLLVQMVGK 478
+ V++ K
Sbjct: 858 HTIFVELQQK 867
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 227/540 (42%), Gaps = 67/540 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKE-DIDLA 64
P+ + +I GL ++ + KA+DL+ + P+ ++ ++ +E ++ LA
Sbjct: 452 PNVYTYSIMIHGLCQS---GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 508
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ KM V D Y Y L+ GL RV + K M+ RG+ PN Y+ LIH
Sbjct: 509 CEIF-DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIH 567
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
KNG + A L+ M + PNDV + L+ +Y K +++ + G +
Sbjct: 568 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 627
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FL 224
D ++ L S G + A +L + G + V G C+ L
Sbjct: 628 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 687
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM +KG PN+ YN LI C++G + A +VFN + G+ N VTY +LI G C
Sbjct: 688 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 747
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
G I + + M + I+P Y+ + G ++A+ +++M L
Sbjct: 748 GDISNAFYLYNEMLATG------ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGH 800
Query: 341 AVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ---------- 388
A S L GFC G +++ + ++ G VPN + + +I +
Sbjct: 801 ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 860
Query: 389 ---------EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
E R S L +M G +P+ + ++ C++GN+ AL L +
Sbjct: 861 FVELQQKTSESAARHFSSLFMDMINQGKIPL-DVVDDMIRDHCKEGNLDKALMLRDVI-- 917
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
+ + + G Y ++ LC KG A LL +M +GI P + N LI L+ T
Sbjct: 918 -VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP---SENQCLILLTNLHT 973
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 195/449 (43%), Gaps = 58/449 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
P+E + +I G + D+ A LV R + P+ I+ +L+ K +DI+
Sbjct: 557 PNEFTYSGLIHGYLKN---GDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKV 613
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + K M+ GV D+ Y IL+ L + + F++L ++ G P+ +Y++LI
Sbjct: 614 SSTF-KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLIS 672
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK +A ++ +M +PN V ++ LI CK ++ A + + G VP
Sbjct: 673 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 732
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ VT T +++ C VG + +A + EM G P+ Y+
Sbjct: 733 NCVTYTSLIDGSCKVGDISNAFYLY-------------------NEMLATGITPDAFVYS 773
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--- 297
+L + G L+ A+ + +M + G + + +++ L+ G C G++ + LK+L ++
Sbjct: 774 VLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGR 832
Query: 298 ---------EDSKEG--SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
E+ G G++S +++ L ++ + A + LF +++
Sbjct: 833 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAA----RHFSSLFMDMINQGK 888
Query: 347 --------KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
I C +GN++ A D ++ + Y ++ C++ ++ EA L
Sbjct: 889 IPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNL 948
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+KEM G P + +L+ L G +
Sbjct: 949 LKEMDKRGICPSENQCLILLTNLHTSGYI 977
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 6/296 (2%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
S PD ++ ++I GL + D +S+ + P++ +N+++D L K DI AR
Sbjct: 660 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 719
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ ++A G+ + TY L+ G C + + F L + M + G+ P++ +Y+ L
Sbjct: 720 NVF-NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778
Query: 126 LCKNGKVGRARSLMSDM---EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G + +A L+ +M + +F+ L+ +CK + L LL G VP+
Sbjct: 779 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 838
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+TI ++ L G++ + I E ++ + +M +G +P +D + +
Sbjct: 839 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDM 897
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
I +C+ G LD AL + + + +Y ++ LC G++ + L +L+ M+
Sbjct: 898 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD 953
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 145/522 (27%), Positives = 247/522 (47%), Gaps = 34/522 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + T++ GL ++ M+ D + + + ++P + FNS+LD L KE L
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+ + G + + TY+ L+ GL ++ + +LL M G + N+V Y+T++ L K
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A ++ M + P+ VT++ LI + K + L A+ LL + GF P VVT
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T + LC GR +AVEIL+ +G + G+V + ++M
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710
Query: 229 RKGCL-PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R + P+V Y+ LI C+ G +D A + M G + VT+ LI GLC GRI
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D GL++ M ++ G K I YN+++ + + A L++M+ + V
Sbjct: 771 DTGLELFCGM--AERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHG 828
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I C + +++A F + E+ + + Y+ LI + R +A EL++ M
Sbjct: 829 IVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRRSEQALELLRAMVAD 886
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P A + TV+ GL + G+ A KL++E MR RG P Y+ +I L +
Sbjct: 887 GGSPDACNYMTVMDGLFKAGSPEVAAKLLQE-MR--SRGHSPDLRTYTIMISGLSKAKQL 943
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT--TWLLL 503
A +M+ K + PD + ++SL+ C + + W LL
Sbjct: 944 PLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL 985
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 210/432 (48%), Gaps = 33/432 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+K + G + TY+ ++ GLC N V G KLL M RG PN+V YNTL+++L
Sbjct: 25 RKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQ 84
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A SL+ M P +TF ++I CKE + A ++++ GFVPDV
Sbjct: 85 GRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIH 144
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
T +L LC +GRV +A ++ G + G+++ L+ +
Sbjct: 145 TVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAE 204
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
P V T+ I + + G L A + F+ M G+S N VTYD LI GLC G++D
Sbjct: 205 SFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDI 264
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL 349
L +L+ + S+ + ++S+L+GL + ++ +EA++ LK M P V + +
Sbjct: 265 ALGLLR-----DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM-PCVPNVVCFNSLMN 318
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS---ELMKEMTGHG 406
G C V++A FD M E G +V+ Y+ L+ C+ R+ EA ELM+ G
Sbjct: 319 GLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCS 378
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P TF+T++ GLC G V A + V E M + G P Y+ L++ LC+ G +
Sbjct: 379 --PNVVTFSTLIQGLCNAGRVNQAWE-VYERMVAV-EGISPNRFTYAFLLEGLCKAGDSR 434
Query: 467 SASMLLVQMVGK 478
QM+ +
Sbjct: 435 RLEQCFEQMLER 446
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 253/532 (47%), Gaps = 58/532 (10%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
S P F + GL +A + + D + + ++P+ +++++D L K +D+A
Sbjct: 207 SSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIAL 266
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
R K +G+ + ++ L+ GLC +R+ + +LL M PN V +N+L++
Sbjct: 267 GLLRDKNSQAGM----FAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNG 319
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLE-KSFSFGFVP 180
LC+ +V A L M+E + +T++IL+ CK + A +E + G P
Sbjct: 320 LCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSP 379
Query: 181 DVVTITKVLELLCSVGRVMDAVEILE-----ESGEQGRLGK---VKGGCR---------- 222
+VVT + +++ LC+ GRV A E+ E E R ++G C+
Sbjct: 380 NVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQC 439
Query: 223 FLKEMERKG--------------------CLPNVDTYNILISSYCETGVLDSALDVFNDM 262
F + +ER+ C P + TYN L++ ++G++ AL + M
Sbjct: 440 FEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFM 499
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G+S + +T+++++ GLC RI D + + + G + + Y++++ GL +
Sbjct: 500 IESGLSPDVITFNSVLDGLCKEQRILDAHNVFK--RALERGCRPNVVTYSTLIDGLSKMA 557
Query: 323 QQDEALEYLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DEAL+ L +M +L RA V S + G G +EDA QM + G +P+ V Y+
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYN 617
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI + + +R+REA L++EM G+ P T+ T+ GLCR G A+++++
Sbjct: 618 TLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD---YM 674
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
RG P + YS ++ LC+ G A +M ++ ++ S LI
Sbjct: 675 AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALI 726
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 213/484 (44%), Gaps = 36/484 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ TV+ GL + + D V + P +N+++D K ++M+
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 640
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+G TY L GLC + R + ++L M +RG PN++ Y++++ LCK G+V
Sbjct: 641 EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 700
Query: 134 RARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A M P+ + +S LI CK + A LE+ G +PDVVT + +
Sbjct: 701 EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSIL 760
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC GR+ +E+ C M +GC ++ YN +I++YC
Sbjct: 761 INGLCDAGRIDTGLELF---------------C----GMAERGCKADIYAYNAMINAYCL 801
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G +A + +MK GI+ N VT+ +I+ LC RID+ + + E + I
Sbjct: 802 KGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI---PEDCRDEI 858
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
S YN+++ L + ++ALE L+ M + P A + + G G+ E A + +
Sbjct: 859 S-YNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQE 917
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M G P++ Y +I + +++ A + +EM P A +++++ C+
Sbjct: 918 MRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADK 977
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
V A KL+ G P YS ++ +LC+ G A ++ +M K P
Sbjct: 978 VDDAWKLLRSS------GIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHI 1031
Query: 487 WNSL 490
W SL
Sbjct: 1032 WTSL 1035
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 224/504 (44%), Gaps = 43/504 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD I ++ L +++ V TP +N+++D L K A
Sbjct: 139 PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMV 198
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + S +T+ I + GL + ++ M GV PN+V Y+ LI LCK
Sbjct: 199 LQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCK 258
Query: 129 NGKVGRARSLMSDM-EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
GK+ A L+ D + FS L+ C+ L A+ LL+ + VP+VV
Sbjct: 259 AGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLK---AMPCVPNVVCFNS 315
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER-K 230
++ LC RV +A E+ + E G +L ++ R ++ M R +
Sbjct: 316 LMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTE 375
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLIRGLCSGGRIDD 289
GC PNV T++ LI C G ++ A +V+ M ++GIS N TY L+ GLC G D
Sbjct: 376 GCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAG---D 432
Query: 290 GLKILQLMED--SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
++ Q E +E P +S +++L ++ P V +
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHS------------PEVDFL-MVQVCRPTLVTYNTL 479
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G G V DA + MIE G P+V+ ++ ++ C+E+R+ +A + K G
Sbjct: 480 VTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 539
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T++T++ GL + + AL+L+ + + G + YS ++ L + G +
Sbjct: 540 RPNVVTYSTLIDGLSKMAKMDEALQLLA---KMVELGCRANTVTYSTVVDGLLKVGRMED 596
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A ++L QM G LPD +T+N+L+
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLI 620
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 152/351 (43%), Gaps = 32/351 (9%)
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VT+++LI CK + +A K+ FGF P VVT + V++ LC
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLC-------------- 47
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
R +V GC+ L+EM +GC PN TYN L+++ G A + M +G
Sbjct: 48 -----RDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGC 102
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+T+ +I+GLC G I+ +++ M D G + + +L+ L + DEA
Sbjct: 103 PPELITFGLIIKGLCKEGEIEAAFRVVDEMVD--RGFVPDVEIHTVLLHALCELGRVDEA 160
Query: 328 LEYLKQ--MEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+ +Q + P AV + + G G +E A + E P V + +
Sbjct: 161 WFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDG 220
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+ + A E M G P T++ ++ GLC+ G + AL L+ + + S
Sbjct: 221 LSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD------KNS 274
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G +S L+ LC+ + A LL M +P+ + +NSL+ L Q
Sbjct: 275 QAGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQ 322
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 143/299 (47%), Gaps = 20/299 (6%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN+LI+ C+ G + A F G VTY T+I GLC +D G K+L+ M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ G YN+++ L + + EA L++M P + L I G C +G
Sbjct: 63 --AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+E A R D+M++ G VP+V I+ L+HA C+ RV EA +++ G+ P A T+N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 416 TVLSGLCRQGNV---GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T++ GL + G + G L+L+ E S P ++ + L + G A
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESF------SSPTVFTFTIAVDGLSKAGNLTGAYEFF 234
Query: 473 VQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNE-----MVSFVMVVHELSAKEK 524
M G+ P+ +T+++L+ +C + + L LL ++ M +F ++H L +
Sbjct: 235 DSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHR 293
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 186/420 (44%), Gaps = 71/420 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNM-TPSLKIFNSILDVLVKED-IDLARA 66
P+ + +++ GL +A + + + + ++R + P + +++++D L K ID A
Sbjct: 681 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYE 740
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F ++M+ +G D T++IL+ GLC R+ G +L M RG K + YN +I++
Sbjct: 741 FL-ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAY 799
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP-- 180
C G+ A +L+ +M+ N VT I+I A C + + A+ F +P
Sbjct: 800 CLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSY------FHSIPED 853
Query: 181 --DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
D ++ ++ L + R A+E+L G + G + +
Sbjct: 854 CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAK 913
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+EM +G P++ TY I+IS + L A D F +M + + + Y +LI C
Sbjct: 914 LLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFC 973
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
++DD K+L+ G + I+ Y++++ L + D+ALE +++M+
Sbjct: 974 KADKVDDAWKLLR-----SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMK------- 1021
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+K C P + I+ L AY E RV EA +L+ ++
Sbjct: 1022 -----------------SKNC---------EPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D+ +Y L+ L + R +LL M + G P++ Y T++ L K G A L+
Sbjct: 856 DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915
Query: 140 SDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+M P+ T++I+I K + L A E+ PD + + +++ C
Sbjct: 916 QEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKA 975
Query: 196 GRVMDAVEILEESGEQ----------GRLGKVKG---GCRFLKEMERKGCLPNVDTYNIL 242
+V DA ++L SG + L K +G ++EM+ K C P + + L
Sbjct: 976 DKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSL 1035
Query: 243 ISSYCETGVLDSALDVFNDMK 263
++Y G +D A+ + ND++
Sbjct: 1036 ATAYVAEGRVDEAVKLVNDLQ 1056
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+V Y+ LI+ C+ RV +A ++ G+ P T++TV+ GLCR V KL+E
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
E GRG P + Y+ L+ AL +G + A LL +M G P+ +T+ ++ L
Sbjct: 61 E---MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLC 117
Query: 496 QQ 497
++
Sbjct: 118 KE 119
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +I GL +A+ + + + R N+ P +++S++D K D +D A
Sbjct: 925 PDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL 984
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R +SG++ Y+ ++ LC +++ MKS+ +P I+ +L +
Sbjct: 985 LR----SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYV 1040
Query: 128 KNGKVGRARSLMSDME 143
G+V A L++D++
Sbjct: 1041 AEGRVDEAVKLVNDLQ 1056
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 238/518 (45%), Gaps = 39/518 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP F ++ + + + + V+ + + F + P++ N +L+ L
Sbjct: 50 MHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN----ILINSFCHLN 105
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G Q D T+ L++GLC+ ++G+ L M G +PN V Y
Sbjct: 106 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYG 165
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ ME +P+ V ++ +I + CK+ + A L +
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 225
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD+ T T ++ LC+ L + K L +M LP+V
Sbjct: 226 GISPDIFTYTSLVHALCN-------------------LCEWKHVTTLLNQMVNSKILPDV 266
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
++ ++ + C+ G + A ++ + M G+ + VTY TL+ G C +D+ +K+ +
Sbjct: 267 VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 326
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M ++G + Y +++ G + ++ D+A+ ++M ++ P + + G C
Sbjct: 327 M--VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHV 384
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++DA F +M+ G +P++V Y L+ + C+ + EA L+K + P +
Sbjct: 385 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G+CR G + A L +G P Y+ +I LC++G A+ L ++
Sbjct: 445 NIIIDGMCRAGELEAARDLFSNLS---SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501
Query: 475 MVGKGILPDYLTWNSLLICLSQQT-TWLLLLLLNEMVS 511
M G PD T+N++ Q T + LL EM++
Sbjct: 502 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 539
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 27/304 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
PD IF TV+ L + + + + D++ + + P + + +++D ++ ++D A
Sbjct: 264 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 323
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ G D +Y L+ G C +++ L M + P++ YNTL+H LC
Sbjct: 324 F-DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLC 382
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A +L +M + P+ VT+SIL+ + CK +L A+ LL+ + PD+
Sbjct: 383 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQ 442
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+++ +C G + A ++ +G + G + + EM
Sbjct: 443 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 502
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ C P+ TYN + + + A+ + +M G S + T L+ L
Sbjct: 503 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLS----- 557
Query: 288 DDGL 291
DDGL
Sbjct: 558 DDGL 561
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++DA F++++ P++V + L+ + + + L +M G P T N
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++ C VG A ++ + ++ G P ++ LI+ LC +G A L +M+
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILK---LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMI 153
Query: 477 GKGILPDYLTWNSLL 491
+G P+ +T+ +L+
Sbjct: 154 DEGFQPNVVTYGTLI 168
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 157/582 (26%), Positives = 272/582 (46%), Gaps = 64/582 (10%)
Query: 34 TDLVSRF-------NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYA 85
TD V RF P++ +N ++D + KE DI+ AR + ++M G+ D TY
Sbjct: 114 TDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLF-EEMKFRGLIPDTVTYN 172
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
++ G R+ D MKS +P+ + YN+LI+ CK+GK+ + +M++
Sbjct: 173 SMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQS 232
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN V++S L+ A+CKE+ + A+ G VP+ T T +++ C +G + DA
Sbjct: 233 GLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDA 292
Query: 202 VEILEESGEQG-------RLGKVKGGC--RFLKEMER-------KGCLPNVDTYNILISS 245
+ E E G + G C +KE E+ G +PN+ +YN LI
Sbjct: 293 FRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHG 352
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ + +D AL++ N++K GI + + Y T I GLC +I+ ++ M+++ G K
Sbjct: 353 FVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQEN--GIK 410
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV--DG-----NVE 358
Y +++ ++ E L L++M++L D + ++ FCV DG V
Sbjct: 411 ANTLIYTTLMDAYFKSGNPTEGLHLLEEMQEL-----DHEVTVVTFCVLIDGLCKNKLVS 465
Query: 359 DAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
A F +M + G+ PN +Y +I C+E +V+ A+ L ++M G +P + + ++
Sbjct: 466 KAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSL 525
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ G +QGN+ AL L + M IG + L Y+ L+ + Q A L +M+
Sbjct: 526 MDGNLKQGNMLEALAL-RDKMAEIGMKLDLLA---YTSLVWGFSQCNQLQKARSFLEEMI 581
Query: 477 GKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSF--VMVVHELSAKEKRCKL-----R 529
G+ ILPD ++C+ L ++E V ++ H+L + L
Sbjct: 582 GEEILPDE------VLCIGVLKKHYELGCIDEAVGLQSYLMKHQLLTSDNNNALPNYSDP 635
Query: 530 SLNHLAHGAGSVW-LGLRIHDTTHTFIIDRRVEIGHVFCSSS 570
SL+ VW L + TH I+ R G ++CSS+
Sbjct: 636 SLDFFEEHRNRVWDLQSELLLRTHQLIV-RGEAYGWIYCSSA 676
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 170/391 (43%), Gaps = 65/391 (16%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
MK V P + N L+H K GK + DM +P T++I+I KE +
Sbjct: 89 MKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGD 148
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A L E+ G +PD VT +++ VGR+ D V
Sbjct: 149 IEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV-------------------Y 189
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F +EM+ C P+V TYN LI+ +C++G L L+ + +MK G+ N V+Y TL+ C
Sbjct: 190 FFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFC 249
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPR 340
+E+ +A+++ M ++ P
Sbjct: 250 -------------------------------------KEDMMQQAIKFYVDMRRVGHVPN 272
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + C GN+ DA R ++M+E G NVV Y LI C ER++EA +L
Sbjct: 273 EFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFG 332
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G +P +++N ++ G + N+ AL+L+ E GRG P Y I LC
Sbjct: 333 KMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK---GRGIQPDLLLYGTFIWGLC 389
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++A +++ +M GI + L + +L+
Sbjct: 390 GLEKIEAAKVVMNEMQENGIKANTLIYTTLM 420
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 173/407 (42%), Gaps = 61/407 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + T++ + M+ +K + R P+ + S++D K +L+ AF
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIG-NLSDAFR 294
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ GV+ + TY L+ GLC R+ + KL M + GV PN YN LIH
Sbjct: 295 LANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFV 354
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + RA L+++++ +P+ + + I C E + A V++ + G + +
Sbjct: 355 KAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTL 414
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G + + +LEE ++E++ + V T+ +LI
Sbjct: 415 IYTTLMDAYFKSGNPTEGLHLLEE----------------MQELDHE---VTVVTFCVLI 455
Query: 244 SSYCETGVLDSALDVFNDMKID-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ ++ A+D F M D G+ N Y +I GLC ++ + + M ++E
Sbjct: 456 DGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQM--AQE 513
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G + Y S++ G LKQ GN+ +A
Sbjct: 514 GLVPDRTAYTSLMDG------------NLKQ---------------------GNMLEALA 540
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
D+M E G +++ Y L+ + Q ++++A ++EM G LP
Sbjct: 541 LRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILP 587
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 132/281 (46%), Gaps = 9/281 (3%)
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
LG ++ + +M+R P + N L+ + + G D F DM G T
Sbjct: 76 LGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFT 135
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y+ +I + G I+ + + M+ G YNS++ G + + D+ + + ++
Sbjct: 136 YNIMIDCMWKEGDIEAARGLFEEMK--FRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 334 MEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M+ + P + + I FC G + + +M + G PNVV Y L+ A+C+E+
Sbjct: 194 MKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDM 253
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSG 450
+++A + +M G++P T+ +++ C+ GN+ A +L E + G+ +
Sbjct: 254 MQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVT--- 310
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI LC+ + A L +MV G++P+ ++N+L+
Sbjct: 311 -YTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALI 350
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R C+P ++ L S + G+L+ A F+ MK + + + L+ G+ D
Sbjct: 56 RNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 115
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
+ + M + GSK + YN ++ +++E + A ++M+ L P V +
Sbjct: 116 GVKRFFKDMIGA--GSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNS 173
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+ G ++D F++M P+V+ Y+ LI+ +C+ ++ + E +EM G
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSG 233
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P +++T++ C++ + A+K DMR +G +P Y+ L+ A C+ G
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQAIKFY-VDMRRVGH--VPNEFTYTSLVDANCKIGNLS 290
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A L +M+ G+ + +T+ +L+
Sbjct: 291 DAFRLANEMLEVGVEWNVVTYTALI 315
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 3/140 (2%)
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +E+A +CF +M P + L+H + + + K+M G G P T+
Sbjct: 77 GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTY 136
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ + ++G++ A L EE M+ RG +P + Y+ +I + G +
Sbjct: 137 NIMIDCMWKEGDIEAARGLFEE-MK--FRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEE 193
Query: 475 MVGKGILPDYLTWNSLLICL 494
M PD +T+NSL+ C
Sbjct: 194 MKSMSCEPDVITYNSLINCF 213
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 230/478 (48%), Gaps = 29/478 (6%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
V R + ++ N +++ L K+ D ++F +M +G+ D TY L+ C
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFL-SEMEGNGIYADMVTYNTLIGAYCREG 167
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
+ + F++++ M +G+KP+ YN +I+ LCK G+ RA+ ++ +M P+ T++
Sbjct: 168 LLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYN 227
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
L+ C+ +N A + + G VPD+V+ + ++ + + A+ + +
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G R G + + EM +GC+ +V YN +++ C+ +L A
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+F++M G +F T+ TLI G C G + L + M ++ K I YN+++
Sbjct: 348 DKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM--TQRNIKPDIVAYNTLI 405
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G + + ++A E M K+FP + + I +C G+V +A R +D MIE+G
Sbjct: 406 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P +V + +I YC+ +A E + M G P ++NT+++G R+ N+ A
Sbjct: 466 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLW 525
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + + G LP Y+ ++ C +G Q A ++L +M+ KGI PD T+ +L+
Sbjct: 526 INKMEK---EGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALI 580
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 232/508 (45%), Gaps = 29/508 (5%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
+F +IR +AR + + +A ++ S+ NS+L LVK D ++LA +R+
Sbjct: 50 VFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE- 108
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ SG++ + YT I++ LC + D L M+ G+ + V YNTLI + C+ G
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A +M+ M + P+ T++ +I CK+ A +L + + G PD T
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNT 228
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
+L C +A EI E QG R + + ++M++ G
Sbjct: 229 LLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFG 288
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
+P+ Y +L+ YC G + AL + ++M G + + Y+T++ GLC + D
Sbjct: 289 LVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDAD 348
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
K+ M + G+ + ++++G ++ +AL M + + P V + I
Sbjct: 349 KLFDEM--VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC G +E A +D MI PN + Y LI+AYC V EA L M G P
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 466
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T NTV+ G CR G+ A + + R I +G P Y+ LI + A
Sbjct: 467 TLVTCNTVIKGYCRSGDSSKADEFLG---RMIAKGVAPDHISYNTLINGFVREDNMDKAF 523
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ + +M +G+LPD +T+N ++ +Q
Sbjct: 524 LWINKMEKEGLLPDIITYNVVMNGFCRQ 551
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 190/440 (43%), Gaps = 68/440 (15%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEEN 162
+L +++ GV V+ L+ S+C N N++ F +LI Y +
Sbjct: 18 ILRMIRRSGVSRVEVV-EALVSSMCGNCGT-------------NNLVFDLLIRTYVQARK 63
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------- 212
L S G++ + +L L + V A E+ E G
Sbjct: 64 LREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNI 123
Query: 213 ------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+ GK FL EME G ++ TYN LI +YC G+L+ A ++ N M G
Sbjct: 124 MVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKG 183
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLM----------------------------- 297
+ + TY+ +I GLC GR IL M
Sbjct: 184 LKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAK 243
Query: 298 ----EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
E ++G + ++S++ R D+AL Y + M+K L P V ++ + G+
Sbjct: 244 EIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY 303
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C +GN+ +A + D+M+E+G V +V+ Y+ +++ C+E+ + +A +L EM G LP
Sbjct: 304 CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDF 363
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
TF T++ G C+ GN+ AL L + R P Y+ LI C+ G + AS L
Sbjct: 364 YTFTTLIHGHCQDGNMTKALSLFGTMTQ---RNIKPDIVAYNTLIDGFCKVGEMEKASEL 420
Query: 472 LVQMVGKGILPDYLTWNSLL 491
M+ + I P+++T+ L+
Sbjct: 421 WDGMISRKIFPNHITYGILI 440
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 159/376 (42%), Gaps = 27/376 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F ++I R R ++ + + +F + P I+ ++ + L
Sbjct: 256 PDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 315
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R +M+ G D Y ++ GLC + D KL M RG P+ + TLIH C+
Sbjct: 316 RDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQ 375
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + +A SL M + P+ V ++ LI +CK + A L + S P+ +T
Sbjct: 376 DGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 435
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ CSVG V +A R M KG P + T N +I
Sbjct: 436 YGILINAYCSVGHVSEAF-------------------RLWDVMIEKGIKPTLVTCNTVIK 476
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC +G A + M G++ + ++Y+TLI G +D + ME KEG
Sbjct: 477 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKME--KEGL 534
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN V+ G R+ + EA L++M + + P + I G N+ +A R
Sbjct: 535 LPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFR 594
Query: 363 CFDQMIEEGGVPNVVI 378
D+M++ G P+ V
Sbjct: 595 FHDEMLQRGFAPDDVF 610
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N + +D LIR ++ +G + +++ +G I+ NS+L GL + + + A E
Sbjct: 47 NNLVFDLLIRTYVQARKLREGTEAFRILR--SKGYLVSINACNSLLGGLVKIDWVELAWE 104
Query: 330 YLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+++ + +L I+ C DG +D K +M G ++V Y+ LI AYC
Sbjct: 105 VHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYC 164
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+E + EA E+M M G P T+N +++GLC++G A ++ E M IG P
Sbjct: 165 REGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE-MLNIGLS--P 221
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ Y+ L+ C + F A + +M+ +G++PD ++++SL+ S+
Sbjct: 222 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRN 271
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 199/390 (51%), Gaps = 24/390 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ + V+ D YTY L++GLC R + +L M R P+ V Y L+ + CK
Sbjct: 20 RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCK 79
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+A L+ +M + P+ VT+++++ C+E + +A+ L+ S+G P+ V+
Sbjct: 80 RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 139
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
VL+ LC+ R DA E++ E G++G R G V+ L+++
Sbjct: 140 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 199
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ GC PN +YN L+ ++C+ +D A+ + M G + V+Y+TL+ LC G +D
Sbjct: 200 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 259
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+++L ++D +G + YN+V+ GL + + EALE L +M + L P + S
Sbjct: 260 VAVELLHQLKD--KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 317
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
G C + +EDA R F ++ + G PN V+Y+ +I C+ A +L M G+G
Sbjct: 318 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 377
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+P ST+ ++ GL +G + A L++E
Sbjct: 378 CMPNESTYTILIEGLAYEGLIKEARDLLDE 407
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 200/419 (47%), Gaps = 41/419 (9%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
Y ++ G C ++ +L+ M V+P++ YNTLI LC G+ A +++ +M
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
P+ VT++IL+ A CK A+ LL++ G PD+VT V+ +C GRV
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
DA+E FLK + GC PN +YNI++ C + A ++
Sbjct: 119 DDAIE-------------------FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEEL 159
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+M G N VT++ LI LC G ++ L++L+ + K G YN +L+
Sbjct: 160 MGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI--PKYGCTPNSLSYNPLLHAF 217
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
++ + D+A+ +L M +P V + + C G V+ A Q+ ++G P +
Sbjct: 218 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 277
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ Y+ +I + + +EA EL+ EM G P T++T+ +GLCR+ + E+
Sbjct: 278 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI-------ED 330
Query: 437 DMRGIGR----GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G+ G P + Y+ +I LC++ SA L M+G G +P+ T+ L+
Sbjct: 331 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 176/352 (50%), Gaps = 29/352 (8%)
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+ ++ ++ YC L A L+ + PD T ++ LC GR +A+ +L+E
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAE---MPVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
M R+ C+P+V TY IL+ + C+ A+ + ++M+ G
Sbjct: 58 -------------------MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGC 98
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ + VTY+ ++ G+C GR+DD ++ L+ + G + YN VL GL + ++A
Sbjct: 99 TPDIVTYNVVVNGICQEGRVDDAIEFLKNL--PSYGCEPNTVSYNIVLKGLCTAERWEDA 156
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E + +M + P V ++ I C G VE A +Q+ + G PN + Y+ L+HA
Sbjct: 157 EELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 216
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+C+++++ +A + M G P ++NT+L+ LCR G V A++L+ + +G
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK---DKGC 273
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P Y+ +I L + G + A LL +MV KG+ PD +T++++ L ++
Sbjct: 274 APVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCRE 325
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 175/371 (47%), Gaps = 29/371 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + ++ + +K D + TP + +N +++ + +E +D A F
Sbjct: 65 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 124
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K + + G + + +Y I++KGLC R D +L+ M +G PN V +N LI LC
Sbjct: 125 L-KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLC 183
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G V A ++ + + PN ++++ L+ A+CK++ + A+ L+ S G PD+V
Sbjct: 184 RKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIV 243
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC G V AVE+L +++ KGC P + +YN +I
Sbjct: 244 SYNTLLTALCRSGEVDVAVELLH-------------------QLKDKGCAPVLISYNTVI 284
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ G AL++ N+M G+ + +TY T+ GLC RI+D ++ ++D G
Sbjct: 285 DGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM--G 342
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN+++ GL + + A++ M P ++ I G +G +++A+
Sbjct: 343 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 402
Query: 362 RCFDQMIEEGG 372
D++ G
Sbjct: 403 DLLDELCSRAG 413
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 146/291 (50%), Gaps = 21/291 (7%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
YN +++ YC G LD+A + +M ++ ++ TY+TLIRGLC GR + L +L M
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVEPDAY---TYNTLIRGLCGRGRTANALAVLDEM 58
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
+ + Y +L + + +A++ L +M + P V ++ + G C +G
Sbjct: 59 --LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 116
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+DA + G PN V Y+ ++ C ER +A ELM EM G P TFN
Sbjct: 117 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 176
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++S LCR+G V AL+++E+ + G P S Y+PL+ A C++ A L M
Sbjct: 177 MLISFLCRKGLVEPALEVLEQIPK---YGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 476 VGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
V +G PD +++N+LL L + E+ V ++H+L K+K C
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRS---------GEVDVAVELLHQL--KDKGC 273
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 25/260 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PP+ F +I L R ++ ++ + + ++ TP+ +N +L K+ +D A A
Sbjct: 169 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 228
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F M++ G D +Y L+ LC + V +LLH +K +G P + YNT+I L
Sbjct: 229 FL-DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 287
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K GK A L+++M +P+ +T+S + C+E+ + +A+ K G P+
Sbjct: 288 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 347
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V ++ LC A+++ M GC+PN TY IL
Sbjct: 348 VLYNAIILGLCKRRETHSAIDL-------------------FAYMIGNGCMPNESTYTIL 388
Query: 243 ISSYCETGVLDSALDVFNDM 262
I G++ A D+ +++
Sbjct: 389 IEGLAYEGLIKEARDLLDEL 408
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 137/490 (27%), Positives = 233/490 (47%), Gaps = 32/490 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID-LARAF 67
P +F T+ L M+ + + +++F + P ++ N +L L K LA +F
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K M+ +G+ +TY +++ L + L MK++G++P+ V YN+LI
Sbjct: 239 F-KDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYG 297
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A S+ +M+ EP+ +T++ LI +CK E + A L G P+VV
Sbjct: 298 KVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVV 357
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G +++A +F +M R G PN TY LI
Sbjct: 358 TYSTLIDAFCKAGMLLEAN-------------------KFFVDMIRVGLQPNEFTYTSLI 398
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G L+ A + ++M+ G++ N VTY L+ GLC GR+ + ++ + K G
Sbjct: 399 DANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGAL--LKAG 456
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
Y S+ +G + ++A++ L++M K L P + KI G C +ED+
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M++ G N IY LI AY + + EA L++EM G T+ ++ GL
Sbjct: 517 AVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGL 576
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ G V A++ + R G P Y+ LI LC+ + A L +M+ KGI
Sbjct: 577 CKIGLVQQAVRYFDHMTRN---GLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGIS 633
Query: 482 PDYLTWNSLL 491
PD L + SL+
Sbjct: 634 PDKLVYTSLI 643
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 212/459 (46%), Gaps = 34/459 (7%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P + +NS++D K + ++M +G + D TY L+ C R+ F
Sbjct: 282 LRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAF 341
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAY 157
+ LH MK RG++PN V Y+TLI + CK G + A DM +PN+ T++ LI A
Sbjct: 342 EYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDAN 401
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK +L A L + G ++VT T +L+ LC GR+ +A E+ G L K
Sbjct: 402 CKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELF------GALLKA 455
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
G N Y L Y + +++ A+D+ +M + + + Y T
Sbjct: 456 -------------GWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTK 502
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I GLC I+D + +++ M D + I Y +++ ++ + EA+ L++M+ L
Sbjct: 503 IWGLCRQNEIEDSMAVIREMMDCGLTANSYI--YTTLIDAYFKVGKTTEAVNLLQEMQDL 560
Query: 338 FPR--AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ V + I G C G V+ A R FD M G PN++IY LI C+ + + EA
Sbjct: 561 GIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEA 620
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L EM G P + +++ G + GN G AL L R + G Y+ L
Sbjct: 621 KNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRN---RMVEIGMELDLCAYTSL 677
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
I G Q A LL +M+ KGI+PD + L ICL
Sbjct: 678 IWGFSRYGQVQLAKSLLDEMLRKGIIPDQV----LCICL 712
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 187/425 (44%), Gaps = 34/425 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I + I + + + + P++ +++++D K + L +
Sbjct: 319 PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF 378
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ G+Q +++TY L+ C + + FKL M+ GV N V Y L+ LC+
Sbjct: 379 FVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCE 438
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G++ A L + + N ++ L Y K + + A+ +LE+ PD++
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+ LC + D++ ++ E + G ++GK L+EM+
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G V TY +LI C+ G++ A+ F+ M +G+ N + Y LI GLC ++
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKL---FPRA 341
+ + M D KG ISP Y S++ G + EAL +M ++
Sbjct: 619 EAKNLFNEMLD-----KG-ISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLC 672
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
SL I GF G V+ AK D+M+ +G +P+ V+ CL+ Y + + EA L +
Sbjct: 673 AYTSL-IWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDD 731
Query: 402 MTGHG 406
M G
Sbjct: 732 MARRG 736
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 166/420 (39%), Gaps = 65/420 (15%)
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALV 168
+P +++TL + L G + AR M + P + + L+ K AL
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALS 237
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
+ G P V T V+ G R G ++ +EM+
Sbjct: 238 FFKDMVVAGLSPSVFTYNMVI-------------------GCLAREGDLEAARSLFEEMK 278
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P++ TYN LI Y + G+L A+ VF +MK G + +TY++LI C RI
Sbjct: 279 AKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIP 338
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--------EKLFPR 340
+ L M+ + G + + Y++++ + EA ++ M E +
Sbjct: 339 QAFEYLHGMK--QRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396
Query: 341 AVDRSLKI-----------------------------LGFCVDGNVEDAKRCFDQMIEEG 371
+D + KI G C DG + +A+ F +++ G
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
N IY L H Y + + + +A ++++EM P + T + GLCRQ + ++
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ E M G S Y+ LI A + G A LL +M GI +T+ L+
Sbjct: 517 AVIREMMDC---GLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLI 573
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 231/490 (47%), Gaps = 40/490 (8%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKK 71
+F ++R R ++ K ++ + P ++ N +L + +K +++A Y +
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY-AE 217
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M + YT+ I++ LC ++ + + M+ G KPN V YNT+IH G
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ AR ++ M EP+ T+ LI CKE L A L +K G VP+ VT
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ C+ G + A + EM +KG +P+V TYN+L+ +
Sbjct: 338 LIDGYCNKGDLERAFS-------------------YRDEMVKKGIMPSVSTYNLLVHALF 378
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A D+ +M+ GI + +TY+ LI G G + M SKG
Sbjct: 379 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML-----SKG- 432
Query: 308 ISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
I P Y S++Y L R N+ EA + +++ + + P + + + G C +GNVE A
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M + P+ V ++ L+ C+E +V EA L+ EM G P ++NT++SG
Sbjct: 493 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 552
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
R+G++ A + V ++M IG P Y+ LIK LC+ A LL +MV KGI
Sbjct: 553 GRRGDIKDAFR-VRDEMLSIGFN--PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGIS 609
Query: 482 PDYLTWNSLL 491
PD T+ SL+
Sbjct: 610 PDDSTYLSLI 619
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 211/470 (44%), Gaps = 66/470 (14%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L++ C R + FK ++MK +G+ P N ++ K ++ A L ++M
Sbjct: 160 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 219
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
TF+I++ CKE L A + GF P+VV+ ++
Sbjct: 220 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH--------- 270
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
G R G ++G R L M KG P+ TY LIS C+ G L+ A +F
Sbjct: 271 ---------GYSSR-GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ N VTY+TLI G C+ G ++ M K+G +S YN +++ L+
Sbjct: 321 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM--VKKGIMPSVSTYNLLVHALF 378
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN--------------------- 356
E + EA + +K+M K + P A+ ++ I G+ GN
Sbjct: 379 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438
Query: 357 --------------VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+++A F++++++G P+V++++ ++ +C V A L+KEM
Sbjct: 439 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P TFNT++ G CR+G V A L++E R RG P Y+ LI +
Sbjct: 499 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKR---RGIKPDHISYNTLISGYGRR 555
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICL-SQQTTWLLLLLLNEMVS 511
G + A + +M+ G P LT+N+L+ CL Q L LL EMV+
Sbjct: 556 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 605
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 26/346 (7%)
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+ F +L+ C+ A G VP + T +L L + R M+ +L
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNR-MEMAWVL-- 214
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
EM R V T+NI+++ C+ G L A + M+ G
Sbjct: 215 ----------------YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 258
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N V+Y+T+I G S G I+ +IL M +G + Y S++ G+ +E + +EA
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRILDAMR--VKGIEPDSYTYGSLISGMCKEGRLEEA 316
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+M + L P AV + I G+C G++E A D+M+++G +P+V Y+ L+HA
Sbjct: 317 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 376
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
E R+ EA +++KEM G +P A T+N +++G R GN A L E + +G
Sbjct: 377 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE---MLSKGI 433
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ LI L + + A L +++ +G+ PD + +N+++
Sbjct: 434 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 479
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + T+I G GR I D + D + P+L +N+++ L K ++ DLA
Sbjct: 540 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 599
Query: 68 YRKKMMASGVQGDDYTYAILMKGL 91
K+M+ G+ DD TY L++G+
Sbjct: 600 L-KEMVNKGISPDDSTYLSLIEGM 622
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 257/522 (49%), Gaps = 47/522 (9%)
Query: 49 FNSILDVL--VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
FNSIL L V++ +AR + + AS V+ D TY IL+ GLC RVGD ++L
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCAS-VRPDVVTYGILVNGLCKAGRVGDALRVLDG 197
Query: 107 MKSRG--VKPNSVIYNTLIHSLCKNGKVGRARSL----MSDME--EPNDVTFSILICAYC 158
M + ++P+ V NT++ LCK+G+V A + MS + PN VT++ LI A+C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ N+ A L+EK + G ++VT+ ++ LC GR A+E E GK
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK-- 315
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
N TY+ L+ + T + A+++F++ +G S + + Y T+I
Sbjct: 316 ---------------GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GL GR++D + M+++ G K YN ++ G R+ + EA E L++M++
Sbjct: 361 SGLTQAGRLEDACSMASSMKEA--GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + + G C G+ +MI++G P+V+ + L+H YC+ ++ EA
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPL 455
+++ M G P +NT++ LC++G+V A++L +E + S+P + ++ L
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDE----MKEKSVPANVTTFNAL 534
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMV 515
+K L +K + A L+ QM + PDY+T + L+ WL ++ + + M
Sbjct: 535 LKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM-------EWLPVIGETDRLKRFMQ 587
Query: 516 VHELSAKEKRCKLRSLN--HLAHG-AGSVWLGLRIHDTTHTF 554
E +A ++ R+ H A G A + L R DT+ T
Sbjct: 588 QGEHTASKRIVSDRTSAYFHFATGLAETFTLHKRTLDTSPTL 629
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 190/425 (44%), Gaps = 33/425 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKED-IDLAR 65
PD + ++ GL +A + D ++ D +SR ++ P + N+++D L K + A
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 66 AFYRKKMMA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF ++M + G + TY L+ C + ++L+ M++ GV N V NT++
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 125 SLCKNGKVGRARSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC+ G+ G A + + N VT+S L+ A N+ A+ L + S G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PD + ++ L GR+ DA C M+ G +
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDA-------------------CSMASSMKEAGFKLDTKA 390
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNILI+ +C L A ++ +MK GI + TY+TL+ G C G ++L M
Sbjct: 391 YNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
D +G + + + ++++G + + DEAL L+ M++ + P V + I C G+
Sbjct: 451 D--DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGD 508
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V+ A FD+M E+ NV ++ L+ + +A ELM +M P T +
Sbjct: 509 VDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDV 568
Query: 417 VLSGL 421
++ L
Sbjct: 569 LMEWL 573
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I G R + +++ + + + P + +N++L K A
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
KM+ G Q T+ L+ G C ++ + ++L M G+ PN+VIYNTLI LCK
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G V A L +M+E N TF+ L+ + A L+++ PD VT+
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTV 566
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQ 211
++E L +G D ++ + GE
Sbjct: 567 DVLMEWLPVIGET-DRLKRFMQQGEH 591
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 207/430 (48%), Gaps = 37/430 (8%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA---- 135
+++TY L+ GLC ++ ++LL M+ RG+ P ++N +I LCK G+ G A
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDVVTITKVLELLCS 194
+++ P+ +TF+IL+ A K + A + E S +P+VVT T V+ LC
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G++ A+E+L+ M GC PNV TY++L+ C+ G D
Sbjct: 149 DGKLDRAIELLD-------------------LMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
+ +M G + + Y+TL+ GLC R+D+ L+++QLM + G + YNS+
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM--IRSGCYPTVVTYNSL 247
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ R Q D A ++ M + P ++ + I G C D ++DA+ QM+
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 373 VPNVVIYDCLIHAYCQEERV------REASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
VP+V+ Y +I C++ RV A E+++ M G P A T+ V+ GLCR
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
AL L+ R I +P +S +I +LC+ +A + M + P+ +
Sbjct: 368 SQQALALLR---RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVA 424
Query: 487 WNSLLICLSQ 496
+ +L+ LS+
Sbjct: 425 YAALIDGLSK 434
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/497 (27%), Positives = 220/497 (44%), Gaps = 38/497 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
PP ++ VIRGL +A D + V+ TP + FN ++D LVK ++ A
Sbjct: 62 PPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +S + TY ++ GLC ++ +LL +M G PN + Y+ L+ L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+ + +L+ +M +P+ + ++ L+ CK L AL L++ G P V
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT ++EL C R +V R ++ M +GC P+V YN +
Sbjct: 242 VTYNSLMELFC-------------------RSKQVDRAFRLIQVMSERGCPPDVINYNTV 282
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK------ILQL 296
I+ C LD A + M + +TY T+I GLC R+D K IL++
Sbjct: 283 IAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEM 342
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M+ + G Y V+ GL R + +AL L++M ++ P S+ I C
Sbjct: 343 MKQT--GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+++ A + F M E PN V Y LI + V +A + + M + P +T+
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATY 459
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+VL GLC G + A+++VE I + P Y LI+ LC + A L
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEG---MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516
Query: 475 MVGKGILPDYLTWNSLL 491
+ KG + +N L+
Sbjct: 517 VEAKGFAMEVGVYNVLV 533
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 196/407 (48%), Gaps = 33/407 (8%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
R G + + + + PN Y +LIH LCK GK+ +A L+ +M + P +
Sbjct: 10 RAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHN 69
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+I CK +AL + PD++T +++ L GRV +A +I E
Sbjct: 70 GVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTS 129
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ CLPNV TY +I+ C+ G LD A+++ + M G N
Sbjct: 130 SQ------------------CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNV 171
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+TY L+ GLC GR D G +LQ M ++ G + + YN++L GL + + DEALE +
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEM--TRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ M + +P V + + FC V+ A R M E G P+V+ Y+ +I C++
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL-----VEEDMRGIGRG 444
R+ +A L+K+M +P T++T++ GLC+ V KL + E M+ G
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT--G 347
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P +G Y+ +I+ LC Q A LL +M+ ++PD +++ ++
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVI 394
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 213/435 (48%), Gaps = 31/435 (7%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M S Q P+ + TVI GL + ++ ++ DL++ P++ ++ +++ L K
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
++M G Q D Y L+ GLC + R+ + +L+ +M G P V YN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+L+ C++ +V RA L+ M E P+ + ++ +I C++ L +A LL++ +
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305
Query: 177 GFVPDVVTITKVLELLCSVGRV---------MDAVEILEESGEQGRLGK----VKGGCR- 222
VPDV+T + +++ LC RV + +E+++++G G ++G CR
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365
Query: 223 --------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
L+ M +P++ +++++I S C++ LD+A +F M N V Y
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
LI GL GG +D +++ +LM +S + ++ YNSVL GL + +EA+ ++ M
Sbjct: 426 AALIDGLSKGGEVDKAVRVFELMVES---FRPGVATYNSVLDGLCGVGRIEEAVRMVEGM 482
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
++ FP I G C VE+A F + +G V +Y+ L++ C+++R+
Sbjct: 483 IHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRL 542
Query: 393 REASELMKEMTGHGY 407
+A + ++ GY
Sbjct: 543 SDAHGVANKLIEAGY 557
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 143/294 (48%), Gaps = 17/294 (5%)
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A+ +L +G+ G+ + +E ER C+PN TY LI C+ G LD A ++ +
Sbjct: 4 ALNLLVRAGQHGQ------AVQLFRE-ER--CVPNEFTYGSLIHGLCKAGKLDQAYELLD 54
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+M+ GI ++ +IRGLC GR D L + + +K I +N ++ L +
Sbjct: 55 EMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK--CTPDIITFNILVDALVK 112
Query: 321 ENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +EA + + M + P V + I G C DG ++ A D M E G PNV+
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y L+ C+ R + L++EMT G+ P +NT+L+GLC+ + AL+LV+
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G P Y+ L++ C A L+ M +G PD + +N+++
Sbjct: 233 IRS---GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 237/484 (48%), Gaps = 22/484 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + F ++ G + M+ + + + R L+ +N L LV+ L
Sbjct: 293 PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLA 352
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M+ G++ + Y++ +M GLC + D ++ +M S G+ P++V Y+TL+H C
Sbjct: 353 LKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCS 412
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV +A +++ +M PN T +IL+ + KE + A LL+K + D VT
Sbjct: 413 TGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVT 472
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER----KGCLPNVDTYN 240
V++ LC G++ +AVEI+E G G F+ ++ K CLP++ TY+
Sbjct: 473 CNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYS 532
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
I+I+ C+ G LD A F +M + + + YDT I C G+I ++L+ ME
Sbjct: 533 IIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDME-- 590
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
K G + YNS++ GL +NQ E L M++ + P + I C G ++
Sbjct: 591 KRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIK 650
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER---VREASELMKEMTGHGYLPIASTFN 415
DA D+M+++G PN+ + LI A+C+ V+E E+ + GH + FN
Sbjct: 651 DATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFN 710
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+L G G V A +L + + R G+ Y+ LI+ LC+ ++AS +L +M
Sbjct: 711 ELLIG----GEVSEAKELFDA---ALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKM 763
Query: 476 VGKG 479
+ KG
Sbjct: 764 IDKG 767
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 238/523 (45%), Gaps = 52/523 (9%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P + ++N +L+ ++ED + ++ K M+ +GV + YT +L+ GLC + R D ++
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
M +G +PN + L+ C+ G RA L+ M +PN V ++ LI ++C+
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
E A L+E+ G PDVVT + LCS G++++A I + LG +
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR- 292
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
PN+ T+N+++ +C+ G+L+ A + MK +G +Y+ +
Sbjct: 293 --------------PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLL 338
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
GL G++ + L+ M D +G + I +N+V+ GL + +A + M +
Sbjct: 339 GLVRNGKLLEAQLALKEMVD--KGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGI 396
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S + G C G V A +M+ G PN + L+H+ +E R+ EA +
Sbjct: 397 GPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEK 456
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--------------------D 437
L+++M Y T N V+ GLC+ G + A+++VE D
Sbjct: 457 LLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVD 516
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G+ LP YS +I LC+ G A ++MVGK + PD + +++ + +
Sbjct: 517 SSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKH 576
Query: 498 TTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGS 540
++ S V+ ++ + L++ N L G GS
Sbjct: 577 ---------GKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGS 610
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 238/507 (46%), Gaps = 39/507 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E F ++RG RA + ++ D + F + P+ I+N+++ +E +
Sbjct: 184 PNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERL 243
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDG---FKLLHVMKSRGV-KPNSVIYNTLIH 124
++M G+ D T+ + LC ++ + F+ + + + G+ +PN +N ++
Sbjct: 244 VERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLE 303
Query: 125 SLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + A++L+ M+ ++ +++I + + L+ A + L++ G P
Sbjct: 304 GFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEP 363
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
++ + V++ LC G + DA I+ G GKV L
Sbjct: 364 NIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNIL 423
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM R+GC PN T NIL+ S + G + A + M + VT + +I GLC
Sbjct: 424 HEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKS 483
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
G++D+ ++I++ M + G + NS + GL + +K P +
Sbjct: 484 GKLDEAVEIVEGMWIHGSAALGNLG--NSFI-GLVDSSSNG---------KKCLPDLITY 531
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ I G C G +++A++ F +M+ + P+ +IYD IH++C+ ++ A ++K+M
Sbjct: 532 SIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEK 591
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G T+N+++ GL + + L+ +DM+ +G P Y+ +I LCE G
Sbjct: 592 RGCNKSLQTYNSLILGLGSKNQIFEIYGLL-DDMK--EKGITPNICTYNNMISCLCEGGR 648
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A+ LL +M+ KGI P+ ++ L+
Sbjct: 649 IKDATSLLDEMLQKGISPNISSFRLLI 675
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 85/206 (41%), Gaps = 5/206 (2%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
V+ LIR L G D Q + + YN VL RE++ D
Sbjct: 80 VSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDKVDSFSWLY 139
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
K M + P +L I G C G EDA+ FD+M +G PN + L+ YC+
Sbjct: 140 KDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRA 199
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
A EL+ M G P +NT++S CR+G A +LVE MR G P
Sbjct: 200 GLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVER-MR--EDGLFPDV 256
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQM 475
++ I ALC G AS + M
Sbjct: 257 VTFNSRISALCSAGKILEASRIFRDM 282
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/490 (28%), Positives = 231/490 (47%), Gaps = 40/490 (8%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKK 71
+F ++R R ++ K ++ + P ++ N +L + +K +++A Y +
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY-AE 239
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M + YT+ I++ LC ++ + + M+ G KPN V YNT+IH G
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ AR ++ M EP+ T+ LI CKE L A L +K G VP+ VT
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ C+ G + A + EM +KG +P+V TYN+L+ +
Sbjct: 360 LIDGYCNKGDLERAFS-------------------YRDEMVKKGIMPSVSTYNLLVHALF 400
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A D+ +M+ GI + +TY+ LI G G + M SKG
Sbjct: 401 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML-----SKG- 454
Query: 308 ISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
I P Y S++Y L R N+ EA + +++ + + P + + + G C +GNVE A
Sbjct: 455 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 514
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M + P+ V ++ L+ C+E +V EA L+ EM G P ++NT++SG
Sbjct: 515 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGY 574
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
R+G++ A + V ++M IG P Y+ LIK LC+ A LL +MV KGI
Sbjct: 575 GRRGDIKDAFR-VRDEMLSIGFN--PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGIS 631
Query: 482 PDYLTWNSLL 491
PD T+ SL+
Sbjct: 632 PDDSTYLSLI 641
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 212/470 (45%), Gaps = 66/470 (14%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L++ C R + FK ++MK +G+ P N ++ K ++ A L ++M
Sbjct: 182 FDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMF 241
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
TF+I++ CKE L A + GF P+VV+ ++
Sbjct: 242 RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIH--------- 292
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
G R G ++G R L M KG P+ TY LIS C+ G L+ A +F
Sbjct: 293 ---------GYSSR-GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ N VTY+TLI G C+ G ++ M K+G +S YN +++ L+
Sbjct: 343 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM--VKKGIMPSVSTYNLLVHALF 400
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN--------------------- 356
E + EA + +K+M K + P A+ ++ I G+ GN
Sbjct: 401 MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 460
Query: 357 --------------VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+++A F++++++G P+V++++ ++ +C V A L+KEM
Sbjct: 461 TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P TFNT++ G CR+G V A L++E R RG P Y+ LI +
Sbjct: 521 DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKR---RGIKPDHISYNTLISGYGRR 577
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEMVS 511
G + A + +M+ G P LT+N+L+ CL + Q L LL EMV+
Sbjct: 578 GDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVN 627
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 163/346 (47%), Gaps = 26/346 (7%)
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+ F +L+ C+ A G VP + T +L L + R M+ +L
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNR-MEMAWVL-- 236
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
EM R V T+NI+++ C+ G L A + M+ G
Sbjct: 237 ----------------YAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 280
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N V+Y+T+I G S G I+ +IL M +G + Y S++ G+ +E + +EA
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRILDAMR--VKGIEPDSYTYGSLISGMCKEGRLEEA 338
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+M + L P AV + I G+C G++E A D+M+++G +P+V Y+ L+HA
Sbjct: 339 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 398
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
E R+ EA +++KEM G +P A T+N +++G R GN A L E + +G
Sbjct: 399 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNE---MLSKGI 455
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ LI L + + A L +++ +G+ PD + +N+++
Sbjct: 456 EPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMV 501
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + T+I G GR I D + D + P+L +N+++ L K ++ DLA
Sbjct: 562 PDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 621
Query: 68 YRKKMMASGVQGDDYTYAILMKGL 91
K+M+ G+ DD TY L++G+
Sbjct: 622 L-KEMVNKGISPDDSTYLSLIEGM 644
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 241/515 (46%), Gaps = 47/515 (9%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLV-SRF-NMTPSLKIFNSILDVLVKEDIDLARAFYR 69
S ++V+ ++ I+ LV SRF PS+ ++N +L+ +KE ++
Sbjct: 76 SSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M+ G+ YT+ +L++ LC ++ V +L M +G KPN + L+ CK
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + L++ ME PN V ++ ++ ++C+E ++ ++EK G VPD+VT
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ LC G+V+DA I + LG + PN TYN+++
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPR---------------PNSITYNLMLKG 300
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+L+ A +F ++ + + +Y+ ++GL G+ + +L+ M D +G
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD--KGIG 358
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
I YN ++ GL + +A + M++ + P AV + G+C G V+ AK
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+M+ +PN + L+H+ + R+ EA EL+++M GY T N ++ GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGH---------------------YSPLIKALCEK 462
G + A+++V + MR G +L G+ YS L+ LC+
Sbjct: 479 SGELDKAIEIV-KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G F A L +M+G+ + PD + +N + +Q
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 231/500 (46%), Gaps = 56/500 (11%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P FN ++ L +D AR + +M G + +++T+ IL++G C G
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELF-DEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+LL+ M+S GV PN VIYNT++ S C+ G+ + ++ M E P+ VTF+ I A
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 157 YCKEENLVNALVL---LEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILEESGE-- 210
CKE +++A + +E G P+ +T +L+ C VG + DA + E E
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 211 ------------QG--RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
QG R GK LK+M KG P++ +YNIL+ C+ G+L A
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ MK +G+ + VTY L+ G CS G++D +LQ M + N +L+
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM--MRNNCLPNAYTCNILLH 439
Query: 317 GLYRENQQDEALEYLKQM-EKLFP-RAVDRSLKILGFCVDGNVEDAKRCF---------- 364
L++ + EA E L++M EK + V ++ + G C G ++ A
Sbjct: 440 SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA 499
Query: 365 -------------DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
D +IE +P+++ Y L++ C+ R EA L EM G P +
Sbjct: 500 LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDS 559
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+N + C+QG + +A +++ +DM +G Y+ LI L K L
Sbjct: 560 VAYNIFIHHFCKQGKISSAFRVL-KDME--KKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 472 LVQMVGKGILPDYLTWNSLL 491
+ +M KGI P+ T+N+ +
Sbjct: 617 MDEMKEKGISPNICTYNTAI 636
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 227/485 (46%), Gaps = 24/485 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +++G + ++ D + + + SL+ +N L LV+ +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M G+ Y+Y ILM GLC + D ++ +MK GV P++V Y L+H C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A+SL+ +M PN T +IL+ + K + A LL K G+ D VT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 185 ITKVLELLCSVGRVMDAVEILE-----ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+++ LC G + A+EI++ S G LG G +E CLP++ TY
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN-NCLPDLITY 527
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ L++ C+ G A ++F +M + + + V Y+ I C G+I ++L+ ME
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME- 586
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K+G + YNS++ GL +NQ E + +M++ + P + I C V
Sbjct: 587 -KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---ERVREASELMKEMTGHGYLPIASTF 414
EDA D+M+++ PNV + LI A+C+ + +E E + G + F
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +L+ G LK E + RG G+ Y L+++LC+K + AS +L +
Sbjct: 706 NELLAA-------GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 475 MVGKG 479
M+ +G
Sbjct: 759 MIDRG 763
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 229/507 (45%), Gaps = 39/507 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E F ++RG +A + + ++ + + F + P+ I+N+I+ +E +
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKM 239
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV----KPNSVIYNTLIH 124
+KM G+ D T+ + LC +V D ++ M+ +PNS+ YN ++
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299
Query: 125 SLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + A++L + E +D+ +++I + + + A +L++ G P
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ + +++ LC +G + DA I+ G +GKV L
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+EM R CLPN T NIL+ S + G + A ++ M G + VT + ++ GLC
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
G +D ++I++ M + G + NS + GL D +E P +
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLG--NSYI-GLV----DDSLIE-----NNCLPDLITY 527
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S + G C G +AK F +M+ E P+ V Y+ IH +C++ ++ A ++K+M
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G T+N+++ GL + + L++E +G P Y+ I+ LCE
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE---KGISPNICTYNTAIQYLCEGEK 644
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A+ LL +M+ K I P+ ++ L+
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLI 671
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 207/430 (48%), Gaps = 37/430 (8%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA---- 135
+++TY L+ GLC ++ ++LL M+ RG+ P ++N +I LCK G+ G A
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDVVTITKVLELLCS 194
+++ P+ +TF+IL+ A K + A + E S +P+VVT T V+ LC
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G++ A+E+L+ M GC PNV TY++L+ C+ G D
Sbjct: 149 DGKLDRAIELLD-------------------LMNETGCCPNVITYSVLVEGLCKAGRTDK 189
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
+ +M G + + Y+TL+ GLC R+D+ L+++QLM + G + YNS+
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM--IRSGCYPTVVTYNSL 247
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ R Q D A ++ M + P ++ + I G C D ++DA+ QM+
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307
Query: 373 VPNVVIYDCLIHAYCQEERV------REASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
VP+V+ Y +I C++ RV A E+++ M G P A T+ V+ GLCR
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
AL L+ R I +P +S +I +LC+ +A + M + P+ +
Sbjct: 368 SQQALALLR---RMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVA 424
Query: 487 WNSLLICLSQ 496
+ +L+ LS+
Sbjct: 425 YAALIDGLSK 434
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 220/497 (44%), Gaps = 38/497 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
PP ++ VI+GL +A D + V+ TP + FN ++D LVK ++ A
Sbjct: 62 PPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQ 121
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +S + TY ++ GLC ++ +LL +M G PN + Y+ L+ L
Sbjct: 122 IFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGL 181
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+ + +L+ +M +P+ + ++ L+ CK L AL L++ G P V
Sbjct: 182 CKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTV 241
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT ++EL C R +V R ++ M +GC P+V YN +
Sbjct: 242 VTYNSLMELFC-------------------RSKQVDRAFRLIQVMSERGCPPDVINYNTV 282
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK------ILQL 296
I+ C LD A + M + +TY T+I GLC R+D K IL++
Sbjct: 283 IAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEM 342
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M+ + G Y V+ GL R + +AL L++M ++ P S+ I C
Sbjct: 343 MKQT--GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKS 400
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+++ A + F M E PN V Y LI + V +A + + M + P +T+
Sbjct: 401 HDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMV-ESFRPGVATY 459
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+VL GLC G + A+++VE I + P Y LI+ LC + A L
Sbjct: 460 NSVLDGLCGVGRIEEAVRMVEG---MIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516
Query: 475 MVGKGILPDYLTWNSLL 491
+ KG + +N L+
Sbjct: 517 VEAKGFAMEVGVYNVLV 533
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 196/407 (48%), Gaps = 33/407 (8%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
R G + + + + PN Y +LIH LCK GK+ +A L+ +M + P +
Sbjct: 10 RAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHN 69
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+I CK +AL + PD++T +++ L GRV +A +I E
Sbjct: 70 GVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTS 129
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ CLPNV TY +I+ C+ G LD A+++ + M G N
Sbjct: 130 SQ------------------CLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNV 171
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+TY L+ GLC GR D G +LQ M ++ G + + YN++L GL + + DEALE +
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEM--TRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ M + +P V + + FC V+ A R M E G P+V+ Y+ +I C++
Sbjct: 230 QLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRD 289
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL-----VEEDMRGIGRG 444
R+ +A L+K+M +P T++T++ GLC+ V KL + E M+ G
Sbjct: 290 ARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT--G 347
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P +G Y+ +I+ LC Q A LL +M+ ++PD +++ ++
Sbjct: 348 CPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVI 394
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 213/435 (48%), Gaps = 31/435 (7%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M S Q P+ + TVI GL + ++ ++ DL++ P++ ++ +++ L K
Sbjct: 126 MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAG 185
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
++M G Q D Y L+ GLC + R+ + +L+ +M G P V YN
Sbjct: 186 RTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYN 245
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+L+ C++ +V RA L+ M E P+ + ++ +I C++ L +A LL++ +
Sbjct: 246 SLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAA 305
Query: 177 GFVPDVVTITKVLELLCSVGRV---------MDAVEILEESGEQGRLGK----VKGGCR- 222
VPDV+T + +++ LC RV + +E+++++G G ++G CR
Sbjct: 306 RCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRA 365
Query: 223 --------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
L+ M +P++ +++++I S C++ LD+A +F M N V Y
Sbjct: 366 RKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAY 425
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
LI GL GG +D +++ +LM +S + ++ YNSVL GL + +EA+ ++ M
Sbjct: 426 AALIDGLSKGGEVDKAVRVFELMVES---FRPGVATYNSVLDGLCGVGRIEEAVRMVEGM 482
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
++ FP I G C VE+A F + +G V +Y+ L++ C+++R+
Sbjct: 483 IHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRL 542
Query: 393 REASELMKEMTGHGY 407
+A + ++ GY
Sbjct: 543 SDAHGVANKLIEAGY 557
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 17/294 (5%)
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A+ +L +G+ G+ + +E ER C+PN TY LI C+ G LD A ++ +
Sbjct: 4 ALNLLVRAGQHGQ------AVQLFRE-ER--CVPNEFTYGSLIHGLCKAGKLDQAYELLD 54
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+M+ GI ++ +I+GLC GR D L + + +K I +N ++ L +
Sbjct: 55 EMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK--CTPDIITFNILVDALVK 112
Query: 321 ENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +EA + + M + P V + I G C DG ++ A D M E G PNV+
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y L+ C+ R + L++EMT G+ P +NT+L+GLC+ + AL+LV+
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G P Y+ L++ C A L+ M +G PD + +N+++
Sbjct: 233 IRS---GCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVI 283
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 227/510 (44%), Gaps = 37/510 (7%)
Query: 20 GLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQG 79
G + ++D + + R PS+ F ++ V+V+ KKM +
Sbjct: 55 GFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPC 114
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+ Y++ ILMK C +++ + G P V +NTL+H LC ++ A L
Sbjct: 115 NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLF 174
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
M +PN VTF+ L+ C+E +V A+ LL++ G P+ +T +++ +C +G +
Sbjct: 175 HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234
Query: 200 DAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNIL 242
A+ +L + E + G+ EM+ K P++ TYN +
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ +C +G A + +M I+ + VT+ LI G K + E E
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEG------KFFEAEELYDE 348
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVDGN 356
I P Y+S++ G ++N+ D A + YL + P + + I G+C
Sbjct: 349 MLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKR 408
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V+D + +M E G V N + Y LIH +CQ + A +L++EM G P T NT
Sbjct: 409 VDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNT 468
Query: 417 VLSGLCRQGNVGTALKLVEE--------DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+L GLC G + AL++ + D G P Y+ LI L +G F A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEA 528
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
L +M +GI+PD +T++S++ L +Q+
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQS 558
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 225/494 (45%), Gaps = 57/494 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLA 64
P++ + T++ G+ + + D V A +L+ + ++ P++ I+N+I+D L K+
Sbjct: 215 PNQITYGTIVDGMCK---MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSD 271
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+M + D TY ++ G C++ R D +LL M R + P+ V ++ LI+
Sbjct: 272 AHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALIN 331
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+ K GK A L +M P+ VT+S +I +CK+ L A + + + G P
Sbjct: 332 AFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D++T ++ C RV D G + L EM G + N TY
Sbjct: 392 DIITFNTLIAGYCRAKRVDD-------------------GIKLLHEMTEAGLVANTITYT 432
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI +C+ G L++A D+ +M G+ N VT +TL+ GLC G++ D L++ + M+ S
Sbjct: 433 TLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 492
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
K P+N V P ++ I G +G +A
Sbjct: 493 KMDIDAS-RPFNGVE-----------------------PDVQTYNILICGLINEGKFLEA 528
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ +++M G VP+ + Y +I C++ R+ EA+++ M + P TFNT+++G
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITG 588
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C+ G V L+L E + RG + + Y LI + A + +M+ G+
Sbjct: 589 YCKAGMVDDGLELFCEMGQ---RGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGV 645
Query: 481 LPDYLTWNSLLICL 494
PD +T ++L L
Sbjct: 646 YPDTITIRNMLTGL 659
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 222/436 (50%), Gaps = 29/436 (6%)
Query: 27 INDVVKATDLVSR---FNMTPSLKIFNSILD-VLVKEDIDLARAFYRKKMMASGVQGDDY 82
+N VV A ++ + + P FN++++ ++ +I A + +M+ G Q D
Sbjct: 140 LNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLF-NEMVRRGHQPDVI 198
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
+Y+ ++ GLC + +LL M+ +G KPN V Y T+I SLCK+ V A L+S+M
Sbjct: 199 SYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEM 258
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ P+ VT+S ++ +C +L A +L + +P+ VT T +++ LC G V
Sbjct: 259 VDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMV 318
Query: 199 MDAVEILEESGEQGRLGK-------VKGGC---------RFLKEMERKGCLPNVDTYNIL 242
+A + E ++G + G C + L M KGC P V +YNIL
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ YC+ LD A + +M ++ + VTY TL++GLC GR + L + + M S
Sbjct: 379 INGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSS-- 436
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDA 360
G + Y+++L GL + DEAL+ LK M+ K+ P V ++ I G + G +E A
Sbjct: 437 GLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVA 496
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K F ++ +G P + Y +I +E EA EL ++M G+LP + ++N ++ G
Sbjct: 497 KELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQG 556
Query: 421 LCRQGNVGTALKLVEE 436
+ + TA++L++E
Sbjct: 557 FLQNQDSSTAIRLIDE 572
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 240/523 (45%), Gaps = 60/523 (11%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
I+D + + + R N PS+ F L + K+ +M GV + Y+ I
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---- 142
L+ LC N V +L M G++P+++ +NTLI+ C G++ A L ++M
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+P+ +++S +I CK N AL LL K G P++V T +++ LC V DA+
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++L EM +G P+V TY+ ++ +C G L+ A +FN+M
Sbjct: 253 DLL-------------------SEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 293
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ N VT+ L+ GLC G + + + + M +K+G++ YN+++ G N
Sbjct: 294 VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM--TKKGAEPNAYTYNALMDGYCLNN 351
Query: 323 QQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
Q DEA + L M V S IL G+C +++AK +M E+ P+ V Y
Sbjct: 352 QMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYS 411
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL------- 433
L+ CQ R +EA L KEM G LP T++T+L GLC+ G++ ALKL
Sbjct: 412 TLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQES 471
Query: 434 -VEEDM------------------------RGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+E D+ + G P Y+ +IK L ++G A
Sbjct: 472 KIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEA 531
Query: 469 SMLLVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMV 510
L +M G LP+ ++N ++ L Q + + L++EMV
Sbjct: 532 YELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMV 574
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 235/496 (47%), Gaps = 33/496 (6%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGD 80
+ + + + VV + + F +T ++ N +++ L + + + KM G+Q D
Sbjct: 102 IAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPD 161
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
T+ L+ G C+ + + L + M RG +P+ + Y+T+I+ LCK+G A L+
Sbjct: 162 AITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLR 221
Query: 141 DMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
MEE PN V ++ +I + CK+ + +A+ LL + G PDVVT + +L CS+G
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281
Query: 197 RVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYN 240
+ +A + E + + V G C+ + M +KG PN TYN
Sbjct: 282 HLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYN 341
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ YC +D A V + M G + +Y+ LI G C R+D+ +L M +
Sbjct: 342 ALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSE- 400
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
KE + ++ Y++++ GL + + EAL K+M L P + S + G C G+++
Sbjct: 401 KELTPDTVT-YSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLD 459
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A + M E P++V+Y+ LI ++ A EL ++ G P T+ ++
Sbjct: 460 EALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519
Query: 419 SGLCRQGNVGTALKL---VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
GL ++G A +L +E+D G LP S Y+ +I+ + +A L+ +M
Sbjct: 520 KGLLKEGLSDEAYELFRKMEDD------GFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Query: 476 VGKGILPDYLTWNSLL 491
VGK D T+ LL
Sbjct: 574 VGKRFSADSSTFQMLL 589
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 29/333 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDV-VKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR 65
PPD + T++ G +N+ + ++V R N+ P+ F ++D L KE + AR
Sbjct: 264 PPDVVTYSTILHGFCSLGHLNEATILFNEMVGR-NVMPNTVTFTILVDGLCKEGMVSEAR 322
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ + M G + + YTY LM G CL N++ + K+L +M +G P YN LI+
Sbjct: 323 CVF-EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILING 381
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK ++ A+SL+ +M E P+ VT+S L+ C+ AL L ++ S G +PD
Sbjct: 382 YCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPD 441
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
++T + +L+ LC G + +A+ + LK M+ P++ YNI
Sbjct: 442 LMTYSTLLDGLCKHGHLDEAL-------------------KLLKSMQESKIEPDIVLYNI 482
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI G L+ A ++F+ + DGI TY +I+GL G D+ ++ + MED
Sbjct: 483 LIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMED-- 540
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+G YN ++ G + A+ + +M
Sbjct: 541 DGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+++DA F +M+ P+VV + + + ++++ L +M G + N
Sbjct: 72 SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ LCR +V A+ ++ + + G P + ++ LI C +G + A L +M
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFK---LGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188
Query: 476 VGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
V +G PD +++++++ +C S T+ L LL
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLL 220
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 226/501 (45%), Gaps = 48/501 (9%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP F ++ + + + + V+ + + F + ++ N VL+ L
Sbjct: 68 MHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLN----VLINSFCHLN 123
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G Q D ++ L+KGLCL ++G+ L M G +P+ VIY
Sbjct: 124 RVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYA 183
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ ME +P+ V + LI + CK+ A L + +
Sbjct: 184 TLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK 243
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P++VT ++ LC+ LG+ K L EM +PN
Sbjct: 244 GISPNIVTCNSLVYALCN-------------------LGEWKHVNTLLNEMVDSKIMPNA 284
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
+ ++ + C+ G++ A DV + M G+ + VTY LI G C +D+ +K+ +
Sbjct: 285 ISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDM 344
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M +G + YN+++ G + + D+A+ ++M +KL P V + I G C
Sbjct: 345 M--VHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHV 402
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++DA F +M+ G +P++V Y L+ C+ + +A L+K + G P +
Sbjct: 403 GRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIY 462
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGI-----GRGSLPGSGHYSPLIKALCEKGGFQSAS 469
V+ G+CR G + ED R + +G P Y+ + LC++G A+
Sbjct: 463 TIVIDGMCRAGEL--------EDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEAT 514
Query: 470 MLLVQMVGKGILPDYLTWNSL 490
L ++M D T+N++
Sbjct: 515 KLFMEMDENACSADGCTYNTI 535
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 27/304 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
P+ TV+ L + M+ D++ + + P + + +++D ++ ++D A
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKV 341
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ G + ++Y L+ G C R+ L M + + PN+V YNTLIH LC
Sbjct: 342 F-DMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A +L +M + P+ VT+ IL+ CK +L A+ LL+ PD+
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQ 460
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T V++ +C G + DA ++ +G + G + + EM
Sbjct: 461 IYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEM 520
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ C + TYN + + A+ + +M G S + V+ TL+ G+ S
Sbjct: 521 DENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCD-VSTTTLLVGMLS---- 575
Query: 288 DDGL 291
DDGL
Sbjct: 576 DDGL 579
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 6/211 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + T+I GL + D + + P L + +LD L K +D A A
Sbjct: 387 PNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMAL 446
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K + S + D Y I++ G+C + D L + S+G+KPN YN + H LC
Sbjct: 447 L-KAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLC 505
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A L +M+E + T++ + + + A+ LLE+ + GF DV
Sbjct: 506 KRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVS 565
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL 214
T T ++ +L G LE+ R+
Sbjct: 566 TTTLLVGMLSDDGLDQSEAHKLEDMFPHLRI 596
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 30/279 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I G +++ VK D++ P++ +N++++ K E +D A
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376
Query: 68 Y----RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ R+K++ + V TY L+ GLC R+ D L M + G P+ V Y L+
Sbjct: 377 FEEMCRQKLIPNTV-----TYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCKN + +A +L+ +E +P+ ++I+I C+ L +A L S G
Sbjct: 432 DYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK 491
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+V T + LC G + +A ++ E E R + +
Sbjct: 492 PNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQL 551
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
L+EM +G +V T +L+ + G+ S DM
Sbjct: 552 LEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
++DA F++M+ P++V + ++ + + +R L ++M G T
Sbjct: 53 NTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +++ C V A ++ + ++ G P + ++ LIK LC +G A L +
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILK---LGCQPDTASFTTLIKGLCLEGQIGEALHLFDK 169
Query: 475 MVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
M+ +G PD + + +L+ +C + T+ + LL
Sbjct: 170 MIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 241/505 (47%), Gaps = 35/505 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD++I+ +I G +A+ K + + + P++ + +I+D L K
Sbjct: 43 PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKL 102
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G + YTY ++++GLC ++ + K+L M RG P+ V YN+ I LCK
Sbjct: 103 LDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK 162
Query: 129 NGKVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+V AR ++ M P+ V+++ +I CK +L +A +L++ + G PDVVT +
Sbjct: 163 CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSS 222
Query: 188 VLELLCSVGRVMDAVEILEES----------------GEQGRLGKVKGGCRFLKEMERKG 231
+++ C G V A+ +L+ G RLG + L EMER+G
Sbjct: 223 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+V +YN I C+ + A VF+ M G + N +Y L+ LC +DD
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDA- 341
Query: 292 KILQLMEDSKEGSK-GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF-PRAVDRSLK 347
+ L+E ++E + I Y +L GL + + DEA ++ EK+ P ++
Sbjct: 342 --ITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 399
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ C ++ A + QM+E NVV ++ L+H C ++R+ +A ++ M G+
Sbjct: 400 LDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 458
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P T+ T++ +C+ G AL+L EE ++G G +P YS LI L + +
Sbjct: 459 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKG---GCVPDVVTYSALITGLVHENMAEE 515
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLI 492
A +L ++ D WN++++
Sbjct: 516 AYLLFTKL-------DVALWNAMIL 533
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 195/422 (46%), Gaps = 60/422 (14%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ Q D +T+AIL++GLC +N++ +LL MK G P+ IYN LI K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
G+A +++M + +C +P VVT T +++
Sbjct: 61 FGQAFKFLAEM-----------VKNHC--------------------LPTVVTYTNIVDG 89
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC GR DAV++L+ EM KGC PN+ TYN+++ CE
Sbjct: 90 LCKAGRTKDAVKLLD-------------------EMRDKGCSPNIYTYNVIVEGLCEERK 130
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A + +M + G + VTY++ I+GLC R+D+ K L M + + + Y
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD-----VVSY 185
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+V+ GL + D A L QM P V S I GFC G VE A D M++
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G PN+V Y+ L+ A + + +A +++ EM G+ P ++N + GLC+ V
Sbjct: 246 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 305
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A + + R + RG P + YS L++ LC+K A L+ Q K + D L +
Sbjct: 306 AKAVFD---RMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362
Query: 490 LL 491
LL
Sbjct: 363 LL 364
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 252/542 (46%), Gaps = 69/542 (12%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKED-IDLAR 65
E + +TVI+ + M + +A D+ R F P ++ +NS+L+ L++ + D A
Sbjct: 78 EDVALTVIKAYAKNSMPD---QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAE 134
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+F+ G+ + TY IL+K C + +LL+ M +G P+ Y TLI+S
Sbjct: 135 SFFLY-FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-P 180
L KNG + A L +M E P+ ++ILI + K+ +++NA + E+ V P
Sbjct: 194 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253
Query: 181 DVVTITKVLELLCSVGRVMDAVEILE--ESGEQGR--------------LGKVKGGCRFL 224
++ + ++ LC G+ ++ EI + E+G+ G + G R
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
KEM G P+V YN +++ Y G ++ L+++ M+ +G V+Y+ LIRGL
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFEN 372
Query: 285 GRIDDGLKILQLMEDS-----------------------------KEGSKGR----ISPY 311
++D+ + I +L+ + +E GR Y
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+S++ GL RE + DE L QM K P + I GF +EDA R F M+
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G P VV Y+ LI+ + ER EA L+KEM G+ P T++ +++GLC+ +
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L + + +G P ++ +I LC G + A L +M + +P+ +T N+
Sbjct: 553 ALNLW---CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609
Query: 490 LL 491
L+
Sbjct: 610 LM 611
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 223/491 (45%), Gaps = 31/491 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKK 71
+F +++ L +++ V + +L+ + +++ K + D A +++
Sbjct: 45 VFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRM 104
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
G Q +Y L+ L +N+ + ++ G+ PN YN LI C+ +
Sbjct: 105 HEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQ 164
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+A+ L++ M E P+ ++ LI + K + +AL L ++ G PDV
Sbjct: 165 FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 224
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ G +++A EI E R LK PN+ +YN++I+ C
Sbjct: 225 LIDGFFKKGDILNASEIWE---------------RLLK---GPSVYPNIPSYNVMINGLC 266
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G D + ++++ MK + + TY TLI GLC G +D ++ + M ++ G
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM--AENGVSPD 324
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV-DRSLKILGFCVDGNVEDAKRCFDQ 366
+ YN++L G R + +E LE K MEK R V ++ I G + V++A ++
Sbjct: 325 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWEL 384
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM-TGHGYLPIASTFNTVLSGLCRQG 425
+ E+ + + Y L+H C+ + +A +++E G G L + ++++++GLCR+G
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA-YSSMINGLCREG 443
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ ++++ + G P + +I + A MV KG P +
Sbjct: 444 RLDEVAGVLDQMTK---HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 500
Query: 486 TWNSLLICLSQ 496
T+N+L+ LS+
Sbjct: 501 TYNTLINGLSK 511
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G + + + ++ G +++ D + M S+G P V YNTLI+ L K
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L+ +M +PN +T+S+L+ C+ + L AL L ++ GF PDV
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ LCS G+V DA+++ E M+++ C+PN+ T+N L+ +
Sbjct: 574 IIIHGLCSSGKVEDALQLYSE-------------------MKQRKCVPNLVTHNTLMEGF 614
Query: 247 CETGVLDSALDVFNDM 262
+ + A +++ +
Sbjct: 615 YKVRDFERASKIWDHI 630
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 244/541 (45%), Gaps = 64/541 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + I I +I+ I V + +S SL N++L L K E ++ AR
Sbjct: 168 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 227
Query: 68 YRKKMMASGVQ-----------------------------------GDDYTYAILMKGLC 92
Y K+M+ SG+Q D +TY L+ G C
Sbjct: 228 Y-KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 286
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDV 148
+ F + M G PNSV Y+TLI+ LC G+V A ++ +M EP
Sbjct: 287 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 346
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+++ I A C E+ A+ L+ + G P+V T T ++ L +G++ A+ + +
Sbjct: 347 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 406
Query: 209 GEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G + G+ + ME G L N TYN +I C G +
Sbjct: 407 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 466
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A+ +F M G VTY+TLI G + G +++ ++L LM+++ G + YN
Sbjct: 467 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN--GCEPDEWTYN 524
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ G + + + A Y ++M + L P V + I G DG V+ A ++M E
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PNV Y+ +I+ +E R EA ++ +M G LP T+ T++ GLCR G A
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
K+ DM R LP YS LI LC++G A +LL +M KG+ PD +T+ SL
Sbjct: 645 FKIF-HDME--KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701
Query: 491 L 491
+
Sbjct: 702 I 702
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 226/492 (45%), Gaps = 35/492 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + ++I G R R ++ D + + P+ ++++++ L E +D A
Sbjct: 273 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 332
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ G++ YTY + + LC + +L+ MK RG +PN Y LI L
Sbjct: 333 L-EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 391
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ A L M + PN VT++ LI C AL + G + +
Sbjct: 392 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 451
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T ++++ LC G + A+ + E+ + G L G V R L M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ GC P+ TYN L+S + + G L+SA F +M G++ N V+Y TLI G G++
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D L +L+ ME+ G + YN+V+ GL +EN+ EA + +M + L P + +
Sbjct: 572 DIALSLLERMEEM--GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYT 629
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C +G + A + F M + +PN+ Y LI+ CQE + EA L+KEM
Sbjct: 630 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 689
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P TF +++ G G + A L+ R + G P YS L+K G
Sbjct: 690 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLR---RMVDVGCKPNYRTYSVLLK------GL 740
Query: 466 QSASMLLVQMVG 477
Q +LL + V
Sbjct: 741 QKECLLLEEKVA 752
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 199/460 (43%), Gaps = 51/460 (11%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
DI+ A + +KM+ G TY L+ G V + +LL +MK G +P+ Y
Sbjct: 465 DIEKAMVLF-EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 523
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N L+ K GK+ A +M E PN V+++ LI + K+ + AL LLE+
Sbjct: 524 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
G P+V + V+ L R +A +I ++ EQG R G+ +
Sbjct: 584 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQF 643
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ +ME++ CLPN+ TY+ LI C+ G D A + +M+ G++ + VT+ +LI
Sbjct: 644 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 703
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE--------NQQDEALEYL 331
G GRID +L+ M D G K Y+ +L GL +E Q EA+
Sbjct: 704 GFVVLGRIDHAFLLLRRMVDV--GCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSF 761
Query: 332 KQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
EK D N E +M E G P + Y L+ C++ R
Sbjct: 762 SPHEK-----------------DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGR 804
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
EA +L+K+M G+ P + ++L C+ V ALK+ +G
Sbjct: 805 FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE---AKGFQLHLSI 861
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y LI ALC+ G + A L M+ K D + W L+
Sbjct: 862 YRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 901
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 175/426 (41%), Gaps = 44/426 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G + ++ + + + P+++ +N++++ L KE+
Sbjct: 553 PNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 612
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+ + TY L+ GLC R FK+ H M+ R PN Y++LI+ LC+
Sbjct: 613 CDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 672
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK A L+ +ME P++VTF+ LI + + +A +LL + G P+ T
Sbjct: 673 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRT 732
Query: 185 ITKVL-----ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+ +L E L +V E + + + L M GC P +DTY
Sbjct: 733 YSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY 792
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ L+S C G A + DMK G + Y +L+ C +D LKI +E
Sbjct: 793 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE- 851
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
+G + +S Y ++ I C G VE+
Sbjct: 852 -AKGFQLHLSIYRAL---------------------------------ICALCKAGQVEE 877
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A+ FD M+E+ + +++ L+ +E + +L+ M + P T+ +
Sbjct: 878 AQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGR 937
Query: 420 GLCRQG 425
L R G
Sbjct: 938 ELSRIG 943
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 4/169 (2%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
+S P+L +++++ L ++ K M G D Y L+ C
Sbjct: 780 MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLE 839
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
V K+ H ++++G + + IY LI +LCK G+V A++L +M E +++ +++
Sbjct: 840 VDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTV 899
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
L+ KE L + LL S F P++ T + L +G+ +++
Sbjct: 900 LVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 2/136 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD I+ +++ + ++ +K + L I+ +++ L K ++ A+A
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQAL 881
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ D+ + +L+ GL + KLLH+M+S+ PN Y L L
Sbjct: 882 F-DNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELS 940
Query: 128 KNGKVGRARSLMSDME 143
+ GK + L ++
Sbjct: 941 RIGKSIESEPLADKLK 956
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 237/517 (45%), Gaps = 44/517 (8%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
L+ R TPSL FN +L L K + + Y + M SG+ D T IL+ LC
Sbjct: 59 LMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQ-MRLSGLSSDRCTLNILLNCLCNV 117
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
NR+ +GF + RG PN V YNTLI LC ++ A L M++ P+ VT+
Sbjct: 118 NRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY 177
Query: 151 SILICAYCKEENLVNALVLLEK------SFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
LI C N+ AL L ++ + P+V+T +++ LC VGR +A ++
Sbjct: 178 GTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237
Query: 205 LEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
EE QG + GK + R L EM +G P++ T+N+LI + C+
Sbjct: 238 FEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCK 297
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G + A + M GI + VTY++LI G C G ++ ++ M +G + +
Sbjct: 298 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM--PSKGCEPDV 355
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN ++ G + + +EA++ +M + P + + G + G V+DAK+ F
Sbjct: 356 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 415
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M G N Y + C+ + + EA +L E+ + N ++ GLC+ G
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ TA +L E + G P Y+ +I C +G A++L+ +M G PD +T
Sbjct: 476 LETAWELFE---KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIIT 532
Query: 487 WNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKE 523
+N+L+ + N++ V ++H ++ K+
Sbjct: 533 YNTLMRGFYES---------NKLEEVVQLLHRMAQKD 560
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 221/439 (50%), Gaps = 33/439 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + T+I+GL I++ + + + TP + + +++ L +I++A
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196
Query: 68 YRKKM-----MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+++ + + + TY I++ GLC R + +L MK++G+ P+ + YN+L
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSL 256
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
IH C GK ++ L+ +M +P+ VTF++LI CKE ++ A LL G
Sbjct: 257 IHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 316
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VPD+VT ++E C VG + A E+ M KGC P+V +
Sbjct: 317 VPDLVTYNSLIEGFCMVGDLNSARELF-------------------VSMPSKGCEPDVIS 357
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN+LI+ Y +T ++ A+ ++N+M + G N +TYD+L++G+ G++DD K+ +M+
Sbjct: 358 YNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 417
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
G Y L GL + + EA++ +++ + +L L G C G
Sbjct: 418 --AHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A F+++ EG PNVV Y +IH +C+E +V +A+ L+++M +G P T+NT
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535
Query: 417 VLSGLCRQGNVGTALKLVE 435
++ G + ++L+
Sbjct: 536 LMRGFYESNKLEEVVQLLH 554
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 172/404 (42%), Gaps = 36/404 (8%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILIC 155
H+M P+ +N L+ L K + SL + M + T +IL+
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
C L G+ P++VT +++ LC R+ +A
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEAT------------- 159
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW------ 269
R M++ GC P+V TY LI C TG ++ AL + +M D +
Sbjct: 160 ------RLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKP 213
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N +TY+ ++ GLC GR D+ ++ + M+ +G I YNS+++G + +E+
Sbjct: 214 NVITYNIIVDGLCKVGREDEAKQLFEEMK--TQGMIPSIISYNSLIHGFCCAGKWEESKR 271
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L +M + L P V ++ I C +G V +AK+ MIE G VP++V Y+ LI +C
Sbjct: 272 LLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 331
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ A EL M G P ++N +++G + V A+KL E M +G+ P
Sbjct: 332 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE-MLLVGKR--P 388
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y L+K + G A L M GI + T+ L
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 432
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 162/345 (46%), Gaps = 33/345 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
PD F +I L + + + K ++ + P L +NS+++ + D++ AR
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M + G + D +Y +L+ G T +V + KL + M G +PN + Y++L+ +
Sbjct: 343 FVS-MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 401
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GKV A+ L S M+ N T+ I + CK + L A+ L + S F ++
Sbjct: 402 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 461
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +++ LC G++ A E+ E+ +G PNV TY I+I
Sbjct: 462 NLNCLIDGLCKAGKLETAWELFEKLSNEGHE-------------------PNVVTYTIMI 502
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C G +D A + M+ +G + + +TY+TL+RG ++++ +++L M K+
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQ-KDV 561
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP--RAVDRSL 346
S I+ + V+ L ++ + E L L + FP + VD+ L
Sbjct: 562 SPDAIT-CSIVVDMLSKDEKYQECLHLLPR----FPIQKGVDKHL 601
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 215/435 (49%), Gaps = 28/435 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F T+I GL + V+ D + P + + +I++ L K +A A +KM
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMG 254
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+G Q D TY+ ++ LC RV + + MK++G+ PN YN+LI LC +
Sbjct: 255 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 314
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A +++++M PN VTFS+LI +CKE N+ A +L+ G P+VVT +
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS-- 372
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+M+ + E E +L V M KGC P+V +YNILI+ YC+
Sbjct: 373 --------LMNGYSLQAEVVEARKLFDV---------MITKGCKPDVFSYNILINGYCKA 415
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ A +FN+M G++ + V+Y+TLI GLC GR+ + + + M + G+ +
Sbjct: 416 KRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTN--GNLPDLC 473
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
Y+ +L G ++ +A + M+ + P V ++ I C N+++A++ F ++
Sbjct: 474 TYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 533
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+G PNV IY +I+ C+E + EA E + M G P ++N ++ G + +
Sbjct: 534 FVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDE 593
Query: 428 GTALKLVEEDMRGIG 442
A++L+ E MR G
Sbjct: 594 SRAVQLIGE-MREKG 607
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 223/475 (46%), Gaps = 33/475 (6%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
R I+D + + + P + FN +L +VK A K+M +G+ D YT
Sbjct: 100 RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM- 142
+L+ RV GF +L + G++ V +NTLI+ LCK GK G+A L DM
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 143 ---EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+P+ T++ +I CK V A L K G PDVVT + +++ LC RV
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A++I M+ KG PN+ TYN LI C A +
Sbjct: 280 EALDIFSY-------------------MKAKGISPNIFTYNSLIQGLCNFSRWREASAML 320
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
N+M I N VT+ LI C G + + +L+ M ++ G + + Y+S++ G
Sbjct: 321 NEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM--TEMGVEPNVVTYSSLMNGYS 378
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ + EA + M + P ++ I G+C + +AK+ F++MI +G P++V
Sbjct: 379 LQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIV 438
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ LI CQ R+REA +L K M +G LP T++ +L G C+QG + A +L
Sbjct: 439 SYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL---- 494
Query: 438 MRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R + L P Y+ LI A+C+ + A L ++ +G+ P+ + +++
Sbjct: 495 FRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 178/409 (43%), Gaps = 58/409 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I L + R +N+ + + ++P++ +NS++ L +
Sbjct: 260 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 319
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+MM+ + + T+++L+ C V + +L M GV+PN V Y++L++
Sbjct: 320 LNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL 379
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+V AR L M +P+ +++ILI YCK + + A L + G PD+V+
Sbjct: 380 QAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVS 439
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC +GR+ +A ++ K M G LP++ TY+IL+
Sbjct: 440 YNTLIDGLCQLGRLREAHDL-------------------FKNMLTNGNLPDLCTYSILLD 480
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ G L A +F M+ + N V Y+ LI +C + + K+ E +G
Sbjct: 481 GFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFS--ELFVQGL 538
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ + Y +++ GL +E DEALE + ME
Sbjct: 539 QPNVQIYTTIINGLCKEGLLDEALEAFRNME----------------------------- 569
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
E+G PN Y+ +I + Q + A +L+ EM G++ +T
Sbjct: 570 ----EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 173/405 (42%), Gaps = 62/405 (15%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR-SLMSDME----EPNDVTFS 151
+ D + M R +P + +N L+ ++ K A SL ME P+ T
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+LI + + + + +L K G +VT ++ LC VG+ AVE+ ++
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDD---- 217
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
M +G P+V TY +I+ C+ G +A +F M G +
Sbjct: 218 ---------------MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDV 262
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VTY T+I LC R+++ L I M+ +G I YNS++ GL ++ EA L
Sbjct: 263 VTYSTIIDSLCKDRRVNEALDIFSYMK--AKGISPNIFTYNSLIQGLCNFSRWREASAML 320
Query: 332 KQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
+M SL I+ PN+V + LI+ +C+E
Sbjct: 321 NEM---------MSLNIM------------------------PNIVTFSLLINIFCKEGN 347
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
V EA ++K MT G P T++++++G Q V A KL + I +G P
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDV---MITKGCKPDVFS 404
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y+ LI C+ A L +M+ +G+ PD +++N+L+ L Q
Sbjct: 405 YNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ 449
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 102/230 (44%), Gaps = 11/230 (4%)
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR-ENQQDEALEYLKQME--KLFPRAVD 343
IDD L M K + I +N +L + + + D + KQME L P
Sbjct: 102 IDDALAYFNHMLHRK--PRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYT 159
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I F V+ ++I+ G +V ++ LI+ C+ + +A EL +M
Sbjct: 160 LHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEK 462
GY P T+ T+++GLC+ G A L R +G G P YS +I +LC+
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGL----FRKMGEAGCQPDVVTYSTIIDSLCKD 275
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
A + M KGI P+ T+NSL+ L + W +LNEM+S
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 325
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 239/515 (46%), Gaps = 47/515 (9%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLV-SRF-NMTPSLKIFNSILDVLVKEDIDLARAFYR 69
S ++V+ ++ I+ V SRF P + ++N +L+ ++E ++
Sbjct: 76 SSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLY 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M+ G+ + YT+ +L++ LC ++ V +L M +G KPN + L+ CK
Sbjct: 136 KDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + L++ ME PN V ++ ++ ++C+E ++ L+EK G VPD+VT
Sbjct: 196 GLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTF 255
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ LC G+V+DA I + LG + PN TYN+++
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPR---------------PNSITYNLMLKG 300
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+L+ A +F ++ + + +Y+ ++GL G+ + +L+ M D +G
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMID--KGIG 358
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
I YN ++ GL + +A + M++ + P AV + G+C G V+ AK
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+M+ +PN + L+H+ R+ EA EL+++M GY T N ++ GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGH---------------------YSPLIKALCEK 462
G + A+++V + MR G +L G+ YS L+ LC+
Sbjct: 479 SGELDKAIEIV-KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G F A L +M+G+ + PD L +N + +Q
Sbjct: 538 GRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQ 572
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/533 (27%), Positives = 240/533 (45%), Gaps = 87/533 (16%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P FN ++ L +D AR + +M G + +++T+ IL++G C G
Sbjct: 143 ISPETYTFNLLIRALCDSSCVDAARELF-DEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+LL+ M+S GV PN V+YNT++ S C+ G+ + L+ M E P+ VTF+ I A
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261
Query: 157 YCKEENLVNALVL---LEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILEESGE-- 210
CKE +++A + +E G P+ +T +L+ C VG + DA + E E
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 211 ------------QG--RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
QG R GK LK+M KG P++ +YNIL+ C+ G+L A
Sbjct: 322 DLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ MK +G+S + VTY L+ G CS G++D +LQ M + N +L+
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEM--MRNNCLPNAYTCNILLH 439
Query: 317 GLYRENQQDEALEYLKQM-EKLFP-RAVDRSLKILGFCVDGNVEDAKRCF---------- 364
L+ + EA E L++M EK + V ++ + G C G ++ A
Sbjct: 440 SLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA 499
Query: 365 -------------DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
D +IE +P+++ Y L++ C+ R EA L EM G P +
Sbjct: 500 LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDS 559
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMR----------------GIG------------- 442
+N + C+QG + +A +++ +DM G+G
Sbjct: 560 LAYNIFIHHFCKQGKISSAFRVL-KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMD 618
Query: 443 ----RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P Y+ I+ LCE G + A+ LL +M+ K I P+ ++ L+
Sbjct: 619 EMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 225/485 (46%), Gaps = 24/485 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +++G + ++ D + + + SL+ +N L LV+ +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M+ G+ Y+Y ILM GLC + D ++ +MK GV P++V Y L+H C
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A+SL+ +M PN T +IL+ + + A LL K G+ D VT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 185 ITKVLELLCSVGRVMDAVEILE-----ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+++ LC G + A+EI++ S G LG G +E CLP++ TY
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN-CLPDLITY 527
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ L++ C+ G A +F +M + + + + Y+ I C G+I ++L+ ME
Sbjct: 528 STLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDME- 586
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K+G + YNS++ GL +NQ E + +M + + P + I C G V
Sbjct: 587 -KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKV 645
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---ERVREASELMKEMTGHGYLPIASTF 414
EDA D+M+++ PNV + LI A+C+ + +E E + G + F
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +L+ G LK E + RG G+ Y L+ +LC+K + AS +L +
Sbjct: 706 NELLAA-------GQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHK 758
Query: 475 MVGKG 479
M+ KG
Sbjct: 759 MIDKG 763
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/542 (27%), Positives = 252/542 (46%), Gaps = 69/542 (12%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKED-IDLAR 65
E + +TVI+ + M + +A D+ R F P ++ +NS+L+ L++ + D A
Sbjct: 78 EDVALTVIKAYAKNSMPD---QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAE 134
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+F+ G+ + TY IL+K C + +LL+ M +G P+ Y TLI+S
Sbjct: 135 SFFLY-FETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-P 180
L KNG + A L +M E P+ ++ILI + K+ +++NA + E+ V P
Sbjct: 194 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253
Query: 181 DVVTITKVLELLCSVGRVMDAVEILE--ESGEQGR--------------LGKVKGGCRFL 224
++ + ++ LC G+ ++ EI + E+G+ G + G R
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
KEM G P+V YN +++ Y G ++ L+++ M+ +G V+Y+ LIRGL
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFEN 372
Query: 285 GRIDDGLKILQLMEDS-----------------------------KEGSKGR----ISPY 311
++D+ + I +L+ + +E GR Y
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+S++ GL RE + DE L QM K P + I GF +EDA R F M+
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G P VV Y+ LI+ + ER EA L+KEM G+ P T++ +++GLC+ +
Sbjct: 493 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDM 552
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L + + +G P ++ +I LC G + A L +M + +P+ +T N+
Sbjct: 553 ALNLW---CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609
Query: 490 LL 491
L+
Sbjct: 610 LM 611
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 223/491 (45%), Gaps = 31/491 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKK 71
+F +++ L +++ V + +L+ + +++ K + D A +++
Sbjct: 45 VFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRM 104
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
G Q +Y L+ L +N+ + ++ G+ PN YN LI C+ +
Sbjct: 105 HEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQ 164
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+A+ L++ M E P+ ++ LI + K + +AL L ++ G PDV
Sbjct: 165 FDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 224
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ G +++A EI E R LK PN+ +YN++I+ C
Sbjct: 225 LIDGFFKKGDILNASEIWE---------------RLLKG---PSVYPNIPSYNVMINGLC 266
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G D + ++++ MK + + TY TLI GLC G +D ++ + M ++ G
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM--AENGVSPD 324
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV-DRSLKILGFCVDGNVEDAKRCFDQ 366
+ YN++L G R + +E LE K MEK R V ++ I G + V++A ++
Sbjct: 325 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWEL 384
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM-TGHGYLPIASTFNTVLSGLCRQG 425
+ E+ + + Y L+H C+ + +A +++E G G L + ++++++GLCR+G
Sbjct: 385 LPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFA-YSSMINGLCREG 443
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ ++++ + G P + +I + A MV KG P +
Sbjct: 444 RLDEVAGVLDQMTK---HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 500
Query: 486 TWNSLLICLSQ 496
T+N+L+ LS+
Sbjct: 501 TYNTLINGLSK 511
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 179/389 (46%), Gaps = 28/389 (7%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++D A Y K+M +GV D Y ++ G R+ + +L VM+ G + V Y
Sbjct: 305 NLDGATRVY-KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSY 362
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N LI L +N KV A S+ + E + +T+ +L+ CK L AL +LE++ +
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
D + ++ LC GR+ + +L++ + G R K++
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
RF M KGC P V TYN LI+ + A + +M G N +TY L+
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542
Query: 280 GLCSGGRIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--K 336
GLC G ++D L + Q +E +G K + +N +++GL + ++AL+ +M+ K
Sbjct: 543 GLCQGKKLDMALNLWCQALE---KGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V + + GF + E A + +D +++ G P+++ Y+ + C R+ +A
Sbjct: 600 CVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAV 659
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+ + G LP A T+N ++ + G
Sbjct: 660 GFLNDAVDRGVLPTAITWNILVRAVLDNG 688
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 110/237 (46%), Gaps = 20/237 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G + + + ++ G +++ D + M S+G P V YNTLI+ L K
Sbjct: 454 QMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 513
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L+ +M +PN +T+S+L+ C+ + L AL L ++ GF PDV
Sbjct: 514 RFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHN 573
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRL------GKVKGGCRFLKEMERK---------- 230
++ LCS G+V DA+++ E ++ + + G +++ ER
Sbjct: 574 IIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQY 633
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P++ +YNI + C + A+ ND G+ +T++ L+R + G +
Sbjct: 634 GPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGAL 690
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I GL + + D ++ + + P+L N++++ K D + A
Sbjct: 567 PDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKI 626
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++ G Q D +Y I +KGLC +R+ D L+ RGV P ++ +N L+ ++
Sbjct: 627 W-DHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVL 685
Query: 128 KNGKV 132
NG +
Sbjct: 686 DNGAL 690
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 238/518 (45%), Gaps = 39/518 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP F ++ + + + + V+ + + F + P++ N +L+ L
Sbjct: 59 MHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN----ILINSFCHLN 114
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G Q D T+ L++GLC+ ++G+ L M G +PN V Y
Sbjct: 115 RVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYG 174
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ ME +P+ V ++ +I + CK+ + A L +
Sbjct: 175 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 234
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD+ T T ++ LC+ L + K L +M LP+V
Sbjct: 235 GISPDIFTYTSLVHALCN-------------------LCEWKHVTTLLNQMVNSKILPDV 275
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
++ ++ + C+ G + A ++ + M G+ + VTY TL+ G C +D+ +K+ +
Sbjct: 276 VIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDM 335
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M ++G + Y +++ G + ++ D+A+ ++M ++ P + + G C
Sbjct: 336 M--VRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHV 393
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++DA F +M+ G +P++V Y L+ + C+ + EA L+K + P +
Sbjct: 394 GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVY 453
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G+CR G + A L +G P Y+ +I LC++G A+ L ++
Sbjct: 454 NIIIDGMCRAGELEAARDLFSNLS---SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 510
Query: 475 MVGKGILPDYLTWNSLLICLSQQT-TWLLLLLLNEMVS 511
M G PD T+N++ Q T + LL EM++
Sbjct: 511 MDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLA 548
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 125/281 (44%), Gaps = 22/281 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
PD IF TV+ L + + + + D++ + + P + + +++D ++ ++D A
Sbjct: 273 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKV 332
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ G D +Y L+ G C +++ L M + P++ YNTL++ LC
Sbjct: 333 F-DMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A +L +M + P+ VT+SIL+ + CK +L A+ LL+ + PD+
Sbjct: 392 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+++ +C G + A ++ +G + G + + EM
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ C P+ TYN + + + A+ + +M G S
Sbjct: 512 DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
++DA F++++ P++V + L+ + + + L +M G P T N
Sbjct: 45 TLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 104
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ C VG A ++ + ++ G P ++ LI+ LC +G A L +M
Sbjct: 105 ILINSFCHLNRVGFAFSVLAKILK---LGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161
Query: 476 VGKGILPDYLTWNSLL 491
+ +G P+ +T+ +L+
Sbjct: 162 IDEGFQPNVVTYGTLI 177
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 241/572 (42%), Gaps = 102/572 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F T++ LG+ M+ + + PSL FN+++++L K+ K+
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIF 224
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+ D +TY L+ G C ++ F++ M G PNSV Y+TLI+ LC G++G
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIG 284
Query: 134 RARSLMSDMEE----PNDVTFSILICAYC---KEENLVN--------------------- 165
A ++ +M E P T+++ I + C + ++ +N
Sbjct: 285 EAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAII 344
Query: 166 -----------ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
A+ + K G VP+ VT ++ LC+ GR A++I + G L
Sbjct: 345 SGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTL 404
Query: 215 ---------------------------------------------------GKVKGGCRF 223
G + RF
Sbjct: 405 ANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRF 464
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L M+ C P+ TY LIS +C+ G LDSA F +M GIS N TY +I G C
Sbjct: 465 LYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCK 524
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G+ID L + + ME++ G I YN+++ GL + N+ EA ++ +M + L P
Sbjct: 525 EGKIDVALSLFERMEEN--GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNT 582
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + I G C + A + F +M ++ +PN Y LI+ CQE +V A L
Sbjct: 583 ITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL--- 639
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
T +G P T++T++SGLCR+G A +LV E+M+ +G P Y L+ A C+
Sbjct: 640 -TENGCEPTIDTYSTLVSGLCREGRSNEASQLV-ENMK--EKGLSPSMEIYCSLLVAHCK 695
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
A + M KG P + +LIC
Sbjct: 696 SLKVDCALEIFNLMAVKGFQPHLFIY-KVLIC 726
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 220/475 (46%), Gaps = 27/475 (5%)
Query: 45 SLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL 104
+L FN++L L K D+ + ++ +SGV+ T+ ++ LC +V + +
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
+ + + P++ Y +LI C+N K+ +A + M + PN VT+S LI C E
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------- 212
+ A+ +LE+ G P V T T + LC +GRV DA+ ++ G++G
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 213 --------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
R GK++ +M ++G +PN TYN LI+ C G AL +F+ M+
Sbjct: 341 TAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEG 400
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G N TY+ +I+GL I+ + + M K+G + YN+++ +
Sbjct: 401 HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM--LKDGPSPTVVTYNTLIVENLKRGYL 458
Query: 325 DEALEYLKQMEKLFPRAVDRSL--KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A +L M++ +R+ I GFC G ++ A F +M++ G PN Y +
Sbjct: 459 NNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAM 518
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I YC+E ++ A L + M +G T+N ++SGL + A K +
Sbjct: 519 IDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCA---KMTE 575
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G P + Y+ LI LC+ A + +M K LP+ T+ SL+ L Q+
Sbjct: 576 QGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQE 630
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/521 (25%), Positives = 225/521 (43%), Gaps = 79/521 (15%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI--LMKGLCLTNRVGDGFKLLHV 106
F S+L+ LVK+ I LA A + + +M + +D + + G+ ++ GF L
Sbjct: 107 FVSMLNRLVKDKI-LAPADHVRILMIKACRNEDELKRVTDFLHGISSSDSGLFGFTLYS- 164
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEEN 162
+NTL+ L K V A++ + S +P+ +TF+ +I CK+
Sbjct: 165 ------------FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGK 212
Query: 163 LVNALVLLEKSFSFGFVPDVVTIT-------------KVLEL------------------ 191
+ A+++ K F F PD T T K E+
Sbjct: 213 VQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYST 272
Query: 192 ----LCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
LC+ GR+ +A+++LEE E+G +G+V ++ M +KG
Sbjct: 273 LINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKG 332
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C P+V TY +IS G ++ A+ +++ M +G+ N VTY+ LI LC+ GR L
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
KI ME G+ YN ++ GL+ + ++A+ +M K P V + I+
Sbjct: 393 KIFDWMEG--HGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIV 450
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G + +A R M E P+ Y LI +C+ ++ A+ EM G P
Sbjct: 451 ENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISP 510
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ G C++G + AL L E R G Y+ +I L + F A
Sbjct: 511 NQWTYTAMIDGYCKEGKIDVALSLFE---RMEENGCSASIETYNAIISGLSKGNRFSEAE 567
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQT-TWLLLLLLNEM 509
+M +G+ P+ +T+ SL+ L + T T L + +EM
Sbjct: 568 KFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEM 608
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 207/519 (39%), Gaps = 90/519 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I G R R ++ + D + + P+ ++++++ L E
Sbjct: 230 PDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDM 289
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G++ YTY + + LC RV D L+ M +G P+ Y +I L +
Sbjct: 290 LEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFR 349
Query: 129 NGK----VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK +G ++ + PN VT++ LI C E AL + + G + + T
Sbjct: 350 AGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQT 409
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++++ L + + A+ + + + G + G + RFL M+
Sbjct: 410 YNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMK 469
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
C P+ TY LIS +C+ G LDSA F +M GIS N TY +I G C G+ID
Sbjct: 470 ESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKID 529
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE---------------------- 326
L + + ME++ G I YN+++ GL + N+ E
Sbjct: 530 VALSLFERMEEN--GCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTS 587
Query: 327 -------------ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC-------- 363
A + +MEK P A + I G C +G V+ A+R
Sbjct: 588 LINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPT 647
Query: 364 -----------------------FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ M E+G P++ IY L+ A+C+ +V A E+
Sbjct: 648 IDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFN 707
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
M G+ P + ++ LC AL + + ++
Sbjct: 708 LMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLK 746
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 56/327 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P++ + +I G + I+ + + + + S++ +N+I+ L K + +
Sbjct: 510 PNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKF 569
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+Q + TY L+ GLC FK+ H M+ + PN+ Y +LI+ LC+
Sbjct: 570 CAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQ 629
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GKV A L + EP T+S L+ C+E
Sbjct: 630 EGKVDAAERLTENGCEPTIDTYSTLVSGLCRE---------------------------- 661
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
GR +A +++E E+ G P+++ Y L+ ++C+
Sbjct: 662 -------GRSNEASQLVENMKEK-------------------GLSPSMEIYCSLLVAHCK 695
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ +D AL++FN M + G + Y LI LC R ++ L I Q + + S +
Sbjct: 696 SLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIV 755
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQME 335
+ ++ GL +E D +++L ME
Sbjct: 756 --WTVLVDGLLQEGDSDLCMKFLYLME 780
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 201/402 (50%), Gaps = 25/402 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P FN+++ +L++ + +A++ + S V D Y++ I++KG C GF+L
Sbjct: 122 PLSNTFNNLMCLLIRSNY-FDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRL 180
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L +++ G+ PN VIY TLI CK G V A++L M+ PN T+S+L+ + K
Sbjct: 181 LAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFK 240
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+ + E G VP+ ++ C+ G V A ++ E E+G
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMT 300
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
R K + + ++ + G PN+ TYNILI+ +C+ G +D+A+ +FN +K
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+S VTY+TLI G + L +++ ME+ + + +++ Y ++ R N
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE-RCIAPSKVT-YTILIDAFARLNY 418
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
++A E MEK L P S+ I G CV GN+++A + F + E PN VIY+
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNT 478
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+IH YC+E A L+ EM G +P ++F + + LCR
Sbjct: 479 MIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCR 520
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 203/451 (45%), Gaps = 29/451 (6%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y ++ ++ LH M G P S +N L+ L ++ +A + ++++
Sbjct: 92 YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK 151
Query: 144 EP---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ +F I+I C+ V LL FG P+VV T +++ C G VM
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVML 211
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A + + G + G + G + + M+R G +PN YN LIS
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC G++D A VF +M+ GI+ +TY+ LI GLC G + + +K++ + +K G
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH--KVNKVGL 329
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN ++ G + D A+ Q++ L P V + I G+ N+ A
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E P+ V Y LI A+ + +A E+ M G +P T++ ++ GLC
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLC 449
Query: 423 RQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
GN+ A KL + +G L P S Y+ +I C++G A LL +MV G++
Sbjct: 450 VHGNMKEASKL----FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505
Query: 482 PDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
P+ ++ S + L + W LLL +M++
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P + T+I G + + ++ A DLV + PS + ++D + +
Sbjct: 366 PTLVTYNTLIAGYSK---VENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKA 422
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M SG+ D YTY++L+ GLC+ + + KL + ++PNSVIYNT+IH
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK G RA L+++M PN +F I C++E A +LL + + G P
Sbjct: 483 YCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542
Query: 182 V 182
V
Sbjct: 543 V 543
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+YD +++AY +A + M G++P+++TFN ++ L R A + E
Sbjct: 91 LYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNE- 149
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + + + +IK CE G F LL + G+ P+ + + +L+
Sbjct: 150 ---LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 33/430 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 142 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 201
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A +L++ ME E + V F+ +I + CK ++ +AL L ++ + G P+VVT +
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LCS GR DA ++L + E+ + GK + +M ++
Sbjct: 262 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 321
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TYN L++ +C LD A +F M + VTY+TLI+G C R++DG
Sbjct: 322 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 381
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ + M S G G Y +++ GL+ + D A + KQM + + P + S+ +
Sbjct: 382 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A FD M + ++ IY +I C+ +V + +L ++ G
Sbjct: 440 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 499
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A LK ++ED G LP SG Y+ LI+A G
Sbjct: 500 PNVVTYNTMISGLCSKRLLQEAYALLKKMKED------GPLPNSGTYNTLIRAHLRDGDK 553
Query: 466 QSASMLLVQM 475
+++ L+ +M
Sbjct: 554 AASAELIREM 563
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 210/449 (46%), Gaps = 31/449 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K D DLA
Sbjct: 150 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 209
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A+ ++ D + ++ LC V D L M+++G++PN V Y++LI LC
Sbjct: 210 L-NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 268
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE V A L + PD+
Sbjct: 269 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 328
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C RL K K F M K C P+V TYN LI
Sbjct: 329 TYNSLVNGFCM----------------HDRLDKAKQMFEF---MVSKDCFPDVVTYNTLI 369
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C++ ++ ++F +M G+ + VTY TLI+GL G D+ K+ + M +G
Sbjct: 370 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM--VSDG 427
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I Y+ +L GL + ++ALE M+K + + I G C G V+D
Sbjct: 428 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 487
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNVV Y+ +I C + ++EA L+K+M G LP + T+NT++
Sbjct: 488 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 547
Query: 422 CRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 548 LRDGDKAASAELIREMRSCRFVGDASTIG 576
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 212/462 (45%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + D+ + K V G YTY IL+ C +++
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL-YTYNILINCFCRRSQISLALA 103
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M G +P+ V ++L++ C ++ A +L+ M E P+ +TF+ LI
Sbjct: 104 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 163
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ G P++VT V+ LC G A+ +L +
Sbjct: 164 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK----------- 212
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME +V +N +I S C+ +D AL++F +M+ GI N VTY +LI
Sbjct: 213 --------MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LCS GR D ++L M + K + +N+++ +E + EA EKL+
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPN--LVTFNALIDAFVKEGKFVEA-------EKLY 315
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ + GFC+ ++ AK+ F+ M+ + P+VV Y+ LI +C+
Sbjct: 316 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 375
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV + +EL +EM+ G + T+ T++ GL G+ A K+ ++ + G P
Sbjct: 376 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDI 432
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC G + A + M I D + +++
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 474
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN ++ R +Q AL L +M KL P V S + G+C + DA DQM+
Sbjct: 85 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E G P+ + + LIH + EA L+ M G P T+ V++GLC++G+
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL L+ + + ++ +I +LC+ A L +M KGI P+ +T++
Sbjct: 205 LALNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 261
Query: 489 SLLICLSQQTTW 500
SL+ CL W
Sbjct: 262 SLISCLCSYGRW 273
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/530 (26%), Positives = 241/530 (45%), Gaps = 45/530 (8%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDV---LVKEDI 61
+Q P S F T++ + + + DV+ +S + P N +++ L K D
Sbjct: 86 MQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDF 145
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
LA +M+ G + T+ L+KGLCL +R+ + LL M G +PN V Y T
Sbjct: 146 GLA---VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGT 202
Query: 122 LIHSLCKNGKVGRARSLMSDME----------EPNDVTFSILICAYCKEENLVNALVLLE 171
L++ LC G A L +M +PN V + +I + CK+ + L
Sbjct: 203 LLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFL 262
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLG 215
+ G PDVV + ++ +C GR A + E ++G + G
Sbjct: 263 EMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAG 322
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K++ LK M ++G P+ TYN LI +C G +D A D+F M+ GI + V+Y+
Sbjct: 323 KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYN 382
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
LI G C GR+ + K+ + M KE I+ YN++L GL+RE + +A +M+
Sbjct: 383 VLINGYCKSGRMVEAKKLYREMM-CKEIMPTVIT-YNTLLTGLFREGKVRDAWNLFGEMK 440
Query: 336 --KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
L P + ++ + G C + ++ +A F + P++ I++CLI C+ ++
Sbjct: 441 VHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIE 500
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL---VEEDMRGIGRGSLPGSG 450
A EL ++ G P T+ ++ GLC+ G + A L +EE +G P
Sbjct: 501 IARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEE------KGCAPNLV 554
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++ L++ C+ Q LL +M K PD T + ++ LS+ +
Sbjct: 555 TFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKY 604
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 182/397 (45%), Gaps = 36/397 (9%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSL-----MSDMEE-PNDVTFSILICAYCKEENLVNAL 167
P+ + S CK+G + R+ + + DM+ P +F+ L+ A K + + +
Sbjct: 53 PDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVI 112
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
L ++ G PD +T+ ++ C+ L KV G L EM
Sbjct: 113 SLYKRMSLIGLAPDFITLNILINCYCN-------------------LNKVDFGLAVLGEM 153
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R+G PN T+ L+ C + A + M G N VTY TL+ GLC G
Sbjct: 154 LRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNT 213
Query: 288 DDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
+K+ + M + G I P Y +++ L ++ D+ E +M+ + P
Sbjct: 214 MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDV 273
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V S I G C G E AK F++M++EG PNVV ++ LI A C+ ++ EA+ L+K
Sbjct: 274 VAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKL-VEEDMRGIGRGSLPGSGHYSPLIKALC 460
M G P T+NT++ G C +G + A L V + +GI ++ Y+ LI C
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAV----SYNVLINGYC 389
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ G A L +M+ K I+P +T+N+LL L ++
Sbjct: 390 KSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFRE 426
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
IS +N++L + + + + + K+M L P + ++ I +C V+
Sbjct: 92 ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLG 151
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+ G PN V + L+ C R+ EA+ L+++M GY P T+ T+L+GLC G
Sbjct: 152 EMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTG 211
Query: 426 NVGTALKLVEEDMRGIGRGSL---PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
N A+KL EE + G G + P Y +I +LC+ G L ++M G+GI P
Sbjct: 212 NTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISP 271
Query: 483 DYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
D + ++S++ + W L NEMV
Sbjct: 272 DVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 6/213 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + T++ GL R + D + ++TP +N +LD L K + L+ A
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN-HLSEAME 469
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + Q + L+ GLC ++ +L + + G++PN + Y +IH LC
Sbjct: 470 LFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLC 529
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ A+ L MEE PN VTF+ L+ +C+ + + + LL++ F PD
Sbjct: 530 KSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAS 589
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
TI+ V++LL + + + +L QG+ G+
Sbjct: 590 TISIVVDLLSKDEKYREYLHLLPTFPAQGQTGR 622
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 352 CVDGNVE--DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
C G+++ +A F+ +I+ P + ++ L+ A + +R + L K M+ G P
Sbjct: 66 CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T N +++ C V L ++ E +R RG P + ++ L+K LC A+
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLR---RGHSPNTVTFTSLVKGLCLGSRISEAT 182
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
LL +MV G P+ +T+ +LL L +L + L+E
Sbjct: 183 GLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHE 221
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/524 (26%), Positives = 246/524 (46%), Gaps = 67/524 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + +I GL ++ +++ + + + + ++PSL ++ ++ L+K E ID A
Sbjct: 289 PNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCV 348
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M G ++ Y L+ G C + + K+ M S+G+ PNSV N+LI C
Sbjct: 349 L-KEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFC 407
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ ++G+A +++ +M N +FS++I C + V AL + + P+
Sbjct: 408 KSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDG 467
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+T ++ LC G+ +AVE+ CR L KG +PN+ T N LI
Sbjct: 468 LLTTLVSGLCKAGKQGEAVELW---------------CRLLG----KGFVPNIVTSNALI 508
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G + L + DM G+ ++ +TY+TLI G C G++ +G ++ + M K+G
Sbjct: 509 HGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEM--VKKG 566
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ I +N +L+GL ++ DEA + +K P + I G+C VE+ +
Sbjct: 567 IQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++++ + N V+Y+ LI AYC + A L +M G L +T+++++ GL
Sbjct: 627 NLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGL 686
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPG---------------------------SGH--- 451
C G V A L++E MR G LP S H
Sbjct: 687 CNIGLVDDAKHLLDE-MR--KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743
Query: 452 -----YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
Y+ +I C+ G + A+ LL +M KGILPD +T+N+
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAF 787
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 208/454 (45%), Gaps = 24/454 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E ++ T+I G + I++ +K D + ++P+ NS++ K D
Sbjct: 359 PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENV 418
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ G+ + ++++++ LCL R + M R ++PN + TL+ LCK
Sbjct: 419 LEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCK 478
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK G A L + PN VT + LI CK N+ L LL G V D +T
Sbjct: 479 AGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRIT 538
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ C G+V + E+ EE ++G K+ R E +
Sbjct: 539 YNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK 598
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G +PNV TY ++I YC+ ++ ++ N++ + N V Y++LIR C G ++
Sbjct: 599 KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMN 658
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
++ M+ G + Y+S+++GL D+A L +M K L P V +
Sbjct: 659 AAFRLRDDMKS--RGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTT 716
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+ G + +M PN Y +I +C+ + +EA++L+ EMT G
Sbjct: 717 IIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKG 776
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LP A T+N +GLC++G V A K+ +E G
Sbjct: 777 ILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSG 810
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 196/448 (43%), Gaps = 61/448 (13%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
T L+ L N + +++ + G+ P+ +++T+I++ CK + A L S M
Sbjct: 223 TCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKM 282
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
E+ PN VT++ +I CK L A EK P ++T + + L + ++
Sbjct: 283 EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKI 342
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+A C LKEM G +PN YN LI YC+ G + AL +
Sbjct: 343 DEA------------------NC-VLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS----KEGSKGRISPY--- 311
+DM GIS N VT ++LI+G C +I +L+ M +GS + +
Sbjct: 384 RDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443
Query: 312 --------------------------NSVLYGLYRENQQDEALE-YLKQMEKLF-PRAVD 343
+++ GL + +Q EA+E + + + K F P V
Sbjct: 444 KFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVT 503
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I G C GN+++ + M+E G V + + Y+ LI C+E +V+E EL +EM
Sbjct: 504 SNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMV 563
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P TFN +L GLC + A +L E + G +P Y +I C+
Sbjct: 564 KKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKN---GYVPNVYTYGVMIDGYCKAN 620
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ LL ++V K + + + +NSL+
Sbjct: 621 KVEEGENLLNELVSKKLELNSVVYNSLI 648
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 42/256 (16%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ +KG P++ T L+SS + L + +V++ + + GI + + T+I C G R
Sbjct: 212 LAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHR 271
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDR 344
DD + GL+ +MEKL P V
Sbjct: 272 EDDAI-------------------------GLF------------SKMEKLGVAPNVVTY 294
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C G +++A R ++M++E P+++ Y I+ + E++ EA+ ++KEM+
Sbjct: 295 NNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSE 354
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G++P +NT++ G C+ GN+ ALK + +DM + +G P S + LI+ C+
Sbjct: 355 LGFVPNEVVYNTLIDGYCKMGNISEALK-IRDDM--LSKGISPNSVTLNSLIQGFCKSDQ 411
Query: 465 FQSASMLLVQMVGKGI 480
A +L +M+G+G+
Sbjct: 412 IGQAENVLEEMIGRGL 427
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G + +N V +S N+ P+ + ++D K A
Sbjct: 709 PNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKL 768
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M G+ D TY GLC +V + FK+ M S V + + Y TLI
Sbjct: 769 LNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 226/474 (47%), Gaps = 39/474 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ +VVK V TP LK + D + +D+ ++M G D ++Y
Sbjct: 115 LGNVVKKGFRVDAITFTPLLKGLCA--DKRTSDAMDIVL----RRMTELGCIPDVFSYNN 168
Query: 87 LMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
L+KGLC NR + +LLH+M + G P+ V YNT+++ K G +A S +M
Sbjct: 169 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML 228
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ VT+S +I A CK + + A+ +L G +PD +T +L CS G+
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+ L K+M G PNV TY+ L++ C+ G A +F
Sbjct: 289 EAIGTL-------------------KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ + TY TL++G + G + + +L LM + G + +N ++
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM--VRNGIQPDHHVFNILICAYA 387
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
++ + D+A+ +M + L P V I C G+V+DA F+QMI+EG PN++
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y LIH C ++ +A EL+ EM G FN+++ C++G V + KL +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G P Y+ LI C G A+ LL MV G+ PD +T+ +L+
Sbjct: 508 VR---IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 226/478 (47%), Gaps = 44/478 (9%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + +N++L+ KE D D A + Y + M+ G+ D TY+ ++ LC + +
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHE-MLDRGILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGK----VGRARSLMSDMEEPNDVTFSILICAYC 158
+L+ M GV P+ + YN+++H C +G+ +G + + SD EPN VT+S L+ C
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K A + + G PD+ T +L+ + G +++ +L+
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL----------- 366
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M R G P+ +NILI +Y + +D A+ VF+ M+ G++ N V Y T+I
Sbjct: 367 --------MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---- 334
LC G +DD + + M D EG I Y S+++GL ++ D+A E + +M
Sbjct: 419 DVLCKSGSVDDAMLYFEQMID--EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 335 ---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
+F ++ I C +G V ++++ FD M+ G P+++ Y+ LI C +
Sbjct: 477 ICLNTIFFNSI-----IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ EA++L+ M G P T+ T+++G CR + AL L +E + G P
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE---MVSSGVSPNIIT 588
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLN 507
Y+ +++ L +A L V + G + T+N +L +C + T L + N
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 646
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 225/527 (42%), Gaps = 59/527 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I L +A+ ++ ++ + + + + P +NSIL
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM + GV+ + TY+ LM LC R + K+ M RG++P+ Y TL+
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +L+ M +P+ F+ILICAY K+E + A+++ K G P+VV
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
V+++LC G V DA+ + ++M +G PN+ Y LI
Sbjct: 414 YGTVIDVLCKSGSVDDAM-------------------LYFEQMIDEGLTPNIIVYTSLIH 454
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C D A ++ +M GI N + ++++I C GR+ + K+ LM + G
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM--VRIGV 512
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKR 362
K I YN+++ G + DEA + L M + P V I G+C ++DA
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F +M+ G PN++ Y+ ++ R A EL +T G ST+N +L GLC
Sbjct: 573 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632
Query: 423 RQGNVGTALKLVEE----DMR--------------GIGR--------------GSLPGSG 450
+ AL++ + D++ GR G +P
Sbjct: 633 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 692
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
YS + + L E+G + L + M G D NS++ L Q+
Sbjct: 693 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 739
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 204/440 (46%), Gaps = 36/440 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + + T+++G + ++ DL+ R + P +FN ++ K E +D A
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ + Y ++ LC + V D M G+ PN ++Y +LIH LC
Sbjct: 399 F-SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A L+ +M + N + F+ +I ++CKE ++ + L + G PD++
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C G++ +A + L M G P++ TY LI
Sbjct: 518 TYNTLIDGCCLAGKMDEAT-------------------KLLASMVSVGVKPDIVTYGTLI 558
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC +D AL +F +M G+S N +TY+ +++GL R ++ + +K G
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY--VSITKSG 616
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDRSLKILGFCVDGNVED 359
++ +S YN +L+GL + N DEAL + + +L R + + L C G +++
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKC--GRMDE 674
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
AK F G VP+V Y + ++ + E +L M +G + N+++
Sbjct: 675 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734
Query: 420 GLCRQGNV---GTALKLVEE 436
L ++G++ GT L +++E
Sbjct: 735 KLLQRGDITRAGTYLFMIDE 754
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 166/378 (43%), Gaps = 27/378 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P T++ILI C+ L L GF D +T T +L+ LC+ R DA++I
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 205 -LEESGEQGRLGKV-------KGGCRFLKEMER------------KGCLPNVDTYNILIS 244
L E G + V KG C + E G P+V +YN +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ + G D A +++M GI + VTY ++I LC +D +++L M K G
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM--VKNGV 267
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YNS+L+G Q EA+ LK+M + + P V S + C +G +A++
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD M + G P++ Y L+ Y + + E L+ M +G P FN ++
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+Q V A+ LV MR G P Y +I LC+ G A + QM+ +G+ P
Sbjct: 388 KQEKVDQAM-LVFSKMRQHGLN--PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 483 DYLTWNSLLICLSQQTTW 500
+ + + SL+ L W
Sbjct: 445 NIIVYTSLIHGLCTCDKW 462
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/482 (28%), Positives = 222/482 (46%), Gaps = 69/482 (14%)
Query: 8 PPDESI-FITVIRGLGRARM---INDVVKATDLV---SRFNMTPSLK---IFNSILDVLV 57
PP + F+ V+ GRA +N +++ L + + PS++ +N++L L
Sbjct: 30 PPRRAAPFLAVLLRRGRAEASARLNRLLRLVPLPESPALLSSLPSVRDAVSYNTVLAALC 89
Query: 58 KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
++ L A + ++MA + +Y LM+ LC R G LL M++ GV+P+ V
Sbjct: 90 RQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVV 149
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKS 173
Y TLI LC V +A L+ +M EPN V +S L+ YCK + E+
Sbjct: 150 TYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM 209
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G PDVV T +++ LC R GKVK + + +M +G
Sbjct: 210 SGRGIEPDVVMYTGLIDSLC-------------------REGKVKKATQVMDKMMERGLE 250
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PNV TYN+LI+S C+ G + A+ + N+M G++ + VTY+TLI GL +D+ + +
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGL 310
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV 353
L+ M + + + +NSV++GL C
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGL---------------------------------CK 337
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + A + D M E G N+V ++ LI + +V++A ELM EM G P + T
Sbjct: 338 TGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFT 397
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ +++G C+ V A L+ + R G P HY PL+ ALCE+G + A
Sbjct: 398 YSILINGFCKMWQVDRAESLLSKMRRD---GIEPELVHYIPLLAALCEQGMMEQARNFFD 454
Query: 474 QM 475
+M
Sbjct: 455 EM 456
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 227/522 (43%), Gaps = 66/522 (12%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KE 59
M H ++ P + T++R L R V + + P + + +++ L
Sbjct: 105 MAH--ETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAA 162
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+D A R+ M SG++ + Y+ L++G C R K+ M RG++P+ V+Y
Sbjct: 163 DVDKAVELLRE-MCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMY 221
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL----LE 171
LI SLC+ GKV +A +M M E PN VT+++LI + CKE ++ A+ L LE
Sbjct: 222 TGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLE 281
Query: 172 KSFSFGFV---------------------------------PDVVTITKVLELLCSVGRV 198
K + V P+VVT V+ LC GR+
Sbjct: 282 KGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRM 341
Query: 199 MDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
A ++ + E G R+ KVK + EM G P+ TY+IL
Sbjct: 342 RQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSIL 401
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ +C+ +D A + + M+ DGI V Y L+ LC G ++ M +
Sbjct: 402 INGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH---K 458
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
K + Y+++++G R + A E+LK M E L P +V S+ I F G++ A
Sbjct: 459 NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAA 518
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+R QM G VP+V ++D LI Y + + EL++EMT + +T+ +
Sbjct: 519 ERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTC 578
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
L L+ V + +G++ S + ++ LC K
Sbjct: 579 LVANNEGKALLQSVPGFDTEVSKGAVISSHELTNMLHKLCNK 620
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 121/227 (53%), Gaps = 9/227 (3%)
Query: 272 VTYDTLIRGLC-SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
V+Y+T++ LC GG +D L +L++M + E +S Y +++ L E + +A+
Sbjct: 79 VSYNTVLAALCRQGGCLDAALFLLRVM--AHETRPTAVS-YTTLMRALCAERRTGQAVGL 135
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L+ M+ + P V I G C +V+ A +M E G PNVV+Y CL+ YC+
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
R S++ +EM+G G P + ++ LCR+G V A +++++ M RG P
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME---RGLEPN 252
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
Y+ LI ++C++G + A L M+ KG+ D +T+N+L+ LS
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLS 299
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
AV + + C G DA +++ P V Y L+ A C E R +A L++
Sbjct: 78 AVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLR 137
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G P T+ T++ GLC +V A++L+ E G P YS L++ C
Sbjct: 138 DMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCES---GIEPNVVVYSCLLQGYC 194
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ G ++ S + +M G+GI PD + + L+ L ++
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCRE 231
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 33/430 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A +L++ ME E + V F+ +I + CK ++ +AL L ++ + G P+VVT +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LCS GR DA ++L + E+ + GK + +M ++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TYN L++ +C LD A +F M + VTY+TLI+G C R++DG
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ + M S G G Y +++ GL+ + D A + KQM + + P + S+ +
Sbjct: 420 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A FD M + ++ IY +I C+ +V + +L ++ G
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A LK ++ED G LP SG Y+ LI+A G
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKED------GPLPNSGTYNTLIRAHLRDGDK 591
Query: 466 QSASMLLVQM 475
+++ L+ +M
Sbjct: 592 AASAELIREM 601
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 210/449 (46%), Gaps = 31/449 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K D DLA
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A+ ++ D + ++ LC V D L M+++G++PN V Y++LI LC
Sbjct: 248 L-NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE V A L + PD+
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C RL K K F M K C P+V TYN LI
Sbjct: 367 TYNSLVNGFCM----------------HDRLDKAKQMFEF---MVSKDCFPDVVTYNTLI 407
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C++ ++ ++F +M G+ + VTY TLI+GL G D+ K+ + M +G
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM--VSDG 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I Y+ +L GL + ++ALE M+K + + I G C G V+D
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNVV Y+ +I C + ++EA L+K+M G LP + T+NT++
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 422 CRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 586 LRDGDKAASAELIREMRSCRFVGDASTIG 614
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 212/462 (45%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + D+ + K V G YTY IL+ C +++
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL-YTYNILINCFCRRSQISLALA 141
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M G +P+ V ++L++ C ++ A +L+ M E P+ +TF+ LI
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ G P++VT V+ LC G A+ +L +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK----------- 250
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME +V +N +I S C+ +D AL++F +M+ GI N VTY +LI
Sbjct: 251 --------MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LCS GR D ++L M + K + +N+++ +E + EA EKL+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPN--LVTFNALIDAFVKEGKFVEA-------EKLY 353
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ + GFC+ ++ AK+ F+ M+ + P+VV Y+ LI +C+
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV + +EL +EM+ G + T+ T++ GL G+ A K+ ++ + G P
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDI 470
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC G + A + M I D + +++
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN ++ R +Q AL L +M KL P V S + G+C + DA DQM+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E G P+ + + LIH + EA L+ M G P T+ V++GLC++G+
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL L+ + + ++ +I +LC+ A L +M KGI P+ +T++
Sbjct: 243 LALNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 489 SLLICLSQQTTW 500
SL+ CL W
Sbjct: 300 SLISCLCSYGRW 311
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/420 (30%), Positives = 202/420 (48%), Gaps = 31/420 (7%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D Y L+ GLC + +LLHVM + G + V Y TLI LCK+G + A++L+
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
M + PN VT++ LI CK +A+ +++ G PD+VT ++ LC
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
R+ DA +L+E M G +P+V TYN IS C+ G LD
Sbjct: 129 NRMDDAGLVLQEL------------------MIESGRIPDVVTYNTFISGLCKAGKLDKG 170
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
L++ +M GIS + VT+ ++I GLC RIDD ++ + M + G Y+ +L
Sbjct: 171 LEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLE--RGCVPDSLTYSIML 228
Query: 316 YGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGV 373
L R N+ D E L+ M K A+ + L G++E A ++Q +E G V
Sbjct: 229 DNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCV 288
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
V ++ I A C+ + A ++ M G LP ++N V+ GLC+ GNV A KL
Sbjct: 289 MEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKL 348
Query: 434 VEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI-LPDYLTWNSLL 491
+ + G + P ++ LI C+ G A LL +M K I +PD +T+N+++
Sbjct: 349 SRKMLDSGCCK---PDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 208/444 (46%), Gaps = 35/444 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
D +I+ T+I GL +AR ++ +++ S+ + +++D L K D+D A+A
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM +G + TY L+ GLC R D + + M G +P+ V YN+LIH LC
Sbjct: 69 -QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCM 127
Query: 129 NGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++ A ++ ++ P+ VT++ I CK L L +LE+ G PDVV
Sbjct: 128 ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC R+ DA ++ K M +GC+P+ TY+I++
Sbjct: 188 TFCSIISGLCKANRIDDAFQV-------------------FKGMLERGCVPDSLTYSIML 228
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSKE 302
+ LD+ +V M G TY LI L G I+ Q ME
Sbjct: 229 DNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAME---A 285
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + +N+ + L R + A L M P + + I G C GNV+DA
Sbjct: 286 GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 345
Query: 361 KRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVL 418
+ +M++ G P+V+ ++ LI +C+ R+ +A +L+KEM +P T+NT++
Sbjct: 346 WKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405
Query: 419 SGLCRQGNVGTALKLVEEDMRGIG 442
G + G++ A KL+ E+M+ +G
Sbjct: 406 DGQSKFGSLKQA-KLLLEEMQAVG 428
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 164/387 (42%), Gaps = 60/387 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL +AR +D ++ + R P L +NS
Sbjct: 78 PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS----------------- 120
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGD-GFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
L+ GLC+ NR+ D G L +M G P+ V YNT I LC
Sbjct: 121 ------------------LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLC 162
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ + ++ +M+ P+ VTF +I CK + +A + + G VPD +
Sbjct: 163 KAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 222
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + +L+ L R+ E+LE + G R G ++ ++
Sbjct: 223 TYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQA 282
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GC+ V T+N I + C +G A ++ M G N ++Y+ +I GLC G +
Sbjct: 283 MEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNV 342
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDR 344
DD K+ + M DS K + +N+++ G + + +A + LK+M+ P V
Sbjct: 343 DDAWKLSRKMLDSG-CCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTY 401
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ I G G+++ AK ++M G
Sbjct: 402 NTMIDGQSKFGSLKQAKLLLEEMQAVG 428
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 122/259 (47%), Gaps = 39/259 (15%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN LI+ C+ AL++ + M +G + VTY TLI GLC G +D +LQ M
Sbjct: 13 YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
D+ G + Y +++ GL + + +A++ +K+
Sbjct: 73 DA--GCAPNVVTYTALIDGLCKARRPHDAIQTVKR------------------------- 105
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE-MTGHGYLPIASTFNTV 417
M+ G P++V Y+ LIH C R+ +A +++E M G +P T+NT
Sbjct: 106 --------MLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTF 157
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+SGLC+ G + L+++EE RG G P + +I LC+ A + M+
Sbjct: 158 ISGLCKAGKLDKGLEMLEEMDRG---GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLE 214
Query: 478 KGILPDYLTWNSLLICLSQ 496
+G +PD LT++ +L LS+
Sbjct: 215 RGCVPDSLTYSIMLDNLSR 233
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 200/411 (48%), Gaps = 30/411 (7%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V+ D YTY L++GLC R + +L M RG P+ V Y L+ + CK +A
Sbjct: 162 VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L+ +M + P+ VT+++++ C+E + +A+ L+ S+G P+ V+ VL+ L
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+ R DA +++E EM KGC PNV T+N+LIS C G++
Sbjct: 282 FTAERWEDAEKLME-------------------EMAHKGCPPNVVTFNMLISFLCRRGLV 322
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A++V M G + N ++Y+ L+ C +I ++ ++LM G I YN
Sbjct: 323 EPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM--VSRGCYPDIVSYN 380
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L L R + D A+E L Q++ P + + I G G ++A D+M +
Sbjct: 381 TLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSK 440
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G P+++ Y + C+E+R+ EA ++ G P A+ +N +L GLC++ A
Sbjct: 441 GLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNA 500
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ L I G +P Y+ L++ L +G + A L Q+ +G++
Sbjct: 501 IDLFA---YMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 210/428 (49%), Gaps = 33/428 (7%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
A L+K LC + R D + V+ + G P+ ++YN ++ C G++ AR L++DM
Sbjct: 108 AALIKKLCASGRTADARR---VLAASG--PDVMVYNAMVAGYCGAGQLDAARRLVADMPV 162
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
EP+ T++ LI C NAL +LE F G +PDVVT T +LE C A++
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMK 222
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L+E ++G + G+V+ FLK + GC PN +YNI++
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ A + +M G N VT++ LI LC G ++ +++L+ M + G
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM--PQYGCTPN 340
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
YN +L+ ++ + +A+E+++ M +P V + + C +G V+ A
Sbjct: 341 SLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLH 400
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q+ ++G P ++ Y+ +I + + +EA EL+ EMT G P T++T+ SGLCR+
Sbjct: 401 QLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRED 460
Query: 426 NVGTALKLV--EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+ A++ +DM G P + Y+ ++ LC++ +A L M+ G +P+
Sbjct: 461 RIEEAVRTFCKVQDM-----GIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPN 515
Query: 484 YLTWNSLL 491
T+ L+
Sbjct: 516 ESTYTILV 523
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 202/436 (46%), Gaps = 30/436 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S PD ++ ++ G A ++ A LV+ + P +N+++ L
Sbjct: 130 SGPDVMVYNAMVAGYCGAGQLD---AARRLVADMPVEPDAYTYNTLIRGLCGRGRTSNAL 186
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M G D TY IL++ C + KLL M +G P+ V YN +++ +
Sbjct: 187 AVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGI 246
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ G+V A + ++ EPN V+++I++ E +A L+E+ G P+V
Sbjct: 247 CQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNV 306
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT ++ LC G V A+E+LE +M + GC PN +YN L
Sbjct: 307 VTFNMLISFLCRRGLVEPAMEVLE-------------------QMPQYGCTPNSLSYNPL 347
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ ++C+ + A++ M G + V+Y+TL+ LC G +D +++L ++D +
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKD--K 405
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+V+ GL + + EALE L +M + L P + S G C + +E+A
Sbjct: 406 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEA 465
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R F ++ + G P +Y+ ++ C+ A +L M G +P ST+ ++ G
Sbjct: 466 VRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEG 525
Query: 421 LCRQGNVGTALKLVEE 436
L +G V A +L +
Sbjct: 526 LAYEGLVKEARELFAQ 541
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 158/337 (46%), Gaps = 38/337 (11%)
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
LV++L L P I K LC+ GR DA +L SG
Sbjct: 89 LVDSLAGLNPPSPAAVGPCAALIKK----LCASGRTADARRVLAASG------------- 131
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
P+V YN +++ YC G LD+A + DM ++ ++ TY+TLIRGLC
Sbjct: 132 -----------PDVMVYNAMVAGYCGAGQLDAARRLVADMPVEPDAY---TYNTLIRGLC 177
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GR + L +L+ M + G + Y +L + + +A++ L +M P
Sbjct: 178 GRGRTSNALAVLEDM--FRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPD 235
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ + G C +G VEDA + G PN V Y+ ++ ER +A +LM+
Sbjct: 236 IVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLME 295
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM G P TFN ++S LCR+G V A++++E+ + G P S Y+PL+ A C
Sbjct: 296 EMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ---YGCTPNSLSYNPLLHAFC 352
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++ A + MV +G PD +++N+LL L +
Sbjct: 353 KQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRN 389
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 175/372 (47%), Gaps = 29/372 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + ++ + +K D + P + +N +L+ + +E ++ A F
Sbjct: 199 PDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEF 258
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K + + G + + +Y I++KGL R D KL+ M +G PN V +N LI LC
Sbjct: 259 L-KNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLC 317
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G V A ++ M + PN ++++ L+ A+CK++ + A+ +E S G PD+V
Sbjct: 318 RRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIV 377
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC G V A+E+L +++ KGC P + +YN +I
Sbjct: 378 SYNTLLTALCRNGEVDVAIELLH-------------------QLKDKGCSPVLISYNTVI 418
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ G AL++ ++M G+ + +TY T+ GLC RI++ ++ ++D G
Sbjct: 419 DGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM--G 476
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ + YN++L GL + + A++ M P ++ + G +G V++A+
Sbjct: 477 IRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEAR 536
Query: 362 RCFDQMIEEGGV 373
F Q+ G V
Sbjct: 537 ELFAQLCSRGVV 548
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 15/184 (8%)
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDR----SLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
L R + D+AL + + L P + + I C G DA+R +
Sbjct: 77 LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARR-----VLAASG 131
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+V++Y+ ++ YC ++ A L+ +M P A T+NT++ GLC +G AL +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMPVE---PDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+E+ R RG LP Y+ L++A C++ G++ A LL +M KG PD +T+N +L
Sbjct: 189 LEDMFR---RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNG 245
Query: 494 LSQQ 497
+ Q+
Sbjct: 246 ICQE 249
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 39/248 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ F +I L R ++ ++ + + ++ TP+ +N +L K+
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ G D +Y L+ LC V +LLH +K +G P + YNT+I L
Sbjct: 363 FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLT 422
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEE---------------------- 161
K GK A L+ +M +P+ +T+S + C+E+
Sbjct: 423 KAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAA 482
Query: 162 -------------NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
NA+ L S G +P+ T T ++E L G V +A E+ +
Sbjct: 483 LYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542
Query: 209 GEQGRLGK 216
+G + K
Sbjct: 543 CSRGVVNK 550
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 235/510 (46%), Gaps = 43/510 (8%)
Query: 14 FITVIRGLGRARMINDVVKA-TDLVSRF-NMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
I+++R L + ++D + L ++F +++PSL ++N +L ++ ++
Sbjct: 81 LISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSD 140
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+A+ V YT+ +L+ LC + +L M +G PN L+ LC+ G
Sbjct: 141 MLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGL 200
Query: 132 VGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
V +A L+++ N V ++ L+ +C+EE A L+E+ G +PDVVT
Sbjct: 201 VKQALELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSR 260
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC G+VM+A I + LG + PNV T+N+++ +C+
Sbjct: 261 ISALCRAGKVMEASRIFRDMQMDAELGLPR---------------PNVVTFNLMLKGFCK 305
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G++ A + MK G + Y+ + GL G + + +L M +G +
Sbjct: 306 HGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEM--VAKGIEPNA 363
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN ++ GL R + +A + M + ++P V S + G+C G V +AK +
Sbjct: 364 YTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHE 423
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MI G PN + L+H+ +E R EA E++++M Y P T N V++GLCR G
Sbjct: 424 MIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGE 483
Query: 427 VGTALKLVEEDM--------RGIGRGSLPGSGH-----------YSPLIKALCEKGGFQS 467
+ A ++V E +G SL S H Y+ LI LC+ G +
Sbjct: 484 LDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEE 543
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A ++M+ K + PD +T+++ + +Q
Sbjct: 544 AKKKFIEMLAKNLRPDSVTYDTFIWSFCKQ 573
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 233/501 (46%), Gaps = 21/501 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +++G + M+ D + + + SL+ +N L L++ L
Sbjct: 291 PNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLV 350
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+A G++ + YTY I+M GLC + + D L+ +M GV P++V Y+TL+H C
Sbjct: 351 LDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCS 410
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A+S++ +M +PN T + L+ + KE + A +L+K + PD VT
Sbjct: 411 RGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVT 470
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG--CRFLKEMER-KGCLPNVDTYNI 241
V+ LC G + A EI+ E G KG + + CLP+ TY
Sbjct: 471 CNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTT 530
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI+ C+ G L+ A F +M + + VTYDT I C G+I ++L+ ME +
Sbjct: 531 LINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDME--R 588
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G + YN+++ GL NQ E +M++ + P + I C G +D
Sbjct: 589 NGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKD 648
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK---EMTGHGYLPIASTFNT 416
A +M+++G PNV + LI A+ + + A EL + + G + FN
Sbjct: 649 AISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNE 708
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+G G + A +L E + R + Y LI LC+ A+ LL +++
Sbjct: 709 LLAG----GQLSEAKELFEV---SLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLI 761
Query: 477 GKGILPDYLTWNSLLICLSQQ 497
KG D+ ++ ++ LS++
Sbjct: 762 DKGYGFDHASFMPVIDGLSKR 782
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 21/226 (9%)
Query: 306 GRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
R++P +N +++ L D AL+ ++M + P + + G C G V+
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + + N V+Y+ L+ +C+EE EA L++ M G LP TFN+ +S
Sbjct: 204 ALELVNNN-NSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRIS 262
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSG--HYSPLIKALCEKGGFQSASMLLVQMVG 477
LCR G V A ++ DM+ LP ++ ++K C+ G A L+ M
Sbjct: 263 ALCRAGKVMEASRIF-RDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKK 321
Query: 478 KGILPDYLTWNSLLICLSQQTTWLLLLLLN-EMVSFVMVVHELSAK 522
G +N WL+ LL N E++ +V+ E+ AK
Sbjct: 322 VGNFDSLECYN----------IWLMGLLRNGELLEARLVLDEMVAK 357
>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
Length = 1090
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 238/512 (46%), Gaps = 30/512 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PDE + T+I G IN + + R + PS+ + +++D + ID A +
Sbjct: 257 PDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSV 316
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +GV + TY+ L+ G C + +G L+ +KSRG+ N + LI C
Sbjct: 317 L-SEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFC 375
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ +A+ ++ M E P+ VT+S LI C+ + +L + G +P+ V
Sbjct: 376 QVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDV 435
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C G V A++ + +G R G + F + M
Sbjct: 436 LYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYM 495
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R N ++N +I SYC G + A V++DM G S N TY L+RGLC GG +
Sbjct: 496 SRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHL 555
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ + + D + +N++L G+ + DEAL+ ++M K P +
Sbjct: 556 VQAKQFMFCLLDIPSAVDEK--TFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYT 613
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT-G 404
+ + GFC G + A M+E+G VP+ V Y CL++ E +V+ AS + +E+
Sbjct: 614 ILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICK 673
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G +N++++G + GNV T +K + DM P S Y+ L+ ++G
Sbjct: 674 EGLYADCIAYNSLMNGYLKGGNVNT-IKRMMSDM--YQNEVYPNSASYNILMHGYVKRGQ 730
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
F + L MV KGI PD +T+ L++ LS+
Sbjct: 731 FSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 762
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 224/512 (43%), Gaps = 28/512 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+ +F +I+ + R + D A + S NSIL LV+E +
Sbjct: 84 NHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESKYVWLFL 143
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++ +A D T IL+ LC +L MKS + NS YNT++H K
Sbjct: 144 RESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKSCCL-SNSATYNTILHWYVKK 202
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A ++ DME + + T++I+I C+ + A +LL++ PD T
Sbjct: 203 GRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTY 262
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR---------FLKEMER 229
++ G++ A + Q + V G CR L EME
Sbjct: 263 NTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEI 322
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G +P+ TY+ L++ YC+ +L ALD+ D+K GI+ N LI G C G I
Sbjct: 323 TGVMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISK 382
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+IL+ M + +G + Y++++ G+ R + E E L +M+K + P V +
Sbjct: 383 AKQILKSMLE--DGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTL 440
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I +C G V+ A + F + G V N VI++ L+ A+ +E + EA + M+
Sbjct: 441 ICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNI 500
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+ +FN ++ C +G + A + ++ +R G P Y L++ LC+ G
Sbjct: 501 SFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVR---YGHSPNVCTYQNLLRGLCQGGHLVQ 557
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
A + ++ D T+N+LL+ + + T
Sbjct: 558 AKQFMFCLLDIPSAVDEKTFNALLLGICKYGT 589
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 129/556 (23%), Positives = 232/556 (41%), Gaps = 104/556 (18%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M+ G+ D TY+ L+ G+C ++ + ++L M+ G+ PN V+Y TLI CK
Sbjct: 388 KSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKA 447
Query: 130 GKVGRA--------------------------------------RSLMSDME-EPNDVTF 150
G V A R MS M N V+F
Sbjct: 448 GYVKVALKHFVDIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSF 507
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA-------VE 203
+ +I +YC +V A + + +G P+V T +L LC G ++ A ++
Sbjct: 508 NCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLD 567
Query: 204 ILEESGEQGRLGKVKGGCRF---------LKEMERKGCLPNVDTYNILISSYCETGVLDS 254
I E+ + G C++ ++M + CLP++ TY IL+S +C G +
Sbjct: 568 IPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILP 627
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ-----------------LM 297
AL + M G+ + V Y L+ GL + G++ + Q LM
Sbjct: 628 ALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLM 687
Query: 298 EDSKEGS-------------KGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LF 338
+G + + P YN +++G + Q ++L K M + +
Sbjct: 688 NGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR 747
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V L ILG G ++ A + ++M+ EG P+ +++D LI ++ ++ ++ A L
Sbjct: 748 PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRL 807
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M P + TF+ +++GL R+ + + +++ E ++ G P HY L+ A
Sbjct: 808 FNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQ---VGLQPNHTHYIALVNA 864
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM------- 509
C G A L +M GI+P + +S++ +C + +++ N M
Sbjct: 865 KCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPT 924
Query: 510 -VSFVMVVHELSAKEK 524
+F ++H L + K
Sbjct: 925 VATFTTLMHSLCKESK 940
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 229/532 (43%), Gaps = 61/532 (11%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMA 74
++R R MI + +SR N++ + FN I+D + AF M+
Sbjct: 474 ALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRG-KIVEAFSVYDDMVR 532
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
G + TY L++GLC + + + + + +N L+ +CK G +
Sbjct: 533 YGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDE 592
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A + M + P+ T++IL+ +C++ ++ ALV+L+ G VPD V T +L
Sbjct: 593 ALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLN 652
Query: 191 LLCSVGRVMDAVEILEESGEQGRL------------GKVKGGC-----RFLKEMERKGCL 233
L + G+V A + +E + L G +KGG R + +M +
Sbjct: 653 GLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVY 712
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN +YNIL+ Y + G +L ++ M GI + VTY LI GL G ID +K
Sbjct: 713 PNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKF 772
Query: 294 LQLM--------------------EDSKEGSKGRI---------SP----YNSVLYGLYR 320
L+ M E SK + R+ SP +++++ GL R
Sbjct: 773 LEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIR 832
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+N D++ E L +M + L P + C G ++ A R ++M G VP V
Sbjct: 833 KNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVA 892
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
+I C+ ++ EA + M G +P +TF T++ LC++ + AL L + +
Sbjct: 893 ESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHL--KRL 950
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ R + Y+ LI LC+ A L +M KG+ P+ T+ +L
Sbjct: 951 MELCRLKVDVVS-YNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITL 1001
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 190/463 (41%), Gaps = 60/463 (12%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
I S DE F ++ G+ + +++ + + + + N P + + +L ++ L
Sbjct: 568 IPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILP 627
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV-GDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ M+ GV D Y L+ GL +V + ++ G+ + + YN+L+
Sbjct: 628 ALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLM 687
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ K G V + +MSDM + PN +++IL+ Y K +L L + G
Sbjct: 688 NGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIR 747
Query: 180 PDVVTI----------------TKVLELLCSVG-------------------------RV 198
PD VT K LE + G R+
Sbjct: 748 PDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRL 807
Query: 199 MDAVEILEESGEQGRLGKVKGGC----------RFLKEMERKGCLPNVDTYNILISSYCE 248
+ ++ L S + G L EM + G PN Y L+++ C
Sbjct: 808 FNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCR 867
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G +D A + +MK GI V ++IRGLC G++++ + + M S G +
Sbjct: 868 VGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRS--GMVPTV 925
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
+ + ++++ L +E++ +AL + ME +L V ++ I G C D ++ DA + +
Sbjct: 926 ATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGE 985
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
M +G PNV Y L A R++ EL++++ G +P
Sbjct: 986 MKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 135/298 (45%), Gaps = 29/298 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD+ +F +I +++ ++ + + +++PS K F+++++ L++++
Sbjct: 783 PDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEV 842
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+Q + Y L+ C + F+L MK+ G+ P V +++I LC+
Sbjct: 843 LHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCR 902
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A + S+M P TF+ L+ + CKE + +AL L DVV+
Sbjct: 903 CGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVS 962
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC + DA+++ EM+ KG PNV TY L
Sbjct: 963 YNVLITGLCKDKHISDALDLY-------------------GEMKSKGLWPNVTTYITLTG 1003
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ TG + + ++ D++ G+ F + L R R++D ++ L ++ ++
Sbjct: 1004 AMYSTGRMQNGEELLEDIEERGLIPAFKQLENLER------RMEDAIRRLNMIRRCRK 1055
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 142/344 (41%), Gaps = 19/344 (5%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
++ ++ + T + S L + + S N V ++ LI+ ++ D + M+D
Sbjct: 58 HLAVTGFSCTAIFTSLLRIISRFD----STNHVVFELLIKAYVKERKVLDAAVAVFFMDD 113
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFPRAVDRSLKILG-FCVDGNV 357
G K NS+L L E + +L++ + + FP V +L C +G
Sbjct: 114 C--GFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEF 171
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
A+ +M + + N Y+ ++H Y ++ R + A ++++M T+N +
Sbjct: 172 RKAEDMLQKM-KSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIM 230
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ LCR A L++ MR P Y+ LI +G A + M+
Sbjct: 231 IDKLCRIKRSARAFLLLKR-MRK--DDLTPDECTYNTLINGFFGEGKINHARCVFNHMLR 287
Query: 478 KGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSFVMVVHELSAK---EKRCKLRSLN 532
+ ++P T+ +++ C +++ L +L ++ VM EL+ CK+ L
Sbjct: 288 QTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMP-SELTYSALLNGYCKVSMLG 346
Query: 533 -HLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHVFCSSSSLKDV 575
L G+ I+ T T +ID ++G + + LK +
Sbjct: 347 PALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSM 390
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 239/511 (46%), Gaps = 72/511 (14%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
I+ P+ F V+ RA M+ + ++ L+ + + P L I N+ + VLVK + L
Sbjct: 228 IERSPEA--FSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGN-KLE 284
Query: 65 RAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+A + ++M +G++ D +Y L+KG C +R+ D +L+ M +G P+ V Y T++
Sbjct: 285 KALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVM 344
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LCK+ KV + LM +M + P+ VT++ LI A K + +ALV L ++ GF
Sbjct: 345 AFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGF 404
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
D V + V++ C + + K K + +M KGC P+V T
Sbjct: 405 HIDKVGYSAVVDSFC----------------KNKNIDKAKS---LVIDMYSKGCNPDVVT 445
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y +I +C G +D A + M G N VTY L+ GLC G+ + +++ + E
Sbjct: 446 YTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSE 505
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGN 356
+ Y++V++GL RE + EA + ++M EK F P VD +L I C + N
Sbjct: 506 EHWWTPNA--ITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQN 563
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ---------------------------- 388
V AK+ ++ + +G NVV + +I+ +CQ
Sbjct: 564 VVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTT 623
Query: 389 -------EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+ R+ EASEL+ +M G G P T+ V+ C+ G V +KL+E + I
Sbjct: 624 LFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLE---KMI 680
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
R P Y+ +I+ LC G + A LL
Sbjct: 681 ARQ--PFKTVYNQVIEKLCYFGNREEAEKLL 709
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 221/467 (47%), Gaps = 28/467 (5%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
++ ++LD+L K + + M G++ ++ +M + + ++L +M
Sbjct: 199 VYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLM 258
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
+ GV+P+ I NT I+ L K K+ +A + M+ EP+ V+++ LI YC +
Sbjct: 259 QKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRI 318
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--------- 214
+AL L+ + G PD V+ V+ LC +V + ++E + L
Sbjct: 319 DDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNT 378
Query: 215 --------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
G FL+E E KG + Y+ ++ S+C+ +D A + DM G
Sbjct: 379 LIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKG 438
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + VTY +I G C G+ID+ K+LQ M K G K Y +L GL + E
Sbjct: 439 CNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM--YKHGCKPNTVTYTVLLNGLCHNGKSLE 496
Query: 327 ALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A E + E+ + P A+ S + G +G + +A +MIE+G +PN V + LI
Sbjct: 497 AREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQ 556
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+ C+ + V A + ++E G F +V+ G C+ G++ AL ++ EDM +
Sbjct: 557 SLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSML-EDMYLSNKH 615
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + Y+ L AL +K AS L+V+M+GKGI P +T+ +++
Sbjct: 616 --PDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVI 660
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 184/425 (43%), Gaps = 64/425 (15%)
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALV 168
+ ++++Y T++ L K AR ++ M E + FS ++ +Y + L NAL
Sbjct: 194 RHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALR 253
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
+L G PD+ + +L + K++ RFL+ M+
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLV-------------------KGNKLEKALRFLERMK 294
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P++ +YN LI YC+ +D AL++ +M G + V+Y T++ LC +++
Sbjct: 295 VAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVE 354
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK------------ 336
+ ++++ M + +++ YN+++Y L + D+AL +L++ E+
Sbjct: 355 EVKRLMENMVQNSNLIPDQVT-YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSA 413
Query: 337 -------------------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
P V + I GFC G +++AK+ QM + G
Sbjct: 414 VVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHG 473
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PN V Y L++ C + EA E++ H + P A T++ V+ GL R+G + A
Sbjct: 474 CKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEAC 533
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L E I +G LP + LI++LC A L + + KG + + + S++
Sbjct: 534 DLTRE---MIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVI 590
Query: 492 ICLSQ 496
Q
Sbjct: 591 YGFCQ 595
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 197/477 (41%), Gaps = 64/477 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
PPD+ + TV+ L + R + +V + ++V N+ P +N+++ L K D A
Sbjct: 334 PPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDAL 393
Query: 66 AFYRKK----------------------------------MMASGVQGDDYTYAILMKGL 91
F R+ M + G D TY ++ G
Sbjct: 394 VFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGF 453
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
C ++ + K+L M G KPN+V Y L++ LC NGK AR +++ EE PN
Sbjct: 454 CRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNA 513
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+T+S ++ +E L A L + GF+P+ V I +++ LC
Sbjct: 514 ITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLC-------------- 559
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
R V G ++L+E KGC NV + +I +C+ G LD+AL + DM +
Sbjct: 560 -----RNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNK 614
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ +TY TL L R+D+ +++ M +G Y +V++ + + D+
Sbjct: 615 HPDAITYTTLFDALGKKSRLDEASELIVKM--LGKGIDPTPVTYRAVIHRFCQWGRVDDM 672
Query: 328 LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++ L++M P + I C GN E+A++ +++ + LI +Y
Sbjct: 673 MKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYL 732
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+ A ++ +M +P V L G A L+ +R + RG
Sbjct: 733 IDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLM---LRFVERG 786
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 226/474 (47%), Gaps = 39/474 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ +VVK V TP LK + D + +D+ ++M G D ++Y
Sbjct: 115 LGNVVKKGFRVDAITFTPLLKGLCA--DKRTSDAMDIVL----RRMTELGCIPDVFSYNN 168
Query: 87 LMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
L+KGLC NR + +LLH+M + G P+ V YNT+++ K G +A S +M
Sbjct: 169 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEML 228
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ VT+S +I A CK + + A+ +L G +PD +T +L CS G+
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPK 288
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+ L K+M G PNV TY+ L++ C+ G A +F
Sbjct: 289 EAIGTL-------------------KKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 329
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ + TY TL++G + G + + +L LM + G + +N ++
Sbjct: 330 DSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLM--VRNGIQPDHHVFNILICAYA 387
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
++ + D+A+ +M + L P V I C G+V+DA F+QMI+EG PN++
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y LIH C ++ +A EL+ EM G FN+++ C++G V + KL +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G P Y+ LI C G A+ LL MV G+ PD +T+ +L+
Sbjct: 508 VR---IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLI 558
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 226/478 (47%), Gaps = 44/478 (9%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + +N++L+ KE D D A + Y + M+ G+ D TY+ ++ LC + +
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHE-MLDRGILPDVVTYSSIIAALCKAQAMDKAME 257
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGK----VGRARSLMSDMEEPNDVTFSILICAYC 158
+L+ M GV P+ + YN+++H C +G+ +G + + SD EPN VT+S L+ C
Sbjct: 258 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLC 317
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K A + + G PD+ T +L+ + G +++ +L+
Sbjct: 318 KNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDL----------- 366
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M R G P+ +NILI +Y + +D A+ VF+ M+ G++ N V Y T+I
Sbjct: 367 --------MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---- 334
LC G +DD + + M D EG I Y S+++GL ++ D+A E + +M
Sbjct: 419 DVLCKSGSVDDAMLYFEQMID--EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476
Query: 335 ---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
+F ++ I C +G V ++++ FD M+ G P+++ Y+ LI C +
Sbjct: 477 ICLNTIFFNSI-----IDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ EA++L+ M G P T+ T+++G CR + AL L +E + G P
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE---MVSSGVSPNIIT 588
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLN 507
Y+ +++ L +A L V + G + T+N +L +C + T L + N
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 646
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 225/527 (42%), Gaps = 59/527 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I L +A+ ++ ++ + + + + P +NSIL
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM + GV+ + TY+ LM LC R + K+ M RG++P+ Y TL+
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +L+ M +P+ F+ILICAY K+E + A+++ K G P+VV
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
V+++LC G V DA+ + ++M +G PN+ Y LI
Sbjct: 414 YGTVIDVLCKSGSVDDAM-------------------LYFEQMIDEGLTPNIIVYTSLIH 454
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C D A ++ +M GI N + ++++I C GR+ + K+ LM + G
Sbjct: 455 GLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM--VRIGV 512
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKR 362
K I YN+++ G + DEA + L M + P V I G+C ++DA
Sbjct: 513 KPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALA 572
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F +M+ G PN++ Y+ ++ R A EL +T G ST+N +L GLC
Sbjct: 573 LFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC 632
Query: 423 RQGNVGTALKLVEE----DMR--------------GIGR--------------GSLPGSG 450
+ AL++ + D++ GR G +P
Sbjct: 633 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVR 692
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
YS + + L E+G + L + M G D NS++ L Q+
Sbjct: 693 TYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQR 739
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/440 (25%), Positives = 204/440 (46%), Gaps = 36/440 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + + T+++G + ++ DL+ R + P +FN ++ K E +D A
Sbjct: 339 PDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLV 398
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ + Y ++ LC + V D M G+ PN ++Y +LIH LC
Sbjct: 399 F-SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLC 457
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A L+ +M + N + F+ +I ++CKE ++ + L + G PD++
Sbjct: 458 TCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 517
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C G++ +A + L M G P++ TY LI
Sbjct: 518 TYNTLIDGCCLAGKMDEAT-------------------KLLASMVSVGVKPDIVTYGTLI 558
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC +D AL +F +M G+S N +TY+ +++GL R ++ + +K G
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL--YVSITKSG 616
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDRSLKILGFCVDGNVED 359
++ +S YN +L+GL + N DEAL + + +L R + + L C G +++
Sbjct: 617 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKC--GRMDE 674
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
AK F G VP+V Y + ++ + E +L M +G + N+++
Sbjct: 675 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVR 734
Query: 420 GLCRQGNV---GTALKLVEE 436
L ++G++ GT L +++E
Sbjct: 735 KLLQRGDITRAGTYLFMIDE 754
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 166/378 (43%), Gaps = 27/378 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P T++ILI C+ L L GF D +T T +L+ LC+ R DA++I
Sbjct: 90 PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149
Query: 205 -LEESGEQGRLGKV-------KGGCRFLKEMER------------KGCLPNVDTYNILIS 244
L E G + V KG C + E G P+V +YN +++
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ + G D A +++M GI + VTY ++I LC +D +++L M K G
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTM--VKNGV 267
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YNS+L+G Q EA+ LK+M + + P V S + C +G +A++
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD M + G P++ Y L+ Y + + E L+ M +G P FN ++
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+Q V A+ LV MR G P Y +I LC+ G A + QM+ +G+ P
Sbjct: 388 KQEKVDQAM-LVFSKMRQHGLN--PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444
Query: 483 DYLTWNSLLICLSQQTTW 500
+ + + SL+ L W
Sbjct: 445 NIIVYTSLIHGLCTCDKW 462
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 202/414 (48%), Gaps = 42/414 (10%)
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
+ ++++ GLC + RV D +LL M GV N++ YN+L+ + GR + ++
Sbjct: 132 FAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 191
Query: 142 ME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
ME E T++IL+ + ++ L + + V DV T V+ C G
Sbjct: 192 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 251
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ A ++L+E +G G PN TY +LI +C+ G +++A
Sbjct: 252 MRRAAKVLDEC-----VGN--------------GVEPNERTYGVLIKGFCKIGQMEAAEM 292
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ DM+ G+ N + ++T+I G C G +DD LKI ME K G + I YN++ G
Sbjct: 293 LLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAME--KIGVELNIYTYNTLACG 350
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
L R + P V + I C DG++ +A+R F +M E+G P+V+
Sbjct: 351 LCRMG--------------VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVL 396
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y +IH Y ++ R+REA KEM G++P T+ +++ G C G V ALKL EE
Sbjct: 397 TYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEM 456
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ RG+ P Y+ LI L ++G ++A L M+ G++PD +++L+
Sbjct: 457 KQ---RGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 194/426 (45%), Gaps = 47/426 (11%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P S+ SP S+ V+ GL ++ ++D + D + R ++ + +NS+LD V++
Sbjct: 126 PGSV-SPFAASV---VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKD 181
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D + M G++ TY IL+ L + L + MK+ V + +Y
Sbjct: 182 DGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTA 241
Query: 122 LIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I++ C+ G + RA ++ + EPN+ T+ +LI +CK + A +LL G
Sbjct: 242 VINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQG 301
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ + +++ C G V DA+ K+K ME+ G N+
Sbjct: 302 VGLNQIIFNTMIDGYCRKGMVDDAL-------------KIKAA------MEKIGVELNIY 342
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN L C GV+ N+VTY TLI C G + + ++ + M
Sbjct: 343 TYNTLACGLCRMGVVP----------------NYVTYTTLISIHCKDGDMVEARRLFREM 386
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+++G+ + Y+ +++G ++ + EA + K+MEK P + + G CV+G
Sbjct: 387 --AEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNG 444
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A + F++M + G PNVV Y LI +E R A +L +M G +P S ++
Sbjct: 445 KVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYS 504
Query: 416 TVLSGL 421
++ L
Sbjct: 505 ALVGSL 510
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 40/333 (12%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ ++ L AR I+ V + + N+ + ++ ++++ + A + +
Sbjct: 204 YTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECV 263
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+GV+ ++ TY +L+KG C ++ LL M+ +GV N +I+NT+I C+ G V
Sbjct: 264 GNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVD 323
Query: 134 RARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A + + ME E N T++ L C C+ G VP+ VT T ++
Sbjct: 324 DALKIKAAMEKIGVELNIYTYNTLACGLCR----------------MGVVPNYVTYTTLI 367
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
+ C G +++A + E E+G + G+++ RF KEME+KG +
Sbjct: 368 SIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFV 427
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+V TY L+ +C G +D AL +F +MK G N V Y LI GL GR +
Sbjct: 428 PDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSE---AA 484
Query: 294 LQLMEDS-KEGSKGRISPYNSVLYGLYRENQQD 325
QL +D K G S Y++++ L+ +N++D
Sbjct: 485 FQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKD 517
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/541 (28%), Positives = 243/541 (44%), Gaps = 64/541 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + I I +I+ I V + +S SL N++L L K E ++ AR
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185
Query: 68 YRKKMMASGVQ-----------------------------------GDDYTYAILMKGLC 92
Y K+M+ SG+Q D +TY L+ G C
Sbjct: 186 Y-KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 244
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDV 148
+ F + M G PNSV Y+TLI+ LC G+V A ++ +M EP
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+++ I A C E+ A+ L+ + G P+V T T ++ L +G++ A+ + +
Sbjct: 305 TYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKM 364
Query: 209 GEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G + G+ + ME G L N TYN +I C G +
Sbjct: 365 LKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDI 424
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A+ +F M G VTY+TLI G + G +++ ++L LM+++ G + YN
Sbjct: 425 EKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN--GCEPDEWTYN 482
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ G + + + A Y ++M + L P V + I G DG V+ A +M E
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PNV Y+ +I+ +E R EA ++ +M G LP T+ T++ GLCR G A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
K+ DM R LP YS LI LC++G A +LL +M KG+ PD +T+ SL
Sbjct: 603 FKIF-HDME--KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659
Query: 491 L 491
+
Sbjct: 660 I 660
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 219/474 (46%), Gaps = 29/474 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + ++I G R R ++ D + + P+ ++++++ L E +D A
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ G++ YTY + + LC + +L+ MK RG +PN Y LI L
Sbjct: 291 L-EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ A L M + PN VT++ LI C AL + G + +
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T ++++ LC G + A+ + E+ + G L G V R L M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ GC P+ TYN L+S + + G L+SA F +M G++ N V+Y LI G G++
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D L +L+ ME+ G + YN+V+ GL +EN+ EA + +M + L P + +
Sbjct: 530 DIALSLLKRMEEM--GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C +G + A + F M + +PN+ Y LI+ CQE + EA L+KEM
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 647
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
G P TF +++ G G + A L+ R + G P YS L+K L
Sbjct: 648 GLAPDEVTFTSLIDGFVVLGRIDHAFLLLR---RMVDMGCKPNYRTYSVLLKGL 698
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 170/369 (46%), Gaps = 26/369 (7%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P+++ + +++ L + +++A Y K M+ G+ + TY L+ LC+ R K
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHK-MLKEGLVPNTVTYNALINELCVGGRFSTALK 394
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+ H M+ G N+ YN +I LC G + +A L M + P VT++ LI Y
Sbjct: 395 IFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYL 454
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
+ N+ NA LL+ G PD T +++ G++ A +E E G
Sbjct: 455 TKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPV 514
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ GKV LK ME GC PNV++YN +I+ + A + + M
Sbjct: 515 SYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 574
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G+ N +TY TLI GLC GR KI ME K + Y+S++YGL +E
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK--CLPNLYTYSSLIYGLCQEG 632
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DEA LK+ME+ L P V + I GF V G ++ A +M++ G PN Y
Sbjct: 633 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYS 692
Query: 381 CLIHAYCQE 389
L+ +E
Sbjct: 693 VLLKGLQKE 701
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 140/300 (46%), Gaps = 31/300 (10%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
DI+ A + +KM+ G TY L+ G V + +LL +MK G +P+ Y
Sbjct: 423 DIEKAMVLF-EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N L+ K GK+ A +M E PN V+++ LI + K+ + AL LL++
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
G P+V + V+ L R +A +I ++ EQG R G+ +
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ +ME++ CLPN+ TY+ LI C+ G D A + +M+ G++ + VT+ +LI
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 661
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
G GRID +L+ M D G K Y+ +L GL +E E EK+FP
Sbjct: 662 GFVVLGRIDHAFLLLRRMVDM--GCKPNYRTYSVLLKGLQKECLLLE--------EKIFP 711
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 243/501 (48%), Gaps = 30/501 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKM 72
+ T++ L R +++++ + + + P++ +N +++ K +++ A Y K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ-YVSKI 244
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ +G+ D +TY L+ G C + FK+ + M +G + N V Y LIH LC ++
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L M++ P T+++LI + C E AL L+++ G P++ T T +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEMERKGC 232
++ LCS + A E+L + E+G + V G C+ ++ ME +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PN TYN LI YC++ V A+ V N M + + VTY++LI G C G D +
Sbjct: 425 SPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+L LM D G Y S++ L + + +EA + +E+ + P V + I G
Sbjct: 484 LLSLMND--RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+C G V++A ++M+ + +PN + ++ LIH C + +++EA+ L ++M G P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
ST ++ L + G+ A ++ + G+ P + Y+ I+ C +G A
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQ---MLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
++ +M G+ PD T++SL+
Sbjct: 659 MMAKMRENGVSPDLFTYSSLI 679
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 216/479 (45%), Gaps = 35/479 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKI--FNSILDVLVKED-IDLARAFYR 69
+ I +G A + D+ + + RF + L I +N++L+ L + +D + Y
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M+ V + YTY ++ G C V + + + + G+ P+ Y +LI C+
Sbjct: 208 E-MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR 266
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ A + ++M N+V ++ LI C + A+ L K P V T
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ LC R +A+ ++ KEME G PN+ TY +LI S
Sbjct: 327 TVLIKSLCGSERKSEALNLV-------------------KEMEETGIKPNIHTYTVLIDS 367
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C + A ++ M G+ N +TY+ LI G C G I+D + +++LME K
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
R YN ++ G + N +A+ L +M K+ P V + I G C GN + A R
Sbjct: 428 TRT--YNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M + G VP+ Y +I + C+ +RV EA +L + G P + ++ G C+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G V A ++E + + + LP S ++ LI LC G + A++L +MV G+ P
Sbjct: 545 AGKVDEAHLMLE---KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 233/510 (45%), Gaps = 55/510 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARA 66
+E + +I GL AR I++ A DL + P+++ + ++ L +
Sbjct: 287 NEVAYTHLIHGLCVARRIDE---AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+M +G++ + +TY +L+ LC + +LL M +G+ PN + YN LI+
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G + A ++ ME PN T++ LI YCK N+ A+ +L K +PDV
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDV 462
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ C R G R L M +G +P+ TY +
Sbjct: 463 VTYNSLIDGQC-------------------RSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I S C++ ++ A D+F+ ++ G++ N V Y LI G C G++D+ +L+ M SK
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML-SKN 562
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
++ +N++++GL + + EA ++M K L P ++ I DG+ + A
Sbjct: 563 CLPNSLT-FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F QM+ G P+ Y I YC+E R+ +A ++M +M +G P T+++++ G
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE------KGG---------- 464
G A +++ MR G P + LIK L E KG
Sbjct: 682 YGDLGQTNFAFDVLKR-MRDT--GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 465 --FQSASMLLVQMVGKGILPDYLTWNSLLI 492
F + LL +MV + P+ ++ L++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 210/456 (46%), Gaps = 40/456 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I G + MI D V +L+ ++P+ + +N ++ K ++ A
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+ V D TY L+ G C + ++LL +M RG+ P+ Y ++I SLCK
Sbjct: 451 NK-MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +V A L +E+ PN V ++ LI YCK + A ++LEK S +P+ +T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------------RL---GKVKGGCRFLKEME 228
++ LC+ G++ +A + E+ + G RL G ++M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TY I +YC G L A D+ M+ +G+S + TY +LI+G G+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 289 DGLKILQLMEDSK----------------EGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+L+ M D+ E G+ L + + D +E L+
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQE 389
+M + P A ILG C GN+ A++ FD M G+ P+ ++++ L+ C+
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
++ EA++++ +M G+LP + ++ GL ++G
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 7/274 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++S G++D V+ +M D + N TY+ ++ G C G +++ + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSLKILGFCVDGN 356
++ G Y S++ G + D A + +M R V + I G CV
Sbjct: 246 EA--GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+++A F +M ++ P V Y LI + C ER EA L+KEM G P T+
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ LC Q A +L+ + + +G +P Y+ LI C++G + A ++ M
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLE---KGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 477 GKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
+ + P+ T+N L+ + + +LN+M+
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 130/347 (37%), Gaps = 76/347 (21%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +I GL + + + + + + P++ ++ L+K D D A+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK-DGDFDHAYS 623
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R ++M++SG + D +TY ++ C R+ D ++ M+ GV P+ Y++LI
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILI------------------CAYCKEENLVN 165
G+ A ++ M EP+ TF LI CA
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------- 212
+ LLEK P+ + K++ +C VG + A ++ +
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDT------------------------------ 238
+L K + + +M G LP +++
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 239 -----YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ I+I + G++++ ++FN M+ +G ++ TY LI G
Sbjct: 864 EDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/506 (28%), Positives = 235/506 (46%), Gaps = 31/506 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P E+ +I GL + I + + V + + P+L ++NS+++ L K
Sbjct: 328 PSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELL 387
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G+ +D TY IL+ G ++ F + M G+ YN++I+ CK
Sbjct: 388 FSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCK 447
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A L +M + P T++ LI YCK+ + A L + G P+ VT
Sbjct: 448 FGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVT 507
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEME 228
T ++ LC + ++ +A ++ +E E L ++G CR L EM
Sbjct: 508 FTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMI 567
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+KG P+ TY LI+ C TG + A + ND+ + + Y L++G C GRI
Sbjct: 568 KKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIK 627
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL-EYLKQM--EKLFPRAVDRS 345
+ L Q M G + + Y ++ G NQ D L E L++M + + P V +
Sbjct: 628 EALVARQEM--VGRGLQMDLVSYAVLISGAL--NQNDRILFELLREMHGKGMQPDNVIYT 683
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I GF GN++ A + MI EG VPN V Y L++ + V EA L K M
Sbjct: 684 ILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVG 743
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+P T+ L L ++GN+ AL+L + +GS + Y+ LI+ C+ G F
Sbjct: 744 EAIPNHITYGCFLDHLTKEGNMENALQL----HNAMLQGSFANTVTYNILIRGYCQIGKF 799
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
Q A+ LL M+G G++PD +T+++ +
Sbjct: 800 QEAAKLLDVMIGIGMVPDCITYSTFI 825
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 228/496 (45%), Gaps = 54/496 (10%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR---- 69
F +I+ + + + D V +L+ + + P ++ +++L+ L + R F +
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALAR-----IRKFRQVLEL 212
Query: 70 -KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ +GV+ D Y Y +++K LC ++++ + G + V YN I+ LCK
Sbjct: 213 FDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCK 272
Query: 129 NGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +V A RSL + + VT+ L+ C+ + + ++++ G+VP
Sbjct: 273 SKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAA 332
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ ++E L +G + A E+L + G + G +PN+ YN +I+
Sbjct: 333 VSGLIEGLIKMGSIEGAFELLNKVG-------------------KLGVVPNLFVYNSMIN 373
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
S C+TG L+ A +F+ M G++ N VTY LI G ++D M + G
Sbjct: 374 SLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIEC--GI 431
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK---------ILGFCVDG 355
+ YNS++ N Q + +K E LF VD+ LK I G+C DG
Sbjct: 432 SATVYSYNSMI------NCQCK-FGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V A + + +M +G PN V + LI CQ ++ EAS+L EM LP T+N
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ G CR+GN A +L++E I +G P + Y PLI LC G A + +
Sbjct: 545 VLIEGHCREGNTTRAFELLDE---MIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDL 601
Query: 476 VGKGILPDYLTWNSLL 491
K D L + +LL
Sbjct: 602 HHKHQRLDELCYTALL 617
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 222/511 (43%), Gaps = 62/511 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P++ + +I G GR ++ + + ++ ++ +NS+++ K + +A
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M+ G++ TY L+ G C V FKL H M +G+ PN+V + LI LC
Sbjct: 458 F-KEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ K+ A L +M E PN+VT+++LI +C+E N A LL++ G PD
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTY 576
Query: 184 TITKVLELLCSVGRVMDAVEILEE-SGEQGRLGKV------KGGCR-------------- 222
T ++ LCS GRV +A E + + + RL ++ +G C+
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEM 636
Query: 223 -----------------------------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
L+EM KG P+ Y ILI + ++G L
Sbjct: 637 VGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLK 696
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A + + M +G N VTY L+ GL G +++ + + M E I+ Y
Sbjct: 697 KAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVG-EAIPNHIT-YGC 754
Query: 314 VLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
L L +E + AL+ M + F V ++ I G+C G ++A + D MI G
Sbjct: 755 FLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGM 814
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
VP+ + Y I+ YC+ V A ++ + M G P FN ++ C G + AL+
Sbjct: 815 VPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQ 874
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
L + M RG P Y L+ L ++
Sbjct: 875 LRNDMML---RGLKPTQSTYHSLMVQLAQRA 902
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 225/529 (42%), Gaps = 76/529 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD I+ V++ L + N + + + S+ +N ++ L K
Sbjct: 223 PDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEV 282
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDG---------------------------- 100
++ + G++ D TY L+ GLC G
Sbjct: 283 KRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIK 342
Query: 101 -------FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
F+LL+ + GV PN +YN++I+SLCK GK+ A L S M E PNDVT
Sbjct: 343 MGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVT 402
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ILI + + L A K G V + ++ C G+ M E+L
Sbjct: 403 YTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK-MKMAELL---- 457
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
KEM KG P V TY LIS YC+ G++ A ++++M GI+
Sbjct: 458 --------------FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAP 503
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQD 325
N VT+ LI GLC ++ + K+ M + K I P YN ++ G RE
Sbjct: 504 NTVTFTALICGLCQINKMAEASKLFDEMVELK------ILPNEVTYNVLIEGHCREGNTT 557
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A E L +M K L P I G C G V +AK + + + + + Y L+
Sbjct: 558 RAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALL 617
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI-G 442
+C+E R++EA +EM G G ++ ++SG Q + +++ E +R + G
Sbjct: 618 QGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-----RILFELLREMHG 672
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P + Y+ LI + G + A M+G+G +P+ +T+ +L+
Sbjct: 673 KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALV 721
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 198/455 (43%), Gaps = 72/455 (15%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L++GL + F+LL+ + GV PN +YN++I+SLCK GK+ A L S M E
Sbjct: 336 LIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERG 395
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
PNDVT++ILI + + L A K G V + ++ C G+ M
Sbjct: 396 LNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGK-MKMA 454
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+L KEM KG P V TY LIS YC+ G++ A ++++M
Sbjct: 455 ELL------------------FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGL 318
GI+ N VT+ LI GLC ++ + K+ M + K I P YN ++ G
Sbjct: 497 TGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK------ILPNEVTYNVLIEGH 550
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
RE A E L +M K L P I G C G V +AK + + + +
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610
Query: 377 VIYDCLIHAYCQEERVREA----------------------------------SELMKEM 402
+ Y L+ +C+E R++EA EL++EM
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREM 670
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G G P + ++ G + GN+ A + IG G +P S Y+ L+ L +
Sbjct: 671 HGKGMQPDNVIYTILIDGFIKSGNLKKAFEFW---YIMIGEGYVPNSVTYTALVNGLFKA 727
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G A +L +M+ +P+++T+ L L+++
Sbjct: 728 GYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKE 762
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 239/538 (44%), Gaps = 62/538 (11%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE----- 59
+ PP+ F V+RGL I D ++ D +S P +++ IL+ +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 60 DIDLARAFYRK------------------------------KMMASGVQGDDYTYAILMK 89
+ + A + K K+ G + D +Y ++K
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
GLC+ R GD +L+ M PN V +NTLI LC+NG R +++ M E P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ ++ +I CKE +L A +L + S+G P+VV VL+ LCS R +A E+L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 206 EESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
E ++ + G V L++M GC+P+V TY +I+ +C+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G++D A+ + M G N V+Y +++GLCS GR D +++ M ++G
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM--IQQGCPPNPV 462
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+N+++ L ++ ++A+E LKQM P + S I G G E+A + M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ +G PN +IY + A +E RV + ++ + A +N V+S LC++
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A+ + G +P Y+ LIK L +G + A LL ++ +G L +L
Sbjct: 583 DRAIDFFA---YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 212/442 (47%), Gaps = 31/442 (7%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V + YT+ +++GLC R+ D ++L M +G P +Y+ ++ + C++G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ M + ++++ A C++ + A+ LL K FG D+V+ VL+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C R D E+++ EM R C PN+ T+N LI C G+
Sbjct: 227 CMAKRWGDVEELMD-------------------EMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ +V M G + + Y T+I G+C G ++ +IL M G K + YN
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY--GLKPNVVCYN 325
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEE 370
+VL GL + EA E L +M + D + IL FC +G V+ +QM+
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +P+V+ Y +I+ +C+E + EA L+K M+ G P ++ VL GLC G A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+ + I +G P ++ LI LC+KG + A LL QM+ G PD ++++++
Sbjct: 446 EELMSQ---MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 491 LICLSQQ-TTWLLLLLLNEMVS 511
+ L + T L LLN MV+
Sbjct: 503 IDGLGKAGKTEEALELLNVMVN 524
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 163/365 (44%), Gaps = 36/365 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P D+ F ++ + +++ V++ + + P + + ++++ KE +
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M + G + + +Y I++KGLC R D +L+ M +G PN V +NTLI+ LC
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +A L+ M P+ +++S +I K AL LL + G P+ +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ + C++ R +GR+ KV +K+ + + YN +I
Sbjct: 533 IYSSI---ACALSR-------------EGRVNKVIQMFDNIKDTTIRS---DAVLYNAVI 573
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
SS C+ D A+D F M +G N TY LI+GL S G + ++L S+
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL-----SELC 628
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK----ILGFCVDGNVED 359
S+G + + +G+ Q++ ++ E+ AVD + K ILGF N+
Sbjct: 629 SRGALRKHLMRHFGISNCTQENGK----QKCEENLTSAVDNNYKLPIEILGFLEIQNLRP 684
Query: 360 AKRCF 364
++ F
Sbjct: 685 GEKQF 689
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 52/347 (14%)
Query: 192 LCSVGRVMDAVEILEESGEQGRL----GKVKGGCR------------------------- 222
LCS GR +A L ++G+ + V G CR
Sbjct: 57 LCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP 116
Query: 223 ----------------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
L EM KGC P Y++++ + C +G +++ V M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + + ++ +C G +D+ + +L+ + + G + I YN+VL GL + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKL--AFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 327 ALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
E + +M ++ P V + I C +G E QM E G P++ +Y +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
C+E + A+E++ M +G P +NTVL GLC A +L+ E + +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ---KD 351
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ L+ C+ G LL QM+ G +PD +T+ +++
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 211/451 (46%), Gaps = 36/451 (7%)
Query: 49 FNSILDVLVKED-IDLA----RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
+N++L L ++ +D A R + +AS + + +Y LM+ LC R L
Sbjct: 59 YNTVLAALCRQGCLDAALFLLRVMSHEPRLAS--RPNAISYTTLMRALCADRRAAQAVGL 116
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L M+ GV+P+ V Y TLI LC V A L+++M EPN V +S L+ YCK
Sbjct: 117 LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCK 176
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ + E+ G PDVV T +++ LC R GKVK
Sbjct: 177 TGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC-------------------RHGKVKK 217
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
R + M +G PNV TYN+LI+S C+ G + ALD+ +M G+ + VTY+TLI
Sbjct: 218 AARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLIT 277
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
GL S +D+ + +L+ M + + + +NSV++GL + +AL+ M +
Sbjct: 278 GLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGC 337
Query: 340 RA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
R V +L I G V+ A D+M G P+ Y LI+ +C+ +V A
Sbjct: 338 RCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAES 397
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+ EM G P + +L +C QG +G A L E + R + YS +I
Sbjct: 398 YLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE----MDRNCKLDAAAYSTMIH 453
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+ G + A L M+ +G++PD +T++
Sbjct: 454 GAFKSGEKKIAEEFLKDMIDEGLIPDAVTYS 484
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 186/388 (47%), Gaps = 32/388 (8%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNAL 167
++V YNT++ +LC+ G + A L+ M PN ++++ L+ A C + A+
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------------- 212
LL G PDVVT ++ LC V AVE+L E E G
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 213 -RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ G+ + + +EM +G P+V Y LI S C G + A V + M G+ N
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VTY+ LI +C G + + L + + M S++G + + YN+++ GL + DEA+ L
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNM--SEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292
Query: 332 KQM----EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M ++ P + + I G C G + A + M E G N+V ++ LI
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLL 352
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ +V++A ELM EM G P + T++ +++G C+ V A + E MR +G P
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSE-MR--HQGMEP 409
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQM 475
HY PL+KA+C++G A L +M
Sbjct: 410 EPVHYIPLLKAMCDQGMMGQARDLFNEM 437
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 202/450 (44%), Gaps = 58/450 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+IRGL A ++ V+ + + + P++ +++ +L K +
Sbjct: 127 PDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKV 186
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G++ D Y L+ LC +V +++ +M RG++PN V YN LI+S+CK
Sbjct: 187 FEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCK 246
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS--FGFVPDV 182
G V A L +M E P+ VT++ LI + A+ LLE+ PD+
Sbjct: 247 EGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDL 306
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
+T V+ LC +G + A+++ E G R+ KVK + E
Sbjct: 307 MTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDE 366
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G P+ TY+ILI+ +C+ ++ A ++M+ G+ V Y L++ +C G
Sbjct: 367 MASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGM 426
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ + M+ K + Y+++++G ++ ++ A E+LK M
Sbjct: 427 MGQARDLFNEMD---RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDM------------ 471
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I+EG +P+ V Y I+ + + + A ++K+MT G
Sbjct: 472 ---------------------IDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASG 510
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++P + F++++ G +G+ L+L E
Sbjct: 511 FVPDVAVFDSLIQGYGAKGDTEKILELTRE 540
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 186/431 (43%), Gaps = 50/431 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ ++ G + V K + +S + P + ++ +++D L + A
Sbjct: 162 PNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARV 221
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G++ + TY +L+ +C V + L M +GV+P+ V YNTLI L
Sbjct: 222 MDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS 281
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
++ A +L+ +M + E V PD++T V
Sbjct: 282 VLEMDEAMALLEEM---------------MQGETRVR--------------PDLMTFNSV 312
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ LC +G + A+++ E G R+ KVK + EM G
Sbjct: 313 IHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGL 372
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ TY+ILI+ +C+ ++ A ++M+ G+ V Y L++ +C G +
Sbjct: 373 QPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARD 432
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ M+ K + Y+++++G ++ ++ A E+LK M E L P AV S+ I
Sbjct: 433 LFNEMD---RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINM 489
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F G++ A+R QM G VP+V ++D LI Y + + EL +EMT
Sbjct: 490 FAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALD 549
Query: 411 ASTFNTVLSGL 421
+T+++ L
Sbjct: 550 PKIISTIVTSL 560
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 8/306 (2%)
Query: 191 LLCSVGRVMDAVE---ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
LL ++ V DAV +L QG L R + R PN +Y L+ + C
Sbjct: 46 LLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALC 105
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
A+ + M+ G+ + VTY TLIRGLC +D +++L M +S G +
Sbjct: 106 ADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCES--GIEPN 163
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ Y+ +L+G + + + + ++M + P V + I C G V+ A R D
Sbjct: 164 VVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMD 223
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M E G PNVV Y+ LI++ C+E VREA +L K M+ G P T+NT+++GL
Sbjct: 224 MMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVL 283
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ A+ L+EE M+G R P ++ +I LC+ G + A + M G + +
Sbjct: 284 EMDEAMALLEEMMQGETRVR-PDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLV 342
Query: 486 TWNSLL 491
+N L+
Sbjct: 343 AFNLLI 348
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 140/280 (50%), Gaps = 18/280 (6%)
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLM-EDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ V+Y+T++ LC G +D L +L++M + + S+ Y +++ L + + +A+
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L+ M+ + P V I G C +V+ A ++M E G PNVV+Y CL+H Y
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ R ++ +EM+G G P + ++ LCR G V A +++ DM RG
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVM--DMM-TERGLE 231
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
P Y+ LI ++C++G + A L M KG+ PD +T+N+L+ LS +
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSS---------V 282
Query: 507 NEMVSFVMVVHELSAKEKRCK--LRSLNHLAHGAGSV-WL 543
EM + ++ E+ E R + L + N + HG + W+
Sbjct: 283 LEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWM 322
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 219/438 (50%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M +G Q + T+ L+ GL L N+ + L+ M ++G +P+ V Y +++ LCK G
Sbjct: 790 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 849
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A +L++ ME EP + ++ +I CK +++ +AL L ++ + G P+VVT +
Sbjct: 850 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 910 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 969
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M + VTY+TLI+G C R+++G
Sbjct: 970 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 1029
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G YN ++ GL++ D A E K+M + + P + + +
Sbjct: 1030 MEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 1087
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A F+ + P + Y+ +I C+ +V + +L ++ G
Sbjct: 1088 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 1147
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +NT++SG CR+G+ A L +E G+LP SG Y+ LI+A G +++
Sbjct: 1148 PDVVAYNTMISGFCRKGSKEEADALFKEMKED---GTLPNSGCYNTLIRARLRDGDREAS 1204
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G D T
Sbjct: 1205 AELIKEMRSCGFAGDAST 1222
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 211/442 (47%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F T+I GL ++ + D + P L + +++ L K D DLA
Sbjct: 798 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 857
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM ++ Y ++ GLC + D L M+++G++PN V Y++LI LC
Sbjct: 858 L-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E P+ TFS LI A+ KE LV A L ++ P +V
Sbjct: 917 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 976
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A ++ E M K C P+V TYN LI
Sbjct: 977 TYSSLINGFCMHDRLDEAKQMFEF-------------------MVSKHCFPDVVTYNTLI 1017
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ ++ ++VF +M G+ N VTY+ LI+GL G D +I + M +G
Sbjct: 1018 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM--VSDG 1075
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ I G C G VED
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDG 1134
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G P+VV Y+ +I +C++ EA L KEM G LP + +NT++
Sbjct: 1135 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 1194
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 1195 RLRDGDREASAELIKE-MRSCG 1215
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 222/458 (48%), Gaps = 38/458 (8%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ F+ +L + K + ++M G+ + YTY+IL+ C +++ +
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 752
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L M G +PN V ++L++ C + ++ A +L+ M +PN VTF+ LI
Sbjct: 753 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
A+ L+++ + G PD+VT V+ LC G A +L + EQG+L
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLE---- 867
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
P V YN +I C+ +D AL++F +M+ GI N VTY +LI
Sbjct: 868 --------------PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQME 335
LC+ GR D ++L M + K I+P +++++ +E + EA + +M
Sbjct: 914 CLCNYGRWSDASRLLSDMIERK------INPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 336 K--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
K + P V S I GFC+ +++AK+ F+ M+ + P+VV Y+ LI +C+ +RV
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
E E+ +EM+ G + T+N ++ GL + G+ A ++ +E + G P Y+
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE---MVSDGVPPNIMTYN 1084
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ LC+ G + A ++ + + P T+N ++
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 1122
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 27/361 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM+ G + D T L+ G C NRV D L+ M G KP+ V YN +I SLCK
Sbjct: 248 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 307
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A ++E PN VT++ L+ C +A LL P+V+T +
Sbjct: 308 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 367
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+L+ G+V++A E+ E EM R P++ TY+ LI+
Sbjct: 368 ALLDAFVKNGKVLEAKELFE-------------------EMVRMSIDPDIVTYSSLINGL 408
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C +D A +F+ M G + V+Y+TLI G C R++DG+K+ + M S+ G
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVS 466
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
YN+++ G ++ D+A E+ QM+ + P ++ + G C +G +E A F
Sbjct: 467 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 526
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M + ++V Y +I C+ +V EA L ++ G P T+ T++SGLC +
Sbjct: 527 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 586
Query: 425 G 425
G
Sbjct: 587 G 587
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 236/527 (44%), Gaps = 63/527 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD +++ G R ++D V D + P + +N+I+D L K + ++ A F
Sbjct: 256 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 315
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++ G++ + TY L+ GLC ++R D +LL M + + PN + Y+ L+ +
Sbjct: 316 F-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 374
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNGKV A+ L +M +P+ VT+S LI C + + A + + S G + DVV
Sbjct: 375 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 434
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ C RV D G + +EM ++G + N TYN LI
Sbjct: 435 SYNTLINGFCKAKRVED-------------------GMKLFREMSQRGLVSNTVTYNTLI 475
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + G +D A + F+ M GIS + TY+ L+ GLC G ++ L I + M+ K
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ--KRE 533
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
I Y +V+ G+ + + +EA ++ L P V + + G C G + + +
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +M +EG + N DC + + + ++EL+K+M GY P S + SG+
Sbjct: 594 ALYTKMKQEGLMKN----DCTL----SDGDITLSAELIKKMLSCGYAP--SLLKDIKSGV 643
Query: 422 CRQG-------NVGTALKLVEEDMRG-----------------IGRGSLPGSGHYSPLIK 457
C++ + T+ E+ R + P +S L+
Sbjct: 644 CKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLS 703
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLL 504
A+ + F L QM GI ++ T++ L+ C +++ L L
Sbjct: 704 AIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 750
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 40/407 (9%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFS 151
++ D L M P+ V +N L+ ++ K K SL ME ND+ TF+
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
I+I +C + AL +L K G+ PD VTI ++ C RV DAV ++++
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK---- 283
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
M G P++ YN +I S C+T ++ A D F +++ GI N
Sbjct: 284 ---------------MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 328
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA 327
VTY L+ GLC+ R D ++L M K +I+P Y+++L + + EA
Sbjct: 329 VTYTALVNGLCNSSRWSDAARLLSDM------IKKKITPNVITYSALLDAFVKNGKVLEA 382
Query: 328 LEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E ++M ++ P V S I G C+ +++A + FD M+ +G + +VV Y+ LI+
Sbjct: 383 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 442
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRG 444
+C+ +RV + +L +EM+ G + T+NT++ G + G+V A + + D GI
Sbjct: 443 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS-- 500
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ LC+ G + A ++ M + + D +T+ +++
Sbjct: 501 --PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 133/540 (24%), Positives = 226/540 (41%), Gaps = 87/540 (16%)
Query: 39 RFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV 97
R ++ P + ++S+++ L D ID A + M++ G D +Y L+ G C RV
Sbjct: 391 RMSIDPDIVTYSSLINGLCLHDRIDEANQMF-DLMVSKGCLADVVSYNTLINGFCKAKRV 449
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSIL 153
DG KL M RG+ N+V YNTLI + G V +A+ S M+ P+ T++IL
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509
Query: 154 ICAYCKEENLVNALVL----------------------------LEKSFSF-------GF 178
+ C L ALV+ +E+++S G
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 569
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--------GKVKGGCRFLKEMERK 230
PD+VT T ++ LC+ G + + + + ++G + G + +K+M
Sbjct: 570 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSC 629
Query: 231 GCLPNVDTYNILISSYCETGV---------------------------LDSALDVFNDMK 263
G P++ + S C+ + LD A+ +F +M
Sbjct: 630 GYAPSL--LKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMV 687
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ + + L+ + + D + + + M++ G Y+ ++ R +Q
Sbjct: 688 KSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL--GIPHNHYTYSILINCFCRRSQ 745
Query: 324 QDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
AL L +M KL P V S + G+C + +A DQM G PN V ++
Sbjct: 746 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 805
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LIH + EA L+ M G P T+ V++GLC++G+ A L+ + +
Sbjct: 806 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK----M 861
Query: 442 GRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+G L PG Y+ +I LC+ A L +M KGI P+ +T++SL+ CL W
Sbjct: 862 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 921
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 23/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F +I + + + K D + + ++ PS+ ++S+++ D +D A+
Sbjct: 938 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 997
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ D TY L+KG C RV +G ++ M RG+ N+V YN LI L
Sbjct: 998 F-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 1056
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD PN +T++ L+ CK L A+V+ E P +
Sbjct: 1057 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 1116
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D ++ +G V G CR KEM
Sbjct: 1117 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 1176
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LPN YN LI + G +++ ++ +M+ G + + T L+ + GR+
Sbjct: 1177 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 1235
Query: 288 D 288
D
Sbjct: 1236 D 1236
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + T++ GL + + + + + R M P++
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-------------------- 1116
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
TY I+++G+C +V DG+ L + +GVKP+ V YNT+I C
Sbjct: 1117 ---------------TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 1161
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A +L +M+E PN ++ LI A ++ + + L+++ S GF D
Sbjct: 1162 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 1221
Query: 184 TITKVLELL 192
TI V +L
Sbjct: 1222 TIGLVTNML 1230
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D + DA F M++ P++V ++ L+ A + ++ L K+M G T
Sbjct: 166 DIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 225
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
FN V++ C V AL ++ + ++ G P L+ C + A L+
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLK---LGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282
Query: 474 QMVGKGILPDYLTWNSLL 491
+MV G PD + +N+++
Sbjct: 283 KMVEIGYKPDIVAYNAII 300
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 209/434 (48%), Gaps = 27/434 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P S F +I GL I + V+ + + R P++ +N+I++ L K
Sbjct: 156 PTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDV 215
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM +G + D TY ++ LC V D + L M RG+ PN YN ++H C
Sbjct: 216 FKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L +M P+ VT +IL+ CKE + A ++ E G P++ T
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C + R+M+ + + + M R+GC P V +YNILI+
Sbjct: 336 YNALMDGYC-LQRLMNEAK------------------KVFEIMIRQGCAPGVHSYNILIN 376
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C++ +D A + +M ++ + VTY TL++GLC GR + L I + M G
Sbjct: 377 GFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM--CSYGL 434
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ +L G + DEAL+ LK M+ KL P V ++ I G + G +E AK
Sbjct: 435 LPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKE 494
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ +G P + Y +I +E EA +L ++M G+LP + ++N ++ G
Sbjct: 495 LFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFL 554
Query: 423 RQGNVGTALKLVEE 436
+ + TA++L++E
Sbjct: 555 QNQDSSTAIRLIDE 568
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 131/472 (27%), Positives = 219/472 (46%), Gaps = 32/472 (6%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
I+D + + + R N PS+ F L K+ +M GV + Y+ +
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---- 142
L+ LC N V +L M G+ P + +N LI+ LC GK+ A L ++M
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
EPN ++++ +I CK N A+ + +K G PDVVT +++ LC V DA+
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E FL EM +G PNV TYN ++ +C G L+ A +F +M
Sbjct: 249 E-------------------FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM 289
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + VT L+ GLC G + + + + M +++G + IS YN+++ G +
Sbjct: 290 VGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM--TEKGVEPNISTYNALMDGYCLQR 347
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+EA + + M + P ++ I GFC +++AK +M + P+ V Y
Sbjct: 348 LMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYS 407
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ CQ R +EA + KEM +G LP T++ +L G C+ G++ ALKL ++
Sbjct: 408 TLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL----LKS 463
Query: 441 IGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ L P H++ LI+ + G + A L ++ GI P T+ ++
Sbjct: 464 MQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 26/354 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ F + ++ K++ + L + FG +V ++ ++ LC + V AV I
Sbjct: 86 PSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI 145
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L G++ K+ G P T+N LI+ C G + A+++FN+M
Sbjct: 146 L------GKMFKL-------------GIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G N ++Y+T+I GLC G + + + ME + G K + YN+++ L ++
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKME--QNGCKPDVVTYNTIIDSLCKDRLV 244
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
++A+E+L +M + P + + GFC+ G + +A R F +M+ +P+ V L
Sbjct: 245 NDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ C+E V EA + + MT G P ST+N ++ G C Q + A K+ E +R
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR--- 361
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+G PG Y+ LI C+ A LL +M K + PD +T+++L+ L Q
Sbjct: 362 QGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 202/445 (45%), Gaps = 40/445 (8%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
P+ + T+I GL G M DV K + + P + +N+I+D L K+ +
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKME---QNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M+ G+ + +TY ++ G C+ ++ + +L M R V P++V L+
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK G V AR + M EPN T++ L+ YC + + A + E G P
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
V + ++ C R MD + L L EM K P+ TY+
Sbjct: 368 VHSYNILINGFCK-SRRMDEAKSL------------------LAEMYHKALNPDTVTYST 408
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ C+ G AL++F +M G+ N VTY L+ G C G +D+ LK+L+ M++ K
Sbjct: 409 LMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKK 468
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+ I + ++ G++ + + A E ++ + + P ++ I G +G ++
Sbjct: 469 --LEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDE 526
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F +M ++G +PN Y+ +I + Q + A L+ EM G + STF +L
Sbjct: 527 AYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL- 585
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRG 444
++ + +++ + MRG +G
Sbjct: 586 ------DLESQDEIISQFMRGSSQG 604
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 153/332 (46%), Gaps = 27/332 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PP+ + ++ G +N+ + ++V R ++ P ++D L KE +
Sbjct: 260 PPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR-DVMPDTVTLTILVDGLCKEGMVSEAR 318
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M GV+ + TY LM G CL + + K+ +M +G P YN LI+
Sbjct: 319 LVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGF 378
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ ++ A+SL+++M P+ VT+S L+ C+ AL + ++ S+G +P++
Sbjct: 379 CKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNL 438
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT + +L+ C G + +A+++ LK M+ K PN+ + IL
Sbjct: 439 VTYSILLDGFCKHGHLDEALKL-------------------LKSMQEKKLEPNIVHHTIL 479
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I G L+ A ++F+ + DGI TY +I+GL G D+ + + MED +
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMED--D 537
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G YN ++ G + A+ + +M
Sbjct: 538 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEM 569
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+++DA F +M+ P+V + + ++ ++++ L +M G + N
Sbjct: 68 SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ LCR +V A+ ++ + + G P + ++ LI LC +G + A L +M
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFK---LGIHPTASTFNALINGLCNEGKIKEAVELFNEM 184
Query: 476 VGKGILPDYLTWNSLL--ICLSQQTTW 500
V +G P+ +++N+++ +C + T+
Sbjct: 185 VRRGHEPNVISYNTIINGLCKTGNTSM 211
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 227/500 (45%), Gaps = 67/500 (13%)
Query: 40 FNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
+++ P +++++D +E + +M+ G+Q + T+ L+KGLC D
Sbjct: 388 WDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFED 447
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
+ H+M RGV P+ V Y TL+ L K G+ RA +L +D+ + F+ +I
Sbjct: 448 ALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMIN 507
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
+CK E ++ A + GF PD VT +++ C +G V +A ++ E
Sbjct: 508 GFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKE--------- 558
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
+ME++ LP+++ YN LI ++ +D+ ++M + G+S N VTY
Sbjct: 559 ----------KMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYG 608
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
TLI G C GR+D + ++G + + ++ LYR + DEA L++M
Sbjct: 609 TLIAGWCDEGRLDKAFT--AYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 666
Query: 336 KL-------------------------------------FPRAVDRSLKILGFCVDGNVE 358
L P +V ++ I G C G V+
Sbjct: 667 NLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVD 726
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DAK+ F ++ G P+ Y LIH Y V +A L EM G P T+N ++
Sbjct: 727 DAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALI 786
Query: 419 SGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+GLC+ GN+ A KL ++ ++G+ P Y+ LI C+ G + A L +M+
Sbjct: 787 NGLCKSGNLDRAQKLFDKLHLKGLA----PNVISYNILIDGYCKNGNTREALDLRNKMLK 842
Query: 478 KGILPDYLTWNSLLICLSQQ 497
+GI P +T+++L+ +Q
Sbjct: 843 EGISPSLITYSALIYGFCKQ 862
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 221/485 (45%), Gaps = 62/485 (12%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A R+ + G+ D+Y Y +L+ G C ++ D +L M + G++ N I N LI
Sbjct: 307 AEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALI 366
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ CKNG+V A L+ M EP ++S L+ +C+E + A+ + + G
Sbjct: 367 NGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQ 426
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
+VVT +L+ LC VG DA+ + ++G ++G+
Sbjct: 427 SNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALAL 486
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++ +G + +N +I+ +C+ + A + FN MK G + VTY TLI G C
Sbjct: 487 WNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCK 546
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G +++ K+ + ME KE I YNS++ GL++ + E ++ L +M + L P
Sbjct: 547 LGNVEEAFKVKEKME--KEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNV 604
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V I G+C +G ++ A + MIE+G PNV+I ++ + + R+ EA+ L+++
Sbjct: 605 VTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 664
Query: 402 MTG------HGY-----------------------------LPIASTFNTVLSGLCRQGN 426
M HGY LP + +N ++GLC+ G
Sbjct: 665 MVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGK 724
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
V A K+ + RG P + Y LI G A L +M+ +G+ P+ +T
Sbjct: 725 VDDAKKIFSSLLL---RGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIIT 781
Query: 487 WNSLL 491
+N+L+
Sbjct: 782 YNALI 786
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 203/451 (45%), Gaps = 61/451 (13%)
Query: 9 PDESIFITVIRGLGR-ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLAR 65
PDE + T++ L + + D+++R S FN++++ K + I+
Sbjct: 462 PDEVSYCTLLDLLFKMGEFFRALALWNDILAR-GYGRSTYAFNTMINGFCKMEKMIEAEE 520
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F R K + G + D TY L+ G C V + FK+ M+ + P+ +YN+LI
Sbjct: 521 TFNRMKEL--GFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGG 578
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L K+ K L+S+M PN VT+ LI +C E L A GF P+
Sbjct: 579 LFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPN 638
Query: 182 VVTITKVLELLCSVGRVMDA---------VEILEESGEQGRLGKVKGG-------CRFLK 225
V+ +K++ L +GR+ +A +++ + G RL K G L
Sbjct: 639 VIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLD 698
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
E + LPN YNI I+ C++G +D A +F+ + + G S + TY TLI G + G
Sbjct: 699 ESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAG 758
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
++D + M K G I YN+++ GL
Sbjct: 759 NVNDAFSLRDEM--LKRGLAPNIITYNALINGL--------------------------- 789
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
C GN++ A++ FD++ +G PNV+ Y+ LI YC+ REA +L +M
Sbjct: 790 ------CKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKE 843
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
G P T++ ++ G C+QG++G A L++E
Sbjct: 844 GISPSLITYSALIYGFCKQGDMGKATNLLDE 874
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 203/414 (49%), Gaps = 46/414 (11%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKE 160
FKL K +PN + L+H L + RS ++++ P+ +S L+
Sbjct: 81 FKL--ASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLV------ 132
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
+ N LV + + F F P V + +L++ C G + +A+ + + G+ G + ++
Sbjct: 133 --VWNELVRVFEDFKFS--PTVFDM--ILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSC 186
Query: 221 CRFLKEMERKG----------------CLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
R L + RKG +P+V T +I++++YC+ G ++ A+D +M
Sbjct: 187 NRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDY 246
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLYRE 321
G N VTY++LI G S G ++ +L+LM G +G + ++ G R+
Sbjct: 247 LGFELNVVTYNSLIDGCVSIGDMERAEMVLKLM-----GERGILRNKVTLTLLIKGYCRQ 301
Query: 322 NQQDEALEYLKQMEKLFPRAVDR---SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ +EA + L++ME+ +D + I G+C ++DA R D+M+ G N+ I
Sbjct: 302 CKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFI 361
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
+ LI+ YC+ +V EA L+ M P + +++T++ G CR+G V A+ + E +
Sbjct: 362 CNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEML 421
Query: 439 R-GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R GI + ++ L+K LC G F+ A + M+ +G+ PD +++ +LL
Sbjct: 422 RVGIQSNVVT----HNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLL 471
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 217/503 (43%), Gaps = 62/503 (12%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL 87
++ + D ++R + P + + +++ K+ + K+M G + + TY L
Sbjct: 200 SNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSL 259
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP-- 145
+ G + +L +M RG+ N V LI C+ K+ A ++ +ME
Sbjct: 260 IDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEG 319
Query: 146 ---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
++ + +LI YC+ + +A+ L ++ + G ++ ++ C G+V +A
Sbjct: 320 MVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAE 379
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R L M P +Y+ L+ +C G++ A+ V+N+M
Sbjct: 380 -------------------RLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM------------------------- 297
GI N VT+++L++GLC G +D L + LM
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480
Query: 298 -------EDSKEGSKGRIS-PYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLK 347
D GR + +N+++ G + + EA E +M++L P V
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G+C GNVE+A + ++M +E +P++ +Y+ LI + ++ RE +L+ EM G
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+ T+++G C +G + A DM I +G P S ++ +L G
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFT-AYFDM--IEKGFAPNVIICSKIVSSLYRLGRIDE 657
Query: 468 ASMLLVQMVGKGILPDYLTWNSL 490
A+MLL +MV + D+ ++ L
Sbjct: 658 ANMLLQKMVNLDVFLDHGYFDRL 680
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 137/346 (39%), Gaps = 55/346 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I G + + + K + + + + PS++++NS++ L K
Sbjct: 532 PDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDL 591
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G+ + TY L+ G C R+ F M +G PN +I + ++ SL +
Sbjct: 592 LSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYR 651
Query: 129 NGKVGRARSLMSDMEE---------------------------------------PNDVT 149
G++ A L+ M PN V
Sbjct: 652 LGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVV 711
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++I I CK + +A + GF PD T ++ + G V DA + +E
Sbjct: 712 YNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEML 771
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
++G + G + + ++ KG PNV +YNILI YC+ G
Sbjct: 772 KRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTR 831
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
ALD+ N M +GIS + +TY LI G C G + +L M +
Sbjct: 832 EALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRE 877
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 35/170 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G A +ND D + + + P++ +N++++ L K ++D A+
Sbjct: 742 PDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKL 801
Query: 68 Y----------------------------------RKKMMASGVQGDDYTYAILMKGLCL 93
+ R KM+ G+ TY+ L+ G C
Sbjct: 802 FDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCK 861
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+G LL M+ N + L+ K G+V + L + M
Sbjct: 862 QGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMH 911
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 235/503 (46%), Gaps = 29/503 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
+E + +I+GL A+ + + + ++ R +P+++ F ++ L K + AR +
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M +GV TY ++ G R+ D K+ +M+ G P+ YNTLI+ LC
Sbjct: 312 -DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC- 369
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K A L+++ + P VTF+ LI YC E +AL + K S D+
Sbjct: 370 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
K++ L R+ +A E+L E G + GKV LK ME
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R GC PN TYN L+ + L A+ + M+ DGI N +TY TL++G C D
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ ++ ++ME + G K Y + L + + +EA ++ + + +L I
Sbjct: 550 NAFRLFEMME--QNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL-I 606
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF GN + A ++MI+EG P+ Y L+HA C+++R+ EA ++ +M+ G
Sbjct: 607 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 666
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ ++ + R+G A ++ E G P + Y+ I + C++G + A
Sbjct: 667 CTIFAYTILIDEMLREGKHDHAKRMYNE---MTSSGHKPSATTYTVFINSYCKEGRLEDA 723
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L+++M +G+ PD +T+N L+
Sbjct: 724 EDLILKMEREGVAPDVVTYNILI 746
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 206/427 (48%), Gaps = 31/427 (7%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Q ++Y+Y IL++GLC V + L +MK G PN + LI LCK+G+VG A
Sbjct: 248 GCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R L M + P+ +T++ +I Y K + +AL + E G PD T ++
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 367
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMERKGCLPN 235
LC + +A E+L + ++G V G C R +M C +
Sbjct: 368 LCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ + LI+S + L A ++ N++ +G+ N +TY ++I G C G++D L++L+
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
+ME ++G + YNS++YGL ++ + +A+ L +M+K + P + + + G C
Sbjct: 487 MME--RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+ + ++A R F+ M + G P+ Y L A C+ R EA + G
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 601
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ T++ G + GN A L+E R I G P S YS L+ ALC++ A +L
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIE---RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658
Query: 474 QMVGKGI 480
QM +GI
Sbjct: 659 QMSLRGI 665
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 204/452 (45%), Gaps = 35/452 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + ++I G ++ ++ ++ ++ R P+ +NS++ LVK D L +A
Sbjct: 460 PNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK-DKKLHKAMA 518
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G+ + TY L++G C + + F+L +M+ G+KP+ Y L +LC
Sbjct: 519 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Query: 128 KNGKVGRARSLMSDMEEP-NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K G+ A S + V ++ LI + K N A L+E+ G PD T +
Sbjct: 579 KAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+L LC R+ +A+ IL++ +G R GK R EM
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TY + I+SYC+ G L+ A D+ M+ +G++ + VTY+ LI G G ID
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758
Query: 291 LKILQLMEDS-------------KEGSKGRISPYNSV-LYGLYRENQQDEALEYLKQMEK 336
L+ M + K KG ++ SV G++ + D + L++M K
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P S I GFC G +E+A D M +G PN IY LI C + +
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
A + M+ G+ P ++ ++ GLC +G+
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/574 (24%), Positives = 242/574 (42%), Gaps = 105/574 (18%)
Query: 9 PDESIFITVIRGLGRAR------MINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDI 61
PD+ + T+I GL + ++N+ VK TP++ F ++++ + E
Sbjct: 356 PDDWTYNTLIYGLCDQKTEEAEELLNNAVKE-------GFTPTVVTFTNLINGYCMAEKF 408
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A + KMM+S + D + L+ L +R+ + +LL+ + + G+ PN + Y +
Sbjct: 409 DDALRM-KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 467
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I CK+GKV A ++ ME +PN T++ L+ K++ L A+ LL K G
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+P+V+T T +L+ C +A R + ME+ G P+
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAF-------------------RLFEMMEQNGLKPDEH 568
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
Y +L + C+ G A + ++ + G++ V Y TLI G G D +++ M
Sbjct: 569 AYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD--- 354
D EG Y+ +L+ L ++ + +EAL L QM R + ++ +D
Sbjct: 626 ID--EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL---RGIKCTIFAYTILIDEML 680
Query: 355 --GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G + AKR +++M G P+ Y I++YC+E R+ +A +L+ +M G P
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740
Query: 413 TFNTVLSGLCRQGNVGTAL----------------------------------------- 431
T+N ++ G G + A
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGM 800
Query: 432 -KLVEEDM------RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
L+E D+ R + G P YS LI C+ G + A +LL M GKG+ P+
Sbjct: 801 WNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNE 860
Query: 485 LTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHE 518
+ L+ C + +SFV ++ E
Sbjct: 861 DIYTLLIKCCCDTK------FFEKALSFVSIMSE 888
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 230/525 (43%), Gaps = 42/525 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G A +D ++ + + L++F +++ L+K+D
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ A+G+ + TY ++ G C + +V ++L +M+ G +PN+ YN+L++ L K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ +A +L++ M++ PN +T++ L+ C E + NA L E G PD
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKGGCRFLKEMERKG 231
+ + LC GR +A + G + G ++ M +G
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C P+ TY++L+ + C+ L+ AL + + M + GI Y LI + G+ D
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++ M S G K + Y + +E + ++A + + +ME+ + P V ++ I
Sbjct: 690 RMYNEMTSS--GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---ERVREAS---------- 396
G G ++ A +M+ PN Y CL+ + + VR
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLLLKHLLKGNLAYVRSVDTSGMWNLIEL 806
Query: 397 ----ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+L++ M HG P +T++++++G C+ G + A L++ G+G P Y
Sbjct: 807 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH---MCGKGLSPNEDIY 863
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ LIK C+ F+ A + M G P ++ L++ L +
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNE 908
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 197/398 (49%), Gaps = 34/398 (8%)
Query: 119 YNTLIHSLCK---NGKVGRARS-LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSF 174
YN + SL + +GR S L+ D P+ VT++ +I +YCKE +L A
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLL 210
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILE-------ESGEQGRLGKVKGGC--RFLK 225
G P+ T ++ C G + A + + E ++G C + ++
Sbjct: 211 EGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVR 270
Query: 226 E-------MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
E M+R GC PNV + LIS C++G + A +F+ M +G+ + +TY+ +I
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G GR++D LKI +LME K G YN+++YGL + + +EA E L E
Sbjct: 331 VGYSKLGRMNDALKIKELME--KNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEG 387
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V + I G+C+ +DA R ++M+ ++ ++ LI++ +++R++EA
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAK 447
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYS 453
EL+ E++ +G +P T+ +++ G C+ G V A LK++E D G P + Y+
Sbjct: 448 ELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD------GCQPNAWTYN 501
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ L + A LL +M GI+P+ +T+ +LL
Sbjct: 502 SLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 539
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 7/193 (3%)
Query: 308 ISP--YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+SP YN L L R + + Q+ + L P V + I +C +G++ A RC
Sbjct: 146 LSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRC 205
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F ++E G P + L+ YC+ +R+A L M G ++ ++ GLC
Sbjct: 206 FRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCE 265
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
V AL L R G P ++ LI LC+ G A +L M G++P
Sbjct: 266 AKCVREALVLFLMMKRD---GCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPS 322
Query: 484 YLTWNSLLICLSQ 496
+T+N++++ S+
Sbjct: 323 VMTYNAMIVGYSK 335
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 211/442 (47%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F T+I GL ++ V D + P L + +++ L K D DLA
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFIL 243
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM ++ Y ++ GLC + D L M+++G++PN V Y++LI LC
Sbjct: 244 L-NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E P+ TFS LI A+ KE LV A L ++ P +V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A ++ E M K C P+V +Y+ LI
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEF-------------------MVSKHCFPDVVSYSTLI 403
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ +D +++F +M G+ N VTY TLI+GL G D +I + M +G
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEM--VSDG 461
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ I G C G VED
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G P+VV Y+ +I +C++ EA L KEM G LP + +NT++
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 581 RLRDGDREASAELIKE-MRSCG 601
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/438 (27%), Positives = 217/438 (49%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M +G Q + T+ L+ GL L N+ + L+ M ++G +P+ V Y +++ LCK G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A L++ ME EP + ++ +I CK +++ +AL L ++ + G P+VVT +
Sbjct: 236 DTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M + V+Y TLI+G C R+D+G
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEG 415
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G Y +++ GL++ D A E K+M + + P + + +
Sbjct: 416 MELFREM--SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A F+ + P + Y+ +I C+ +V + +L ++ G
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +NT++SG CR+G+ A L +E G+LP SG Y+ LI+A G +++
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKED---GTLPNSGCYNTLIRARLRDGDREAS 590
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G D T
Sbjct: 591 AELIKEMRSCGFAGDAST 608
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 217/454 (47%), Gaps = 30/454 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ F+ +L + K + ++M G+ + YTY+IL+ C +++ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L M G +PN V ++L++ C + ++ A +L+ M +PN VTF+ LI
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
A+ L+++ + G PD+VT V+ LC G D IL EQG+L
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT-DLAFILLNKMEQGKLE---- 253
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
P V Y +I C+ +D AL++F +M+ GI N VTY +LI
Sbjct: 254 --------------PGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
LC+ GR D ++L M + K + +++++ +E + EA + +M K +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPD--VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S I GFC+ +++AK+ F+ M+ + P+VV Y LI +C+ +RV E E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGME 417
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L +EM+ G + T+ T++ GL + G+ A ++ +E + G P Y+ L+
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKE---MVSDGVPPNIMTYNTLLD 474
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ G + A ++ + + P T+N ++
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F +I + + + K D + + ++ PS+ ++S+++ D +D A+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ D +Y+ L+KG C RV +G +L M RG+ N+V Y TLI L
Sbjct: 384 F-EFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD PN +T++ L+ CK L A+V+ E P +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D ++ +G V G CR KEM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LPN YN LI + G +++ ++ +M+ G + + T L+ + GR+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 621
Query: 288 D 288
D
Sbjct: 622 D 622
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 116/288 (40%), Gaps = 44/288 (15%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K+ EM + P++ ++ L+S+ + D + + M+ G+ N TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
LI C R +Q AL L +M
Sbjct: 121 ILINCFC-------------------------------------RRSQLPLALAVLGKMM 143
Query: 336 KL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
KL P V S + G+C + +A DQM G PN V ++ LIH +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHY 452
EA L+ M G P T+ V++GLC++G+ A L+ + + +G L PG Y
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNK----MEQGKLEPGVLIY 259
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ +I LC+ A L +M KGI P+ +T++SL+ CL W
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 211/443 (47%), Gaps = 36/443 (8%)
Query: 26 MINDVVKATDL---VSRFN------MTPSLKIFNSILDVLV-KEDIDLARAFYRKKMMAS 75
+IN V++ L +S FN P FN +L +V + +F+ + S
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN--KS 157
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
V D Y++ IL+KG C + F LL + G PN VIY TLI CK G++ +A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ L +M + N+ T+++LI K + EK G P++ T V+
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 192 LCSVGRVMDAVEILEESGEQG------RLGKVKGG-CRFLK---------EMERKGCLPN 235
LC GR DA ++ +E E+G + GG CR +K +M+ G PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TYN LI +C G L AL + D+K G+S + VTY+ L+ G C G K+++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCV 353
ME+ G K Y ++ R + ++A++ ME+L P S+ I GFC+
Sbjct: 398 EMEE--RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A R F M+E+ PN VIY+ +I YC+E A +L+KEM P ++
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 414 FNTVLSGLCRQGNVGTALKLVEE 436
+ ++ LC++ A +LVE+
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEK 538
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 202/453 (44%), Gaps = 57/453 (12%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +++ + + + M G P S +N L+ + + + S ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 144 EP---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ +F ILI C+ + + LL + FGF P+VV T +++ C G +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A ++ E G+ G + G K G ++M+ G PN+ TYN +++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS---- 300
C+ G A VF++M+ G+S N VTY+TLI GLC ++++ K++ M+
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 301 ----------------KEGS--------KGR-ISP----YNSVLYGLYRENQQDEALEYL 331
K G K R +SP YN ++ G R+ A + +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
K+ME+ + P V ++ I F N+E A + M E G VP+V Y LIH +C +
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
++ EAS L K M P +NT++ G C++G+ ALKL++E + P
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE---KELAPNV 513
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
Y +I+ LC++ + A L+ +M+ GI P
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 8/271 (2%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F E + K L +V ++ ILI CE G ++ + D+ ++ G S N V Y TLI G C
Sbjct: 151 FFNENKSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
G I+ + E K G Y ++ GL++ + + E ++M++ +FP
Sbjct: 210 KKGEIEKAKDLF--FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + C DG +DA + FD+M E G N+V Y+ LI C+E ++ EA++++
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G P T+NT++ G C G +G AL L D++ RG P Y+ L+ C
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC-RDLK--SRGLSPSLVTYNILVSGFC 384
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
KG A+ ++ +M +GI P +T+ L+
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 30/328 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE--DIDLARAF 67
+E + +I GL + + + + + + P+L +N +++ L K+ D + F
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M GV + TY L+ GLC ++ + K++ MKS G+ PN + YNTLI C
Sbjct: 292 --DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GK+G+A SL D++ P+ VT++IL+ +C++ + A ++++ G P V
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T T +++ + A+++ E G + G++ R K M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
K C PN YN +I YC+ G AL + +M+ ++ N +Y +I LC +
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ ++++ M DS I P S+L
Sbjct: 530 KEAERLVEKMIDSG------IDPSTSIL 551
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y+ +I++Y Q + + + EM +G++P ++ FN +L+ + + E+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + + LIK CE G + + LL+++ G P+ + + +L+
Sbjct: 156 KSKV----VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 219/438 (50%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M +G Q + T+ L+ GL L N+ + L+ M ++G +P+ V Y +++ LCK G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A +L++ ME EP + ++ +I CK +++ +AL L ++ + G P+VVT +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M + VTY+TLI+G C R+++G
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G YN ++ GL++ D A E K+M + + P + + +
Sbjct: 416 MEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A F+ + P + Y+ +I C+ +V + +L ++ G
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +NT++SG CR+G+ A L +E G+LP SG Y+ LI+A G +++
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKED---GTLPNSGCYNTLIRARLRDGDREAS 590
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G D T
Sbjct: 591 AELIKEMRSCGFAGDAST 608
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 211/442 (47%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F T+I GL ++ + D + P L + +++ L K D DLA
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM ++ Y ++ GLC + D L M+++G++PN V Y++LI LC
Sbjct: 244 L-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E P+ TFS LI A+ KE LV A L ++ P +V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A ++ E M K C P+V TYN LI
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEF-------------------MVSKHCFPDVVTYNTLI 403
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ ++ ++VF +M G+ N VTY+ LI+GL G D +I + M +G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM--VSDG 461
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ I G C G VED
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G P+VV Y+ +I +C++ EA L KEM G LP + +NT++
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 581 RLRDGDREASAELIKE-MRSCG 601
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 216/471 (45%), Gaps = 29/471 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ F+ +L + K + ++M G+ + YTY+IL+ C +++ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L M G +PN V ++L++ C + ++ A +L+ M +PN VTF+ LI
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK--- 216
A+ L+++ + G PD+VT V+ LC G A +L + EQG+L
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVL 257
Query: 217 -----VKGGCRF---------LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ G C++ KEME KG PNV TY+ LIS C G A + +DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
I+ + T+ LI G++ + K+ M K I Y+S++ G +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHD 375
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DEA + + M + FP V + I GFC VE+ F +M + G V N V Y+
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI Q A E+ KEM G P T+NT+L GLC+ G + A+ + E R
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I+ +C+ G + L + KG+ PD + +N+++
Sbjct: 496 KME---PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 192/440 (43%), Gaps = 41/440 (9%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+R+ SG DY + GL ++ D L M P+ + ++ L+ ++
Sbjct: 35 FWRRAF--SGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 91
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K K SL M+ N T+SILI +C+ L AL +L K G+ P++
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT++ +L C R+ +AV ++++ M G PN T+N L
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQ-------------------MFVTGYQPNTVTFNTL 192
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I A+ + + M G + VTY ++ GLC G D +L ME
Sbjct: 193 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME---- 248
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+G++ P YN+++ GL + D+AL K+ME + P V S I C G
Sbjct: 249 --QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
DA R MIE P+V + LI A+ +E ++ EA +L EM P T+++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++G C + A ++ E + + P Y+ LIK C+ + + +M
Sbjct: 367 LINGFCMHDRLDEAKQMFE---FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 477 GKGILPDYLTWNSLLICLSQ 496
+G++ + +T+N L+ L Q
Sbjct: 424 QRGLVGNTVTYNILIQGLFQ 443
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 23/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F +I + + + K D + + ++ PS+ ++S+++ D +D A+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ D TY L+KG C RV +G ++ M RG+ N+V YN LI L
Sbjct: 384 F-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD PN +T++ L+ CK L A+V+ E P +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D ++ +G V G CR KEM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LPN YN LI + G +++ ++ +M+ G + + T L+ + GR+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 621
Query: 288 D 288
D
Sbjct: 622 D 622
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 116/288 (40%), Gaps = 44/288 (15%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K+ EM + P++ ++ L+S+ + D + + M+ GI N TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
LI C R +Q AL L +M
Sbjct: 121 ILINCFC-------------------------------------RRSQLPLALAVLGKMM 143
Query: 336 KL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
KL P V S + G+C + +A DQM G PN V ++ LIH +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHY 452
EA L+ M G P T+ V++GLC++G+ A L+ + + +G L PG Y
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK----MEQGKLEPGVLIY 259
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ +I LC+ A L +M KGI P+ +T++SL+ CL W
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + T++ GL + + + + + R M P++
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-------------------- 502
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
TY I+++G+C +V DG+ L + +GVKP+ V YNT+I C
Sbjct: 503 ---------------TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A +L +M+E PN ++ LI A ++ + + L+++ S GF D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 184 TITKVLELL 192
TI V +L
Sbjct: 608 TIGLVTNML 616
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 200/402 (49%), Gaps = 25/402 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P FN++L +L++ + +A++ + S V D Y++ I++KG C GF+L
Sbjct: 122 PLSNTFNNLLCLLIRSNY-FDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRL 180
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L +++ G+ PN VIY TLI CK+G V A++L M PN T+S+L+ + K
Sbjct: 181 LAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFK 240
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+ + E G VP+ ++ C+ G V A ++ E E+G
Sbjct: 241 QGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMT 300
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
R K + + ++ + G PN+ TYNILI+ +C+ +DSA+ +FN +K
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLK 360
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+S VTY+TLI G + L +++ ME+ + + +++ Y ++ R N
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE-RCIAPSKVT-YTILIDAFARLNH 418
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
++A E MEK L P S+ + G CV GN+++A + F + E PN VIY+
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNT 478
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+IH YC+E A L+ EM G +P ++F + + LCR
Sbjct: 479 MIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCR 520
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 203/451 (45%), Gaps = 29/451 (6%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y ++ ++ LH M G P S +N L+ L ++ +A + ++++
Sbjct: 92 YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK 151
Query: 144 EP---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ +F I+I C+ V LL FG P+VV T +++ C G VM
Sbjct: 152 SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVML 211
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A + + G + G + G + + M+R G +PN YN LIS
Sbjct: 212 AKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC G++D A VF +M+ GI+ +TY+ LI GLC G + + +K++ + +K G
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH--KVNKVGL 329
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN ++ G + D A+ Q++ L P V + I G+ N+ A
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E P+ V Y LI A+ + +A E+ M G +P T++ +L GLC
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449
Query: 423 RQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
GN+ A KL + +G L P S Y+ +I C++G A LL +MV G++
Sbjct: 450 VHGNMKEASKL----FKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMV 505
Query: 482 PDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
P+ ++ S + L + W LLL +M++
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMIN 536
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 149/324 (45%), Gaps = 21/324 (6%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
FL M +G +P +T+N L+ + D A +FN++K + + ++ +I+G C
Sbjct: 111 FLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMIKGCC 169
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
G G ++L ++E+ G + Y +++ G ++ A +M + L P
Sbjct: 170 EAGYFVKGFRLLAMLEEF--GLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPN 227
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
S+ + GF G + + ++ M G VPN Y+CLI YC + V +A ++
Sbjct: 228 PHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFA 287
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM G T+N ++ GLCR G A+KLV + + G P Y+ LI C
Sbjct: 288 EMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNK---VGLSPNIVTYNILINGFC 344
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEM---------V 510
+ SA L Q+ G+ P +T+N+L+ S+ + L L+ EM V
Sbjct: 345 DVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKV 404
Query: 511 SFVMVV---HELSAKEKRCKLRSL 531
++ +++ L+ EK C++ SL
Sbjct: 405 TYTILIDAFARLNHTEKACEMHSL 428
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P + T+I G + + ++ A DLV + PS + ++D + +
Sbjct: 366 PTLVTYNTLIAGYSK---VENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKA 422
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M SG+ D YTY++L+ GLC+ + + KL + ++PNSVIYNT+IH
Sbjct: 423 CEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHG 482
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK G RA L+++M + PN +F I C++E A +LL + + G P
Sbjct: 483 YCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPS 542
Query: 182 V 182
V
Sbjct: 543 V 543
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+YD +++AY +A + M G++P+++TFN +L L R A + E
Sbjct: 91 LYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNE- 149
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + + + +IK CE G F LL + G+ P+ + + +L+
Sbjct: 150 ---LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 242/506 (47%), Gaps = 34/506 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL RAR++++ ++ + + P L ++ +++ E
Sbjct: 248 PNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 307
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G++ + TY L+ G + F++ M + G++ N +I+NTL++ +CK
Sbjct: 308 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 367
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ +A +M +M EP+ T+S+LI +C+ +N+ A LL++ P V+T
Sbjct: 368 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 427
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LC R G ++G L+EM G PN Y L++
Sbjct: 428 YSVIINGLC-------------------RCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 468
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
++ + G ++ + + M+ GI + Y++LI G C R+++ LME +
Sbjct: 469 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY--LMEMLERRL 526
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y + + G + + + A Y +M + P + I G C +GNV +A
Sbjct: 527 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 586
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ + +V Y LIH + ++ EA + E+ G LP A T+N+++SG C
Sbjct: 587 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 646
Query: 423 RQGNVGTALKLVEED-MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+QGNV A +L+EE ++GI P Y+ LI LC+ G + A L + G+G+
Sbjct: 647 KQGNVDKASQLLEEMCIKGIN----PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLT 702
Query: 482 PDYLTWNSLL--ICLSQQTTWLLLLL 505
P+ +T+ +++ C S+ T LL
Sbjct: 703 PNCVTYAAMVDGYCKSKNPTAAFQLL 728
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 242/547 (44%), Gaps = 64/547 (11%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-DVLVKEDI 61
S P+ IF ++ + + + V F PSL NS+L D+L +
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 196
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+L + M A V D YTY ++ C V D ++L M +G PN V YN
Sbjct: 197 ELFWKVF-DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNV 255
Query: 122 LIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I LC+ + A RS++ P+ T+ ILI +C E+ A ++L + G
Sbjct: 256 IIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 315
Query: 178 FVPDVVTITK-----------------------------------VLELLCSVGRVMDAV 202
P+ +T +L +C G++ A+
Sbjct: 316 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 375
Query: 203 EILEESGEQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSY 246
EI++E E+G ++G CR L EM+++ P V TY+++I+
Sbjct: 376 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 435
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G L + +M ++G+ N V Y TL+ GR+++ IL+ M + +G
Sbjct: 436 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMRE--QGILP 493
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ YNS++ G + + +EA YL +M +L P A I G+ G +E A R F
Sbjct: 494 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 553
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++M+ G +PNV IY LI +C+E V EA + + + L T++ ++ GL R
Sbjct: 554 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 613
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A + E +G LP + Y+ LI C++G AS LL +M KGI PD
Sbjct: 614 GKMHEAFGIFSELQE---KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDI 670
Query: 485 LTWNSLL 491
+T+N L+
Sbjct: 671 VTYNILI 677
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/557 (26%), Positives = 247/557 (44%), Gaps = 60/557 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I G R + + + D + + + P++ ++ I++ L + ++ A
Sbjct: 388 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 447
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ M+ +G++ + Y LM RV + +L M+ +G+ P+ YN+LI C
Sbjct: 448 LRE-MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ AR+ + +M E PN T+ I Y K + A + S G +P+V
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566
Query: 184 TITKVLELLCSVGRVMDAVE----ILEESGEQ------------GRLGKVKGGCRFLKEM 227
T ++E C G V +A IL Q R GK+ E+
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ KG LPN TYN LIS C+ G +D A + +M I GI+ + VTY+ LI GLC G I
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686
Query: 288 D-------------------------DGL-------KILQLMEDS-KEGSKGRISPYNSV 314
+ DG QL+E+ G YN +
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746
Query: 315 LYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
L +E + ++AL+ ++M EK F V + I G+C G +++A ++MIE+ +
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN V Y LI C+ + EA L EM +P A T+ ++L G GN+ L
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
EE + +G P Y +I A C +G A L +++ KG+ +++L+
Sbjct: 867 FEE---MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQA 923
Query: 494 LSQQTTWL-LLLLLNEM 509
L ++ + +L LLNE+
Sbjct: 924 LCKKEEFFEVLKLLNEI 940
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 216/487 (44%), Gaps = 49/487 (10%)
Query: 30 VVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY--RKKMMASGVQGDDYTYAIL 87
+++++D+ + N I + IL V + L FY + KM S Q D + L
Sbjct: 42 LMESSDIPKKLNTDI---IRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSAL 98
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND 147
LC +N G L+ + P +V+ + + NG PN
Sbjct: 99 AVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGS-------------PNS 145
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT----------------KVLEL 191
V F +L+ +Y K LV A+ + +F F P +++ KV +
Sbjct: 146 VIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDG 205
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+C+ + D ++G VK R L EM KGC PN+ TYN++I C +
Sbjct: 206 MCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARL 265
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+++ M G+ + TYD LI G C R + L L+E G K Y
Sbjct: 266 LDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAK--LMLLEMIDVGLKPEPITY 323
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL-----GFCVDGNVEDAKRCFDQ 366
N+++ G R+ ++A +M ++ +L I G C G +E A +
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEM---VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQE 380
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+E+G P+ Y LI +C+ + + A EL+ EM P T++ +++GLCR GN
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN 440
Query: 427 V-GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ GT L E M G+ P + Y+ L+ A ++G + + M+L +M +GILPD
Sbjct: 441 LQGTNAILREMVMNGLK----PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 496
Query: 486 TWNSLLI 492
+NSL+I
Sbjct: 497 CYNSLII 503
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 185/415 (44%), Gaps = 43/415 (10%)
Query: 41 NMTPSLKIFNSILDVLVKEDID--------------LARAF-YRKKMMASGVQGDDYTYA 85
N+T + +F IL V +D+ + AF ++ G+ + +TY
Sbjct: 580 NVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYN 639
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
L+ G C V +LL M +G+ P+ V YN LI LCK G++ RA++L D+E
Sbjct: 640 SLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGR 699
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN VT++ ++ YCK +N A LLE+ G PD +L C + A
Sbjct: 700 GLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKA 759
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+++ +E E+G V ++N LI YC++G L A + +
Sbjct: 760 LDLFQEMLEKGFASTV--------------------SFNTLIEGYCKSGKLQEANHLLEE 799
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M N VTY +LI C G + + ++ M++ + Y S+L+G +
Sbjct: 800 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT--YTSLLHGYHNI 857
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
E ++M + + P + + I +C +GNV +A + D+++ +G +V Y
Sbjct: 858 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAY 917
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
D LI A C++E E +L+ E+ G+ T + + G GN+ A +++
Sbjct: 918 DALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVL 972
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 166/367 (45%), Gaps = 34/367 (9%)
Query: 29 DVVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTY 84
+V KA+ L+ + P + +N ++D L K +I+ A+ + + G+ + TY
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF-DDIEGRGLTPNCVTY 708
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
A ++ G C + F+LL M RGV P++ IYN +++ CK K +A L +M E
Sbjct: 709 AAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+ V+F+ LI YCK L A LLE+ F+P+ VT T +++ C G + +A
Sbjct: 769 KGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEA 828
Query: 202 VEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ E E+ +G + +EM KG P+ TY ++I +
Sbjct: 829 KRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 888
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC G + A + +++ + G+ + YD LI+ LC + LK+L E + G +
Sbjct: 889 YCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLN--EIGESGFR 946
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG-----NVEDA 360
+ + + G DEA E L+ M K + S LG VDG N ED+
Sbjct: 947 LGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTS---LGDLVDGNQNGANSEDS 1003
Query: 361 KRCFDQM 367
QM
Sbjct: 1004 DNLLKQM 1010
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 215/438 (49%), Gaps = 27/438 (6%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ + +Y I++ LC +V + +LL M R P+ V Y+T+I C G++ +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
LM DM+ +PN T++ +I CK A +L + S +PD V T ++
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 192 LCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPN 235
+G V A + +E + G+ GKV EM +G P+
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TY LI YC+ G + +A + N+M G++ N VTY LI GLC G +D ++L
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCV 353
M K+G + + YNS++ G+ + ++A++ +K+ME + P A+ + I +C
Sbjct: 493 EMR--KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G+++ A + +M++ G P VV ++ L++ +C + + L+ M G +P A T
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+NT++ C + ++ T K+ + R +G P S Y+ LIK C+ + A L
Sbjct: 611 YNTLMKQHCIRNSMNTTTKIYK---RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667
Query: 474 QMVGKGILPDYLTWNSLL 491
+M+ KG +P ++N+L+
Sbjct: 668 EMIEKGYVPTVTSYNALI 685
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 216/446 (48%), Gaps = 31/446 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G++ + YTY ++ LC + + K+L M S+ + P++V+Y TLIH K G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V A +M P+ +T++ LI + + ++ L + S G PD VT T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++++ C G +++A + E M + G PN+ TY LI C
Sbjct: 439 LIDVYCKAGEMVNAFSLHNE-------------------MVQMGMTPNIVTYGALIDGLC 479
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G LD+A ++ ++M+ G+ N Y++++ G+C G I+ +K+++ ME + G
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA--GIDPD 537
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y +V+ R D+A + L++M L P V ++ + GFC+ G +ED R
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M+E+G VP+ + Y+ L+ +C + +++ K M G P ++T+N ++ G C+
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
N+ A L +E I +G +P Y+ LIK +K A L +M G G++ D
Sbjct: 658 NLKEAWFLYKE---MIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGE 714
Query: 486 TWNSLL-ICLSQQTTWLLLLLLNEMV 510
+N + +C + + L L +E +
Sbjct: 715 IYNFFVDMCYEEGDVEITLNLCDEAI 740
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 215/452 (47%), Gaps = 24/452 (5%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S PD + TVI G + +K D + + P+ +NSI+ +L K
Sbjct: 289 STPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAE 348
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++MM+ + D+ Y L+ G V K M S+ + P+ + Y TLI
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+ GKV ++L +M +P++VT++ LI YCK +VNA L + G P++
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT +++ LC G + A E+L+E ++G + G ++ + +KE
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME G P+ TY +I +YC G +D A + +M G+ VT++ L+ G C G
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
++DG ++L M + +G YN+++ N + + K+M + + P +
Sbjct: 589 LEDGDRLLGWMLE--KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ I G C N+++A + +MIE+G VP V Y+ LI + +++++ EA EL +EM G
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG 706
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
HG + +N + +G+V L L +E
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 175/363 (48%), Gaps = 21/363 (5%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD-AVE 203
PN + F I + +L A LL+K S+G V V + L + + ++ A++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247
Query: 204 ILEESGEQG-------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ E G RLGKVK R L +M+ + P+V +Y+ +I YC G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
L AL + +DM+I G+ N TY+++I LC G+ + K+L+ M K +
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV-- 365
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y ++++G ++ A ++ +M +K+ P + + I GF G V + + F +MI
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+ V Y LI YC+ + A L EM G P T+ ++ GLC+ G +
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
TA +L++E MR +G Y+ ++ +C+ G + A L+ +M GI PD +T+
Sbjct: 486 TANELLDE-MR--KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 489 SLL 491
+++
Sbjct: 543 TVI 545
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 254/536 (47%), Gaps = 35/536 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
D I+ ++ +A +ND + + + ++ P +K N +L LVK D I AR Y
Sbjct: 173 DIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVY 232
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM+ GV GD +T I+M+ N + K KSRGVK ++ Y+ +I + CK
Sbjct: 233 -EKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCK 291
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N V A L+ DM + P++ TF+ +I A K+ N+V AL L ++ S G +VV
Sbjct: 292 NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVV 351
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T +++ C +++ A+E ++ E G + G + +M+
Sbjct: 352 ATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMK 411
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K P V N LI + + + A +F++ I+ N TY++L+ LC G++
Sbjct: 412 NKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMS 470
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ + Q M D K + ++S YNS++ G R+ D A M L P + S+
Sbjct: 471 EATTLWQKMLD-KGLAPTKVS-YNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSI 528
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G+ +G+ E A FD+M++E VP+ Y+ I+ C+ R EA +++K+ G
Sbjct: 529 LMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKG 588
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
++P+ T+N+++ G ++G+V +AL E G P Y+ LI C+
Sbjct: 589 FVPVCLTYNSIMDGFIKEGSVSSALTAYREMCES---GVSPNVITYTTLINGFCKNNNTD 645
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ---TTWLLLLLLNEMVSFVMVVH 517
A + +M KG+ D + +L+ C Q +WL LL+ +S V++
Sbjct: 646 LALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIY 701
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 212/475 (44%), Gaps = 61/475 (12%)
Query: 29 DVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
++ KA DL ++ N+ P++ I NS++ +K + + + +A + + +TY
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYN 457
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
L+ LC ++ + L M +G+ P V YN++I C+ G + A S+ SDM +
Sbjct: 458 SLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC 517
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN +T+SIL+ Y K + A + ++ VP T + LC VGR +A
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577
Query: 202 VEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++L++ E+G + G V +EM G PNV TY LI+
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID----------------- 288
+C+ D AL + N+M+ G+ + Y LI G C I+
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPN 697
Query: 289 --------DGLKILQLMEDS--------KEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
G + L ME + EG + Y +++ GL +E + AL+
Sbjct: 698 SVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYS 757
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M + P + ++ I G C G +E+A++ +M + PNV IY+ LI + +
Sbjct: 758 EMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAG 817
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN--VGTALKLVEEDMRGIGR 443
++EA L EM G P +T++ +++G + GN + + L L +D +G+ R
Sbjct: 818 NLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLLSLKFKDGKGMKR 872
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/537 (23%), Positives = 225/537 (41%), Gaps = 92/537 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P E F +VI + + + ++ D + + ++ + +++ K+D ++ +
Sbjct: 312 PSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEF 371
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP-----NSVI----- 118
KM +G + TYA+L++ C + + L MK++ + P NS+I
Sbjct: 372 FDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLK 431
Query: 119 ------------------------YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
YN+L+ LCK GK+ A +L M + P V++
Sbjct: 432 VESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSY 491
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ +I +C++ NL A + G P+V+T + +++ G A + + +
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVD 551
Query: 211 QGRLG-------KVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
+ + K+ G C+ LK+ KG +P TYN ++ + + G + S
Sbjct: 552 ENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS 611
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
AL + +M G+S N +TY TLI G C D LK+ M + +G + I+ Y ++
Sbjct: 612 ALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRN--KGLELDIAAYGAL 669
Query: 315 LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
I GFC ++E A F ++++ G P
Sbjct: 670 ---------------------------------IDGFCKKQDIETASWLFSELLDGGLSP 696
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
N VIY+ LI Y + A L K M G G T+ T++ GL ++G + AL L
Sbjct: 697 NSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E +G +P Y+ LI LC KG ++A +L +M I P+ +N+L+
Sbjct: 757 SE---MSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 166/363 (45%), Gaps = 50/363 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLA 64
P + + I GL + + +A D++ +F P +NSI+D +KE + A
Sbjct: 556 PSDFTYNIKINGLCK---VGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSA 612
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
YR+ M SGV + TY L+ G C N K+ + M+++G++ + Y LI
Sbjct: 613 LTAYRE-MCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK + A L S++ + PN V ++ LI Y N+ AL L ++ G
Sbjct: 672 GFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISC 731
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFL 224
D+ T T +++ L GR++ A+++ E +G + G+++ + L
Sbjct: 732 DLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKIL 791
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EMER PNV YN LI+ + + G L A + N+M G++ N TYD LI G G
Sbjct: 792 AEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKG 851
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
G + LK L L K+G G+ R N+QD ++K+ +AV++
Sbjct: 852 G--NSALKSL-LSLKFKDGK------------GMKRINEQD-------SIKKVIEKAVNK 889
Query: 345 SLK 347
L+
Sbjct: 890 YLR 892
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 239/538 (44%), Gaps = 62/538 (11%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE----- 59
+ PP+ F V+RGL I D ++ D +S P +++ IL+ +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 60 DIDLARAFYRK------------------------------KMMASGVQGDDYTYAILMK 89
+ + A + K K+ G + D +Y ++K
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
GLC+ R GD +L+ M PN V +NTLI LC+NG R +++ M E P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ ++ +I CKE +L A +L + S+G P+VV VL+ LCS R +A E+L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 206 EESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
E ++ + G V L++M GC+P+V TY +I+ +C+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G++D A+ + M G N V+Y +++GLCS GR D +++ M ++G
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM--IQQGCPPNPV 462
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+N+++ L ++ ++A+E LKQM P + S I G G E+A + M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ +G PN +IY + A +E RV + ++ + A +N V+S LC++
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A+ + G +P Y+ LIK L +G + A LL ++ +G L +L
Sbjct: 583 DRAIDFFA---YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 212/442 (47%), Gaps = 31/442 (7%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V + YT+ +++GLC R+ D ++L M +G P +Y+ ++ + C++G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ M + ++++ A C++ + A+ LL K FG D+V+ VL+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C R D E+++ EM R C PN+ T+N LI C G+
Sbjct: 227 CMAKRWGDVEELMD-------------------EMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ +V M G + + Y T+I G+C G ++ +IL M G K + YN
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY--GLKPNVVCYN 325
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEE 370
+VL GL + EA E L +M + D + IL FC +G V+ +QM+
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +P+V+ Y +I+ +C+E + EA L+K M+ G P ++ VL GLC G A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+ + I +G P ++ LI LC+KG + A LL QM+ G PD ++++++
Sbjct: 446 EELMSQ---MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 491 LICLSQQ-TTWLLLLLLNEMVS 511
+ L + T L LLN MV+
Sbjct: 503 IDGLGKAGKTEEALELLNVMVN 524
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 162/365 (44%), Gaps = 36/365 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P D+ F ++ + +++ V++ + + P + + ++++ KE +
Sbjct: 353 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVM 412
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M + G + + +Y I++KGLC R D +L+ M +G PN V +NTLI+ LC
Sbjct: 413 LLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 472
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +A L+ M P+ +++S +I K AL LL + G P+ +
Sbjct: 473 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTI 532
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ + C++ R +GR+ KV + ++ + YN +I
Sbjct: 533 IYSSI---ACALSR-------------EGRVNKVI---QMFDNIKDTTIRSDAVLYNAVI 573
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
SS C+ D A+D F M +G N TY LI+GL S G + ++L S+
Sbjct: 574 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL-----SELC 628
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK----ILGFCVDGNVED 359
S+G + + +G+ Q++ ++ E+ AVD + K ILGF N+
Sbjct: 629 SRGALRKHLMRHFGISNCTQENGK----QKCEENLTSAVDNNYKLPIEILGFLEIQNLRP 684
Query: 360 AKRCF 364
++ F
Sbjct: 685 GEKQF 689
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 52/347 (14%)
Query: 192 LCSVGRVMDAVEILEESGEQGRL----GKVKGGCR------------------------- 222
LCS GR +A L ++G+ + V G CR
Sbjct: 57 LCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP 116
Query: 223 ----------------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
L EM KGC P Y++++ + C +G +++ V M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + + ++ +C G +D+ + +L+ + + G + I YN+VL GL + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKL--AFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 327 ALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
E + +M ++ P V + I C +G E QM E G P++ +Y +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
C+E + A+E++ M +G P +NTVL GLC A +L+ E + +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ---KD 351
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ L+ C+ G LL QM+ G +PD +T+ +++
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 183/370 (49%), Gaps = 27/370 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KMM G + T+ L+ G CL NR+GD F L+ +M G +PN V+YNTLI LCKNG
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L+++ME+ + VT++ L+ C +A +L PDVVT T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++++ G + +A E+ KEM + PN TYN +I+
Sbjct: 251 ALIDVFVKQGNLDEAQELY-------------------KEMIQSSVDPNNVTYNSIINGL 291
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G L A F+ M G N VTY+TLI G C +D+G+K+ Q M S EG
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--SCEGFNA 349
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN++++G + + AL+ M ++ P + + + G CV+G +E A F
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D M E +V Y+ +IH C+ ++V +A EL + G P A T+ ++ GLC+
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 425 GNVGTALKLV 434
G A +L+
Sbjct: 470 GPRREADELI 479
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 182/413 (44%), Gaps = 47/413 (11%)
Query: 64 ARAF--YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
ARAF YR+K L G + R D F L M P+ V +
Sbjct: 32 ARAFSDYREK---------------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTR 76
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+ + + ME + +F+ILI +C+ L AL +L K G
Sbjct: 77 LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ P +VT +L C V R+ DA ++ M + G PNV
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLV-------------------ILMVKSGYEPNVV 177
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
YN LI C+ G L+ AL++ N+M+ G+ + VTY+TL+ GLC GR D ++L+ M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
K + + +++ ++ DEA E K+M + P V + I G C+ G
Sbjct: 238 --MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ DAK+ FD M +G PNVV Y+ LI +C+ V E +L + M+ G+ T+N
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
T++ G C+ G + AL + + R P + L+ LC G +SA
Sbjct: 356 TLIHGYCQVGKLRVALDIF---CWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 32/281 (11%)
Query: 24 ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDY 82
ARM+ D++K + + P + F +++DV VK+ ++D A+ Y K+M+ S V ++
Sbjct: 231 ARMLRDMMKRS-------INPDVVTFTALIDVFVKQGNLDEAQELY-KEMIQSSVDPNNV 282
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY ++ GLC+ R+ D K +M S+G PN V YNTLI CK V L M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ T++ LI YC+ L AL + S PD++T +L LC G +
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
A+ ++ ++E E+ + YNI+I C+ ++ A ++
Sbjct: 403 ESALVKFDD----------------MRESEK---YIGIVAYNIMIHGLCKADKVEKAWEL 443
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
F + ++G+ + TY +I GLC G + ++++ M++
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 42/303 (13%)
Query: 226 EMERKGCLPNV-----------------------------------DTYNILISSYCETG 250
EM LP++ ++ ILI +C
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
L AL V M G + VT+ +L+ G C RI D ++ LM K G + +
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM--VKSGYEPNVVV 178
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN+++ GL + + + ALE L +MEK L V + + G C G DA R M+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ P+VV + LI + ++ + EA EL KEM P T+N++++GLC G +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A K D+ +G P Y+ LI C+ L +M +G D T+N
Sbjct: 299 DAKKTF--DLMA-SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 489 SLL 491
+L+
Sbjct: 356 TLI 358
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 364 FDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F Q +E G+ ++ + LIH +C+ R+ A ++ +M GY P TF ++L G C
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+G A LV + + G P Y+ LI LC+ G A LL +M KG+
Sbjct: 153 LVNRIGDAFSLV---ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 483 DYLTWNSLLICLSQQTTW 500
D +T+N+LL L W
Sbjct: 210 DVVTYNTLLTGLCYSGRW 227
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 183/372 (49%), Gaps = 27/372 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KMM G + T+ L+ G CL NR+GD F L+ +M G +PN V+YNTLI LCKNG
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L+++ME+ + VT++ L+ C +A +L PDVVT T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++++ G + +A E+ KEM + PN TYN +I+
Sbjct: 251 ALIDVFVKQGNLDEAQELY-------------------KEMIQSSVDPNNVTYNSIINGL 291
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G L A F+ M G N VTY+TLI G C +D+G+K+ Q M S EG
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--SCEGFNA 349
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN++++G + + AL+ M ++ P + + + G CV+G +E A F
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D M E +V Y+ +IH C+ ++V +A EL + G P A T+ ++ GLC+
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 425 GNVGTALKLVEE 436
G A +L+
Sbjct: 470 GPRREADELIRR 481
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 198/407 (48%), Gaps = 40/407 (9%)
Query: 96 RVGDGFKLL-HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TF 150
+ D F L +++SR + P+ V + ++ + K K L ME +D+ +F
Sbjct: 584 KFDDAFSLFCEMLQSRPI-PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSF 642
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ILI +C+ L AL LL K GF P +VT+ +L C R +AV +++
Sbjct: 643 TILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS--- 699
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M+ G +PNV YN +I+ C+ L++AL+VF M+ GI +
Sbjct: 700 ----------------MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 743
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDE 326
VTY+TLI GL + GR D ++L+ M K +I P + +++ +E E
Sbjct: 744 AVTYNTLISGLSNSGRWTDAARLLRDM------VKRKIDPNVIFFTALIDTFVKEGNLLE 797
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A K+M + P + I GFC+ G + DAK FD M+ +G P+VV Y+ LI
Sbjct: 798 ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLIT 857
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+C+ +RV + +L EMT G + A T+NT++ G C+ G + A K+ R + G
Sbjct: 858 GFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN---RMVDCG 914
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ LC G + A +++ + + D +T+N ++
Sbjct: 915 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 206/493 (41%), Gaps = 63/493 (12%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
+QS P SI F V+ + + + V+ + ++ L F ++ +
Sbjct: 596 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 655
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
KMM G + T L+ G C NR + L+ M G PN VIYNT+
Sbjct: 656 SLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV 715
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I+ LCKN + A + ME+ + VT++ LI +A LL
Sbjct: 716 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 775
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+V+ T +++ G +++A + KEM R+ +PNV T
Sbjct: 776 DPNVIFFTALIDTFVKEGNLLEARNL-------------------YKEMIRRSVVPNVFT 816
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN LI+ +C G L A +F+ M G + VTY+TLI G C R++DG+K+ E
Sbjct: 817 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL--FCE 874
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
+ +G G YN++++ G+C G +
Sbjct: 875 MTYQGLVGDAFTYNTLIH---------------------------------GYCQAGKLN 901
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A++ F++M++ G P++V Y+ L+ C ++ +A +++++ T+N ++
Sbjct: 902 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GLCR + A L R +G P + Y +I LC KG + A L +M
Sbjct: 962 QGLCRTDKLKEAWCLFRSLTR---KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 1018
Query: 479 GILPDYLTWNSLL 491
G +P ++ L
Sbjct: 1019 GFMPSERIYDETL 1031
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 182/413 (44%), Gaps = 47/413 (11%)
Query: 64 ARAF--YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
ARAF YR+K L G + R D F L M P+ V +
Sbjct: 32 ARAFSDYREK---------------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTR 76
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+ + + ME + +F+ILI +C+ L AL +L K G
Sbjct: 77 LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ P +VT +L C V R+ DA ++ M + G PNV
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLV-------------------ILMVKSGYEPNVV 177
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
YN LI C+ G L+ AL++ N+M+ G+ + VTY+TL+ GLC GR D ++L+ M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
K + + +++ ++ DEA E K+M + P V + I G C+ G
Sbjct: 238 --MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ DAK+ FD M +G PNVV Y+ LI +C+ V E +L + M+ G+ T+N
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
T++ G C+ G + AL + + R P + L+ LC G +SA
Sbjct: 356 TLIHGYCQVGKLRVALDIF---CWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M + G P++ T L++ +C+ A+ + + M G N V Y+T+I GLC
Sbjct: 664 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 723
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+++ L++ ME K+G + YN+++ GL + +A L+ M K+ P +
Sbjct: 724 DLNNALEVFYCME--KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I F +GN+ +A+ + +MI VPNV Y+ LI+ +C + +A + M
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P T+NT+++G C+ V +KL E +G + + Y+ LI C+ G
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY---QGLVGDAFTYNTLIHGYCQAG 898
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
A + +MV G+ PD +T+N LL CL
Sbjct: 899 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 929
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 225/543 (41%), Gaps = 79/543 (14%)
Query: 24 ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDY 82
ARM+ D++K + + P + F +++DV VK+ ++D A+ Y K+M+ S V ++
Sbjct: 231 ARMLRDMMKRS-------INPDVVTFTALIDVFVKQGNLDEAQELY-KEMIQSSVDPNNV 282
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY ++ GLC+ R+ D K +M S+G PN V YNTLI CK V L M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ T++ LI YC+ L AL + S PD++T +L LC G +
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 199 MDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNIL 242
A+ ++ E + KV+ + +G P+ TY I+
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C+ G A ++ MK +GI D + S + + L + ++ E SK
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNK-EISLSLREIWERSKS 521
Query: 303 GS--KGRISP--YNSVLYGL------------------------------YRENQQ---- 324
R+ P ++S + G YRE +
Sbjct: 522 NPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELH 581
Query: 325 ----DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP-NVV 377
D+A +M + P VD + ++L N D +E G+ ++
Sbjct: 582 CIKFDDAFSLFCEMLQSRPIPSIVDFT-RVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 640
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+ LIH +C+ R+ A L+ +M G+ P T ++L+G C+ A+ LV+
Sbjct: 641 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDS- 699
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
M G G +P Y+ +I LC+ +A + M KGI D +T+N+L+ LS
Sbjct: 700 MDGFG--FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 757
Query: 498 TTW 500
W
Sbjct: 758 GRW 760
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 42/303 (13%)
Query: 226 EMERKGCLPNV-----------------------------------DTYNILISSYCETG 250
EM LP++ ++ ILI +C
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
L AL V M G + VT+ +L+ G C RI D ++ LM K G + +
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM--VKSGYEPNVVV 178
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN+++ GL + + + ALE L +MEK L V + + G C G DA R M+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ P+VV + LI + ++ + EA EL KEM P T+N++++GLC G +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A K D+ +G P Y+ LI C+ L +M +G D T+N
Sbjct: 299 DAKKTF--DLMA-SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 489 SLL 491
+L+
Sbjct: 356 TLI 358
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 364 FDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F Q +E G+ ++ + LIH +C+ R+ A ++ +M GY P TF ++L G C
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+G A LV + + G P Y+ LI LC+ G A LL +M KG+
Sbjct: 153 LVNRIGDAFSLV---ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 483 DYLTWNSLLICLSQQTTW 500
D +T+N+LL L W
Sbjct: 210 DVVTYNTLLTGLCYSGRW 227
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 224/462 (48%), Gaps = 36/462 (7%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYT--YAILMKGLCLTNRVG 98
N P + N L LV+ DL A + M SG++ A L+K LC + R
Sbjct: 54 NAVPHRAVSNDRLRGLVRRG-DLEEALRLVESM-SGLEPSAAPGPCAALIKKLCASGRTA 111
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-EPNDVTFSILICAY 157
+ ++L +P+ + YN ++ C G++ AR L++DM EP+ T++ LI
Sbjct: 112 EARRVLA-----ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGL 166
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
C NALV+L+ G VPDVVT T +LE C + SG
Sbjct: 167 CGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATC------------KRSG-------Y 207
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
K + L EM KGC P++ TYN++++ C+ G +D A++ + G N V+Y+ +
Sbjct: 208 KQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIV 267
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
++GLC+ R +D K++ M S++G + +N ++ L R + A+E L Q+ K
Sbjct: 268 LKGLCTAERWEDAEKLMAEM--SQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKY 325
Query: 338 --FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P ++ + + FC ++ A + M+ G P++V Y+ L+ A C+ V A
Sbjct: 326 GCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAA 385
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL+ ++ G P+ ++NTV+ GL + G AL+L+ E + +G P YS +
Sbjct: 386 VELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNE---MVTKGLQPDIITYSTI 442
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LC + + A ++ GI P+ + +N++L+ L ++
Sbjct: 443 SSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKR 484
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 205/416 (49%), Gaps = 29/416 (6%)
Query: 44 PSLKIFNSILD-VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + +N+++ V +D AR M + D YTY L++GLC R G+
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMPM----EPDSYTYNTLIRGLCGRGRTGNALV 177
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+L M RG P+ V Y L+ + CK +A L+ +M P+ +T+++++ C
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
+E + +A+ L+ S G P+ V+ VL+ LC+ R DA +++ E ++G
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R G V+ L ++ + GC PN +YN ++ ++C+ +D A+ M
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + V+Y+TL+ LC GG +D +++L ++D +G + YN+V+ GL +
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD--KGCTPVLISYNTVIDGLTKAG 415
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ EALE L +M + L P + S G C + +E+A R F ++ + G PN V+Y+
Sbjct: 416 KTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYN 475
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ C+ A +L M +G +P ST+ ++ GL +G V A +L+ E
Sbjct: 476 AILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGE 531
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 203/411 (49%), Gaps = 41/411 (9%)
Query: 9 PDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + T+IRGL GR R N +V D++ R P + + +L+ K R+
Sbjct: 154 PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRR-GCVPDVVTYTILLEATCK------RSG 206
Query: 68 YRK------KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
Y++ +M A G D TY +++ G+C RV D + L + S G +PN+V YN
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
++ LC + A LM++M + PN VTF++LI C+ + A+ +L++ +G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P+ ++ +L C +Q ++ + F++ M +GC P++
Sbjct: 327 CTPNSLSYNPILHAFC----------------KQKKMDRAMA---FVELMVSRGCYPDIV 367
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+YN L+++ C G +D+A+++ + +K G + ++Y+T+I GL G+ + L++L M
Sbjct: 368 SYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEM 427
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
+G + I Y+++ GL RE++ +EA+ +++ + P V + +LG C
Sbjct: 428 --VTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRR 485
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+A F MI G +PN Y LI E V+EA EL+ E+ G
Sbjct: 486 ETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRG 536
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 170/337 (50%), Gaps = 26/337 (7%)
Query: 197 RVMDAVEILEESGEQGRLGK-VKGGCRFLKEMERK----GCLPNVDTYNILISSYCETGV 251
R+++++ LE S G +K C + E + C P+V YN +++ YC TG
Sbjct: 80 RLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQ 139
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD+A + DM ++ S+ TY+TLIRGLC GR + L +L M + G + Y
Sbjct: 140 LDAARRLVADMPMEPDSY---TYNTLIRGLCGRGRTGNALVVLDDM--LRRGCVPDVVTY 194
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+L + + +A++ L +M P + ++ + G C +G V+DA +
Sbjct: 195 TILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPS 254
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G PN V Y+ ++ C ER +A +LM EM+ GY P TFN ++S LCR+G V
Sbjct: 255 HGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEP 314
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A++++++ + G P S Y+P++ A C++ A + MV +G PD +++N+
Sbjct: 315 AMEVLDQIPK---YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNT 371
Query: 490 LLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
LL L + E+ + V ++H+L K+K C
Sbjct: 372 LLTALCRG---------GEVDAAVELLHQL--KDKGC 397
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 25/265 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PP+ F +I L R ++ ++ D + ++ TP+ +N IL K+ +D A A
Sbjct: 293 PPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 352
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + M++ G D +Y L+ LC V +LLH +K +G P + YNT+I L
Sbjct: 353 FV-ELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 411
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K GK A L+++M +P+ +T+S + C+E+ + A+ K G P+
Sbjct: 412 TKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNT 471
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V +L LC +A+++ F+ M GC+PN TY IL
Sbjct: 472 VLYNAILLGLCKRRETHNAIDL------------------FIY-MISNGCMPNESTYTIL 512
Query: 243 ISSYCETGVLDSALDVFNDMKIDGI 267
I G++ A ++ ++ G+
Sbjct: 513 IEGLTYEGLVKEARELLGELCSRGV 537
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-----DIDL 63
PD + T+ GL R I + ++A V + P+ ++N+IL L K IDL
Sbjct: 434 PDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDL 493
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
Y M+++G ++ TY IL++GL V + +LL + SRGV +I I
Sbjct: 494 F--IY---MISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAI 548
Query: 124 HSL 126
L
Sbjct: 549 RLL 551
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/541 (25%), Positives = 244/541 (45%), Gaps = 56/541 (10%)
Query: 28 NDVVKATDLVSRF-NMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYA 85
N + + L RF + P + +N + +KE +D Y K M + V+ YT+
Sbjct: 99 NAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLY-KDMAVAKVKPQTYTFN 157
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
+L+ LC + + ++ M +G KPN L+ C+ G L+ +M
Sbjct: 158 LLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSS 217
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN V ++ +I + C E V A L+EK G PD+VT + LC G++++A
Sbjct: 218 GALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEA 277
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
I + +G K PN TYN+++ +C G+ + A +F+
Sbjct: 278 SRIFRDMQIDEEMGLPK---------------PNTVTYNLMLEGFCSEGMFEEARAIFDS 322
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
MK + + + +Y+ + GL G++ + IL M +++ K + YN +++GL +
Sbjct: 323 MK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEM--AEKNIKPNLYSYNILVHGLCKY 379
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+A L M + + P V S + G+C G + +A +MI+ G PN+
Sbjct: 380 GMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTC 439
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--- 436
+ L+H+ +E R EA +L++ M GY T NT+++GLC+ GN+ A+++V
Sbjct: 440 NILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWT 499
Query: 437 -----------------DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
D+R G+ LP S Y+ +I LC+ G A L++M+GK
Sbjct: 500 RGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKK 559
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAG 539
+ PD L +++ + +Q ++ S V+ E+ K LR+ N L G G
Sbjct: 560 LSPDSLIFDTFIYNYCKQ---------GKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLG 610
Query: 540 S 540
S
Sbjct: 611 S 611
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 241/545 (44%), Gaps = 58/545 (10%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
PH PP S + + R + ++ V+ ++ + P FN ++ L +
Sbjct: 111 FPHD---PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMG 167
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++ AR + KM G + ++++ IL++G C G LL M+S G PN V Y
Sbjct: 168 YLENAREVF-DKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAY 226
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL---LEK 172
NT+I SLC G+ A L+ M E P+ VTF+ I A CK ++ A + ++
Sbjct: 227 NTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQI 286
Query: 173 SFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGK 216
G P+ VT +LE CS G +A I + R GK
Sbjct: 287 DEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGK 346
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
+ L EM K PN+ +YNIL+ C+ G+ A + M+ G++ + VTY T
Sbjct: 347 LLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYST 406
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-E 335
L+ G C G+I + +L+ M + G + N +L+ L++E + EA + L+ M E
Sbjct: 407 LLHGYCRRGKILEANYVLREM--IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNE 464
Query: 336 KLFP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG---------------------- 372
+ + V + I G C GN++ A M G
Sbjct: 465 RGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKK 524
Query: 373 -VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+P+ + Y +I C+ RV EA + + EM G P + F+T + C+QG + +A
Sbjct: 525 CLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAF 584
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++++E + +G Y+ LI+ L + L+ +M +GI P+ T+N+++
Sbjct: 585 RVLKEMEK---KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 492 ICLSQ 496
CLS+
Sbjct: 642 SCLSE 646
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 187/448 (41%), Gaps = 58/448 (12%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N+ P+L +N ++ L K + M SGV D TY+ L+ G C ++ +
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEA 420
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICA 156
+L M G PN N L+HSL K G+ A L+ M E ++VT + +I
Sbjct: 421 NYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480
Query: 157 YCKEENLVNALVLLEKSFSFG----------FV-------------PDVVTITKVLELLC 193
CK NL A+ ++ ++ G F+ PD +T ++ LC
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540
Query: 194 SVGRVMDAVE-ILEESGEQ---------------GRLGKVKGGCRFLKEMERKGCLPNVD 237
VGRV +A + +LE G++ + GK+ R LKEME+KGC ++
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLR 600
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN LI + + ++MK GI N TY+ +I L GG++ D +L M
Sbjct: 601 TYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEM 660
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK-------QMEKLFPRAVDRSLKILG 350
++G I + ++ ++ A E + E L+ + L
Sbjct: 661 --LQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELL---- 714
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
G AK F+ ++ +Y LI C++ ++ +AS ++ +M Y
Sbjct: 715 --AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFD 772
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDM 438
++F V+ L ++G+ A + E M
Sbjct: 773 PASFMPVIDELGKRGSKHAADEFAERMM 800
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 34/293 (11%)
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+L+R L G +++ + + + D IS YN + +E++ D + K M
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145
Query: 336 --KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
K+ P+ +L I C G +E+A+ FD+M E+G PN L+ YC+
Sbjct: 146 VAKVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+L+ EM G LP +NTV+S LC +G A KLVE+ MR +G P ++
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEK-MREVGLS--PDIVTFN 262
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGIL----PDYLTWNSLL------------------ 491
I ALC+ G AS + M + P+ +T+N +L
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDS 322
Query: 492 ------ICLSQQTTWLL-LLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
+ L W+L L+ +++ ++++E++ K + L S N L HG
Sbjct: 323 MKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 220/446 (49%), Gaps = 63/446 (14%)
Query: 50 NSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N +L LVKE I + + Y K+M+ + + T+ +++ GLC + ++ MK
Sbjct: 198 NPMLVSLVKEGRIGVVESVY-KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLV 164
+ G P+ + YNT+I CK GK+ +A +L+ +M PN++TF+ILI +C++EN+
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVT 316
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A + E+ G P+VVT ++ LCS G++ +A+ + +
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQD------------------ 358
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M G PNV TYN LI+ +C+ +L A ++ +D+ G++ N +T++TLI
Sbjct: 359 -KMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR+DD + +M D+ G +S YN ++ G RE
Sbjct: 418 GRMDDAFLLRSMMLDT--GVCPNVSTYNCLIVGFCRE----------------------- 452
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
GNV++A++ +M G ++V Y+ L+ A C++ R+A L+ EM
Sbjct: 453 ----------GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFE 502
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T+N ++ G R+GN AL V M GR + Y+ LIK C KG
Sbjct: 503 VGLNPSHLTYNALIDGYFREGNSTAALN-VRTLMEKKGRRA--NIVTYNVLIKGFCNKGK 559
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSL 490
+ A+ LL +M+ KG++P+ T++ L
Sbjct: 560 LEEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 183/379 (48%), Gaps = 35/379 (9%)
Query: 14 FITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
F VI GL G+ + DVV+ + + +PS+ +N+I+D K K
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVED---MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+A + ++ T+ IL+ G C V K+ M+ +G++PN V YN+LI+ LC NG
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+ A L M +PN VT++ LI +CK++ L A +L+ G P+V+T
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME-RKGCLPNVDTYNILISS 245
+++ GR+ DA L+ M G PNV TYN LI
Sbjct: 409 TLIDAYGKAGRMDDAF--------------------LLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C G + A + +M+ +G+ + VTY+ L+ LC G +++L M + G
Sbjct: 449 FCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEV--GLN 506
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRC 363
YN+++ G +RE AL MEK RA V ++ I GFC G +E+A R
Sbjct: 507 PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 566
Query: 364 FDQMIEEGGVPNVVIYDCL 382
++M+E+G +PN YD L
Sbjct: 567 LNEMLEKGLIPNRTTYDIL 585
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 133/262 (50%), Gaps = 11/262 (4%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N ++ S + G + V+ +M I N VT+D +I GLC G+ K ++ED
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ---KAGDVVED 254
Query: 300 SKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
K G + YN+++ G + + +A LK+M +++ P + ++ I GFC D N
Sbjct: 255 MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDEN 314
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V AK+ F++M +G PNVV Y+ LI+ C ++ EA L +M+G G P T+N
Sbjct: 315 VTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNA 374
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++G C++ LK E + IG RG P ++ LI A + G A +L M
Sbjct: 375 LINGFCKK----KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430
Query: 476 VGKGILPDYLTWNSLLICLSQQ 497
+ G+ P+ T+N L++ ++
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCRE 452
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 22/302 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E F +I G R + K + + R + P++ +NS+++ L +D A
Sbjct: 297 PNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGL 356
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G++ + TY L+ G C + + ++L + RG+ PN + +NTLI +
Sbjct: 357 -QDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYG 415
Query: 128 KNGKVGRA---RSLMSDMEE-PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A RS+M D PN T++ LI +C+E N+ A L ++ G D+V
Sbjct: 416 KAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ LC G AV +L+E E G R G M
Sbjct: 476 TYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLM 535
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E+KG N+ TYN+LI +C G L+ A + N+M G+ N TYD L + G I
Sbjct: 536 EKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595
Query: 288 DD 289
D
Sbjct: 596 PD 597
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 215/438 (49%), Gaps = 27/438 (6%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ + +Y I++ LC +V + +LL M R P+ V Y+T+I C G++ +A
Sbjct: 253 GISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKA 312
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
LM DM+ +PN T++ +I CK A +L + S +PD V T ++
Sbjct: 313 LKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHG 372
Query: 192 LCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPN 235
+G V A + +E + G+ GKV EM +G P+
Sbjct: 373 FFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPD 432
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TY LI YC+ G + +A + N+M G++ N VTY LI GLC G +D ++L
Sbjct: 433 EVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLD 492
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCV 353
M K+G + + YNS++ G+ + ++A++ +K+ME + P A+ + I +C
Sbjct: 493 EMR--KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G+++ A + +M++ G P VV ++ L++ +C + + L+ M G +P A T
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+NT++ C + ++ T K+ + R +G P S Y+ LIK C+ + A L
Sbjct: 611 YNTLMKQHCIRNSMNTTTKIYK---RMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYK 667
Query: 474 QMVGKGILPDYLTWNSLL 491
+M+ KG +P ++N+L+
Sbjct: 668 EMIEKGYVPTVTSYNALI 685
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 217/446 (48%), Gaps = 31/446 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G++ + YTY ++ LC + + K+L M S+ + P++V+Y TLIH K G
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V A +M P+ +T++ LI + + ++ L + S G PD VT T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++++ C G +++A + E M + G PN+ TY LI C
Sbjct: 439 LIDVYCKAGEMVNAFSLHNE-------------------MVQMGMTPNIVTYGALIDGLC 479
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G LD+A ++ ++M+ G+ N Y++++ G+C G I+ +K+++ ME + G
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA--GIDPD 537
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y +V+ R D+A + L++M L P V ++ + GFC+ G +ED R
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLG 597
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M+E+G VP+ + Y+ L+ +C + +++ K M G P ++T+N ++ G C+
Sbjct: 598 WMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKAR 657
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
N+ A L +E I +G +P Y+ LIK +K F A L +M G G++ D
Sbjct: 658 NLKEAWFLYKE---MIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGE 714
Query: 486 TWNSLL-ICLSQQTTWLLLLLLNEMV 510
+N + +C + + L L +E +
Sbjct: 715 IYNFFVDMCYEEGDVEITLNLCDEAI 740
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 213/452 (47%), Gaps = 24/452 (5%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S PD + TVI G + +K D + + P+ +NSI+ +L K
Sbjct: 289 STPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAE 348
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++MM+ + D+ Y L+ G V K M S+ + P+ + Y TLI
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+ GKV ++L +M +P++VT++ LI YCK +VNA L + G P++
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT +++ LC G + A E+L+E ++G + G ++ + +KE
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME G P+ TY +I +YC G +D A + +M G+ VT++ L+ G C G
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
++DG ++L M + +G YN+++ N + + K+M + + P +
Sbjct: 589 LEDGDRLLGWMLE--KGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTY 646
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ I G C N+++A + +MIE+G VP V Y+ LI + ++ + EA EL +EM G
Sbjct: 647 NILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG 706
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
HG + +N + +G+V L L +E
Sbjct: 707 HGLVADGEIYNFFVDMCYEEGDVEITLNLCDE 738
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 175/363 (48%), Gaps = 21/363 (5%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD-AVE 203
PN + F I + +L A LL+K S+G V V + L + + ++ A++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247
Query: 204 ILEESGEQG-------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ E G RLGKVK R L +M+ + P+V +Y+ +I YC G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
L AL + +DM+I G+ N TY+++I LC G+ + K+L+ M K +
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV-- 365
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y ++++G ++ A ++ +M +K+ P + + I GF G V + + F +MI
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+ V Y LI YC+ + A L EM G P T+ ++ GLC+ G +
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
TA +L++E MR +G Y+ ++ +C+ G + A L+ +M GI PD +T+
Sbjct: 486 TANELLDE-MR--KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 489 SLL 491
+++
Sbjct: 543 TVI 545
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 232/456 (50%), Gaps = 37/456 (8%)
Query: 49 FNSILDVL--VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
FNSIL L V++ +AR + + AS V+ D TY IL+ GLC RVGD ++L
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCAS-VRPDVVTYGILVNGLCKAGRVGDALRVLDG 197
Query: 107 MKSRG--VKPNSVIYNTLIHSLCKNGKVGRARSL----MSDME--EPNDVTFSILICAYC 158
M + ++P+ V NT++ LCK+G+V A + MS + PN VT++ LI A+C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ N+ A L+EK + G ++VT+ ++ LC GR A+E E GK
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGK-- 315
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
N TY+ L+ + T + A+++F++ +G S + + Y T+I
Sbjct: 316 ---------------GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GL GR++D + M+++ G K YN ++ G R+ + EA E L++M++
Sbjct: 361 SGLTQAGRLEDACSMASSMKEA--GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + + G C G+ +MI++G P+V+ + L+H YC+ ++ EA
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPL 455
+++ M G P +NT++ LC++G+V A++L +E + S+P + ++ L
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDE----MKEKSVPANVTTFNAL 534
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+K L +K + A L+ QM + PDY+T + L+
Sbjct: 535 LKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 189/401 (47%), Gaps = 30/401 (7%)
Query: 119 YNTLIHSLCKNGKV-GRAR--SLMSDME--EPNDVTFSILICAYCKEENLVNALVLLE-- 171
+N+++ +L + V G AR +LM P+ VT+ IL+ CK + +AL +L+
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
PDVVT+ V++ LC GRV +A+ +E+ R+ V G
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ-----RMSSVHG------------ 241
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PN TYN LI ++C G + A ++ M+ +G+ N VT +T++ GLC GR L
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKIL 349
+ + KG Y++++ L N A+E K E P A+ I
Sbjct: 302 EFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMIS 361
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G G +EDA M E G + Y+ LI +C+++R+ EA EL++EM G P
Sbjct: 362 GLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRP 421
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+NT+LSG C+ G+ +L+ + I G P + L+ C+ G A
Sbjct: 422 DVCTYNTLLSGSCKAGDFAAVDELLG---KMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEM 509
+L M GI P+ + +N+L+ L ++ L + L +EM
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 190/425 (44%), Gaps = 33/425 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKED-IDLAR 65
PD + ++ GL +A + D ++ D +SR ++ P + N+++D L K + A
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 66 AFYRKKMMA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF ++M + G + TY L+ C + ++L+ M++ GV N V NT++
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 125 SLCKNGKVGRARSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC+ G+ G A + + N VT+S L+ A N+ A+ L + S G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PD + ++ L GR+ DA C M+ G +
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDA-------------------CSMASSMKEAGFKLDTKA 390
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNILI+ +C L A ++ +MK GI + TY+TL+ G C G ++L M
Sbjct: 391 YNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
D +G + + + ++++G + + DEAL L+ M++ + P V + I C G+
Sbjct: 451 D--DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGD 508
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V+ A FD+M E+ NV ++ L+ + +A ELM +M P T +
Sbjct: 509 VDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDV 568
Query: 417 VLSGL 421
++ L
Sbjct: 569 LMEWL 573
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 26/241 (10%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G + D Y IL+ G C R+ + ++LL MK G++P+ YNTL+ CK G
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
L+ M +P+ +TF L+ YCK + AL +L G P+ V
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ LC G V A+E+ +E M+ K NV T+N L+
Sbjct: 499 LIDFLCKRGDVDLAIELFDE-------------------MKEKSVPANVTTFNALLKGLR 539
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ + + A ++ + M+ + ++VT D L+ L G D ++ + M+ + + R
Sbjct: 540 DKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETD---RLKRFMQQGEHTASKR 596
Query: 308 I 308
I
Sbjct: 597 I 597
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 5/206 (2%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I G R + +++ + + + P + +N++L K A
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
KM+ G Q T+ L+ G C ++ + ++L M G+ PN+VIYNTLI LCK
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G V A L +M+E N TF+ L+ + A L+++ PD VT+
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTV 566
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQ 211
++E L +G D ++ + GE
Sbjct: 567 DVLMEWLPVIGET-DRLKRFMQQGEH 591
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 254/546 (46%), Gaps = 65/546 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL ++R N+ D +S + P++ ++ +++D ++E + AF
Sbjct: 290 PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG-NADEAFK 348
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVG----------------------------- 98
K+M+A+GVQ + TY L++GLC ++
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408
Query: 99 ------DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
D F+LL M++ G+ PN Y+ +IH LC++G+ +A L+ +M +PN
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI YC+E N+ A + +K +PD+ ++ L VGRV ++ + +
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528
Query: 209 GEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G L G ++ + ++ M G PN Y L+ SY ++ +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ F M G+ + Y LI L S G ++ ++L +E K GS + Y+
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE--KNGSVPDVHVYS 646
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ GL + +++A L +M K + P V + I G C G++ A+ F+ ++ +
Sbjct: 647 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 706
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G VPN V Y LI C+ + A L EM G P A ++ + +G G++ A
Sbjct: 707 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 766
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ L+EE M G S+ ++ L+ C++G Q LL ++G+G++P+ LT ++
Sbjct: 767 MFLIEE-MFLRGHASI---SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENI 822
Query: 491 LICLSQ 496
+ LS+
Sbjct: 823 ISGLSE 828
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 221/459 (48%), Gaps = 39/459 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G + TY +L+ GLC + V + F M+ G+ P+ Y LI+ LCK+
Sbjct: 247 EMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSR 306
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A++L+ +M +PN V ++ LI + +E N A ++++ + G P+ +T
Sbjct: 307 RSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYD 366
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC +G++ A +L++ R K R L EME
Sbjct: 367 NLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENA 426
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PNV TY+I+I C++G + A D+ +M G+ N Y LI G C G +
Sbjct: 427 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486
Query: 291 LKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+I M +K + P YNS+++GL + + +E+ +Y QM++ L P
Sbjct: 487 CEIFDKM------TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTY 540
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S I G+ +G++E A++ +M++ G PN VIY L+ +Y + + + + S K M
Sbjct: 541 SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLD 600
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKG 463
G + + ++ L GN+ A ++ + GI + GS+P YS LI LC+
Sbjct: 601 QGVMLDNRIYGILIHNLSSSGNMEAAFRV----LSGIEKNGSVPDVHVYSSLISGLCKTA 656
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTW 500
+ A +L +M KG+ P+ + +N+L+ +C S ++
Sbjct: 657 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISY 695
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 203/490 (41%), Gaps = 59/490 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R D + + ++P++ ++ ++ L + +
Sbjct: 395 PDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDL 454
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G++ + + YA L+ G C V ++ M V P+ YN+LI L K
Sbjct: 455 LEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V + + M+E PN+ T+S LI Y K +L +A L+++ G P+ V
Sbjct: 515 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVI 574
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEME 228
+LE + + +QG + G ++ R L +E
Sbjct: 575 YIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIE 634
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G +P+V Y+ LIS C+T + A + ++M G+ N V Y+ LI GLC G I
Sbjct: 635 KNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDIS 694
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ +NS+L + L P V + I
Sbjct: 695 YARNV-----------------FNSIL------------------AKGLVPNCVTYTSLI 719
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G++ +A +++M+ G P+ +Y L + +A L++EM G+
Sbjct: 720 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 779
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
I S+FN ++ G C++G + LKL+ M GRG +P + +I L E G
Sbjct: 780 SI-SSFNNLVDGFCKRGKMQETLKLLHVIM---GRGLVPNALTIENIISGLSEAGKLSEV 835
Query: 469 SMLLVQMVGK 478
+ V++ K
Sbjct: 836 HTIFVELQQK 845
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 151/322 (46%), Gaps = 23/322 (7%)
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
LE C V A ++L E E+G R G V+ F K+ME G
Sbjct: 228 ALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 287
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
+P+ TY LI+ C++ + A + ++M + N V Y LI G G D+
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K+++ M + G + Y++++ GL + Q D A LKQM + P + +L I
Sbjct: 348 KMIKEMVAA--GVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIE 405
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G + +DA R +M G PNV Y +IH CQ +AS+L++EMT G P
Sbjct: 406 GHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKP 465
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
A + ++SG CR+GNV A ++ ++ + LP Y+ LI L + G + ++
Sbjct: 466 NAFVYAPLISGYCREGNVSLACEIFDKMTK---VNVLPDLYCYNSLIFGLSKVGRVEEST 522
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
QM +G+LP+ T++ L+
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLI 544
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 219/522 (41%), Gaps = 64/522 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKE-DIDLA 64
P+ + +I GL ++ + KA+DL+ + P+ ++ ++ +E ++ LA
Sbjct: 430 PNVYTYSIMIHGLCQS---GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 486
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ KM V D Y Y L+ GL RV + K M+ RG+ PN Y+ LIH
Sbjct: 487 CEIF-DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIH 545
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
KNG + A L+ M + PNDV + L+ +Y K +++ + G +
Sbjct: 546 GYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVML 605
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FL 224
D ++ L S G + A +L + G + V G C+ L
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 665
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM +KG PN+ YN LI C++G + A +VFN + G+ N VTY +LI G C
Sbjct: 666 DEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKV 725
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
G I + + M + I+P Y+ + G ++A+ +++M L
Sbjct: 726 GDISNAFYLYNEMLATG------ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGH 778
Query: 341 AVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ---------- 388
A S L GFC G +++ + ++ G VPN + + +I +
Sbjct: 779 ASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 838
Query: 389 ---------EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
E R S L +M G +P+ + ++ C++GN+ AL L +
Sbjct: 839 FVELQQKTSESAARHFSSLFMDMINQGKIPL-DVVDDMIRDHCKEGNLDKALMLRDVI-- 895
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ + + G Y ++ LC KG A LL +M +G L
Sbjct: 896 -VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNL 936
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 146/317 (46%), Gaps = 11/317 (3%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
S PD ++ ++I GL + D +S+ + P++ +N+++D L K DI AR
Sbjct: 638 SVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYAR 697
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ ++A G+ + TY L+ G C + + F L + M + G+ P++ +Y+ L
Sbjct: 698 NVF-NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756
Query: 126 LCKNGKVGRARSLMSDM---EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G + +A L+ +M + +F+ L+ +CK + L LL G VP+
Sbjct: 757 CSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNA 816
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+TI ++ L G++ + I E ++ + +M +G +P +D + +
Sbjct: 817 LTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIP-LDVVDDM 875
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +C+ G LD AL + + + +Y ++ LC G++ + L +L+ M+
Sbjct: 876 IRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD---- 931
Query: 303 GSKGRISPYNSVLYGLY 319
+G + P L G++
Sbjct: 932 -KRGNLQPTLVALLGIF 947
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 247/571 (43%), Gaps = 107/571 (18%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
+++GL I D++ R +P+L F+++++V KE +D A + Y M+
Sbjct: 246 ILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLY-NLMIEK 304
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK---------------------- 113
G+ D Y+IL+ GL ++ +G L + +RGVK
Sbjct: 305 GIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKA 364
Query: 114 -------------PNSVIYNTLIHSLCKNGKV----GRARSLMSDMEEPNDVTFSILICA 156
PN V Y+ LI+ LC+NG+V G ++ EP+ +T+S LI
Sbjct: 365 IEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDG 424
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---- 212
+CK ENL + L G VPDVV + ++ L G + +A+ ++ ++G
Sbjct: 425 FCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLN 484
Query: 213 ------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
RL + + G + M +P+V TY +L+ E G LD AL +F
Sbjct: 485 NYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFF 544
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+ G S + + Y TLI G C GL+I +LM+ + G I YN ++ +R
Sbjct: 545 QLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN--GIFPDICIYNVLINMFFR 602
Query: 321 ENQQDEALEYLKQMEK----------------------------LF---------PRAVD 343
E + LE L+++ K LF P A+
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I +C DG ++DA F M+E G PN++ Y CLI Y + E A EL ++M
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR----GIGRGSLPGSGHYSPLIKAL 459
G P +++ ++ GLC++G L+EE IGR LP Y LI+
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKG-------LMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
C+ G A ML M+ GI+PD L +L
Sbjct: 776 CKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 210/495 (42%), Gaps = 40/495 (8%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDD 81
R M++ V +S+ ++ S + +LD+L+ D ID+ Y + GV
Sbjct: 152 RNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGV---- 207
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
Y + V G + RG+ P V N ++ LC ++G A
Sbjct: 208 --YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265
Query: 142 M----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M PN VTFS LI YCKE L A L G VPD+V + ++ L G+
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325
Query: 198 VMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ + + + +G R+G + M ++G PNV TY+I
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI+ C G + A VF + G+ + +TY +LI G C + DG + +M +
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM--LR 443
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG-----N 356
+G + + ++ GL R+ DEAL + Q K R + + + +DG
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK---RGLTLNNYLFNALIDGCFRLKR 500
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
D + + M +P+VV Y L+ ++ R+ EA L ++ G+ P + T
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G C++ + T L++ + G P Y+ LI +G ++ LL +++
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQ---SNGIFPDICIYNVLINMFFREGCVENVLELLREII 617
Query: 477 GKGILPDYLTWNSLL 491
G+ PD +T+N+++
Sbjct: 618 KYGLEPDIVTYNTMI 632
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 196/454 (43%), Gaps = 92/454 (20%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGR------------------ARSLMSDMEEPNDV 148
++ G P S +Y+ L+H C+NG V R A S M D+ +D
Sbjct: 132 FRNYGSNP-STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSD- 189
Query: 149 TFSILICAY---CK----EENLVNALVL---LEKSFSF-------GFVPDVVTITKVLEL 191
+++ Y CK E + N+ + +EK +F G VP +V K+L+
Sbjct: 190 RIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC ++ A + F M R G PN+ T++ LI+ YC+
Sbjct: 250 LCMGNQIGVASD-------------------FFDMMVRSGPSPNLVTFSTLINVYCKELR 290
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A ++N M GI + V Y LI GL G++++G + + G K + +
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA--LARGVKMDVVIF 348
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+S++ R +A+E +M E + P V S+ I G C +G V +A F Q+++
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G P+V+ Y LI +C+ E +R+ L M G++P + +++GL RQG +
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468
Query: 430 ALKLVEEDM-RGIGRGS-------------------------------LPGSGHYSPLIK 457
AL+ + + RG+ + +P Y+ L+K
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVK 528
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L E+G A L Q++ KG PD++ + +L+
Sbjct: 529 GLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 177/397 (44%), Gaps = 39/397 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
PD + +I GL R M+++ ++ + +T + +FN+++D +K D +
Sbjct: 448 PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKM 507
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M V D TY +L+KGL R+ + L + +G P+ +IY TLI
Sbjct: 508 YILMGMYK--VIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK + M+ P+ +++LI + +E + N L LL + +G PD+
Sbjct: 566 CKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDI 625
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT ++ CS+ A+++ E + G+ + PN T+ IL
Sbjct: 626 VTYNTMICGYCSLKIFSKAIKLFEVL----KCGRTQ---------------PNAITFTIL 666
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +YC+ G +D A+ +F+ M G N +TY LI G + ++ + M
Sbjct: 667 IDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGD-- 724
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEA-LEYLKQMEK-LFPRAVDRSLKILGFCVDGN 356
R+SP Y+ ++ GL ++ +EA L + + + L P + + I G+C G
Sbjct: 725 ----RVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGR 780
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ +A +D M+ G +P+ ++ L Q+ + +
Sbjct: 781 LAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAK 817
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 42/314 (13%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G+ G ++ F G P+ Y+ L+ YC G++D A+D F M G+S +
Sbjct: 117 GQFGNLEVLGEFHGSFRNYGSNPST-VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISH 175
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
++ L RID ++E+ +E KG + Y V + + ++ L +
Sbjct: 176 YAASEMLDLLIDSDRID------VILENYEEMCKG-LGVYEFVFNSFLKRGEVEKGLNFH 228
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ + + L P+ VD + + G C+ + A FD M+ G PN+V + LI+ YC+E
Sbjct: 229 RALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN----------------------- 426
R+ EA L M G +P ++ +++GL R G
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348
Query: 427 ---------VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
VG K +E R + G P YS LI LC G A + Q++
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408
Query: 478 KGILPDYLTWNSLL 491
+G+ P LT++SL+
Sbjct: 409 QGLEPSVLTYSSLI 422
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 208/440 (47%), Gaps = 26/440 (5%)
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G + D T L+KG+ + N + D +L M +G+ ++ Y LI+ LCK K
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
Query: 133 GRARSLMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
G A L M+ + + T+ ++I A CK+ AL + + G +PDVV + ++
Sbjct: 1068 GLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
+ LC GR+ +A+E +E +G R G K FL M +G
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+ T+ ILI C+ G + A + M+ G + +TY+TL+ GLC G+++D K+
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
+ + D G K + YN ++ G ++ + DEA + ++M L P V + I
Sbjct: 1248 FESLAD--RGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G V A++ F +M G + Y L+ C+ + EA +L + + + P
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNI 1365
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
F+ +L G+CR G + A K +E + G P + Y+ LI LC KG A L
Sbjct: 1366 EVFSILLDGMCRAGKLEEAWKQFDEISKN---GLEPDTIAYNILINGLCNKGMLSEAVKL 1422
Query: 472 LVQMVGKGILPDYLTWNSLL 491
L QM KG LPD +T+N ++
Sbjct: 1423 LWQMEEKGCLPDSITFNVII 1442
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 213/433 (49%), Gaps = 28/433 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I GL +AR +K + + + N + + I+D L K+ +
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKDGMTTEALDMF 1108
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M+ +G+ D Y+ LM GLC R+ + + M+ RG+ + YN+LIH L +
Sbjct: 1109 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 1168
Query: 130 G---KVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G +V +LM D P+ TF+ILI CKE + A +LE G PD++T
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTY 1228
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ LC VG++ DA ++ E + +G NV +YNILI+
Sbjct: 1229 NTLMNGLCLVGQLEDATKLFESLAD-------------------RGIKLNVFSYNILING 1269
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC+ +D A F +M+ G+ + VTY+TLI LC GR+ K+ M+ G
Sbjct: 1270 YCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC--GQF 1327
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
++S Y +L GL + +EA++ + ++K + IL G C G +E+A +
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 1387
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
FD++ + G P+ + Y+ LI+ C + + EA +L+ +M G LP + TFN ++ L +
Sbjct: 1388 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 1447
Query: 424 QGNVGTALKLVEE 436
+ + A++L+EE
Sbjct: 1448 ENEIHEAIQLLEE 1460
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 173/346 (50%), Gaps = 22/346 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD ++ +++ GL R + + ++ + ++ + +NS++ L + + ++
Sbjct: 1118 PDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWF 1177
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ G D +T+ IL+ GLC +VG+ ++L +M+ +G +P+ + YNTL++ LC
Sbjct: 1178 LNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCL 1237
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A L + + N +++ILI YCK++ + A E+ G P VT
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL----------- 233
++ LC GRV A ++ E G+ K+ C L + + G L
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 234 -----PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
PN++ ++IL+ C G L+ A F+++ +G+ + + Y+ LI GLC+ G +
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ +K+L ME+ +G +N ++ L +EN+ EA++ L++M
Sbjct: 1418 EAVKLLWQMEE--KGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 1461
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 180/421 (42%), Gaps = 59/421 (14%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFS 151
++ D KL P + +N L+ S+ K G + + +P+ T +
Sbjct: 926 KLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLN 985
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
ILI C + + GF PD VT+T +++ + + DAV++ +E ++
Sbjct: 986 ILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKK 1045
Query: 212 GRLGKVK-------GGCRF--------LKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
G LG K G C+ L E + C +V TY ++I + C+ G+ AL
Sbjct: 1046 GLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEAL 1105
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
D+F++M GI + V Y +L+ GLC GR+ + L+ + ME G + YNS+++
Sbjct: 1106 DMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG--RGISADVYTYNSLIH 1163
Query: 317 GLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
GL R E +L + M++ G P+
Sbjct: 1164 GLSRAGLWKEVTWFL---------------------------------NLMVDRGFSPDA 1190
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ LI C+E +V EA ++++ M G P T+NT+++GLC G + A KL E
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 1250
Query: 437 DM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
RGI Y+ LI C+ A +M KG+ P +T+N+L+ L
Sbjct: 1251 LADRGIKLNVF----SYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALC 1306
Query: 496 Q 496
Q
Sbjct: 1307 Q 1307
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 146/297 (49%), Gaps = 27/297 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
PD F +I GL + + + + +L+ P + +N++++ LV + D +
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + + G++ + ++Y IL+ G C ++ + F+ M+ +G+KP++V YNTLI +L
Sbjct: 1248 F--ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGAL 1305
Query: 127 CKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C++G+V A+ L +M+ T+ +L+ CK +L A+ L + P++
Sbjct: 1306 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNI 1365
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ +L+ +C G+ LEE+ +Q E+ + G P+ YNIL
Sbjct: 1366 EVFSILLDGMCRAGK-------LEEAWKQ------------FDEISKNGLEPDTIAYNIL 1406
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
I+ C G+L A+ + M+ G + +T++ +I+ L I + +++L+ M +
Sbjct: 1407 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 1463
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 125/311 (40%), Gaps = 55/311 (17%)
Query: 217 VKGGCRF--------LKEMERKGC---LPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
V+ CRF +K +R C +P DT+N L++S + G + ++ +
Sbjct: 916 VRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDV 975
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
GI + T + LI CS R
Sbjct: 976 GIQPDLYTLNILIHCCCS-----------------------------------LRAVGCG 1000
Query: 326 EALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+ P AV + + G ++ + DA + FD+M ++G + + Y LI+
Sbjct: 1001 FGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILING 1060
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ + A +L ++M G+ + T+ ++ LC+ G AL + E IG G
Sbjct: 1061 LCKARKTGLAIKLHEKMKGNCKGDVF-TYGMIIDALCKDGMTTEALDMFSE---MIGAGI 1116
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS-----QQTTW 500
LP YS L+ LC G + A +M G+GI D T+NSL+ LS ++ TW
Sbjct: 1117 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 1176
Query: 501 LLLLLLNEMVS 511
L L+++ S
Sbjct: 1177 FLNLMVDRGFS 1187
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
++IL+ G+C ++ + +K + G++P+++ YN LI+ LC G + A L+ ME
Sbjct: 1368 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 1427
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
E P+ +TF+++I KE + A+ LLE+ + F PD + +L
Sbjct: 1428 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR-K 70
S + ++ GL + + + + + + P++++F+ +LD + + L A+ +
Sbjct: 1331 STYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAG-KLEEAWKQFD 1389
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ +G++ D Y IL+ GLC + + KLL M+ +G P+S+ +N +I +L K
Sbjct: 1390 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 1449
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
++ A L+ +M P++ S+L+C + ALV L + G
Sbjct: 1450 EIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 1500
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 206/424 (48%), Gaps = 32/424 (7%)
Query: 81 DYTYAILMKGL---CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
D+ LMK L C + + L M +G P+ ++ LI + +G+A
Sbjct: 66 DFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATR 125
Query: 138 LMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+M +E +P+ ++ LI + K L NA +L++ S GF+PDVVT ++ CS
Sbjct: 126 VMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCS 185
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G++ A+EI EE + + C P V TY ILI + G +D
Sbjct: 186 RGKLDLALEIFEE-------------------LLKDNCEPTVITYTILIEATILDGGIDV 226
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+ + ++M G+ + +TY+ +IRG+C +D ++L+ + S G K I YN +
Sbjct: 227 AMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSL--SSRGCKPDIITYNIL 284
Query: 315 LYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
L L + E + + +M + P V S+ I C DG VE+A M E+G
Sbjct: 285 LRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGL 344
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P+ YD LI +C+E R+ A+E ++ M G LP +NT+++GLCR G AL+
Sbjct: 345 KPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE 404
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ E + G P Y+ L AL G A ++++++ +GI PD +T+NSL+
Sbjct: 405 VFE---KLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLIS 461
Query: 493 CLSQ 496
CL +
Sbjct: 462 CLCR 465
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 197/416 (47%), Gaps = 30/416 (7%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA-- 135
+ D + Y L+ G N++ + ++L MKSRG P+ V YN +I S C GK+ A
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 136 --RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
L+ D EP +T++ILI A + + A+ LL++ S G PD +T ++ +C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
V A E+L + + +GC P++ TYNIL+ + G
Sbjct: 255 KEMMVDKAFELL-------------------RSLSSRGCKPDIITYNILLRTLLSRGKWS 295
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+ ++M G N VT+ LI LC G++++ + +L+ M++ +G K Y+
Sbjct: 296 EGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKE--KGLKPDAYCYDP 353
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G RE + D A E+L+ M + P V+ + + G C G + A F+++ E G
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PNV Y+ L A A E++ ++ G P T+N+++S LCR G V A+
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+L+ + G R P Y+ ++ LC+ A +L M KG P+ T+
Sbjct: 474 ELLVDMQSGRYR---PNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTY 526
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 191/420 (45%), Gaps = 28/420 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + +I G +A + + + D + P + +N ++ + +DLA
Sbjct: 136 PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEI 195
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++++ + TY IL++ L + KLL M S+G++P+++ YN +I +C
Sbjct: 196 F-EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V +A RSL S +P+ +T++IL+ L+ + S G P+VV
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + ++ LC G+V +AV +L E+G R G++ FL+ M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GCLP++ YN +++ C TG D AL+VF + G N +Y+TL L S G
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434
Query: 288 DDGLK-ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
L+ IL+L+ +G YNS++ L R+ DEA+E L M+ + P V
Sbjct: 435 YRALEMILKLL---NQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ +LG C DA M E+G PN Y LI EA EL + G
Sbjct: 492 NIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHG 551
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
L+ C G+ ++ L L+ M D +G + ++ G + +A ++ +E+
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVD--KGYTPDVILCTKLIKGFFNSRNIGKATRVMEILER 132
Query: 337 L-FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P + I GF +E+A R D+M G +P+VV Y+ +I ++C ++ A
Sbjct: 133 YGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
E+ +E+ P T+ ++ G + A+KL++E + +G P + Y+ +
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDE---MLSKGLEPDTLTYNAI 249
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
I+ +C++ A LL + +G PD +T+N LL L + W
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKW 294
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 24/154 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKED---- 60
PP+ S + T+ L + D +A +++ + + P +NS++ L ++
Sbjct: 415 PPNVSSYNTLFSALWSS---GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471
Query: 61 -----IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
+D+ YR ++ +Y I++ GLC NR D ++L M +G +PN
Sbjct: 472 AIELLVDMQSGRYRPNVV---------SYNIILLGLCKVNRANDAIEVLAAMTEKGCQPN 522
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVT 149
Y LI + +G A L + + N ++
Sbjct: 523 ETTYILLIEGIGFSGLRAEAMELANSLHGMNAIS 556
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 239/538 (44%), Gaps = 62/538 (11%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE----- 59
+ PP+ F V+RGL I D ++ D +S P +++ IL+ +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 60 DIDLARAFYRK------------------------------KMMASGVQGDDYTYAILMK 89
+ + A + K K+ G + D +Y ++K
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
GLC+ R GD +L+ M PN V +NTLI LC+NG R +++ M E P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ ++ +I CKE +L A +L + S+G P+VV VL+ LCS R +A E+L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 206 EESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
E ++ + G V L++M GC+P+V TY +I+ +C+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G++D A+ + M G N V+Y +++GLCS GR D +++ M ++G
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM--IQQGCPPNPV 462
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+N+++ L ++ ++A+E LKQM P + S I G G E+A + M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ +G PN +IY + A +E RV + ++ + A +N V+S LC++
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A+ + G +P Y+ LIK L +G + A LL ++ +G L +L
Sbjct: 583 DRAIDFFA---YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 212/442 (47%), Gaps = 31/442 (7%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V + YT+ +++GLC R+ D ++L M +G P +Y+ ++ + C++G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ M + ++++ A C++ + A+ LL K FG D+V+ VL+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C R D E+++ EM R C PN+ T+N LI C G+
Sbjct: 227 CMAKRWGDVEELMD-------------------EMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ +V M G + + Y T+I G+C G ++ +IL M G K + YN
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY--GLKPNVVCYN 325
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEE 370
+VL GL + EA E L +M + D + IL FC +G V+ +QM+
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +P+V+ Y +I+ +C+E + EA L+K M+ G P ++ VL GLC G A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+ + I +G P ++ LI LC+KG + A LL QM+ G PD ++++++
Sbjct: 446 EELMSQ---MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 491 LICLSQQ-TTWLLLLLLNEMVS 511
+ L + T L LLN MV+
Sbjct: 503 IDGLGKAGKTEEALELLNVMVN 524
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 52/347 (14%)
Query: 192 LCSVGRVMDAVEILEESGEQGRL----GKVKGGCR------------------------- 222
LCS GR +A L ++G+ + V G CR
Sbjct: 57 LCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP 116
Query: 223 ----------------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
L EM KGC P Y++++ + C +G +++ V M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + + ++ +C G +D+ + +L+ + + G + I YN+VL GL + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKL--AFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 327 ALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
E + +M ++ P V + I C +G E QM E G P++ +Y +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
C+E + A+E++ M +G P +NTVL GLC A +L+ E + +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ---KD 351
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ L+ C+ G LL QM+ G +PD +T+ +++
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 239/538 (44%), Gaps = 62/538 (11%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE----- 59
+ PP+ F V+RGL I D ++ D +S P +++ IL+ +
Sbjct: 105 VPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 60 DIDLARAFYRK------------------------------KMMASGVQGDDYTYAILMK 89
+ + A + K K+ G + D +Y ++K
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
GLC+ R GD +L+ M PN V +NTLI LC+NG R +++ M E P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ ++ +I CKE +L A +L + S+G P+VV VL+ LCS R +A E+L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 206 EESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
E ++ + G V L++M GC+P+V TY +I+ +C+
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G++D A+ + M G N V+Y +++GLCS GR D +++ M ++G
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM--IQQGCPPNPV 462
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+N+++ L ++ ++A+E LKQM P + S I G G E+A + M
Sbjct: 463 TFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 522
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ +G PN +IY + A +E RV + ++ + A +N V+S LC++
Sbjct: 523 VNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWET 582
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A+ + G +P Y+ LIK L +G + A LL ++ +G L +L
Sbjct: 583 DRAIDFFA---YMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHL 637
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 212/442 (47%), Gaps = 31/442 (7%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V + YT+ +++GLC R+ D ++L M +G P +Y+ ++ + C++G +
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ M + ++++ A C++ + A+ LL K FG D+V+ VL+ L
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C R D E+++ EM R C PN+ T+N LI C G+
Sbjct: 227 CMAKRWGDVEELMD-------------------EMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ +V M G + + Y T+I G+C G ++ +IL M G K + YN
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY--GLKPNVVCYN 325
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEE 370
+VL GL + EA E L +M + D + IL FC +G V+ +QM+
Sbjct: 326 TVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSH 385
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +P+V+ Y +I+ +C+E + EA L+K M+ G P ++ VL GLC G A
Sbjct: 386 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDA 445
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+ + I +G P ++ LI LC+KG + A LL QM+ G PD ++++++
Sbjct: 446 EELMSQ---MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 491 LICLSQQ-TTWLLLLLLNEMVS 511
+ L + T L LLN MV+
Sbjct: 503 IDGLGKAGKTEEALELLNVMVN 524
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 143/347 (41%), Gaps = 52/347 (14%)
Query: 192 LCSVGRVMDAVEILEESGEQGRL----GKVKGGCR------------------------- 222
LCS GR +A L ++G+ + V G CR
Sbjct: 57 LCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFP 116
Query: 223 ----------------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
L EM KGC P Y++++ + C +G +++ V M G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + + ++ +C G +D+ + +L+ + + G + I YN+VL GL + +
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKL--AFFGCEADIVSYNAVLKGLCMAKRWGD 234
Query: 327 ALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
E + +M ++ P V + I C +G E QM E G P++ +Y +I
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
C+E + A+E++ M +G P +NTVL GLC A +L+ E + +
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQ---KD 351
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ L+ C+ G LL QM+ G +PD +T+ +++
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVI 398
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 140/541 (25%), Positives = 244/541 (45%), Gaps = 56/541 (10%)
Query: 28 NDVVKATDLVSRF-NMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYA 85
N + + L RF + P + +N + +KE +D Y K M + V+ YT+
Sbjct: 99 NAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLY-KDMAVARVKPQTYTFN 157
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
+L+ LC + + ++ M +G KPN L+ C+ G L+ +M
Sbjct: 158 LLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSS 217
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN V ++ +I + C E V A L+EK G PD+VT + LC G++++A
Sbjct: 218 GALPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEA 277
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
I + +G K PN TYN+++ +C G+ + A +F+
Sbjct: 278 SRIFRDMQIDEEMGLPK---------------PNTVTYNLMLEGFCSEGMFEEARAIFDS 322
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
MK + + + +Y+ + GL G++ + IL M +++ K + YN +++GL +
Sbjct: 323 MK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEM--AEKNIKPNLYSYNILVHGLCKY 379
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+A L M + + P V S + G+C G + +A +MI+ G PN+
Sbjct: 380 GMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTC 439
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--- 436
+ L+H+ +E R EA +L++ M GY T NT+++GLC+ GN+ A+++V
Sbjct: 440 NILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWT 499
Query: 437 -----------------DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
D+R G+ LP S Y+ +I LC+ G A L++M+GK
Sbjct: 500 RGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKK 559
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAG 539
+ PD L +++ + +Q ++ S V+ E+ K LR+ N L G G
Sbjct: 560 LSPDSLIFDTFIYNYCKQ---------GKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLG 610
Query: 540 S 540
S
Sbjct: 611 S 611
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/545 (26%), Positives = 241/545 (44%), Gaps = 58/545 (10%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
PH PP S + + R + ++ V+ ++ + P FN ++ L +
Sbjct: 111 FPHD---PPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMG 167
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++ AR + KM G + ++++ IL++G C G LL M+S G PN V Y
Sbjct: 168 YLENAREVF-DKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAY 226
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL---LEK 172
NT+I SLC G+ A L+ M E P+ VTF+ I A CK ++ A + ++
Sbjct: 227 NTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQI 286
Query: 173 SFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGK 216
G P+ VT +LE CS G +A I + R GK
Sbjct: 287 DEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGK 346
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
+ L EM K PN+ +YNIL+ C+ G+ A + M+ G++ + VTY T
Sbjct: 347 LLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYST 406
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-E 335
L+ G C G+I + +L+ M + G + N +L+ L++E + EA + L+ M E
Sbjct: 407 LLHGYCRRGKILEANYVLREM--IQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNE 464
Query: 336 KLFP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG---------------------- 372
+ + V + I G C GN++ A M G
Sbjct: 465 RGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKK 524
Query: 373 -VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+P+ + Y +I C+ RV EA + + EM G P + F+T + C+QG + +A
Sbjct: 525 CLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAF 584
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++++E + +G Y+ LI+ L + L+ +M +GI P+ T+N+++
Sbjct: 585 RVLKEMEK---KGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNII 641
Query: 492 ICLSQ 496
CLS+
Sbjct: 642 SCLSE 646
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 187/448 (41%), Gaps = 58/448 (12%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N+ P+L +N ++ L K + M SGV D TY+ L+ G C ++ +
Sbjct: 361 NIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEA 420
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICA 156
+L M G PN N L+HSL K G+ A L+ M E ++VT + +I
Sbjct: 421 NYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMING 480
Query: 157 YCKEENLVNALVLLEKSFSFG----------FV-------------PDVVTITKVLELLC 193
CK NL A+ ++ ++ G F+ PD +T ++ LC
Sbjct: 481 LCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLC 540
Query: 194 SVGRVMDAVE-ILEESGEQ---------------GRLGKVKGGCRFLKEMERKGCLPNVD 237
VGRV +A + +LE G++ + GK+ R LKEME+KGC ++
Sbjct: 541 KVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLR 600
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN LI + + ++MK GI N TY+ +I L GG++ D +L M
Sbjct: 601 TYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEM 660
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK-------QMEKLFPRAVDRSLKILG 350
++G I + ++ ++ A E + E L+ + L
Sbjct: 661 --LQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELL---- 714
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
G AK F+ ++ +Y LI C++ ++ +AS ++ +M Y
Sbjct: 715 --AGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFD 772
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDM 438
++F V+ L ++G+ A + E M
Sbjct: 773 PASFMPVIDELGKRGSKHAADEFAERMM 800
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 34/293 (11%)
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+L+R L G +++ + + + D IS YN + +E++ D + K M
Sbjct: 86 SLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMA 145
Query: 336 --KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
++ P+ +L I C G +E+A+ FD+M E+G PN L+ YC+
Sbjct: 146 VARVKPQTYTFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHS 205
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+L+ EM G LP +NTV+S LC +G A KLVE+ MR +G P ++
Sbjct: 206 HGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQTVEAEKLVEK-MREVGLS--PDIVTFN 262
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGIL----PDYLTWNSLL------------------ 491
I ALC+ G AS + M + P+ +T+N +L
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDS 322
Query: 492 ------ICLSQQTTWLL-LLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
+ L W+L L+ +++ ++++E++ K + L S N L HG
Sbjct: 323 MKNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHG 375
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 233/492 (47%), Gaps = 32/492 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR 65
+P E V+ GL R D V PS+ FN+I+ K +D+A+
Sbjct: 242 TPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAK 301
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+F+ M+ G+ D Y+Y IL+ GLC+ +G+ L + M++ G++P+ V YN L
Sbjct: 302 SFF-CMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKG 360
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
G + A +++ M PN VT+++LIC +C+ N+ AL L ++ S GF
Sbjct: 361 FRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLS 420
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+++ T +L LC +V A ++ C EME G P++ TY+
Sbjct: 421 IISSTVLLGSLCKSRQVDVAFKLF---------------C----EMEANGLRPDLITYST 461
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI C+ G + A+ ++ M + I N + + ++ GLC G+I + S
Sbjct: 462 LIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSN 521
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVED 359
I YN ++ G + EA++ KQ+ EK + P V + + GFC++ +
Sbjct: 522 LSLD--IILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQ 579
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A+R D + G PN V Y L++ YC+E ++ EL+ EM P T+ V+
Sbjct: 580 ARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIK 639
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLC+Q + + +L+ EDM +G P Y+ +I+A C+ + A L +M+
Sbjct: 640 GLCKQWKLQESCQLL-EDMDAVGLT--PDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696
Query: 480 ILPDYLTWNSLL 491
+ P +T+N L+
Sbjct: 697 LEPTSVTYNILI 708
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 192/407 (47%), Gaps = 29/407 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + T+I GL + + + + + + P+ I +IL L K I AR +
Sbjct: 454 PDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMY 513
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++ S + D Y I++ G + KL + +G+ P V +N+L++ C
Sbjct: 514 F-DYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFC 572
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
N K+ +AR L+ ++ EPN VT++ L+ YC+E N+ + L LL + + P +
Sbjct: 573 INRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHI 632
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T V++ LC + K++ C+ L++M+ G P+ +YN +I
Sbjct: 633 TYTVVIKGLC-------------------KQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++C+ + A +++ M + + VTY+ LI G C G + D +L +++ K
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN 733
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAV-DRSLKILGFCVDGNVEDAK 361
Y +++ + D+A+ Y +QM EK F ++ D S I C V +AK
Sbjct: 734 LNKY--AYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAK 791
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
F M+ +G P+ +++ L++A+ Q + EL+ EM G+L
Sbjct: 792 YFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 189/428 (44%), Gaps = 59/428 (13%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M++ G Q + +L+ LC + +V FKL M++ G++P+ + Y+TLIH LCK
Sbjct: 410 KEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQ 469
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+V +A L M PN + ++ C++ + A + + + D++
Sbjct: 470 GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMER 229
+++ G +AV++ ++ GE+G + G C R L ++
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL 589
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G PN TY L++ YCE G + S L++ ++MK I +TY +I+GLC ++ +
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQE 649
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
++L+ M D+ + ++S YN+++ + +A + +M L P +V ++
Sbjct: 650 SCQLLEDM-DAVGLTPDQVS-YNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNIL 707
Query: 348 ILGFCV-----------------------------------DGNVEDAKRCFDQMIEEGG 372
I GFCV G+V+ A F QM+E+G
Sbjct: 708 INGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF 767
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
++ Y +I C+ V EA M G P F +L+ + G++ + +
Sbjct: 768 EVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFE 827
Query: 433 LVEEDMRG 440
L+ E ++
Sbjct: 828 LLAEMIKS 835
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 204/460 (44%), Gaps = 39/460 (8%)
Query: 50 NSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM-- 107
+ I++ L ED D A FY G Q ++ ++ L R+ + +L M
Sbjct: 95 DQIIEHLNVEDADSAVDFYYLLSNEFGFQHSRFSRLVVSHVLARKKRLNELRLVLDQMLL 154
Query: 108 -KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNA 166
+ G P SLC+ +G RS + ++V + +L CAY + + +A
Sbjct: 155 HEGSGSAP----------SLCE-LLLGSFRSW-----DSSNVVWDMLACAYSRSAMVHDA 198
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG----EQGRLGKVKGGCR 222
L +L K F+ + T +L L + D ++ SG E V G CR
Sbjct: 199 LFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCR 258
Query: 223 ---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
F ++ E K P+V ++N ++S YC+ G +D A F M G+ + +
Sbjct: 259 QSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYS 318
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y+ LI GLC G + + L + ME+ G + + YN + G + A +++
Sbjct: 319 YNILIHGLCIAGSMGEALDLKNDMEN--HGLEPDMVTYNILAKGFRLLGLINGAWNIIQK 376
Query: 334 M--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + P V ++ I G C GNVE+A + + +MI G +++ L+ + C+ +
Sbjct: 377 MLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQ 436
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
V A +L EM +G P T++T++ GLC+QG V A+ L E + +P S
Sbjct: 437 VDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYE---KMCSNRIIPNSLI 493
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ ++ LCEKG A M ++ + D + +N ++
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMI 533
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 120/386 (31%), Positives = 196/386 (50%), Gaps = 27/386 (6%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNA 166
G + +++ N ++ SL K G++G S+ +M N VTF ++I CK A
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKA 248
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
++E ++GF P V+T +++ C G++ A +L KE
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL-------------------KE 289
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M K PN T+NILI +C + +A VF +M+ G+ N VTY++LI GLCS G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+D+ L + M S G K + YN+++ G ++ EA E L + K L P +
Sbjct: 350 LDEALGLQDKM--SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I + G ++DA M++ G PNV Y+CLI +C+E V+EA +L KEM G
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G T+N ++ LC++G A++L++E +G Y+ LIK C KG
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSL 490
+ A+ LL +M+ KG++P+ T++ L
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTYDIL 553
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 199/386 (51%), Gaps = 32/386 (8%)
Query: 50 NSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N +L LVKE I + + Y K+M+ + + T+ +++ GLC + ++ MK
Sbjct: 198 NPMLVSLVKEGRIGVVESVY-KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLV 164
+ G P+ + YNT+I CK GK+ +A +L+ +M PN++TF+ILI +C++EN+
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVT 316
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A + E+ G P+VVT ++ LCS G++ +A+ + +
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQD------------------ 358
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M G PNV TYN LI+ +C+ +L A ++ +D+ G++ N +T++TLI
Sbjct: 359 -KMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--V 342
GR+DD + +M D+ G +S YN ++ G RE EA + K+ME +A V
Sbjct: 418 GRMDDAFLLRSMMLDT--GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLV 475
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMI---EEGGVPNVVIYDCLIHAYCQEERVREASELM 399
++ + C G A R D+M ++G N+V Y+ LI +C + ++ EA+ L+
Sbjct: 476 TYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLL 535
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQG 425
EM G +P +T++ + + +G
Sbjct: 536 NEMLEKGLIPNRTTYDILRDEMMEKG 561
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 172/380 (45%), Gaps = 69/380 (18%)
Query: 14 FITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
F VI GL G+ + DVV+ + + +PS+ +N+I+D K K
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVED---MKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+A + ++ T+ IL+ G C V K+ M+ +G++PN V YN+LI+ LC NG
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+ A L M +PN VT++ LI +CK++ L A +L+ G P+V+T
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME-RKGCLPNVDTYNILISS 245
+++ GR+ DA L+ M G PNV TYN LI
Sbjct: 409 TLIDAYGKAGRMDDAF--------------------LLRSMMLDTGVCPNVSTYNCLIVG 448
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ---LMEDSKE 302
+C G + A + +M+ +G+ + VTY+ L+ LC G +++L LME K+
Sbjct: 449 FCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME--KK 506
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G + I YN + I GFC G +E+A R
Sbjct: 507 GRRANIVTYNVL---------------------------------IKGFCNKGKLEEANR 533
Query: 363 CFDQMIEEGGVPNVVIYDCL 382
++M+E+G +PN YD L
Sbjct: 534 LLNEMLEKGLIPNRTTYDIL 553
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/397 (28%), Positives = 191/397 (48%), Gaps = 45/397 (11%)
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
T+ HSL G G A S++ DM L+ AY K + AL +++ +GF
Sbjct: 143 TIFHSLSVLGSWGCANSIIVDM----------LVWAYVKNGEMDLALEGFDRAGDYGFRL 192
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
++ +L V +++E GR+G V+ KEM R+ NV T++
Sbjct: 193 SALSCNPML------------VSLVKE----GRIGVVES---VYKEMIRRRIGVNVVTFD 233
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
++I+ C+ G A DV DMK G S + +TY+T+I G C G++ +L
Sbjct: 234 VVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALL------ 287
Query: 301 KEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
KE RI P +N ++ G R+ A + ++M++ L P V + I G C +
Sbjct: 288 KEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSN 347
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +++A D+M G PNVV Y+ LI+ +C+++ ++EA E++ ++ G P TF
Sbjct: 348 GKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT++ + G + A L+ M + G P Y+ LI C +G + A L +
Sbjct: 408 NTLIDAYGKAGRMDDAF-LLRSMM--LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKE 464
Query: 475 MVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMV 510
M G G+ D +T+N L+ L ++ T + LL+EM
Sbjct: 465 MEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMT 501
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 30/298 (10%)
Query: 9 PDESIFITVIRGLGRA-RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P + T+I G +A +M ++V++ + P+ FN ++D + E++ A+
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKK 320
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ ++M G+Q + TY L+ GLC ++ + L M G+KPN V YN LI+
Sbjct: 321 VF-EEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK + AR ++ D+ + PN +TF+ LI AY K + +A +L G P+V
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T ++ C R G VK + KEME G ++ TYNIL
Sbjct: 440 STYNCLIVGFC-------------------REGNVKEARKLAKEMEGNGLKADLVTYNIL 480
Query: 243 ISSYCETGVLDSALDVFNDMKI---DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+ + C+ G A+ + ++M + G N VTY+ LI+G C+ G++++ ++L M
Sbjct: 481 VDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 200/431 (46%), Gaps = 33/431 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG---VKPNSVIYNTLIHSL 126
++M G D ++Y L+KGLC+ + + +LL M + G PN V YNT+I
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF 210
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G+V +A L +M P+ VT++ LI CK + + A+ +L+ F G +PD
Sbjct: 211 FKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDT 270
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T ++ CS+G++ +AV R LK+M G P+V TY++L
Sbjct: 271 RTYNIMIRGYCSLGQLEEAV-------------------RLLKKMSGSGLQPDVVTYSLL 311
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I YC+ G A VF+ M G N Y L+ G + G + D +L LM ++
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM--IRD 369
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G +N ++ + D+A+ +M + L P V S I C G VEDA
Sbjct: 370 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F+QM+ EG PN++ + LIH C ++ EL EM G P A NT++
Sbjct: 430 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 489
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC++G V A DM I G P Y+ LI C G + L +MV G+
Sbjct: 490 LCKEGRVVEAQDFF--DMV-IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546
Query: 481 LPDYLTWNSLL 491
PD T+NSLL
Sbjct: 547 RPDSWTYNSLL 557
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 231/504 (45%), Gaps = 37/504 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
+I+GL +D A D+V R TP + +N+++ L E M
Sbjct: 132 LIKGLCDGNRTDD---AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHM 188
Query: 73 MASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
A G + +Y ++ G V + L H M +G+ P+ V YN+LI LCK
Sbjct: 189 TADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKA 248
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ +A +++ M + P+ T++I+I YC L A+ LL+K G PDVVT
Sbjct: 249 QAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTY 308
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD-------- 237
+ +++ C +GR +A + + +G+ L KG L +V
Sbjct: 309 SLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 368
Query: 238 --------TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+NILI +Y + G +D A+ F +M+ +G+ + V+Y T+I LC GR++D
Sbjct: 369 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED 428
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYR--ENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ M EG I + S+++GL E ++ E L + + P A+ +
Sbjct: 429 AVYHFNQM--VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 486
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ C +G V +A+ FD +I G P+VV Y+ LI YC ++ E+ + + M G
Sbjct: 487 MDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGL 546
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P + T+N++L+G + G V AL L E R + S + ++ L + G +
Sbjct: 547 RPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITS---NIMLHGLFQAGRIVA 603
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L ++MV +G T+N++L
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVL 627
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 228/503 (45%), Gaps = 37/503 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
PPD + ++I GL +A+ ++ V + + P + +N ++ ++E +
Sbjct: 232 PPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVR 291
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L KKM SG+Q D TY++L++ C R + + M +G KPNS IY+ L
Sbjct: 292 LL-----KKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHIL 346
Query: 123 IHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+H G + R L+ M F+ILICAY K + A+ + G
Sbjct: 347 LHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 406
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
PDVV+ + V+ +LC GRV DAV + +G +G+ K
Sbjct: 407 RPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 466
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
EM +G P+ N ++ + C+ G + A D F+ + G+ + V+Y+TLI G C
Sbjct: 467 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC 526
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR-- 340
G++D+ +K L M G + YNS+L G ++ + ++AL ++M + +
Sbjct: 527 FVGKMDESIKQLDRM--VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFC 584
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
A+ ++ + G G + A+ + +M++ G + Y+ ++ C+ V EA + +
Sbjct: 585 AITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFE 644
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ + TF+ V++ L + G + A L + RG +P YS +IK+
Sbjct: 645 DLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSA---MVLRGPVPDVITYSLMIKSHI 701
Query: 461 EKGGFQSASMLLVQMVGKGILPD 483
E+G + + L + M G D
Sbjct: 702 EEGLLEESDNLFLSMEKNGCAAD 724
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 193/466 (41%), Gaps = 62/466 (13%)
Query: 45 SLKIFNSILDVLVKED--------IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
S+ FNS+L V+ + D LA + + M+ SGV IL++ C R
Sbjct: 48 SVHAFNSVLTVVARADSSSSPRHSAALAVSLF-NTMVRSGVNMMAAIIGILIRCFCTVGR 106
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICA 156
+ F + G + +V N LI LC + A +
Sbjct: 107 LDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDM------------------ 148
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
+ + G+ PDV + +++ LC + +A+E+L G
Sbjct: 149 ------------VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYN- 195
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
C PNV +YN +I + + G +D A +F++M G+ + VTY++
Sbjct: 196 ---------------CSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNS 240
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
LI GLC +D + ILQ M D +G YN ++ G Q +EA+ LK+M
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFD--KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 298
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P V SL I +C G +A+ FD M+ +G PN IY L+H Y + + +
Sbjct: 299 SGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALID 358
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
+L+ M G FN ++ + G V A+ E MR G P YS
Sbjct: 359 VRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE-MRQ--NGLRPDVVSYST 415
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+I LC+ G + A QMV +G+ P+ +++ SL+ L W
Sbjct: 416 VIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 461
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 205/441 (46%), Gaps = 38/441 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ +I+ ++ G + DV DL+ R + + FN ++ K +D A
Sbjct: 338 PNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTA 397
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M +G++ D +Y+ ++ LC T RV D + M S G+ PN + + +LIH LC
Sbjct: 398 F-TEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLC 456
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ + L +M P+ + + ++ CKE +V A + G PDVV
Sbjct: 457 SIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVV 516
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +++ C VG+ ++ES +Q L M G P+ TYN L+
Sbjct: 517 SYNTLIDGYCFVGK-------MDESIKQ------------LDRMVSIGLRPDSWTYNSLL 557
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ Y + G ++ AL ++ +M + + +T + ++ GL GRI ++ M D G
Sbjct: 558 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVD--RG 615
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD-----GNVE 358
++ RI YN+VL GL + DEAL + E L + + ++ ++ G ++
Sbjct: 616 TQLRIETYNTVLGGLCENSCVDEAL---RMFEDLRSKEFELDVRTFSIVINALLKVGRID 672
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+AK F M+ G VP+V+ Y +I ++ +E + E+ L M +G + N ++
Sbjct: 673 EAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIV 732
Query: 419 SGLCRQGNV---GTALKLVEE 436
L +G+V GT L ++E
Sbjct: 733 RRLLEKGDVRRAGTYLTKIDE 753
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 156/571 (27%), Positives = 247/571 (43%), Gaps = 107/571 (18%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
+++GL I D++ R +P+L F+++++V KE +D A + Y M+
Sbjct: 246 ILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLY-NLMIEK 304
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK---------------------- 113
G+ D Y+IL+ GL ++ +G L + +RGVK
Sbjct: 305 GIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKA 364
Query: 114 -------------PNSVIYNTLIHSLCKNGKV----GRARSLMSDMEEPNDVTFSILICA 156
PN V Y+ LI+ LC+NG+V G ++ EP+ +T+S LI
Sbjct: 365 IEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDG 424
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---- 212
+CK ENL + L G VPDVV + ++ L G + +A+ ++ ++G
Sbjct: 425 FCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLN 484
Query: 213 ------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
RL + + G + M +P+V TY +L+ E G LD AL +F
Sbjct: 485 NYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFF 544
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+ G S + + Y TLI G C GL+I +LM+ + G I YN ++ +R
Sbjct: 545 QLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN--GIFPDICIYNVLINMFFR 602
Query: 321 ENQQDEALEYLKQMEK----------------------------LF---------PRAVD 343
E + LE L+++ K LF P A+
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I +C DG ++DA F M+E G PN++ Y CLI Y + E A EL ++M
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKML 722
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR----GIGRGSLPGSGHYSPLIKAL 459
G P +++ ++ GLC++G L+EE IGR LP Y LI+
Sbjct: 723 GDRVSPNIVSYSILIDGLCKKG-------LMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
C+ G A ML M+ GI+PD L +L
Sbjct: 776 CKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 210/495 (42%), Gaps = 40/495 (8%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDD 81
R M++ V +S+ ++ S + +LD+L+ D ID+ Y + GV
Sbjct: 152 RNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGLGV---- 207
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
Y + V G + RG+ P V N ++ LC ++G A
Sbjct: 208 --YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDM 265
Query: 142 M----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M PN VTFS LI YCKE L A L G VPD+V + ++ L G+
Sbjct: 266 MVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGK 325
Query: 198 VMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ + + + +G R+G + M ++G PNV TY+I
Sbjct: 326 LEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSI 385
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI+ C G + A VF + G+ + +TY +LI G C + DG + +M +
Sbjct: 386 LINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM--LR 443
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG-----N 356
+G + + ++ GL R+ DEAL + Q K R + + + +DG
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVK---RGLTLNNYLFNALIDGCFRLKR 500
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
D + + M +P+VV Y L+ ++ R+ EA L ++ G+ P + T
Sbjct: 501 TRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCT 560
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G C++ + T L++ + G P Y+ LI +G ++ LL +++
Sbjct: 561 LIDGFCKKRDPATGLQIFKLMQ---SNGIFPDICIYNVLINMFFREGCVENVLELLREII 617
Query: 477 GKGILPDYLTWNSLL 491
G+ PD +T+N+++
Sbjct: 618 KYGLEPDIVTYNTMI 632
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 196/454 (43%), Gaps = 92/454 (20%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGR------------------ARSLMSDMEEPNDV 148
++ G P S +Y+ L+H C+NG V R A S M D+ +D
Sbjct: 132 FRNYGSNP-STVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSD- 189
Query: 149 TFSILICAY---CK----EENLVNALVL---LEKSFSF-------GFVPDVVTITKVLEL 191
+++ Y CK E + N+ + +EK +F G VP +V K+L+
Sbjct: 190 RIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC ++ A + F M R G PN+ T++ LI+ YC+
Sbjct: 250 LCMGNQIGVASD-------------------FFDMMVRSGPSPNLVTFSTLINVYCKELR 290
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A ++N M GI + V Y LI GL G++++G + + G K + +
Sbjct: 291 LDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA--LARGVKMDVVIF 348
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+S++ R +A+E +M E + P V S+ I G C +G V +A F Q+++
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G P+V+ Y LI +C+ E +R+ L M G++P + +++GL RQG +
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468
Query: 430 ALKLVEEDM-RGIGRGS-------------------------------LPGSGHYSPLIK 457
AL+ + + RG+ + +P Y+ L+K
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVK 528
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L E+G A L Q++ KG PD++ + +L+
Sbjct: 529 GLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLI 562
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 165/397 (41%), Gaps = 60/397 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+ +F +I G R + D +K L+ + + P + + ++ L ++ +D A A +
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ ++ G D Y L+ G C G ++ +M+S G+ P+ IYN LI+ +
Sbjct: 544 FQ-LLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V L+ ++ EP+ VT++ +IC YC + A+ L E P+ +T
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C GR+ DA+ I M +G PN+ TY+ LI
Sbjct: 663 FTILIDAYCKDGRMDDAMLI-------------------FSSMLERGPEPNILTYSCLID 703
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y +T +SA +++ M D +S N V+Y LI GLC G LME++
Sbjct: 704 GYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKG----------LMEEASLAF 753
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ I L P + + I G+C G + +A +
Sbjct: 754 QCAIG-------------------------RHLLPDVIAYGILIRGYCKVGRLAEAMMLY 788
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
D M+ G +P+ ++ L Q+ + S + E
Sbjct: 789 DHMLVNGIMPDDLLQKALAEYGFQDSQASIYSTVFPE 825
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 42/314 (13%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G+ G ++ F G P+ Y+ L+ YC G++D A+D F M G+S +
Sbjct: 117 GQFGNLEVLGEFHGSFRNYGSNPST-VYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISH 175
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
++ L RID ++E+ +E KG + Y V + + ++ L +
Sbjct: 176 YAASEMLDLLIDSDRID------VILENYEEMCKG-LGVYEFVFNSFLKRGEVEKGLNFH 228
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ + + L P+ VD + + G C+ + A FD M+ G PN+V + LI+ YC+E
Sbjct: 229 RALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN----------------------- 426
R+ EA L M G +P ++ +++GL R G
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348
Query: 427 ---------VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
VG K +E R + G P YS LI LC G A + Q++
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408
Query: 478 KGILPDYLTWNSLL 491
+G+ P LT++SL+
Sbjct: 409 QGLEPSVLTYSSLI 422
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 140/483 (28%), Positives = 206/483 (42%), Gaps = 67/483 (13%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK--------------------- 108
++M G D +Y IL+KGLC R + +LLH+M
Sbjct: 150 QRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGF 209
Query: 109 -----------------SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
RG+ P+ V Y T+I LCK RA + M + PN+
Sbjct: 210 FTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNN 269
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
T++ LI Y + +LE+ + G PD T +L LC GR +A +
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDS 329
Query: 208 SGEQGRLGKV------------KGGC----RFLKEMERKGCLPNVDTYNILISSYCETGV 251
+G KV KG FL M G P+ +NI S+Y + G+
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSKEGSKGRISP 310
+D A+D+FN M+ G+S N V Y LI LC GR+DD +K Q++ EG I
Sbjct: 390 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI---NEGVTPNIVV 446
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+NS++YGL ++ + A E + +M + + P AV + I C G V + +R D M
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+ Y LI YC R EA ++ M G P T+NT+L G C +
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L E +R +G PG Y+ ++ L + F A L + M+ G D T+N
Sbjct: 567 DAYCLFREMLR---KGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYN 623
Query: 489 SLL 491
+L
Sbjct: 624 IIL 626
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 200/446 (44%), Gaps = 31/446 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFK-LLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ +G + D L+KGLC RVG+ LL M G P++V Y L+ LC
Sbjct: 116 ILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEK 175
Query: 131 KVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L+ M + PN V++SI+I + E + L + G PDVV
Sbjct: 176 RAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVV 235
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T V++ LC A + ++ + G +GK K + L+EM
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEM 295
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G P+ TY L++ C+ G A F+ M GI TY LI G + G +
Sbjct: 296 SARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGAL 355
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ L LM ++ I +N + D+A++ +M + L P V+
Sbjct: 356 SEMHSFLDLMVENGLSPDHHI--FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I C G V+DA+ F+QMI EG PN+V+++ L++ C ++ A EL+ EM
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 473
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P A FNT++ LC G V +L++ M + G P + Y+PLI C G
Sbjct: 474 GICPNAVFFNTLICNLCNVGRVMEGRRLIDL-MEHV--GVRPDAFSYTPLISGYCLTGRT 530
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A + MV G+ P +T+N+LL
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLL 556
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 225/509 (44%), Gaps = 31/509 (6%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDI 61
H + PP+ + VI G ++ +++ R + P + + +++D L K +
Sbjct: 191 HGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDR-GIPPDVVTYTTVIDGLCKAQL 249
Query: 62 -DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
D A + ++M+ +G + ++YTY L+ G + + ++L M +RG+KP+ Y
Sbjct: 250 FDRAEGVF-QQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYG 308
Query: 121 TLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+L++ LCKNG+ AR M +P T+ ILI Y + L L+
Sbjct: 309 SLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN 368
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G PD G + A++I + + G +LG+V
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+M +G PN+ +N L+ C + A ++ +M GI N V ++TLI
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
LC+ GR+ +G +++ LME G + Y ++ G + DEA + M L
Sbjct: 489 LCNVGRVMEGRRLIDLMEHV--GVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLS 546
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + + G+C ++DA F +M+ +G P VV Y+ ++H Q +R EA EL
Sbjct: 547 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 606
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M G T+N +L+GLC+ V A K+ + +G ++ +I A
Sbjct: 607 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQS---LCSKGLQLNIITFTIMIGA 663
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTW 487
L + G + A L + G++P+ +T+
Sbjct: 664 LLKGGRKEDAMDLFAAIPANGLVPNVVTY 692
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/489 (25%), Positives = 216/489 (44%), Gaps = 27/489 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I G +VV+ + +S + P + S+L+ L K F+
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ G++ TY IL+ G + + L +M G+ P+ I+N + K
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A + + M + PN V + LI A CK + +A V + + G P++V
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC+V + A E++ E +QG +G+V G R + ME
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ +Y LIS YC TG D A VF+ M G+S VTY+TL+ G CS RID
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
D + + M ++G + YN++L+GL++ + EA E M + + I
Sbjct: 567 DAYCLFREM--LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624
Query: 349 L--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C V++A + F + +G N++ + +I A + R +A +L + +G
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 684
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+P T+ V L +G++ L + G+ P S + L++ L +G
Sbjct: 685 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKN---GTAPNSQMLNALVRRLLHRGDIS 741
Query: 467 SASMLLVQM 475
A L ++
Sbjct: 742 RAGAYLSKL 750
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 208/494 (42%), Gaps = 59/494 (11%)
Query: 15 ITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI----DLARAFYRK 70
I R R+ ++D +K D + S++ FN +L + + +LA + + +
Sbjct: 18 IIAERARSRSLGLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNR 77
Query: 71 --KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + V + TY+IL+ C + GF ++ G + + + N L+ LC
Sbjct: 78 MVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCH 137
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
+VG A VLL++ G +PD V+ T +
Sbjct: 138 GKRVGEAMD------------------------------VLLQRMPELGCMPDTVSYTIL 167
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
L+ LC+ R +A+E+L + + + C PNV +Y+I+I+ +
Sbjct: 168 LKGLCNEKRAEEALELLH----------------MMADDHGRRCPPNVVSYSIVINGFFT 211
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G +D ++F +M GI + VTY T+I GLC D + Q M D+ G K
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDN--GFKPNN 269
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN +++G + E ++ L++M L P + C +G +A+ FD
Sbjct: 270 YTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDS 329
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MI +G P V Y LIH Y + + E + M +G P FN S + G
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 389
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ A+ + + MR G P +Y LI ALC+ G A + QM+ +G+ P+ +
Sbjct: 390 IDKAMDIFNK-MRQ--HGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446
Query: 487 WNSLLICLSQQTTW 500
+NSL+ L W
Sbjct: 447 FNSLVYGLCTVDKW 460
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 185/418 (44%), Gaps = 29/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD IF + MI+ + + + + ++P++ + +++D L K +D A
Sbjct: 372 PDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ GV + + L+ GLC ++ +L++ M +G+ PN+V +NTLI +LC
Sbjct: 432 F-NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLC 490
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+V R L+ ME P+ +++ LI YC A + + S G P V
Sbjct: 491 NVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEV 550
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L CS R+ DA C F +EM RKG P V TYN ++
Sbjct: 551 TYNTLLHGYCSASRIDDAY------------------CLF-REMLRKGVTPGVVTYNTIL 591
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+T A +++ +M G + TY+ ++ GLC +D+ K+ Q + +G
Sbjct: 592 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL--CSKG 649
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ I + ++ L + ++++A++ + L P V L +G++E+
Sbjct: 650 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 709
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
F M + G PN + + L+ + A + ++ + AST + ++S
Sbjct: 710 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMS 767
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK----ED-IDLARAFYRKK 71
++ GL ++ +++ K + + ++ F ++ L+K ED +DL A
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAA----- 679
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
+ A+G+ + TY ++ + L + + L M+ G PNS + N L+ L G
Sbjct: 680 IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 739
Query: 132 VGRARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEK 172
+ RA + +S ++E N T S+L+ + +E +A L EK
Sbjct: 740 ISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPEK 784
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 134/456 (29%), Positives = 232/456 (50%), Gaps = 37/456 (8%)
Query: 49 FNSILDVL--VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
FNSIL L V++ +AR + + AS V+ D TY IL+ GLC RVGD ++L
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCAS-VRPDVVTYGILVNGLCKAGRVGDALRVLDG 197
Query: 107 MKSRG--VKPNSVIYNTLIHSLCKNGKVGRARSL----MSDME--EPNDVTFSILICAYC 158
M + ++P+ V NT++ LCK+G+V A + MS + PN VT++ LI A+C
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ N+ A L+EK + G ++VT+ ++ LC GR A+E E GK
Sbjct: 258 RVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVWPEGKG- 316
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
N TY+ L+ + T + A+++F++ +G S + + Y T+I
Sbjct: 317 ----------------NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GL GR++D + M+++ G K YN ++ G R+ + EA E L++M++
Sbjct: 361 SGLTQAGRLEDACSMASSMKEA--GFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + + G C G+ +MI++G P+V+ + L+H YC+ ++ EA
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPL 455
+++ M G P +NT++ LC++G+V A++L +E + S+P + ++ L
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDE----MKEKSVPANVTTFNAL 534
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+K L +K + A L+ QM + PDY+T + L+
Sbjct: 535 LKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 189/401 (47%), Gaps = 30/401 (7%)
Query: 119 YNTLIHSLCKNGKV-GRAR--SLMSDME--EPNDVTFSILICAYCKEENLVNALVLLE-- 171
+N+++ +L + V G AR +LM P+ VT+ IL+ CK + +AL +L+
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
PDVVT+ V++ LC GRV +A+ +E+ R+ V G
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQ-----RMSSVHG------------ 241
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PN TYN LI ++C G + A ++ M+ +G+ N VT +T++ GLC GR L
Sbjct: 242 CPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKIL 349
+ + KG Y++++ L N A+E K E P A+ I
Sbjct: 302 EFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMIS 361
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G G +EDA M E G + Y+ LI +C+++R+ EA EL++EM G P
Sbjct: 362 GLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRP 421
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+NT+LSG C+ G+ +L+ + I G P + L+ C+ G A
Sbjct: 422 DVCTYNTLLSGSCKAGDFAAVDELLG---KMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEM 509
+L M GI P+ + +N+L+ L ++ L + L +EM
Sbjct: 479 RILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEM 519
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 190/425 (44%), Gaps = 33/425 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKED-IDLAR 65
PD + ++ GL +A + D ++ D +SR ++ P + N+++D L K + A
Sbjct: 170 PDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEAL 229
Query: 66 AFYRKKMMA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF ++M + G + TY L+ C + ++L+ M++ GV N V NT++
Sbjct: 230 AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVG 289
Query: 125 SLCKNGKVGRARSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC+ G+ G A + + N VT+S L+ A N+ A+ L + S G
Sbjct: 290 GLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGH 349
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PD + ++ L GR+ DA C M+ G +
Sbjct: 350 SPDAIMYFTMISGLTQAGRLEDA-------------------CSMASSMKEAGFKLDTKA 390
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNILI+ +C L A ++ +MK GI + TY+TL+ G C G ++L M
Sbjct: 391 YNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMI 450
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
D +G + + + ++++G + + DEAL L+ M++ + P V + I C G+
Sbjct: 451 D--DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGD 508
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V+ A FD+M E+ NV ++ L+ + +A ELM +M P T +
Sbjct: 509 VDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDV 568
Query: 417 VLSGL 421
++ L
Sbjct: 569 LMEWL 573
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 238/551 (43%), Gaps = 51/551 (9%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+Q PP F ++ + + + + ++ + + F + P++ L +L+ L
Sbjct: 55 MQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYT----LHILINSFCHLN 110
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G Q D T+ L++G+C+ ++G+ L M G +P+ V Y
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYG 170
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ M + PN ++ +I + CK+ + A L + +
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G PD+ T ++ LC++ +L E + + GKV
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ +M ++G PNV TY L+ +C +D A+ VF+ M G N ++Y+TLI G
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 281 LCSGGRIDDGLKILQLME---------------DSK--EGSKGRISPYNSVLYGLYRENQ 323
C RID + LM+ D+ +G + YN+++ G + +
Sbjct: 351 YCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 410
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
D+A+ +M ++L P V S I G C ++DA F +M+ +PN+V Y
Sbjct: 411 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 470
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
L+ C+ + EA L+K + G P N + G+CR G + A L
Sbjct: 471 LLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS--- 527
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQQTTW 500
+G P YS +I LC +G AS L +M G + +N++ L T
Sbjct: 528 SKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 587
Query: 501 LLLLLLNEMVS 511
+ LL EMV+
Sbjct: 588 RAIQLLQEMVA 598
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 197/457 (43%), Gaps = 41/457 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T+I GL + + ++ + + N P++ +N+I+D L K D + AF
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK-DRQVTEAFN 222
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G+ D +TY L+ LC LL+ M + P+ V +NT++ +LC
Sbjct: 223 LFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALC 282
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GKV A ++ M EPN VT++ L+ +C + A+ + + G +P+V+
Sbjct: 283 KEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVI 342
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ C + R+ A+ + + M KGC+PNV +YN LI
Sbjct: 343 SYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLI 402
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME----- 298
+ YC+ +D A+ +F +M + + VTY TLI GLC R+ D + + M
Sbjct: 403 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 462
Query: 299 --------------------------DSKEGSK--GRISPYNSVLYGLYRENQQDEALEY 330
+ EGS I N + G+ R + + A +
Sbjct: 463 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+ L P S+ I G C G +++A + F +M E G N IY+ + + +
Sbjct: 523 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 582
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
A +L++EM G+ AST + L G
Sbjct: 583 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG 619
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 197/448 (43%), Gaps = 83/448 (18%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
S+ +NT+ +G + ++ P+ V F+ L+ + K ++ L L + S
Sbjct: 36 SLHFNTI------DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89
Query: 176 FGFVPDVVT--------------------ITKVLEL---------------LCSVGRVMD 200
FG P++ T + K+L+L +C G++ +
Sbjct: 90 FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGE 149
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A+ + ++ +G ++G R L M +K C PNV YN +I
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
S C+ + A ++F++M GIS + TY++LI LC+ +L M DSK
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ +N+V+ L +E + EA + + +M + + P V + + G C+ +++A +
Sbjct: 270 D--VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERV-------------------REASELMKEMT 403
FD M+ +G +PNV+ Y+ LI+ YC+ +R+ EA ++ M
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMV 387
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G +P ++NT+++G C+ + A+ L E R + +P + YS LI LC
Sbjct: 388 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR---QELIPDTVTYSTLIHGLCHVE 444
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A L +MV +P+ +T+ LL
Sbjct: 445 RLQDAIALFHEMVACSQIPNLVTYRILL 472
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 216/450 (48%), Gaps = 42/450 (9%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ +GV + YT+ +L++ LC +N + +L M +G +PN L+ C+ G+
Sbjct: 142 MIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGR 201
Query: 132 VGRARSLMSDM--EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A + N V ++ L+ ++CK++ A L+E+ G +PDVVT +
Sbjct: 202 TKQALEFVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRI 261
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
LC G+V +A I + G LG K PNV T+N+++ +C+
Sbjct: 262 SALCRAGKVFEASRIFRDMQMDGELGLPK---------------PNVVTFNLMLKGFCQE 306
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G+++ A + MK G + +Y+T + GL G++ +G +L M ++ G + I
Sbjct: 307 GMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVEN--GIEPNIY 364
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN V+ GL R + +A + M ++P V + + G+C G V +AK ++M
Sbjct: 365 SYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEM 424
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
I +G PN + L+++ +E R EA E++++M Y T N V++GLCR G +
Sbjct: 425 IRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGEL 484
Query: 428 GTALKLVEEDMRGIGRGSL----PGSG----------------HYSPLIKALCEKGGFQS 467
A ++V E M G SL P +G Y+ LI LC+ G +
Sbjct: 485 EKASEVVSE-MWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEE 543
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A ++M+ K + PD +T+++ ++ +Q
Sbjct: 544 AKKKFIEMMAKNLHPDSVTYDTFVLNFCKQ 573
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 238/502 (47%), Gaps = 22/502 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +++G + M+ + + + + SL+ +N+ L L++ L
Sbjct: 291 PNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSV 350
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ +G++ + Y+Y I+M GLC + + D +L+ +M S GV P++V Y TL+H C
Sbjct: 351 LDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCS 410
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A++++++M PN T + L+ + KE A +L+K + D VT
Sbjct: 411 KGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVT 470
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG--RLGKVKGGCRFLKEMERKGC-LPNVDTYNI 241
V+ LC G + A E++ E G LGK + + +P+V TY
Sbjct: 471 CNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTT 530
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI+ C+ G L+ A F +M + + VTYDT + C G+I L++L+ ME +
Sbjct: 531 LINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDME--R 588
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G + YNS++ GL + Q E + +M + + P + I C G +D
Sbjct: 589 NGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKD 648
Query: 360 AKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMK---EMTGHGYLPIASTFN 415
A +M+++G V PNV + LI A+C+ + A EL + GH + FN
Sbjct: 649 ATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFN 708
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+L+G G + A +L E + R L + Y LI LC+ G A LL ++
Sbjct: 709 ELLAG----GKLSDAKELFEASLE---RSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKL 761
Query: 476 VGKGILPDYLTWNSLLICLSQQ 497
+ KG D+ ++ ++ LS++
Sbjct: 762 IDKGYCFDHSSFIPVIDGLSKR 783
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 200/453 (44%), Gaps = 70/453 (15%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P++ +N ++D L + + L M+++GV D TY L+ G C +V + +
Sbjct: 361 PNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAI 420
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCK 159
L+ M +G PN+ NTL++SL K G+ A ++ M E + VT +I++ C+
Sbjct: 421 LNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCR 480
Query: 160 EENLVNALVLLEKSFSFGF----------------------VPDVVTITKVLELLCSVGR 197
L A ++ + ++ G VPDV+T T ++ LC VG+
Sbjct: 481 NGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGK 540
Query: 198 VMDA----VEILEESGEQG------------RLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ +A +E++ ++ + GK+ R LK+MER GC + TYN
Sbjct: 541 LEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNS 600
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI G + + ++M+ GI + TY+ +I LC GG+ D +L M D
Sbjct: 601 LILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLD-- 658
Query: 302 EGSKGRISPYNSVLYGLYRENQQ-----------DEALEYLKQMEKLFPRAVDRSLKILG 350
KG +SP S L + + D AL E L+ SL
Sbjct: 659 ---KGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALY------SLMFNE 709
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
G + DAK F+ +E + +Y+ LI C++ R+ +A L++++ GY
Sbjct: 710 LLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFD 769
Query: 411 ASTFNTVLSGLCRQGN------VGTALKLVEED 437
S+F V+ GL ++GN +G ++L ED
Sbjct: 770 HSSFIPVIDGLSKRGNKQQADELGRIMELALED 802
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 141/293 (48%), Gaps = 16/293 (5%)
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M + G P T+N+LI S CE+ LD A ++F+ M G N T L+RG C G
Sbjct: 141 DMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAG 200
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
R L+ + D K G YN+++ +++ DEA + +++M + L P V
Sbjct: 201 RTKQALEFV----DGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVT 256
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGV----PNVVIYDCLIHAYCQEERVREASELM 399
+ +I C G V +A R F M +G + PNVV ++ ++ +CQE + EA L+
Sbjct: 257 FNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLV 316
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ M G ++NT L GL R G + +++E + G P Y+ ++ L
Sbjct: 317 ETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDE---MVENGIEPNIYSYNIVMDGL 373
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMV 510
C A L+ MV G+ PD +T+ +LL C S+ + +LNEM+
Sbjct: 374 CRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYC-SKGKVFEAKAILNEMI 425
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 147/505 (29%), Positives = 241/505 (47%), Gaps = 30/505 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
E +FI+VI + + V+ + F PS+KI+N +LD L+ E+ I + Y
Sbjct: 109 SEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 168
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R M G + + +TY +L+K LC N+V KLL M ++G PN+V Y T+I S+C+
Sbjct: 169 RD-MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCE 227
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
G V R L ++ EP ++ LI CKE + + L+ + G P+V++ + +
Sbjct: 228 VGMVKEGRQL-AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTL 286
Query: 189 LELLCSVGRVMDAVEILEESGEQG------RLGKVKGGC----------RFLKEMERK-G 231
+ L + G++ A +L + ++G L + GC +M R G
Sbjct: 287 INELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFG 346
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PNV YN L+ +C G +D A+ VF M+ G S N TY +LI G G ++ +
Sbjct: 347 LQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAV 406
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
I M S G + Y S++ L R ++ EA ++ M E P + I
Sbjct: 407 YIWNKMLTS--GCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 464
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G ++ A++ F QM ++ PN+V Y+ L+ + R+ EA L +E+ G
Sbjct: 465 GLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 524
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
ST+NT+L G C G G AL+LV + M G P + +I A C++G + A
Sbjct: 525 WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVN---GKSPDEITMNMIILAYCKQGKAERA 581
Query: 469 SML--LVQMVGKGILPDYLTWNSLL 491
+ LV + PD +++ +++
Sbjct: 582 VQMLDLVSCGRRKWRPDVISYTNVI 606
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 193/409 (47%), Gaps = 39/409 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P S++ +I GL + R V+ + ++P++ ++++++ L I+LA +
Sbjct: 243 PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSL 302
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM-KSRGVKPNSVIYNTLIHSL 126
+M+ G + +T + L+KG + D + + M + G++PN V YNTL+
Sbjct: 303 L-AQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGF 361
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C +G + +A S+ MEE PN T+ LI + K +L A+ + K + G P+V
Sbjct: 362 CSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNV 421
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKE 226
V T ++E LC + +A ++E ++ V KG C + ++
Sbjct: 422 VVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 481
Query: 227 MERK-GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
ME++ C PN+ TYN L+ + ++ A + ++ + G+ W+ TY+TL+ G C+ G
Sbjct: 482 MEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAG 541
Query: 286 RIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPR 340
L+++ ++M + K S I+ N ++ ++ + + A++ L + K P
Sbjct: 542 LPGIALQLVGKMMVNGK--SPDEIT-MNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPD 598
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ + I G C ED F++MI E +P ++ + CQE
Sbjct: 599 VISYTNVIWGLCRSNCREDGVILFERMISERIIP-------ILRSVCQE 640
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 15/277 (5%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T+ ++I G +DS + MK+ G + D I + ++ + +++
Sbjct: 77 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH---CSEDLFISVISVYRQVGLAERAVEMF 133
Query: 298 EDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
KE G + YN VL L EN+ + M++ P ++ + C +
Sbjct: 134 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 193
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
V+ AK+ +M +G PN V Y +I + C+ V+E +L + + P+ S +
Sbjct: 194 NKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAER-----FEPVVSVY 248
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +++GLC++ + ++L+ E + +G P YS LI L G + A LL Q
Sbjct: 249 NALINGLCKERDYKGGVELMSE---MVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305
Query: 475 MVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMV 510
M+ +G P+ T +SL+ C + TT+ L + N+M+
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMI 342
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 23/267 (8%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE-NQQDEALEY 330
+T++ +IR L G++D +LQ M+ +G + SV+ +YR+ + A+E
Sbjct: 76 LTFEVMIRKLAMDGQVDSVQYLLQQMK--LQGFHCSEDLFISVI-SVYRQVGLAERAVEM 132
Query: 331 LKQMEKLFPRAVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
++++ D S+KI +D ++ + M +G PNV Y+ L+ A
Sbjct: 133 FYRIKEF---GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKA 189
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ +V A +L+ EM+ G P A ++ TV+S +C G V +L E
Sbjct: 190 LCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE------- 242
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLL 504
P Y+ LI LC++ ++ L+ +MV KGI P+ +++++L+ LS L
Sbjct: 243 -PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFS 301
Query: 505 LLNEMVS--FVMVVHELSAKEKRCKLR 529
LL +M+ +H LS+ K C +R
Sbjct: 302 LLAQMLKRGCHPNIHTLSSLVKGCFVR 328
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 232/517 (44%), Gaps = 48/517 (9%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFN-MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
V+R LG+ I+ +V+ D + R S+ +N LD L K + ++M
Sbjct: 11 VLRHLGK---ISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G DD+TY+I+++GLC + +LL ++ GVK N + Y+ +I CK +V A
Sbjct: 68 GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127
Query: 136 RSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+ M P+ VTF+ L+ C E + A VL E G P+V++ + +L+
Sbjct: 128 LEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC GR+ +A + EE E+ + +V C ++M KG
Sbjct: 188 GLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKA 247
Query: 235 NV-----------------DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ + N +I C +G+LD A F +M + ++TL
Sbjct: 248 DAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTL 307
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
I +C R+ DG+ + Q M+ KE + YN ++ L + Q DEA E + +M
Sbjct: 308 IHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMAN 367
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P V S + G C G ++ A ++M +EG P+ +++A + +V
Sbjct: 368 YGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDY 427
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A ++ M G P T+NT+L GLC+ G + A+ + + + P Y+
Sbjct: 428 ALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFL---AKMVAAKCTPDVFSYTI 484
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+I ALC G A + +MV +G+LPD + ++SLL
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/532 (25%), Positives = 235/532 (44%), Gaps = 61/532 (11%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTP---SLKIFNSILDVLVKED-IDL 63
PPD+ + V+RGL +A ++ KA +L+ + + ++ ++ ++D K +D
Sbjct: 70 PPDDFTYSIVLRGLCKAGELD---KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDD 126
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A ++ G D T+ L+KGLC R+ + F L M G +PN + Y+TL+
Sbjct: 127 ALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLL 186
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCK G++ A L +M E P+ V ++ + CK + A K + G
Sbjct: 187 DGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSK 246
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG-------- 231
D V + V+ +LC G +A + E R G + C+ +EM +
Sbjct: 247 ADAVAFSTVIGILCKKGHAEEAQNQMIE--HLCRSGMLDEACKTFEEMISRNHPPSAELF 304
Query: 232 ------------------------------CLPNVDTYNILISSYCETGVLDSALDVFND 261
C PN++TYNI++ + C+ LD A ++ N+
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G+S + VTY L+ GLC G++D +L+ M SKEG S+L L +
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM--SKEGVFPDSFTDASILNALSKA 422
Query: 322 NQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ D AL +L+ M+ P V + + G C G +++A +M+ P+V Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+I A C+ + A + +EM G LP ++++L GL R G AL+L++ +
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL- 541
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + ++ LC+ G + A ++ +M G D T+ S++
Sbjct: 542 -----CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVV 588
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 195/429 (45%), Gaps = 48/429 (11%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Q +TY + L N ++ M+ RG P+ Y+ ++ LCK G++ +A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 136 RSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDVVTITKVLE 190
+ L+ + E N +T+S++I CK + +AL + + S G VPDVVT +L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
LCS R+ +A + E M + GC PNV +Y+ L+ C+ G
Sbjct: 153 GLCSGERMSEAFVLFEY-------------------MAKAGCEPNVISYSTLLDGLCKAG 193
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
LD A ++ +M + V Y + + GLC R+ + + M +GSK
Sbjct: 194 RLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM--VTKGSKADAVA 251
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++V+ L ++ +EA + I C G +++A + F++MI
Sbjct: 252 FSTVIGILCKKGHAEEAQNQM----------------IEHLCRSGMLDEACKTFEEMISR 295
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASEL---MKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
P+ +++ LIHA C+ +R+ + L MK M P T+N ++ LC+ +
Sbjct: 296 NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQL 355
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A +LV E M G P YS L+ LC+ G A LL +M +G+ PD T
Sbjct: 356 DEAQELVNE-MANYGLS--PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 488 NSLLICLSQ 496
S+L LS+
Sbjct: 413 ASILNALSK 421
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/471 (24%), Positives = 216/471 (45%), Gaps = 49/471 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F ++++GL +++ + +++ P++ ++++LD L K +D A
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + S V D Y + GLC NRV + M ++G K ++V ++T+I LC
Sbjct: 202 WEEMVEKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILC 260
Query: 128 KNGKVGRARSLM---------------------SDMEEPNDVTFSILICAYCKEENLVNA 166
K G A++ M S P+ F+ LI A CK + L +
Sbjct: 261 KKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDG 320
Query: 167 LVLLEKSFS---FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
++L ++ S F P++ T +++ LC ++ +A E++ E G
Sbjct: 321 VLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSAL 380
Query: 213 -----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+LGK+ C L+EM ++G P+ T ++++ + G +D AL MK G
Sbjct: 381 VDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS 440
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ + VTY+TL+ GLC GRID+ + L M +K + Y ++ L R Q A
Sbjct: 441 TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK--CTPDVFSYTIIITALCRSGQAAGA 498
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
++M K + P V + G +G +ED + + P+ V++ ++
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNG-LEDLA--LELLKTSLCKPDFVMHKMVLDG 555
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
C+ + +A E+++ M G+ A T+ +V+SGL + G V A +LV++
Sbjct: 556 LCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDD 606
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 150/310 (48%), Gaps = 23/310 (7%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++M+R+G P+ TY+I++ C+ G LD A ++ ++ G+ N +TY +I G C
Sbjct: 61 FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
R+DD L+I + M S G + +NS+L GL + EA + M K P
Sbjct: 121 ASRVDDALEIFKTMS-SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNV 179
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ S + G C G +++A R +++M+E+ VP++V Y + C+ RV EA + ++
Sbjct: 180 ISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRK 239
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTAL-KLVEEDMRG-------------IGRGSLP 447
M G A F+TV+ LC++G+ A +++E R I R P
Sbjct: 240 MVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP 299
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL---PDYLTWNSLL--ICLSQQTTWLL 502
+ ++ LI A+C+ +L +M P+ T+N ++ +C ++Q
Sbjct: 300 SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE-A 358
Query: 503 LLLLNEMVSF 512
L+NEM ++
Sbjct: 359 QELVNEMANY 368
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD +++ L +A ++ + + + TP L +N++LD L K ID A F
Sbjct: 407 PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITF 466
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM+A+ D ++Y I++ LC + + + M RGV P++V+Y++L+ L
Sbjct: 467 L-AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525
Query: 128 KNGKVGRARSLM-SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+NG A L+ + + +P+ V +++ CK +A ++E+ GF D T
Sbjct: 526 RNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYI 585
Query: 187 KVLELLCSVGRVMDAVEILEESGE 210
V+ L +G+V A ++++++ E
Sbjct: 586 SVVSGLRKLGKVDKARQLVDDASE 609
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 218/481 (45%), Gaps = 58/481 (12%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G + + +TY L+ L +R + M + +P++ + L+ LC++ ++ +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R L+ M+E P+D ++ LI Y K ++ A L + +P VVT T +++
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC R DAV++L+E M KGC PN+ TYN+++ CE
Sbjct: 122 LCKAERTRDAVKLLDE-------------------MRDKGCSPNIYTYNVIVEGLCEERK 162
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A + +M + G + VTY++ I+GLC R+D+ K L M + + + Y
Sbjct: 163 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPD-----VVSY 217
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+V+ GL + D A L M P V S I GFC G VE A D M++
Sbjct: 218 TTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 277
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G PN+V Y+ L+ A + + +A +++ EM G+ P ++N + GLC+ V
Sbjct: 278 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 337
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLI----------KALCEKGGFQSASMLLVQMVGKG 479
A + + R + RG P + YS LI LC+ G F A L +++ +
Sbjct: 338 AKAVFD---RMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEK 394
Query: 480 IL-PDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAH 536
I PD +N +L C +Q + + +H+ ++ C + + N L H
Sbjct: 395 ICEPDVFFYNVMLDSHCKRRQ------------IDKALQIHKQMLEKNCCNVVTWNILVH 442
Query: 537 G 537
G
Sbjct: 443 G 443
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 232/474 (48%), Gaps = 38/474 (8%)
Query: 49 FNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+N +L L +E D A A + ++M+ Q D +T+AIL++GLC +N++ KLL M
Sbjct: 10 YNKLLLQLTREHRHDKASAVF-QEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
K G P+ IYN LI K G+A +++M + P VT++ ++ CK E
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV------ 217
+A+ LL++ G P++ T ++E LC ++ +A ++LEE +G V
Sbjct: 129 RDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188
Query: 218 -KGGCR------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
KG C+ K + R P+V +Y +I+ C++G LDSA + + M G + +
Sbjct: 189 IKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPD 248
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY +LI G C GG ++ + +L M K G + + YNS+L L+R +A +
Sbjct: 249 VVTYSSLIDGFCKGGEVERAMGLLDSM--LKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 306
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN----------VVI 378
L +ME+ P V + I G C V+ AK FD+M+E G PN +++
Sbjct: 307 LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILL 366
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y L+ C+ R EA L ++ P +N +L C++ + AL++ ++
Sbjct: 367 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 426
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + ++ L+ LC A +L+ MV +G +PD++T+ +L+
Sbjct: 427 L----EKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 476
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 217/459 (47%), Gaps = 33/459 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD++I+ +I G +A+ K + + + P++ + +I+D L K +
Sbjct: 75 PDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKL 134
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G + YTY ++++GLC ++ + K+L M RG P+ V YN+ I LCK
Sbjct: 135 LDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK 194
Query: 129 NGKVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+V AR ++ M P+ V+++ +I CK +L +A +L+ + G PDVVT +
Sbjct: 195 CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSS 254
Query: 188 VLELLCSVGRVMDAVEILEES----------------GEQGRLGKVKGGCRFLKEMERKG 231
+++ C G V A+ +L+ G RLG + L EMER+G
Sbjct: 255 LIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 314
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI----------RGL 281
P+V +YN I C+ + A VF+ M G + N +Y LI GL
Sbjct: 315 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGL 374
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPR 340
C GGR D+ + + D K + + YN +L + Q D+AL+ KQM EK
Sbjct: 375 CKGGRFDEACALFSKVLDEKI-CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCN 433
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ + G CVD + DA+ M++EG +P+ V Y L+ A C+ + A EL +
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTAL----KLVE 435
E G +P T++ +++GL + A KLVE
Sbjct: 494 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVE 532
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P + +N +LD K + +A K M + T+ IL+ GLC+ +R+ D +
Sbjct: 398 PDVFFYNVMLDSHCKRR-QIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETM 456
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L M G P+ V Y TL+ ++CK GK A L + + P+ VT+S LI
Sbjct: 457 LLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVH 516
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTI 185
E A +L K +VPD T+
Sbjct: 517 ENMAEEAYLLFTKLVERRWVPDDKTL 542
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 214/445 (48%), Gaps = 38/445 (8%)
Query: 55 VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
L+K+ R ++++AS + D +Y ++ G C+T ++ + +L+ M ++P
Sbjct: 95 ALIKKLCASGRTAEARRVLAS-CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEP 150
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLL 170
++ YNTLI LC G+ A +++ DM P+ VT++IL+ A CK A+ LL
Sbjct: 151 DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLL 210
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK 230
++ G PD+VT V+ +C GRV DA+E FLK +
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAME-------------------FLKSLPSY 251
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC PN +YNI++ C + A + +M G N VT++ LI LC G ++
Sbjct: 252 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPA 311
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++IL + K G YN +L+ ++ + D A+ +++ M +P V + +
Sbjct: 312 MEILDQI--PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLL 369
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C G V+ A Q+ ++G P ++ Y+ +I + + EA EL+ EM G
Sbjct: 370 TALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQ 429
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLV--EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T++T+ SGLCR+G + A+K +DM G P + Y+ ++ LC++
Sbjct: 430 PDIITYSTISSGLCREGRIEEAIKAFCKVQDM-----GIRPNTVLYNAILLGLCKRRATH 484
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
SA L MV G +P+ T+ L+
Sbjct: 485 SAIDLFTYMVSNGCMPNESTYTILI 509
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 199/390 (51%), Gaps = 24/390 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ + A ++ D YTY L++GLC R + +L M RG P+ V Y L+ + CK
Sbjct: 140 RRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCK 199
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+A L+ +M + P+ VT+++++ C+E + +A+ L+ S+G P+ V+
Sbjct: 200 RSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVS 259
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEME 228
VL+ LC+ R DA +++ E +GR G V+ L ++
Sbjct: 260 YNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIP 319
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ GC PN +YN ++ ++C+ +D A+ M G + V+Y+TL+ LC GG +D
Sbjct: 320 KYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVD 379
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+++L ++D +G + YN+V+ GL + + +EALE L +M + L P + S
Sbjct: 380 AAVELLHQLKD--KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYST 437
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
G C +G +E+A + F ++ + G PN V+Y+ ++ C+ A +L M +G
Sbjct: 438 ISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNG 497
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+P ST+ ++ GL +G V A +++ E
Sbjct: 498 CMPNESTYTILIEGLAYEGLVKEAREMMAE 527
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 187/425 (44%), Gaps = 69/425 (16%)
Query: 9 PDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + T+IRGL GR R N + D++ R P + + +L+ K R+
Sbjct: 150 PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR-GCVPDVVTYTILLEATCK------RSG 202
Query: 68 YRK------KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
Y++ +M G D TY +++ G+C RV D + L + S G +PN+V YN
Sbjct: 203 YKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNI 262
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
++ LC + A LM++M PN VTF++LI C+ + A+ +L++ +G
Sbjct: 263 VLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYG 322
Query: 178 FVPDVVTITKVLELLCS---VGRVMDAVEILEESG-------------EQGRLGKVKGGC 221
P+ ++ +L C + R M VE++ SG R G+V
Sbjct: 323 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAV 382
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
L +++ KGC P + +YN +I + G + AL++ N+M G+ + +TY T+ GL
Sbjct: 383 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGL 442
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C GRI++ +K ++D G + YN++L GL + A++
Sbjct: 443 CREGRIEEAIKAFCKVQDM--GIRPNTVLYNAILLGLCKRRATHSAIDL----------- 489
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
F M+ G +PN Y LI E V+EA E+M E
Sbjct: 490 ----------------------FTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAE 527
Query: 402 MTGHG 406
+ G
Sbjct: 528 LCSRG 532
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 169/336 (50%), Gaps = 25/336 (7%)
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK----GCLPNVDTYNILISSYCETGVL 252
R+++++ LE S +K C + E + C P+V +YN +++ YC TG L
Sbjct: 77 RLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQL 136
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D+A + M ++ ++ TY+TLIRGLC GR D+ L +L M + G + Y
Sbjct: 137 DNARRLVAAMPMEPDTY---TYNTLIRGLCGRGRTDNALAVLDDM--LRRGCVPDVVTYT 191
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+L + + +A++ L +M + P V ++ + G C +G V+DA +
Sbjct: 192 ILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSY 251
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PN V Y+ ++ C ER +A +LM EM+ G P TFN ++S LCR+G V A
Sbjct: 252 GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPA 311
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
++++++ + G P S Y+P++ A C++ A + MV G PD +++N+L
Sbjct: 312 MEILDQIPK---YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTL 368
Query: 491 LICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
L L + E+ + V ++H+L K+K C
Sbjct: 369 LTALCRG---------GEVDAAVELLHQL--KDKGC 393
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 25/265 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PP+ F +I L R ++ ++ D + ++ TP+ +N IL K+ +D A A
Sbjct: 289 PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA 348
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + M++SG D +Y L+ LC V +LLH +K +G P + YNT+I L
Sbjct: 349 FV-ELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K GK A L+++M +P+ +T+S + C+E + A+ K G P+
Sbjct: 408 TKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNT 467
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V +L LC A+++ M GC+PN TY IL
Sbjct: 468 VLYNAILLGLCKRRATHSAIDL-------------------FTYMVSNGCMPNESTYTIL 508
Query: 243 ISSYCETGVLDSALDVFNDMKIDGI 267
I G++ A ++ ++ G+
Sbjct: 509 IEGLAYEGLVKEAREMMAELCSRGV 533
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+ GL R I + +KA V + P+ ++N+IL L K +
Sbjct: 430 PDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDL 489
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M+++G ++ TY IL++GL V + +++ + SRGV +++ I L
Sbjct: 490 FTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLL 547
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 212/433 (48%), Gaps = 30/433 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G D T+ L KGLCL ++ F + + G + + Y TLIH LCK G
Sbjct: 145 KILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVG 204
Query: 131 KVGRARSLMS----DMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A L+ ++ +PN V ++ +I + CK + + A L + S G PDVVT +
Sbjct: 205 ETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYS 264
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C +G++ DA+++ + M + P+V T+NIL++++
Sbjct: 265 ALISGFCILGKLKDAIDLFNK-------------------MILENIKPDVYTFNILVNAF 305
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + VF+ M GI NFVTY++L+ G C ++ I M ++ G
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM--AQGGVNP 363
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I Y+ ++ G + + DEA+ K+M + + P V S I G G + A +
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
DQM + G PN+ Y+ ++ A C+ +V +A L+ + G+ P ST++ ++ GLC+
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQS 483
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A K+ E+ + +G Y+ +I+ C +G F A LL +M G +PD
Sbjct: 484 GKLEDARKVFEDLLV---KGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540
Query: 485 LTWNSLLICLSQQ 497
T+ +++ L ++
Sbjct: 541 KTYEIIILSLFKK 553
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 195/408 (47%), Gaps = 29/408 (7%)
Query: 63 LARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ +AF + K++A G D +Y L+ GLC LL + V+PN V+YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I S+CK V A L S+M P+ VT+S LI +C L +A+ L K
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN 290
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
PDV T ++ C G++ + + + +QG + +V
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
M + G P++ +Y+I+I+ +C+ D A+++F +M I + VTY +LI GL
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-P 339
GRI L+++ M D G I YNS+L L + +Q D+A+ L + +K F P
Sbjct: 411 SKSGRISYALQLVDQMHD--RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQP 468
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
S+ I G C G +EDA++ F+ ++ +G +V Y +I +C E EA L+
Sbjct: 469 DISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALL 528
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+M +G +P A T+ ++ L ++ A KL+ E I RG LP
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE---MIARG-LP 572
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 188/434 (43%), Gaps = 60/434 (13%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
N V D L + + R P + +N ++ SL K+ L ME +PN V
Sbjct: 63 NNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 122
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ILI +C+ + A + K G+VPD +T T + + LC G++ A ++
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVV 182
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G ++G+ + L+ ++ PNV YN +I S C+ +++
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A D+F++M GIS + VTY LI G C G++ D + + M
Sbjct: 243 EAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM---------------- 286
Query: 314 VLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + P ++ + FC DG +++ K FD M+++G
Sbjct: 287 -------------------ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN V Y+ L+ YC + V +A + M G P +++ +++G C+ A+ L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-- 491
+E R + +P YS LI L + G A L+ QM +G+ P+ T+NS+L
Sbjct: 388 FKEMHR---KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDA 444
Query: 492 ICLSQQTTWLLLLL 505
+C + Q + LL
Sbjct: 445 LCKTHQVDKAIALL 458
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 184/352 (52%), Gaps = 34/352 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
P+ ++ T+I + + +++N+ +++VS+ ++P + +++++ +K+ ID
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSK-GISPDVVTYSALISGFCILGKLKDAID 281
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L KM+ ++ D YT+ IL+ C ++ +G + +M +G+KPN V YN+L
Sbjct: 282 LFN-----KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ C +V +A+S+ + M + P+ ++SI+I +CK + A+ L ++
Sbjct: 337 MDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
+PDVVT + +++ L GR+ A++++++ ++G + +V
Sbjct: 397 IPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIA 456
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L + + KG P++ TY+ILI C++G L+ A VF D+ + G + + Y +I+G C
Sbjct: 457 LLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFC 516
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G ++ L +L MED+ G Y ++ L+++++ D A + L++M
Sbjct: 517 VEGLFNEALALLSKMEDN--GCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 204/418 (48%), Gaps = 50/418 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDV-----LVKEDI 61
D+ + T+I GL + + + A DL+ R + + P++ ++N+I+D LV E
Sbjct: 189 DQISYGTLIHGLCK---VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
DL +M++ G+ D TY+ L+ G C+ ++ D L + M +KP+ +N
Sbjct: 246 DLFS-----EMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNI 300
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+++ CK+GK+ +++ M + PN VT++ L+ YC + + A + G
Sbjct: 301 LVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD+ + + ++ C + + +A+ + KEM RK +P+V
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLF-------------------KEMHRKNIIPDVV 401
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+ LI ++G + AL + + M G+ N TY++++ LC ++D + +L
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKF 461
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD-----RSLKILGFC 352
+D +G + IS Y+ ++ GL + + ++A K E L + + ++ I GFC
Sbjct: 462 KD--KGFQPDISTYSILIKGLCQSGKLEDAR---KVFEDLLVKGYNLDVYAYTIMIQGFC 516
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
V+G +A +M + G +P+ Y+ +I + +++ A +L++EM G LP+
Sbjct: 517 VEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG-LPL 573
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 26/295 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
PD F ++ + + + D++ + + P+ +NS++D LVKE ++ A++
Sbjct: 293 PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE-VNKAKS 351
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M GV D +Y+I++ G C + + L M + + P+ V Y++LI L
Sbjct: 352 IFNT-MAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K+G++ A L+ M + PN T++ ++ A CK + A+ LL K GF PD+
Sbjct: 411 SKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDI 470
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGR-------LGKVKGGC---------RFLKE 226
T + +++ LC G++ DA ++ E+ +G ++G C L +
Sbjct: 471 STYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSK 530
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
ME GC+P+ TY I+I S + D A + +M G+ NF YD + L
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNF--YDLYLTRL 583
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 227/459 (49%), Gaps = 40/459 (8%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAI 86
+D V + R P++ FN + +L + + DL A K+M G+ D YT I
Sbjct: 72 DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALC-KQMELKGIAYDLYTLNI 130
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---- 142
++ C ++G F + + G +PN+V +NTL++ LC G+V A L+ M
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ +T + ++ C ++ + A+ L+ + + G P+ T +L +C G A+
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++ L++ME + P+V TY I+I + C+ G LD AL F++M
Sbjct: 251 DL-------------------LRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGL 318
+ GI N TY++LI CS GR DDG ++L+ M K I+P +++++ L
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK------ITPNVVTFSALIDSL 345
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+E + EA + +M + P + + I G C D +++A + D M+ +G P++
Sbjct: 346 VKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y+ LI+ +C+ ++V + L ++M+ G + T++T++ G C+ + A K+ +E
Sbjct: 406 WTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQE 465
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+ +G PG Y+ L+ LC+ G + A +L QM
Sbjct: 466 ---MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQM 501
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 205/449 (45%), Gaps = 39/449 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K+ G + + T+ L+ GLCL RV + +L+ M P+ + NT+++ LC
Sbjct: 150 KIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKD 209
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A L++ M +PN T+ ++ CK N +AL LL K P VVT T
Sbjct: 210 RVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYT 269
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+++ LC GR+ DA+ E +G G+ G + L++M +
Sbjct: 270 IIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITR 329
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
PNV T++ LI S + G L A D++N+M GI N +TY++LI GLC+ R+D+
Sbjct: 330 KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEA 389
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ LM +G I YN ++ G + Q D+ + ++M + V S I
Sbjct: 390 NQMMDLM--VSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC + AK+ F +M+ +G P ++ Y L+ C + EA ++ +M
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKME 507
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG------HYSPLIKALCEK 462
+N ++ G+C V A L SLP G Y+ ++ LC++
Sbjct: 508 LDIGIYNIIIHGMCNANKVDDAWSLF---------CSLPSKGVKRDIQSYNIMLSGLCKR 558
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
A L +M G PD T+N+L+
Sbjct: 559 SSLSEADALFRKMKEDGYEPDGCTYNTLI 587
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 219/459 (47%), Gaps = 36/459 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
P+ F T++ GL + + V+ D + P L N+I++ L V E +DL
Sbjct: 158 PNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDL 217
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+MMA+G Q + +TY ++ +C + LL M+ R +KP+ V Y +I
Sbjct: 218 I-----ARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+LCK+G++ A S S+ME + N T++ LI ++C + LL +
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGC---------RF 223
P+VVT + +++ L G++ +A ++ E +G + G C +
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ M KGC P++ TYNILI+ +C+ +D + +F M + G+ + VTY TLI+G C
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
++ K+ Q M +G I Y +L GL + +EAL L QM K +D
Sbjct: 453 SRKLIVAKKVFQEM--VSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKC-KMELD 509
Query: 344 ---RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I G C V+DA F + +G ++ Y+ ++ C+ + EA L +
Sbjct: 510 IGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFR 569
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+M GY P T+NT++ R ++ T+++L+EE R
Sbjct: 570 KMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKR 608
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 132/271 (48%), Gaps = 9/271 (3%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PN T+N L++ C G + A+++ + M + + +T +T++ GLC R+ +
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKI 348
+ ++ M G + Y +L + + AL+ L++ME K+ P V ++ I
Sbjct: 215 VDLIARM--MANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIII 272
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C DG ++DA F +M +G NV Y+ LI ++C R + ++L+++M
Sbjct: 273 DNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKIT 332
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P TF+ ++ L ++G + A L E I RG P + Y+ LI LC A
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNE---MITRGIEPNTITYNSLIYGLCNDKRLDEA 389
Query: 469 SMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
+ ++ MV KG PD T+N L+ C ++Q
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQ 420
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 56/305 (18%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKK---------------------- 71
D+++R +TP++ F++++D LVKE + A+ Y +
Sbjct: 325 DMITR-KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCND 383
Query: 72 ------------MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
M++ G D +TY IL+ G C +V DG +L M RG+ ++V Y
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+TLI C++ K+ A+ + +M P +T++IL+ C L AL +L++
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR------ 222
D+ ++ +C+ +V DA + +G ++ G C+
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563
Query: 223 ---FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
++M+ G P+ TYN LI ++ + +++ + +MK G S + T ++
Sbjct: 564 ADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMD 623
Query: 280 GLCSG 284
L SG
Sbjct: 624 MLSSG 628
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-Y 68
D + T+I+G ++R + K + + P + + +LD L ++ +L A
Sbjct: 439 DTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC-DNGELEEALGI 497
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M ++ D Y I++ G+C N+V D + L + S+GVK + YN ++ LCK
Sbjct: 498 LDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCK 557
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A +L M+E P+ T++ LI A+ + ++ ++ L+E+ GF D T
Sbjct: 558 RSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAST 617
Query: 185 ITKVLELLCS 194
+ V+++L S
Sbjct: 618 VKIVMDMLSS 627
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
VD +DA F M+ +P V+ ++ L + ++ L K+M G
Sbjct: 67 VDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLY 126
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T N +++ CR+ +G A + + + G P + ++ L+ LC +G A L+
Sbjct: 127 TLNIMINCFCRRRKLGFAFSAMGKIFK---LGYEPNTVTFNTLLNGLCLEGRVFEAVELV 183
Query: 473 VQMVGKGILPDYLTWNSLL--ICLSQQTT 499
MV +PD +T N+++ +CL + +
Sbjct: 184 DCMVLSQHVPDLITLNTIVNGLCLKDRVS 212
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 234/503 (46%), Gaps = 29/503 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
+E + +I+GL A+ + + ++ R +P+++ F ++ L K + AR +
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M +GV TY ++ G R+ D K+ +M+ G P+ YNTLI+ LC
Sbjct: 312 -DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC- 369
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K A L+++ + P VTF+ LI YC E +AL + K S D+
Sbjct: 370 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
K++ L R+ +A E+L E G + GKV LK ME
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 489
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R GC PN TYN L+ + L A+ + M+ DGI N +TY TL++G C D
Sbjct: 490 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 549
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ ++ ++ME + G K Y + L + + +EA ++ + + +L I
Sbjct: 550 NAFRLFEMME--QNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL-I 606
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF GN + A ++MI+EG P+ Y L+HA C+++R+ EA ++ +M+ G
Sbjct: 607 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 666
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ ++ + R+G A ++ E G P + Y+ I + C++G + A
Sbjct: 667 CTIFAYTILIDEMLREGKHDHAKRMYNE---MTSSGHKPSATTYTVFINSYCKEGRLEDA 723
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L+++M +G+ PD +T+N L+
Sbjct: 724 EDLILKMEREGVAPDVVTYNILI 746
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 205/427 (48%), Gaps = 31/427 (7%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Q ++Y+Y IL++GLC V L +MK G PN + LI LCK+G+VG A
Sbjct: 248 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 307
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R L M + P+ +T++ +I Y K + +AL + E G PD T ++
Sbjct: 308 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 367
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMERKGCLPN 235
LC + +A E+L + ++G V G C R +M C +
Sbjct: 368 LCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 426
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ + LI+S + L A ++ N++ +G+ N +TY ++I G C G++D L++L+
Sbjct: 427 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 486
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
+ME ++G + YNS++YGL ++ + +A+ L +M+K + P + + + G C
Sbjct: 487 MME--RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 544
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+ + ++A R F+ M + G P+ Y L A C+ R EA + G
Sbjct: 545 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 601
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ T++ G + GN A L+E R I G P S YS L+ ALC++ A +L
Sbjct: 602 YTTLIDGFSKAGNTDFAATLIE---RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 658
Query: 474 QMVGKGI 480
QM +GI
Sbjct: 659 QMSLRGI 665
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 204/452 (45%), Gaps = 35/452 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + ++I G ++ ++ ++ ++ R P+ +NS++ LVK D L +A
Sbjct: 460 PNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK-DKKLHKAMA 518
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G+ + TY L++G C + + F+L +M+ G+KP+ Y L +LC
Sbjct: 519 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 578
Query: 128 KNGKVGRARSLMSDMEEP-NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K G+ A S + V ++ LI + K N A L+E+ G PD T +
Sbjct: 579 KAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 638
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+L LC R+ +A+ IL++ +G R GK R EM
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TY + I+SYC+ G L+ A D+ M+ +G++ + VTY+ LI G G ID
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 758
Query: 291 LKILQLMEDS-------------KEGSKGRISPYNSV-LYGLYRENQQDEALEYLKQMEK 336
L+ M + K KG ++ SV G++ + D + L++M K
Sbjct: 759 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P S I GFC G +E+A D M +G PN IY LI C + +
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
A + M+ G+ P ++ ++ GLC +G+
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 910
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/574 (24%), Positives = 242/574 (42%), Gaps = 105/574 (18%)
Query: 9 PDESIFITVIRGLGRAR------MINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDI 61
PD+ + T+I GL + ++N+ VK TP++ F ++++ + E
Sbjct: 356 PDDWTYNTLIYGLCDQKTEEAEELLNNAVKE-------GFTPTVVTFTNLINGYCMAEKF 408
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A + KMM+S + D + L+ L +R+ + +LL+ + + G+ PN + Y +
Sbjct: 409 DDALRM-KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 467
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I CK+GKV A ++ ME +PN T++ L+ K++ L A+ LL K G
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+P+V+T T +L+ C +A R + ME+ G P+
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAF-------------------RLFEMMEQNGLKPDEH 568
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
Y +L + C+ G A + ++ + G++ V Y TLI G G D +++ M
Sbjct: 569 AYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD--- 354
D EG Y+ +L+ L ++ + +EAL L QM R + ++ +D
Sbjct: 626 ID--EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL---RGIKCTIFAYTILIDEML 680
Query: 355 --GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G + AKR +++M G P+ Y I++YC+E R+ +A +L+ +M G P
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740
Query: 413 TFNTVLSGLCRQGNVGTAL----------------------------------------- 431
T+N ++ G G + A
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGM 800
Query: 432 -KLVEEDM------RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
L+E D+ R + G P YS LI C+ G + A +LL M GKG+ P+
Sbjct: 801 WNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNE 860
Query: 485 LTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHE 518
+ L+ C + +SFV ++ E
Sbjct: 861 DIYTLLIKCCCDTK------FFEKALSFVSIMSE 888
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 230/525 (43%), Gaps = 42/525 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G A +D ++ + + L++F +++ L+K+D
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ A+G+ + TY ++ G C + +V ++L +M+ G +PN+ YN+L++ L K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ +A +L++ M++ PN +T++ L+ C E + NA L E G PD
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKGGCRFLKEMERKG 231
+ + LC GR +A + G + G ++ M +G
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C P+ TY++L+ + C+ L+ AL + + M + GI Y LI + G+ D
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++ M S G K + Y + +E + ++A + + +ME+ + P V ++ I
Sbjct: 690 RMYNEMTSS--GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---ERVREAS---------- 396
G G ++ A +M+ PN Y CL+ + + VR
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLLLKHLLKGNLAYVRSVDTSGMWNLIEL 806
Query: 397 ----ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+L++ M HG P +T++++++G C+ G + A L++ G+G P Y
Sbjct: 807 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDH---MCGKGLSPNEDIY 863
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ LIK C+ F+ A + M G P ++ L++ L +
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNE 908
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 178/417 (42%), Gaps = 72/417 (17%)
Query: 119 YNTLIHSLCK---NGKVGRARS-LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSF 174
YN + SL + +GR S L+ D P+ VT++ +I +YCKE +L A
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G P+ T ++ C R G+++ C M GC
Sbjct: 211 EGGLEPETFTCNALVLGYC-------------------RTGELRKACWLFLMMPLMGCQR 251
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N +Y ILI C+ + AL +F MK DG S N + LI GLC GR+ D +
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
M + G + YN+++ G + + ++AL+ + MEK P + I G C
Sbjct: 312 DAM--PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 369
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE---------------------- 390
D E+A+ + ++EG P VV + LI+ YC E
Sbjct: 370 -DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428
Query: 391 -------------RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLV 434
R++EA EL+ E++ +G +P T+ +++ G C+ G V A LK++
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E D G P + Y+ L+ L + A LL +M GI+P+ +T+ +LL
Sbjct: 489 ERD------GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 539
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 10/263 (3%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN + S + + V++ + DG+ + VTY+T+I+ C G + + +L+
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 210
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
+ G + N+++ G R + +A M + + + S IL G C
Sbjct: 211 EG--GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 268
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V A F M +G PNV + LI C+ RV +A L M +G +P T+N
Sbjct: 269 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 328
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G + G + ALK+ E + G P Y+ LI LC++ + A LL V
Sbjct: 329 MIVGYSKLGRMNDALKIKELMEKN---GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAV 384
Query: 477 GKGILPDYLTWNSLL--ICLSQQ 497
+G P +T+ +L+ C++++
Sbjct: 385 KEGFTPTVVTFTNLINGYCMAEK 407
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 232/517 (44%), Gaps = 48/517 (9%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFN-MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
V+R LG+ I+ +V+ D + R S+ +N LD L K + ++M
Sbjct: 11 VLRHLGK---ISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRR 67
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G DD+TY+I+++GLC + +LL ++ GVK N + Y+ +I CK +V A
Sbjct: 68 GYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDA 127
Query: 136 RSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+ M P+ VTF+ L+ C E + A VL E G P+V++ + +L+
Sbjct: 128 LEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLD 187
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC GR+ +A + EE E+ + +V C ++M KG
Sbjct: 188 GLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKA 247
Query: 235 NV-----------------DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ + N +I C +G+LD A F +M + ++TL
Sbjct: 248 DAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTL 307
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
I +C R+ DG+ + Q M+ KE + YN ++ L + Q DEA E + +M
Sbjct: 308 IHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMAN 367
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P V S + G C G ++ A ++M +EG P+ +++A + +V
Sbjct: 368 YGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDY 427
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A ++ M G P T+NT+L GLC+ G + A+ + + + P Y+
Sbjct: 428 ALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFL---AKMVAAKCTPDVFSYTI 484
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+I ALC G A + +MV +G+LPD + ++SLL
Sbjct: 485 IITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLL 521
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 232/528 (43%), Gaps = 61/528 (11%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTP---SLKIFNSILDVLVKED-IDL 63
PPD+ + V+RGL +A ++ KA +L+ + + ++ ++ ++D K +D
Sbjct: 70 PPDDFTYSIVLRGLCKAGELD---KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDD 126
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A ++ G D T+ L+KGLC R+ + F L M G +PN + Y+TL+
Sbjct: 127 ALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLL 186
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCK G++ A L +M E P+ V ++ + CK + A K + G
Sbjct: 187 DGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSK 246
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG-------- 231
D V + V+ +LC G +A + E R G + C+ +EM +
Sbjct: 247 ADAVAFSTVIGILCKKGHAEEAQNQMIE--HLCRSGMLDEACKTFEEMISRNHPPSAELF 304
Query: 232 ------------------------------CLPNVDTYNILISSYCETGVLDSALDVFND 261
C PN++TYNI++ + C+ LD A ++ N+
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNE 364
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G+S + VTY L+ GLC G++D +L+ M SKEG S+L L +
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM--SKEGVFPDSFTDASILNALSKA 422
Query: 322 NQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ D AL +L+ M+ P V + + G C G +++A +M+ P+V Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+I A C+ + A + +EM G LP ++++L GL R G AL+L++ +
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL- 541
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
P + ++ LC+ G + A ++ +M G D T+
Sbjct: 542 -----CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTY 584
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 195/429 (45%), Gaps = 48/429 (11%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Q +TY + L N ++ M+ RG P+ Y+ ++ LCK G++ +A
Sbjct: 33 GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92
Query: 136 RSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDVVTITKVLE 190
+ L+ + E N +T+S++I CK + +AL + + S G VPDVVT +L+
Sbjct: 93 KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
LCS R+ +A + E M + GC PNV +Y+ L+ C+ G
Sbjct: 153 GLCSGERMSEAFVLFEY-------------------MAKAGCEPNVISYSTLLDGLCKAG 193
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
LD A ++ +M + V Y + + GLC R+ + + M +GSK
Sbjct: 194 RLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM--VTKGSKADAVA 251
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++V+ L ++ +EA + I C G +++A + F++MI
Sbjct: 252 FSTVIGILCKKGHAEEAQNQM----------------IEHLCRSGMLDEACKTFEEMISR 295
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASEL---MKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
P+ +++ LIHA C+ +R+ + L MK M P T+N ++ LC+ +
Sbjct: 296 NHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQL 355
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A +LV E M G P YS L+ LC+ G A LL +M +G+ PD T
Sbjct: 356 DEAQELVNE-MANYGLS--PDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTD 412
Query: 488 NSLLICLSQ 496
S+L LS+
Sbjct: 413 ASILNALSK 421
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 214/471 (45%), Gaps = 49/471 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F ++++GL +++ + +++ P++ ++++LD L K +D A
Sbjct: 142 PDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRL 201
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + S V D Y + GLC NRV + M ++G K ++V ++T+I LC
Sbjct: 202 WEEMVEKSCVP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILC 260
Query: 128 KNGKVGRARSLM---------------------SDMEEPNDVTFSILICAYCKEENLVNA 166
K G A++ M S P+ F+ LI A CK + L +
Sbjct: 261 KKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDG 320
Query: 167 LVLLEKSFS---FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
++L ++ S F P++ T +++ LC ++ +A E++ E G
Sbjct: 321 VLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSAL 380
Query: 213 -----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+LGK+ C L+EM ++G P+ T ++++ + G +D AL MK G
Sbjct: 381 VDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGS 440
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ + VTY+TL+ GLC GRID+ + L M +K + Y ++ L R Q A
Sbjct: 441 TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK--CTPDVFSYTIIITALCRSGQAAGA 498
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
++M K + P V + G +G +ED + + P+ V++ ++
Sbjct: 499 HAIFQEMVKRGVLPDTVLYHSLLDGLARNG-LEDLA--LELLKTSLCKPDFVMHKMVVDG 555
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
C+ + +A E+++ M G+ A T+ V+ GL + G V A +LV++
Sbjct: 556 LCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDD 606
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 150/310 (48%), Gaps = 23/310 (7%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++M+R+G P+ TY+I++ C+ G LD A ++ ++ G+ N +TY +I G C
Sbjct: 61 FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCK 120
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
R+DD L+I + M + G + +NS+L GL + EA + M K P
Sbjct: 121 ASRVDDALEIFKTMS-AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNV 179
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ S + G C G +++A R +++M+E+ VP++V Y + C+ RV EA + ++
Sbjct: 180 ISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRK 239
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTAL-KLVEEDMRG-------------IGRGSLP 447
M G A F+TV+ LC++G+ A +++E R I R P
Sbjct: 240 MVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP 299
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL---PDYLTWNSLL--ICLSQQTTWLL 502
+ ++ LI A+C+ +L +M P+ T+N ++ +C ++Q
Sbjct: 300 SAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE-A 358
Query: 503 LLLLNEMVSF 512
L+NEM ++
Sbjct: 359 QELVNEMANY 368
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 3/204 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD +++ L +A ++ + + + TP L +N++LD L K ID A F
Sbjct: 407 PDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITF 466
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM+A+ D ++Y I++ LC + + + M RGV P++V+Y++L+ L
Sbjct: 467 L-AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525
Query: 128 KNGKVGRARSLM-SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+NG A L+ + + +P+ V +++ CK +A ++E+ GF D T
Sbjct: 526 RNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYI 585
Query: 187 KVLELLCSVGRVMDAVEILEESGE 210
V+ L +G+V A ++++++ E
Sbjct: 586 NVVRGLRKLGKVDKARQLVDDASE 609
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 222/452 (49%), Gaps = 40/452 (8%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAI 86
+D V ++R P L F+ + V+ + + DL K+M G+ + YT +I
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC-KQMELKGIAHNLYTLSI 112
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ C ++ F + + G +P++V ++TLI+ LC G+V A L+ M E
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P +T + L+ C + +A++L+++ GF P+ VT VL+++C G+ A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+ L++ME + + Y+I+I C+ G LD+A ++FN+M
Sbjct: 233 EL-------------------LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGL 318
+I G + + Y TLIRG C GR DDG K+L+ M K +I+P +++++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM------IKRKITPDVVAFSALIDCF 327
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+E + EA E K+M + P V + I GFC + ++ A D M+ +G PN+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ LI+ YC+ + + EL ++M+ G + T+NT++ G C G + A +L +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ R P Y L+ LC+ G + A
Sbjct: 448 ---MVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 245/527 (46%), Gaps = 47/527 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL +++ ++ D + P+L N++++ L
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ +G Q ++ TY ++K +C + + +LL M+ R +K ++V Y+ +I LCK
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + A +L ++ME + + + ++ LI +C + LL PDVV
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEME 228
+ +++ G++ +A E+ +E ++G + G C+ L M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN+ T+NILI+ YC+ ++D L++F M + G+ + VTY+TLI+G C G+++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD---RS 345
++ Q M + + I Y +L GL + ++ALE +++EK +D +
Sbjct: 440 VAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYN 496
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C V+DA F + +G P+V Y+ +I C++ + EA L ++M
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEED-------------------MRGIGRGSL 446
G+ P T+N ++ +G+ + KL+EE R + G
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHE 616
Query: 447 PGSGHYSPLIKALC--EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P ++ L++ C E A L M G P+ +T+N+++
Sbjct: 617 PDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVI 663
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 202/444 (45%), Gaps = 29/444 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G + D T++ L+ GLCL RV + +L+ M G KP + N L++ LC NG
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A L+ M E PN+VT+ ++ CK A+ LL K D V +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+++ LC G + +A + E +G G+ G + L++M ++
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+V ++ LI + + G L A ++ +M GIS + VTY +LI G C ++D
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+L LM +G I +N ++ G + N D+ LE ++M + V + I
Sbjct: 372 NHMLDLM--VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC G +E AK F +M+ P++V Y L+ C +A E+ +++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+N ++ G+C V A L ++G+ P Y+ +I LC+KG
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK----PDVKTYNIMIGGLCKKGSLSE 545
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A +L +M G P+ T+N L+
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILI 569
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 196/449 (43%), Gaps = 41/449 (9%)
Query: 13 IFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
I+ T+IRG A +D K D++ R +TP + F++++D VKE K+
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D TY L+ G C N++ +L +M S+G PN +N LI+ CK
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ L M + VT++ LI +C+ L A L ++ S PD+V+
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERK 230
+L+ LC G A+EI E+ E+ ++ KV + K
Sbjct: 463 LLDGLCDNGEPEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK 521
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+V TYNI+I C+ G L A +F M+ DG S N TY+ LIR G D
Sbjct: 522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG---DA 578
Query: 291 LKILQLMEDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL 349
K +L+E+ K G S L L R + + L P
Sbjct: 579 TKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRP---------- 628
Query: 350 GFCVDGN--VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
FC++ N V DA F M G PNVV Y+ +I + + ++ +M G
Sbjct: 629 -FCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGC 687
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P A T +T +SGLC+Q G+A+ L+ +
Sbjct: 688 QPNAVTKSTFISGLCKQDLHGSAILLLRK 716
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K+ME KG N+ T +I+I+ C L A + G + VT+ TLI GLC
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 285 GRIDDGLKILQLMEDSKEGS--------------KGRIS-------------------PY 311
GR+ + L+++ M + G++S Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 312 NSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
VL + + Q A+E L++ME K+ AV S+ I G C DG++++A F++M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G +++IY LI +C R + ++L+++M P F+ ++ ++G +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L +E I RG P + Y+ LI C++ A+ +L MV KG P+ T+N
Sbjct: 336 AEELHKE---MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 490 LL 491
L+
Sbjct: 393 LI 394
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 134/322 (41%), Gaps = 49/322 (15%)
Query: 10 DESIFITVIRG---LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
D + T+I+G LG+ + ++ + ++VSR + P + + +LD L
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQ--EMVSR-RVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+K+ S ++ D Y I++ G+C ++V D + L + +GVKP+ YN +I L
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV--- 179
CK G + A L MEE PN T++ILI A+ E + + L+E+ GF
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA 597
Query: 180 -------------------PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
PDV T T +L C LEE+ V
Sbjct: 598 STLRFALSTLARMLKAGHEPDVFTFTTLLRPFC-----------LEENAS------VYDA 640
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
K M+ G PNV TYN +I ++ V + M G N VT T I G
Sbjct: 641 PTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700
Query: 281 LCSGGRIDDGLKILQLMEDSKE 302
LC + +L+ ME+ E
Sbjct: 701 LCKQDLHGSAILLLRKMENDNE 722
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 40/190 (21%)
Query: 353 VDGNVEDAKRCFDQMIEEGGVP-----------------------------------NVV 377
VD +DA F +M P N+
Sbjct: 49 VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+I+ C+ ++ A M ++ GY P TF+T+++GLC +G V AL+LV+
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD-- 166
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
R + G P + L+ LC G A +L+ +MV G P+ +T+ +L +C S
Sbjct: 167 -RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 496 QQTTWLLLLL 505
QT + LL
Sbjct: 226 GQTALAMELL 235
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M A G + + TY ++KGL N + +L M RG +PN+V +T I LCK
Sbjct: 645 KNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQ 704
Query: 130 GKVGRARSLMSDMEEPN-DVT 149
G A L+ ME N DVT
Sbjct: 705 DLHGSAILLLRKMENDNEDVT 725
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 208/440 (47%), Gaps = 28/440 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL + V+ D P++ + +I++ L K A A
Sbjct: 163 PDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGL 222
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM +G Q + TY IL+ LC V + + MK++ + P+ YN+LI LC
Sbjct: 223 FKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCN 282
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A +L+++M PN TF++L+ A CKE + A + + G PDVVT
Sbjct: 283 FRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVT 342
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ L+ M+ VE + M KGC P+ +YNILI
Sbjct: 343 YS---SLMYGYSLRMEIVE----------------ARKLFDAMITKGCKPDAFSYNILIK 383
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A +FN+M G++ + V Y+TLI GLC GR+ + + + M + G+
Sbjct: 384 GYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN--GN 441
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ +L G +E +A + M+ + P ++ I C GN++DA++
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARK 501
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ +G +PNV IY +I+ C+E + EA E + M G G P ++N ++ G
Sbjct: 502 LFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFL 561
Query: 423 RQGNVGTALKLVEEDMRGIG 442
+ + A +L+ E MR G
Sbjct: 562 QYKDESRAAQLIGE-MRDRG 580
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 208/452 (46%), Gaps = 61/452 (13%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV-GRARSLMSDME----EPNDVTFS 151
+ D + M R P + + L+ ++ K G+ G SL ME P+ T S
Sbjct: 75 IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
ILI + + + A + K G PD VT ++ LC VG+ AVE ++
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G ++G+ K+ME GC PNV TYNILI S C+ +++ A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED---------------- 299
LD+F+ MK IS + TY++LI+GLC+ R + +L M
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314
Query: 300 -----------------SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
++ G + + Y+S++YG + EA + M + P
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
A ++ I G+C +++AK+ F++MI +G P+ V Y+ LIH CQ R+REA +L K
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKAL 459
M +G LP T++ +L G C++G +G A +L R + L P Y+ LI A+
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRL----FRVMQSTYLKPDIAMYNILIDAM 490
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+ G + A L ++ +G+LP+ + +++
Sbjct: 491 CKFGNLKDARKLFSELFVQGLLPNVQIYTTII 522
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 134/315 (42%), Gaps = 57/315 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE--------- 59
PD + ++I+GL R + + ++ N+ P++ FN ++D + KE
Sbjct: 268 PDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGV 327
Query: 60 ---------------------------DIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+I AR + M+ G + D ++Y IL+KG C
Sbjct: 328 FKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLF-DAMITKGCKPDAFSYNILIKGYC 386
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
R+ + +L + M +G+ P++V YNTLIH LC+ G++ A+ L +M P+
Sbjct: 387 KAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLF 446
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+S+L+ +CKE L A L S PD+ +++ +C G + DA ++ E
Sbjct: 447 TYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSEL 506
Query: 209 GEQGRLGKVK----------------GGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
QG L V+ + ME GC P+ +YN++I + +
Sbjct: 507 FVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDE 566
Query: 253 DSALDVFNDMKIDGI 267
A + +M+ G
Sbjct: 567 SRAAQLIGEMRDRGF 581
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 332 KQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
KQME L P S+ I F V+ A F +MI+ G P+ V ++ LI+ C+
Sbjct: 119 KQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKV 178
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+ +A E + G P T+ T+++GLC+ G A L ++ G P
Sbjct: 179 GKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA---GCQPNV 235
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNE 508
Y+ LI +LC+ A + M K I PD T+NSL+ L W LLNE
Sbjct: 236 VTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNE 295
Query: 509 MVS 511
M S
Sbjct: 296 MTS 298
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 7/173 (4%)
Query: 325 DEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D A +M KL P AV + I G C G A FD G P V Y +
Sbjct: 147 DLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTI 206
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I+ C+ A+ L K+M G P T+N ++ LC+ V AL + M+
Sbjct: 207 INGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSY-MKA-- 263
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
+ P Y+ LI+ LC ++ AS LL +M I+P+ T+N L+ IC
Sbjct: 264 KRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAIC 316
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/143 (17%), Positives = 60/143 (41%), Gaps = 2/143 (1%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDI 61
HS + PD + ++ G + + + ++ + P + ++N ++D + K ++
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
AR + ++ G+ + Y ++ LC + + + M+ G P+ YN
Sbjct: 497 KDARKLF-SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNV 555
Query: 122 LIHSLCKNGKVGRARSLMSDMEE 144
+I + RA L+ +M +
Sbjct: 556 IIRGFLQYKDESRAAQLIGEMRD 578
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 202/398 (50%), Gaps = 28/398 (7%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+D AR + ++ V+ D YT L++GLC R + +L M R P+ V Y
Sbjct: 144 VDAARRWCAER----AVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYT 199
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
L+ + CK +A L+ +M + P+ VT+++++ C+E + +A+ L+ S+
Sbjct: 200 ILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 259
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G P+ V+ VL+ LC+ R DA E++ E G++G R G V+
Sbjct: 260 GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 319
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
L+++ + GC PN +YN L+ ++C+ +D A+ + M G + V+Y+TL+
Sbjct: 320 LEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
LC G +D +++L ++D +G + YN+V+ GL + + EALE L +M + L
Sbjct: 380 LCRSGEVDVAVELLHQLKD--KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 437
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + S G C + +EDA R F ++ + G PN V+Y+ +I C+ A +L
Sbjct: 438 PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDL 497
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
M G+G +P ST+ ++ GL +G + A L++E
Sbjct: 498 FAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDE 535
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 203/436 (46%), Gaps = 43/436 (9%)
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A R+ + A G D Y +M G C +V + R V+ ++ +TLI
Sbjct: 115 AEARRVLAACG--PDVMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRG 169
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC G+ A +++ +M P+ VT++IL+ A CK A+ LL++ G PD
Sbjct: 170 LCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPD 229
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+VT V+ +C GRV DA+E FLK + GC PN +YNI
Sbjct: 230 IVTYNVVVNGICQEGRVDDAIE-------------------FLKNLPSYGCEPNTVSYNI 270
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++ C + A ++ +M G N VT++ LI LC G ++ L++L+ + K
Sbjct: 271 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI--PK 328
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
G YN +L+ ++ + D+A+ +L M +P V + + C G V+
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A Q+ ++G P ++ Y+ +I + + +EA EL+ EM G P T++T+ +
Sbjct: 389 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 448
Query: 420 GLCRQGNVGTALKLVEEDMRGIGR----GSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
GLCR+ + E+ +R G+ G P + Y+ +I LC++ SA L M
Sbjct: 449 GLCREDRI-------EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 501
Query: 476 VGKGILPDYLTWNSLL 491
+G G +P+ T+ L+
Sbjct: 502 IGNGCMPNESTYTILI 517
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 208/441 (47%), Gaps = 50/441 (11%)
Query: 16 TVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRK---- 70
T+IRGL GR R N + +++ R P + + +L+ K R+ Y++
Sbjct: 165 TLIRGLCGRGRTANALAVLDEMLRR-RCVPDVVTYTILLEATCK------RSGYKQAMKL 217
Query: 71 --KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D TY +++ G+C RV D + L + S G +PN+V YN ++ LC
Sbjct: 218 LDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCT 277
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A LM +M + PN VTF++LI C++ + AL +LE+ +G P+ ++
Sbjct: 278 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLS 337
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+L C +Q ++ K FL M +GC P++ +YN L++
Sbjct: 338 YNPLLHAFC----------------KQKKMDKAMA---FLDLMVSRGCYPDIVSYNTLLT 378
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C +G +D A+++ + +K G + ++Y+T+I GL G+ + L++L M +G
Sbjct: 379 ALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEM--VSKGL 436
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKR 362
+ I Y+++ GL RE++ ++A+ +++ + P V + ILG C A
Sbjct: 437 QPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAID 496
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG-------YLPIASTFN 415
F MI G +PN Y LI E ++EA +L+ E+ G +L +
Sbjct: 497 LFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGEEILLDVHLIDVAFLT 556
Query: 416 TVLSGLCRQGNVGTALKLVEE 436
T L C N G L+L E
Sbjct: 557 TFLP--CSNANGGPFLRLPPE 575
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 198/429 (46%), Gaps = 65/429 (15%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+++ S + D T A L+K L + R + ++L P+ + YN ++ C G
Sbjct: 88 RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA-----ACGPDVMAYNAMMAGYCGAG 142
Query: 131 KVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+V AR +C E + D T ++
Sbjct: 143 QVDAARR-------------------WCAERAVER---------------DAYTCDTLIR 168
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
LC GR +A+ +L+E M R+ C+P+V TY IL+ + C+
Sbjct: 169 GLCGRGRTANALAVLDE-------------------MLRRRCVPDVVTYTILLEATCKRS 209
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
A+ + ++M+ G + + VTY+ ++ G+C GR+DD ++ L+ + G +
Sbjct: 210 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL--PSYGCEPNTVS 267
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN VL GL + ++A E + +M + P V ++ I C G VE A +Q+
Sbjct: 268 YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 327
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G PN + Y+ L+HA+C+++++ +A + M G P ++NT+L+ LCR G V
Sbjct: 328 KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 387
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A++L+ + +G P Y+ +I L + G + A LL +MV KG+ PD +T++
Sbjct: 388 VAVELLHQLK---DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 444
Query: 489 SLLICLSQQ 497
++ L ++
Sbjct: 445 TIAAGLCRE 453
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 161/349 (46%), Gaps = 45/349 (12%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T +++ L + GR +A +L C P+V Y
Sbjct: 96 PDAGTCAALIKKLSASGRTAEARRVL------------------------AACGPDVMAY 131
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N +++ YC G +D+A + ++ ++ T DTLIRGLC GR + L +L M
Sbjct: 132 NAMMAGYCGAGQVDAARRWCAERAVERDAY---TCDTLIRGLCGRGRTANALAVLDEM-- 186
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ + Y +L + + +A++ L +M + P V ++ + G C +G V
Sbjct: 187 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 246
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+DA + G PN V Y+ ++ C ER +A ELM EM G P TFN +
Sbjct: 247 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 306
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+S LCR+G V AL+++E+ + G P S Y+PL+ A C++ A L MV
Sbjct: 307 ISFLCRKGLVEPALEVLEQIPK---YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363
Query: 478 KGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
+G PD +++N+LL L + E+ V ++H+L K+K C
Sbjct: 364 RGCYPDIVSYNTLLTALCRS---------GEVDVAVELLHQL--KDKGC 401
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+ GL R I D ++A V + P+ ++N+I+ L K +
Sbjct: 438 PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDL 497
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG 111
M+ +G ++ TY IL++GL + + LL + SRG
Sbjct: 498 FAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRG 540
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 222/452 (49%), Gaps = 40/452 (8%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAI 86
+D V ++R P L F+ + V+ + + DL K+M G+ + YT +I
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC-KQMELKGIAHNLYTLSI 112
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ C ++ F + + G +P++V ++TLI+ LC G+V A L+ M E
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P +T + L+ C + +A++L+++ GF P+ VT VL+++C G+ A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+ L++ME + + Y+I+I C+ G LD+A ++FN+M
Sbjct: 233 EL-------------------LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGL 318
+I G + + Y TLIRG C GR DDG K+L+ M K +I+P +++++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM------IKRKITPDVVAFSALIDCF 327
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+E + EA E K+M + P V + I GFC + ++ A D M+ +G PN+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ LI+ YC+ + + EL ++M+ G + T+NT++ G C G + A +L +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ R P Y L+ LC+ G + A
Sbjct: 448 ---MVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 222/454 (48%), Gaps = 26/454 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL +++ ++ D + P+L N++++ L
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ +G Q ++ TY ++K +C + + +LL M+ R +K ++V Y+ +I LCK
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + A +L ++ME + + + ++ LI +C + LL PDVV
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEME 228
+ +++ G++ +A E+ +E ++G + G C+ L M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN+ T+NILI+ YC+ ++D L++F M + G+ + VTY+TLI+G C G+++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD---RS 345
++ Q M + + I Y +L GL + ++ALE +++EK +D +
Sbjct: 440 VAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYN 496
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C V+DA F + +G P+V Y+ +I C++ + EA L ++M
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
G+ P T+N ++ +G+ + KL+EE R
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 202/444 (45%), Gaps = 29/444 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G + D T++ L+ GLCL RV + +L+ M G KP + N L++ LC NG
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A L+ M E PN+VT+ ++ CK A+ LL K D V +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+++ LC G + +A + E +G G+ G + L++M ++
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+V ++ LI + + G L A ++ +M GIS + VTY +LI G C ++D
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+L LM +G I +N ++ G + N D+ LE ++M + V + I
Sbjct: 372 NHMLDLM--VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC G +E AK F +M+ P++V Y L+ C +A E+ +++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+N ++ G+C V A L ++G+ P Y+ +I LC+KG
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK----PDVKTYNIMIGGLCKKGSLSE 545
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A +L +M G P+ T+N L+
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILI 569
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K+ME KG N+ T +I+I+ C L A + G + VT+ TLI GLC
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 285 GRIDDGLKILQLMEDSKEGS--------------KGRIS-------------------PY 311
GR+ + L+++ M + G++S Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 312 NSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
VL + + Q A+E L++ME K+ AV S+ I G C DG++++A F++M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G +++IY LI +C R + ++L+++M P F+ ++ ++G +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L +E I RG P + Y+ LI C++ A+ +L MV KG P+ T+N
Sbjct: 336 AEELHKE---MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 490 LL 491
L+
Sbjct: 393 LI 394
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 133/328 (40%), Gaps = 57/328 (17%)
Query: 13 IFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
I+ T+IRG A +D K D++ R +TP + F++++D VKE K+
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 72 MMASGVQGDDYTYA-----------------------------------ILMKGLCLTNR 96
M+ G+ D TY IL+ G C N
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
+ DG +L M RGV ++V YNTLI C+ GK+ A+ L +M P+ V++ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L+ C AL + EK D+ ++ +C+ +V DA ++ +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 213 RLGKVK-------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
VK G C+ ++ME G PN TYNILI ++ G +
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ ++K G S + T ++ L G
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 40/190 (21%)
Query: 353 VDGNVEDAKRCFDQMIEEGGVP-----------------------------------NVV 377
VD +DA F +M P N+
Sbjct: 49 VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+I+ C+ ++ A M ++ GY P TF+T+++GLC +G V AL+LV+
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD-- 166
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
R + G P + L+ LC G A +L+ +MV G P+ +T+ +L +C S
Sbjct: 167 -RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 496 QQTTWLLLLL 505
QT + LL
Sbjct: 226 GQTALAMELL 235
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 239/505 (47%), Gaps = 27/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD +F T I + + + ++ + + P++ +N+++D L +
Sbjct: 250 PDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMF 309
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++KM+ GV+ TY+IL+KGL R+GD + +L M +G PN ++YN LI SL +
Sbjct: 310 KEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIE 369
Query: 129 NGKVGRA---RSLM-SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A + LM S T++ LI YCK A LL++ S GF + +
Sbjct: 370 AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGS 429
Query: 185 ITKVLELLCSVGRVMDAVEILEE------SGEQGRLGK-VKGGCRFLKEME--------- 228
T V+ LLCS A+ + E S G L + G C+ K +
Sbjct: 430 FTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFL 489
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG L + T N L+ CE G L+ + ++ G + V+Y+TLI G C ++D
Sbjct: 490 NKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLD 549
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ + M K+G K Y+ ++ GL N+ +EA+++ ++ + P S+
Sbjct: 550 EAFMFMDEM--VKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSV 607
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C E+ ++ FD+M+ PN V+Y+ LI AYC+ R+ A EL ++M G
Sbjct: 608 MIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKG 667
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P ++T+ +++ G+ V A KL+ E+MR G P HY+ LI + G
Sbjct: 668 ISPNSATYTSLIKGMSIISRVEEA-KLLLEEMR--MEGLEPNVFHYTALIDGYGKLGQMV 724
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
LL +M K + P+ +T+ ++
Sbjct: 725 KVECLLREMHSKNVHPNKITYTVMI 749
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 216/509 (42%), Gaps = 67/509 (13%)
Query: 42 MTPSLKIFNSILDVLVK--EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
M PS N +L LV+ E AF+ ++ GV D Y + + C +V +
Sbjct: 214 MFPSKTTCNILLTSLVRATEFQKCCEAFH---VVCKGVSPDVYLFTTAINAFCKGGKVEE 270
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILIC 155
+L M+ GV PN V YNT+I L +G+ A M EP +T+SIL+
Sbjct: 271 AIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVK 330
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
K + + +A +L++ GF P+V+ +++ L G + A+EI + +G
Sbjct: 331 GLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSL 390
Query: 213 ----RLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+KG C R LKEM G N ++ +I C + DSAL
Sbjct: 391 TSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFV 450
Query: 260 NDMKIDGIS-------------------------W----------NFVTYDTLIRGLCSG 284
+M + +S W + T + L+ GLC
Sbjct: 451 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA 510
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G++++G +I + E G YN+++ G + DEA ++ +M K L P
Sbjct: 511 GKLEEGFRIQK--EILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNY 568
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
S+ I G VE+A + + G +P+V Y +I C+ ER E +L EM
Sbjct: 569 TYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEM 628
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+ P +N ++ CR G + AL+L EDM+ +G P S Y+ LIK +
Sbjct: 629 MSNNLQPNTVVYNHLIGAYCRSGRLSMALEL-REDMK--HKGISPNSATYTSLIKGMSII 685
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +LL +M +G+ P+ + +L+
Sbjct: 686 SRVEEAKLLLEEMRMEGLEPNVFHYTALI 714
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 195/436 (44%), Gaps = 32/436 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
T IL+ L + HV+ +GV P+ ++ T I++ CK GKV A L S M
Sbjct: 220 TCNILLTSLVRATEFQKCCEAFHVV-CKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKM 278
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
EE PN VT++ +I A + EK G P ++T + +++ L R+
Sbjct: 279 EEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRI 338
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
DA +L KEM KG PNV YN LI S E G L+ A+++
Sbjct: 339 GDAYCVL-------------------KEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEI 379
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+ M G+S TY+TLI+G C G+ D ++L+ M G + SV+ L
Sbjct: 380 KDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSI--GFNVNQGSFTSVICLL 437
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ D AL ++ +M + P + I G C G A + + + +G + +
Sbjct: 438 CSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDT 497
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ L+H C+ ++ E + KE+ G G++ ++NT++SG C + A ++E
Sbjct: 498 KTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDE 557
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLS 495
++ +G P + YS LI+ L + A G++PD T++ ++ C
Sbjct: 558 MVK---KGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCK 614
Query: 496 QQTTWLLLLLLNEMVS 511
+ T L +EM+S
Sbjct: 615 AERTEEGQKLFDEMMS 630
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 179/438 (40%), Gaps = 58/438 (13%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
SI ++ F +VI L M + ++ + NM+P + +++ L K
Sbjct: 420 SIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 479
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
K + G D T L+ GLC ++ +GF++ + RG + V YNTLI
Sbjct: 480 KAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLI 539
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
C N K+ A M +M + P++ T+SILI + A+ G +
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMI 599
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PDV T + +++ C R E+G+ + EM PN Y
Sbjct: 600 PDVYTYSVMIDGCCKAERT-----------EEGQ--------KLFDEMMSNNLQPNTVVY 640
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI +YC +G L AL++ DMK GIS N TY +LI+G+ R+++ +L+ M
Sbjct: 641 NHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEM-- 698
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
+ME L P + I G+ G +
Sbjct: 699 ---------------------------------RMEGLEPNVFHYTALIDGYGKLGQMVK 725
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
+ +M + PN + Y +I Y ++ V EAS L+ EM G +P + T+ +
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIY 785
Query: 420 GLCRQGNVGTALKLVEED 437
G +QG V A K +E+
Sbjct: 786 GYLKQGGVLQAFKGSDEE 803
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 129/513 (25%), Positives = 228/513 (44%), Gaps = 30/513 (5%)
Query: 3 HSIQSPPDESIFITVIRGL----GRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLV 57
H++ PP +F R L R + +++ + P+ +N+++ L
Sbjct: 81 HALSPPPLRPLFDRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALC 140
Query: 58 KEDIDLARA-FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
+ DL A Y M+ SG + D +T+ L+ G C T ++ L M RG ++
Sbjct: 141 RR-ADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDA 199
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
V Y LI C+ G+V A L ++E+P+ T + L+ C L +L+K
Sbjct: 200 VSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKEL 259
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G+ P +++L C + +A ++L E + G R G++ G
Sbjct: 260 GWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGA 319
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
R + M+ KGC PNV TYN ++ +C G + A+ + + M+ G+ + VTY+ LIRG
Sbjct: 320 VRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
C G I+ ++L+LME + G YN ++ L + + DEA +E +
Sbjct: 380 QCIDGHIESAFRLLRLMEGN--GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIR 437
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P +V + I G C G + A ++M+ G P+ Y I C+ + RE
Sbjct: 438 PNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSF 497
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ EM P + V+ L ++ N G A ++ + + G P Y+ ++A
Sbjct: 498 IDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQ---MVSLGCSPDVVTYTTSVRA 554
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C +G A ++++M GI+ D + +N+L+
Sbjct: 555 YCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 180/414 (43%), Gaps = 54/414 (13%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M GV+ D TY +L++G C+ + F+LL +M+ G+ + YN LI +LCK G
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A SL +E PN VTF+ +I CK A LEK S G PD T +
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYS 479
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG-------------RLGKVKG---GCRFLKEMERK 230
+E LC + + ++E ++ RL K + R +M
Sbjct: 480 PFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSL 539
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC P+V TY + +YC G L A +V +MK GI + + Y+TLI G S G+ D
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLY---------------------GLYRENQQDEALE 329
+ IL+ M G S N + +++ + + E
Sbjct: 600 VTILKHM-------TGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFE 652
Query: 330 YLKQMEK-LFPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+ M+K P + L IL GF + +++ M E+ N IY L++ +C
Sbjct: 653 LFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFC 712
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+ +A L+ M GHG+LP ++ +LSG +G A +E RG+
Sbjct: 713 KLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRA----KEIFRGL 762
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
TF ++L+ R L+L M G + P Y+ LI+ALC + + A L
Sbjct: 95 TFRSLLTHFSRYALTPLMLRLFAH-MYHHGPPA-PTGATYNALIRALCRRADLRHAQRYL 152
Query: 473 VQMVGKGILPDYLTWNSLLI--CLSQQ 497
MV G PD T+NSL++ C +QQ
Sbjct: 153 SLMVRSGWRPDAFTFNSLILGYCRTQQ 179
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 232/501 (46%), Gaps = 37/501 (7%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
L+ R TPSL FN +L L K + + Y + M SG+ D T IL+ LC
Sbjct: 59 LMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQ-MRLSGLSSDRCTLNILLNCLCNV 117
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
NR+ +GF + RG PN V YNTLI LC ++ A L M++ P+ VT+
Sbjct: 118 NRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTY 177
Query: 151 SILICAYCKEENLVNALVLLEK------SFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
LI C N+ AL L ++ + P+V+T +++ LC VGR +A ++
Sbjct: 178 GTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQL 237
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
EE QG + EM +G P++ T+N+LI + C+ G + A + M
Sbjct: 238 FEEMKTQGMIP---------NEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 288
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
GI + VTY++LI G C G ++ ++ M +G + + YN ++ G + +
Sbjct: 289 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM--PSKGCEPDVISYNVLINGYSKTLKV 346
Query: 325 DEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+EA++ +M + P + + G + G V+DAK+ F M G N Y
Sbjct: 347 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 406
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ C+ + + EA +L E+ + N ++ GLC+ G + TA +L E +
Sbjct: 407 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE---KLSN 463
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL 502
G P Y+ +I C +G A++L+ +M G PD +T+N+L+ +
Sbjct: 464 EGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYES----- 518
Query: 503 LLLLNEMVSFVMVVHELSAKE 523
N++ V ++H ++ K+
Sbjct: 519 ----NKLEEVVQLLHRMAQKD 535
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 169/400 (42%), Gaps = 46/400 (11%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSL------MSDMEEPNDVTFSILICAYCKEENLVNAL 167
PN I L H CK G V +L M P+ +F+ L+ K ++
Sbjct: 32 PNPQIAFFLRH--CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVF 89
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
L + G D T+ +L LC+V R+ + G +
Sbjct: 90 SLYNQMRLSGLSSDRCTLNILLNCLCNVNRL-------------------REGFAAFAGI 130
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R+G PN+ TYN LI C + A +F M+ G + + VTY TLI+GLC G I
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190
Query: 288 DDGLKILQLMEDS----KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK------- 336
+ LK+ Q M + + K + YN ++ GL + ++DEA + ++M+
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNE 250
Query: 337 -----LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
L P V ++ I C +G V +AK+ MIE G VP++V Y+ LI +C
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ A EL M G P ++N +++G + V A+KL E M +G+ P
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE-MLLVGKR--PNVIT 367
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y L+K + G A L M GI + T+ L
Sbjct: 368 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFL 407
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 180/411 (43%), Gaps = 79/411 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVK----ATDLVSRF--NMTPSLKIFNSILDVLVKEDI- 61
PD + T+I+GL IN +K + +SR+ N P++ +N I+D L K
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231
Query: 62 DLARAFYRK---------KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV 112
D A+ + + +M+ G+Q D T+ +L+ LC +V + KLL VM G+
Sbjct: 232 DEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 291
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALV 168
P+ V YN+LI C G + AR L M EP+ +++++LI Y K + A+
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 351
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------- 212
L + G P+V+T +L+ + G+V DA ++ G
Sbjct: 352 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLC 411
Query: 213 -----------------------------------RLGKVKGGCRFLKEMERKGCLPNVD 237
+ GK++ +++ +G PNV
Sbjct: 412 KNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVV 471
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY I+I +C G +D A + M+ +G + + +TY+TL+RG ++++ +++L M
Sbjct: 472 TYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRM 531
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP--RAVDRSL 346
K+ S I+ + V+ L ++ + E L L + FP + VD+ L
Sbjct: 532 AQ-KDVSPDAIT-CSIVVDMLSKDEKYQECLHLLPR----FPIQKGVDKHL 576
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 230/492 (46%), Gaps = 27/492 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
+PH P+ + ++ G + M+ + D + R +L+ +N L L++
Sbjct: 286 LPH-----PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNG 340
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
L K+M+ G++ D Y+Y I+M GLC + D L+ +M G+ P++V Y+
Sbjct: 341 KLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYS 400
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TL+H C GKV A +L+ +M PN T ++L+ + KE + A LL+K
Sbjct: 401 TLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEK 460
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL----KEMERKGC 232
G+ D VT ++ LC+ G++ A+EI+ G G F+ + K C
Sbjct: 461 GYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKC 520
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P++ TY+ +IS C+ G LD A F +M G+ + YDT I C G+I +
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQ 580
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+L+ ME K G + YNS++ GL +NQ E + +M + + P + +
Sbjct: 581 VLKDME--KRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNC 638
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---ERVREASELMKEMTGHGY 407
C G + DA D+M+++G PN+ + LI A+C+ + E E+ + GH
Sbjct: 639 LCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKE 698
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
FN +L G G V A +L E + R G+ Y LI LC+ ++
Sbjct: 699 ALYTLMFNELLVG----GKVAEAKELFET---ALDRSFDIGNFLYKDLIDRLCKDEKLEA 751
Query: 468 ASMLLVQMVGKG 479
AS +L +++ KG
Sbjct: 752 ASDVLHRLIDKG 763
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 235/525 (44%), Gaps = 56/525 (10%)
Query: 44 PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ ++N +L ++E+ ++L Y K M+ + V + YT+ +L+ LC + + D +
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLY-KDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
L M +RG +PN + L+ C+ G + L+ M PN+V ++ LI ++C
Sbjct: 169 LFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFC 228
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
KE +A L++K G VP V T + LC G++++A I + LG
Sbjct: 229 KEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPH 288
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
PNV TY +++ +C+ G+L+ A + + MK + N +Y+ +
Sbjct: 289 ---------------PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWL 333
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GL G++ + +L+ M G + I YN V+ GL + +A + M +
Sbjct: 334 LGLIRNGKLLEAWIVLKEMLGI--GIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNG 391
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P V S + G+C G V +A +MI PN + L+H+ +E R+ EA
Sbjct: 392 ILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAE 451
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH----- 451
L+++M GY T N +++ LC G + A+++V M G +L G+
Sbjct: 452 NLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIV-NGMWTHGSAALGNLGNSFIGL 510
Query: 452 ----------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
YS +I LC+ G A ++M+ KG+ PD +++ +
Sbjct: 511 VDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFC 570
Query: 496 QQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGS 540
++ ++ S V+ ++ + L++ N L G GS
Sbjct: 571 RE---------GKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGS 606
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 146/533 (27%), Positives = 243/533 (45%), Gaps = 87/533 (16%)
Query: 42 MTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P FN ++ +L ++ AR + KM A G + +++T+ IL++G C G
Sbjct: 143 VSPEAYTFNLLIGLLCDSGHLEDARELF-DKMPARGCEPNEFTFGILVRGYCRAGLASKG 201
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+LL M++ G+ PN+V+YNTLI S CK GK A L+ M E P+ TF+ I A
Sbjct: 202 LELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISA 261
Query: 157 YCKEENLVNALVL---LEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILE------ 206
C ++ A + ++ G P+V+T +L C G + +A +++
Sbjct: 262 LCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNA 321
Query: 207 -----ESGEQGRLGKVKGGCRF-----LKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
ES LG ++ G LKEM G P++ +YNI++ C+ G+L A
Sbjct: 322 NFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDAR 381
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG------------- 303
+ M +GI + VTY TL+ G CS G++ + +L M +
Sbjct: 382 MLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSL 441
Query: 304 -SKGRISPYNSVL-------YG------------LYRENQQDEALEYLKQM--------- 334
+GRIS ++L YG L Q D+A+E + M
Sbjct: 442 WKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALG 501
Query: 335 ----------------EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+K P V S I G C G ++DAK+ F +M+ +G P+ I
Sbjct: 502 NLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAI 561
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
YD IH++C+E ++ A +++K+M G T+N+++ GL + + L++E M
Sbjct: 562 YDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDE-M 620
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R +G P Y+ ++ LCE G A +L +M+ KGI P+ ++ L+
Sbjct: 621 R--EKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILI 671
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM- 334
L+ L G + + + + + + I YN +L REN+ + K M
Sbjct: 80 NLVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMV 139
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
++ P A +L I C G++EDA+ FD+M G PN + L+ YC+
Sbjct: 140 LARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLAS 199
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+ EL+ +M G LP +NT++S C++G A KLV++ MR G +P ++
Sbjct: 200 KGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDK-MR--EDGLVPHVETFN 256
Query: 454 PLIKALCEKGGFQSASMLLVQM 475
I ALC G AS + M
Sbjct: 257 SRISALCGSGKILEASRIFRDM 278
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/524 (25%), Positives = 234/524 (44%), Gaps = 63/524 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+E + +I GL +++ + + + P+++ + I+ L + +
Sbjct: 38 NEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLF 97
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M G + + +TY +++ +C ++ +G ++L M +G+ P+ YN LI CK
Sbjct: 98 SEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKE 157
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G V A+ ++ M PN+ T++ LIC +C+++N+ A+ LL K P VVT
Sbjct: 158 GMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTY 217
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ C +G + A R L M G +P+ TY++ I +
Sbjct: 218 NSLIHGQCKIGYLDSAY-------------------RLLNLMNENGVVPDQWTYSVFIDT 258
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ--LMEDSKEG 303
C+ G ++ A +FN +K GI N V Y LI G C G++DD +L L ED
Sbjct: 259 LCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPN 318
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
S S YN+++ GL +E + EAL ++ M + L ++ I+ +G+ + A
Sbjct: 319 S----STYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R DQM+ G P+V IY IHA+C ++EA ++M M G +P A T+ V+
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK--------------ALCEK----- 462
G + A +++ R G P YS LIK ALC+
Sbjct: 435 GGLGLLNPAFDVLK---RMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVF 491
Query: 463 ----------GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
F++A L +M+ G P+ T+ L+I L +
Sbjct: 492 FADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCK 535
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 200/409 (48%), Gaps = 38/409 (9%)
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
L N V F + ++M +G + N V Y LIH LC+ G+V ++ M E P
Sbjct: 16 LNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVR 75
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+++++ A + + A+ L + G P++ T T ++ +C E
Sbjct: 76 TYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCK-----------ETK 124
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
E+GR R L EM KG +P+V TYN LI YC+ G++++A ++ + M + +
Sbjct: 125 LEEGR--------RILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCN 176
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQ 324
N TY+ LI G C + + +L M +S R++P YNS+++G +
Sbjct: 177 PNERTYNELICGFCRKKNVHRAMALLSKMLES------RLTPSVVTYNSLIHGQCKIGYL 230
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D A L M + + P S+ I C G +E+A F+ + E+G N VIY L
Sbjct: 231 DSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTAL 290
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I YC+ ++ +A+ L+ M LP +ST+N ++ GLC++ V AL L+E ++
Sbjct: 291 IDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGL 350
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ ++P Y+ LI A+ ++G F A +L QMV G PD + + +
Sbjct: 351 KCTVPT---YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFI 396
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 203/445 (45%), Gaps = 55/445 (12%)
Query: 62 DLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
D+ AF MM G + ++ +Y L+ GLC RV +G + M+ P Y
Sbjct: 19 DVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYT 78
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
++H+L ++G+ A +L S+M EPN T++++I A CKE L +L++
Sbjct: 79 VIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VP V T +++ C G V A EIL+ M C PN
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILD-------------------LMHSNSCNPNE 179
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN LI +C + A+ + + M ++ + VTY++LI G C G +D ++L L
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239
Query: 297 MEDS--------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
M ++ KGRI N VL+ +E +K E ++ +
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEAN-VLFNSLKEKG-------IKANEVIYTALI 291
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
D G+C G ++DA D+M+ E +PN Y+ LI C+E +V+EA LM+ M
Sbjct: 292 D------GYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G T+ ++ + ++G+ A +++++ + G P Y+ I A C +
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQ---MVSSGYQPDVYIYTAFIHAFCTR 402
Query: 463 GGFQSASMLLVQMVGKGILPDYLTW 487
G + A ++ M +G++PD LT+
Sbjct: 403 GNIKEAEDMMSMMFERGVMPDALTY 427
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 222/500 (44%), Gaps = 46/500 (9%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE 59
HS P+E + +I G R + +V +A L+S+ +TPS+ +NS++ K
Sbjct: 171 HSNSCNPNERTYNELICGFCRKK---NVHRAMALLSKMLESRLTPSVVTYNSLIHGQCK- 226
Query: 60 DIDLARAFYR--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
I + YR M +GV D +TY++ + LC R+ + L + +K +G+K N V
Sbjct: 227 -IGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
IY LI CK GK+ A SL+ M PN T++ LI CKE + AL+L+E
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G V T T ++ V +L+E G R L +M G
Sbjct: 346 IQKGLKCTVPTYTILI------------VAMLKE-------GDFDYAHRILDQMVSSGYQ 386
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+V Y I ++C G + A D+ + M G+ + +TY +I G ++ +
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRE--NQQDEALEYLKQMEKLFPRAVDRSLKILGF 351
L+ M D+ G Y+ ++ L +E ++ + + + +F V K++ F
Sbjct: 447 LKRMFDT--GCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKF 504
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
E A F++M+E G PN+ Y LI C+ R+ A +L M G P
Sbjct: 505 ------ETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSE 558
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+ +N++L+ C G G A++LV M G LP + L L E+G + A ++
Sbjct: 559 AIYNSLLNCCCELGIYGDAVRLVGAMME---HGHLPLLESLNVLFCGLYEEGSKEKAKVV 615
Query: 472 LVQMVGKGILPDYLTWNSLL 491
++ G D + W L+
Sbjct: 616 FSNLLQCGYNDDEVAWKILI 635
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 211/524 (40%), Gaps = 59/524 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I + + + + + D + + PS+ +N+++D KE + A
Sbjct: 107 PNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEI 166
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M ++ ++ TY L+ G C V LL M + P+ V YN+LIH CK
Sbjct: 167 LDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCK 226
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L++ M E P+ T+S+ I CK+ + A VL G + V
Sbjct: 227 IGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVI 286
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C G++ DA +L+ R L E CLPN TYN LI
Sbjct: 287 YTALIDGYCKAGKMDDANSLLD---------------RMLTE----DCLPNSSTYNALID 327
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ + AL + M G+ TY LI + G D +IL M S G
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS--GY 385
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ + Y + ++ EA + + M + P A+ +L I + G + A
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEE-----------------------------RVR 393
+M + G P+ Y CLI +EE +
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFE 505
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
A EL ++M HG P +T+ ++ GLC+ G +G A KL + RG P Y+
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNE---RGVSPSEAIYN 562
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ CE G + A L+ M+ G LP + N L L ++
Sbjct: 563 SLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEE 606
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Query: 242 LISSYCETGVL---------DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+++ YC+ G L +SA VFN M G N V+Y LI GLC GR+D+G+
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
I + M + + + Y +++ L+ ++ EA+ +M + P ++ I
Sbjct: 61 IFKKMRE--DDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINA 118
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C + +E+ +R D+M+E+G VP+V Y+ LI YC+E V A E++ M + P
Sbjct: 119 MCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPN 178
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+N ++ G CR+ NV A+ L+ + + P Y+ LI C+ G SA
Sbjct: 179 ERTYNELICGFCRKKNVHRAMALLSKMLES---RLTPSVVTYNSLIHGQCKIGYLDSAYR 235
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQ 497
LL M G++PD T++ + L ++
Sbjct: 236 LLNLMNENGVVPDQWTYSVFIDTLCKK 262
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 148/360 (41%), Gaps = 53/360 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ S + +I GL + R + + + + + + + ++ + ++ ++KE D D A
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M++SG Q D Y Y + C + + ++ +M RGV P+++ Y +I +
Sbjct: 377 L-DQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEE---------------------- 161
G + A ++ M + P+ T+S LI KEE
Sbjct: 436 GLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADV 495
Query: 162 -------NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-- 212
AL L EK G P++ T K++ LC VGR+ A ++ + E+G
Sbjct: 496 ADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVS 555
Query: 213 --------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
LG R + M G LP +++ N+L E G + A V
Sbjct: 556 PSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVV 615
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
F+++ G + + V + LI GL G D ++L +ME G + Y ++ GL
Sbjct: 616 FSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVME--ARGCQIHPQTYRMLIEGL 673
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 222/485 (45%), Gaps = 49/485 (10%)
Query: 28 NDVVKATDLVSRF---NMTPSLKIFNSILDVLVK----------------EDIDLARAFY 68
NDVV A L SR N TP FN IL LVK E I+ +
Sbjct: 55 NDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHF 114
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ G + T+ L+KGLCL ++ + + G + + V Y TLIH LCK
Sbjct: 115 QHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCK 174
Query: 129 NGKVGRARSLM----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ A L+ ++ +PN V +S +I CK++++ +A L + S G P+VVT
Sbjct: 175 VGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 234
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ +VG++ DA+++ + M + P+V T+NIL+
Sbjct: 235 YSALISGFFTVGQLKDAIDLFNK-------------------MILENIKPDVYTFNILVD 275
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ G + VF M GI N VTY +L+ G C ++ IL M S+ G
Sbjct: 276 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTM--SQRGV 333
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN ++ G + + DEA+ K+M + + P V + I G C G + A +
Sbjct: 334 NPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALK 393
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
D+M + G P+++ Y ++ A C+ +V +A L+ ++ G P T+ ++ GLC
Sbjct: 394 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLC 453
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ G + A + E+ + +G Y+ +I C KG F A LL +M +P
Sbjct: 454 KGGRLEDAHNIFEDLLV---KGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510
Query: 483 DYLTW 487
D +T+
Sbjct: 511 DAVTY 515
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 187/375 (49%), Gaps = 40/375 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
P+ ++ T+I G+ + + +ND +++VS+ ++P++ +++++ +K+ ID
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSK-GISPNVVTYSALISGFFTVGQLKDAID 253
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L KM+ ++ D YT+ IL+ G C ++ +G + +M +G+KPN V Y +L
Sbjct: 254 LFN-----KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 308
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ C +V +A+S++ M + P+ +++ILI +CK + + A+ L ++
Sbjct: 309 MDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 368
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
+PDVVT +++ LC +LGK+ + + EM +G P++ T
Sbjct: 369 IPDVVTYNSLIDGLC-------------------KLGKISYALKLVDEMHDRGVPPDIIT 409
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y+ ++ + C+ +D A+ + +K GI N TY LI GLC GGR++D I + +
Sbjct: 410 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDL- 468
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGN 356
+G ++ Y +++G + DEAL L +M+ P AV + I+ D +
Sbjct: 469 -LVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEI-IIRSLFDKD 526
Query: 357 VEDAKRCFDQMIEEG 371
D +MI G
Sbjct: 527 ENDKAEKLREMITRG 541
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 186/418 (44%), Gaps = 47/418 (11%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP--NDVTFS 151
N V D F L + + P ++ +N ++ SL K+ SL ME N V F
Sbjct: 54 NNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFH 113
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+ L+ G+ P+ +T T +++ LC G++ A+ +
Sbjct: 114 -----FQHPHQLM------------GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAM 156
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G ++++ G Y LI C+ G +ALD+ + + + N
Sbjct: 157 GF------------QLDQVG-------YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNV 197
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
V Y T+I G+C ++D + M +G + Y++++ G + Q +A++
Sbjct: 198 VMYSTIIDGMCKDKHVNDAFDLYSEM--VSKGISPNVVTYSALISGFFTVGQLKDAIDLF 255
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M E + P ++ + GFC DG +++ K F M+++G PNVV Y L+ YC
Sbjct: 256 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 315
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+ V +A ++ M+ G P ++N ++ G C+ V A+ L +E + +P
Sbjct: 316 KEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH---KHIIPDV 372
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
Y+ LI LC+ G A L+ +M +G+ PD +T++S+L +C + Q + LL
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 430
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 225/494 (45%), Gaps = 38/494 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP + F ++ + + + + V+ + + F + P++ N +L+ L
Sbjct: 53 MHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLN----ILINSFCHLQ 108
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G Q + T+ L++GLC+ ++G+ L M G +PN V Y
Sbjct: 109 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 168
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ ME+ P+ V ++ +I + CK+ + A L +
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 228
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P + T ++ LC+ L + K L EM +PNV
Sbjct: 229 GISPSIFTYNSLIHALCN-------------------LCEWKHVTALLNEMVNSKIMPNV 269
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
++ ++ + C+ G + A DV + M G+ N VTY+ L+ G C +D+ +K+
Sbjct: 270 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT 329
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M +G + Y++++ G + + ++A+ ++M ++L P V S + G C
Sbjct: 330 M--VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 387
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++DA F +M+ G +P+ V Y L+ C+ R+ EA L+K + G P +
Sbjct: 388 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 447
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
V+ G+CR G + A L +G P Y+ +I LC++G AS L +
Sbjct: 448 TIVIDGMCRAGELEAARDLFSNLS---SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 504
Query: 475 MVGKGILPDYLTWN 488
M KG P+ T+N
Sbjct: 505 MKRKGYSPNGCTYN 518
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 222/477 (46%), Gaps = 36/477 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + F T+IRGL I +V+ D + P++ + ++++ L K A
Sbjct: 127 PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL 186
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M Q D Y ++ LC +V F L M +G+ P+ YN+LIH+LC
Sbjct: 187 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 246
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +L+++M PN V FS ++ A CKE ++ A +++ G P+VVT
Sbjct: 247 LCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 306
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C + +AV++ + M KG P+V +Y+ LI+
Sbjct: 307 YNALMDGHCLRSEMDEAVKVFD-------------------TMVCKGFAPDVVSYSTLIN 347
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ ++ A+ +F +M + N VTY TL+ GLC GR+ D + + M +
Sbjct: 348 GYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV-----T 402
Query: 305 KGRISPYNS---VLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVED 359
+G+I + S +L L + + DEA+ LK +E + P ++ I G C G +E
Sbjct: 403 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 462
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A+ F + +G PNV Y +I+ CQ+ + EAS+L EM GY P T+N +
Sbjct: 463 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITR 522
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
G R ++L++E + RG + L++ L + G QS +L + +
Sbjct: 523 GFLRNNETLRGIQLLQE---MLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/503 (26%), Positives = 234/503 (46%), Gaps = 29/503 (5%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + +I+GL A+ + + ++ R +P+++ F ++ L K + AR +
Sbjct: 137 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M +GV TY ++ G R+ D K+ +M+ G P+ YNTLI+ LC
Sbjct: 197 -DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC- 254
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K A L+++ + P VTF+ LI YC E +AL + K S D+
Sbjct: 255 DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
K++ L R+ +A E+L E G + GKV LK ME
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMME 374
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R GC PN TYN L+ + L A+ + M+ DGI N +TY TL++G C D
Sbjct: 375 RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFD 434
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ ++ ++ME + G K Y + L + + +EA ++ + + +L I
Sbjct: 435 NAFRLFEMME--QNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTL-I 491
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF GN + A ++MI+EG P+ Y L+HA C+++R+ EA ++ +M+ G
Sbjct: 492 DGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIK 551
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ ++ + R+G A ++ E G P + Y+ I + C++G + A
Sbjct: 552 CTIFAYTILIDEMLREGKHDHAKRMYNE---MTSSGHKPSATTYTVFINSYCKEGRLEDA 608
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L+++M +G+ PD +T+N L+
Sbjct: 609 EDLILKMEREGVAPDVVTYNILI 631
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 205/427 (48%), Gaps = 31/427 (7%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Q ++Y+Y IL++GLC V L +MK G PN + LI LCK+G+VG A
Sbjct: 133 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDA 192
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R L M + P+ +T++ +I Y K + +AL + E G PD T ++
Sbjct: 193 RLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYG 252
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMERKGCLPN 235
LC + +A E+L + ++G V G C R +M C +
Sbjct: 253 LCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLD 311
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ + LI+S + L A ++ N++ +G+ N +TY ++I G C G++D L++L+
Sbjct: 312 LQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLK 371
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
+ME ++G + YNS++YGL ++ + +A+ L +M+K + P + + + G C
Sbjct: 372 MME--RDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCD 429
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+ + ++A R F+ M + G P+ Y L A C+ R EA + G
Sbjct: 430 EHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVY 486
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ T++ G + GN A L+E R I G P S YS L+ ALC++ A +L
Sbjct: 487 YTTLIDGFSKAGNTDFAATLIE---RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILD 543
Query: 474 QMVGKGI 480
QM +GI
Sbjct: 544 QMSLRGI 550
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 204/452 (45%), Gaps = 35/452 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + ++I G ++ ++ ++ ++ R P+ +NS++ LVK D L +A
Sbjct: 345 PNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK-DKKLHKAMA 403
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G+ + TY L++G C + + F+L +M+ G+KP+ Y L +LC
Sbjct: 404 LLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALC 463
Query: 128 KNGKVGRARSLMSDMEEP-NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K G+ A S + V ++ LI + K N A L+E+ G PD T +
Sbjct: 464 KAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYS 523
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+L LC R+ +A+ IL++ +G R GK R EM
Sbjct: 524 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 583
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TY + I+SYC+ G L+ A D+ M+ +G++ + VTY+ LI G G ID
Sbjct: 584 GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRA 643
Query: 291 LKILQLMEDS-------------KEGSKGRISPYNSV-LYGLYRENQQDEALEYLKQMEK 336
L+ M + K KG ++ SV G++ + D + L++M K
Sbjct: 644 FSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 703
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P S I GFC G +E+A D M +G PN IY LI C + +
Sbjct: 704 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 763
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
A + M+ G+ P ++ ++ GLC +G+
Sbjct: 764 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGD 795
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/574 (24%), Positives = 242/574 (42%), Gaps = 105/574 (18%)
Query: 9 PDESIFITVIRGLGRAR------MINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDI 61
PD+ + T+I GL + ++N+ VK TP++ F ++++ + E
Sbjct: 241 PDDWTYNTLIYGLCDQKTEEAEELLNNAVKE-------GFTPTVVTFTNLINGYCMAEKF 293
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A + KMM+S + D + L+ L +R+ + +LL+ + + G+ PN + Y +
Sbjct: 294 DDALRM-KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 352
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I CK+GKV A ++ ME +PN T++ L+ K++ L A+ LL K G
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 412
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+P+V+T T +L+ C +A R + ME+ G P+
Sbjct: 413 IIPNVITYTTLLQGQCDEHDFDNAF-------------------RLFEMMEQNGLKPDEH 453
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
Y +L + C+ G A + ++ + G++ V Y TLI G G D +++ M
Sbjct: 454 AYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD--- 354
D EG Y+ +L+ L ++ + +EAL L QM R + ++ +D
Sbjct: 511 ID--EGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS---LRGIKCTIFAYTILIDEML 565
Query: 355 --GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G + AKR +++M G P+ Y I++YC+E R+ +A +L+ +M G P
Sbjct: 566 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 625
Query: 413 TFNTVLSGLCRQGNVGTAL----------------------------------------- 431
T+N ++ G G + A
Sbjct: 626 TYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGM 685
Query: 432 -KLVEEDM------RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
L+E D+ R + G P YS LI C+ G + A +LL M GKG+ P+
Sbjct: 686 WNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNE 745
Query: 485 LTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHE 518
+ L+ C + +SFV ++ E
Sbjct: 746 DIYTLLIKCCCDTK------FFEKALSFVSIMSE 773
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 230/525 (43%), Gaps = 42/525 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G A +D ++ + + L++F +++ L+K+D
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ A+G+ + TY ++ G C + +V ++L +M+ G +PN+ YN+L++ L K
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ +A +L++ M++ PN +T++ L+ C E + NA L E G PD
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKGGCRFLKEMERKG 231
+ + LC GR +A + G + G ++ M +G
Sbjct: 455 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 514
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C P+ TY++L+ + C+ L+ AL + + M + GI Y LI + G+ D
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++ M S G K + Y + +E + ++A + + +ME+ + P V ++ I
Sbjct: 575 RMYNEMTSS--GHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 632
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---ERVREAS---------- 396
G G ++ A +M+ PN Y CL+ + + VR
Sbjct: 633 GCGHMGYIDRAFSTLKRMVGASCEPNYWTY-CLLLKHLLKGNLAYVRSVDTSGMWNLIEL 691
Query: 397 ----ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+L++ M HG P +T++++++G C+ G + A L++ G+G P Y
Sbjct: 692 DITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLD---HMCGKGLSPNEDIY 748
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ LIK C+ F+ A + M G P ++ L++ L +
Sbjct: 749 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNE 793
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 178/417 (42%), Gaps = 72/417 (17%)
Query: 119 YNTLIHSLCK---NGKVGRARS-LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSF 174
YN + SL + +GR S L+ D P+ VT++ +I +YCKE +L A
Sbjct: 36 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G P+ T ++ C R G+++ C M GC
Sbjct: 96 EGGLEPETFTCNALVLGYC-------------------RTGELRKACWLFLMMPLMGCQR 136
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N +Y ILI C+ + AL +F MK DG S N + LI GLC GR+ D +
Sbjct: 137 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
M + G + YN+++ G + + ++AL+ + MEK P + I G C
Sbjct: 197 DAM--PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 254
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE---------------------- 390
D E+A+ + ++EG P VV + LI+ YC E
Sbjct: 255 -DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 313
Query: 391 -------------RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLV 434
R++EA EL+ E++ +G +P T+ +++ G C+ G V A LK++
Sbjct: 314 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 373
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E D G P + Y+ L+ L + A LL +M GI+P+ +T+ +LL
Sbjct: 374 ERD------GCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLL 424
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 10/263 (3%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN + S + + V++ + DG+ + VTY+T+I+ C G + + +L+
Sbjct: 36 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLL 95
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
+ G + N+++ G R + +A M + + + S IL G C
Sbjct: 96 EG--GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKC 153
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V A F M +G PNV + LI C+ RV +A L M +G +P T+N
Sbjct: 154 VRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNA 213
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G + G + ALK+ E + G P Y+ LI LC++ + A LL V
Sbjct: 214 MIVGYSKLGRMNDALKIKELMEKN---GCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAV 269
Query: 477 GKGILPDYLTWNSLL--ICLSQQ 497
+G P +T+ +L+ C++++
Sbjct: 270 KEGFTPTVVTFTNLINGYCMAEK 292
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 36/423 (8%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G Q D +YA L+ GLC KLL +++ R +PN V+YNT+I LC
Sbjct: 102 FHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLC 161
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A L S+M+ PN +T+S LI +C L+ A LL + P+V
Sbjct: 162 KDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVY 221
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +++ LC + GKVK L M ++G PNV +YN L+
Sbjct: 222 TYTILMDALC-------------------KEGKVKEAKNLLAVMTKEGVKPNVVSYNTLM 262
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G + +A +F+ M G++ N +Y+ +I LC R+D+ + +L+ E +
Sbjct: 263 DGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLR--EVLHKN 320
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GFCVDGNVEDAK 361
Y+S++ G + + AL+ LK+M + P V +L C + N++ A
Sbjct: 321 MVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M E G PN Y LI C+ R + A +L + + G T+N ++SGL
Sbjct: 381 ALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGL 440
Query: 422 CRQGNVGTALKL---VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C++G + AL + +EE+ G +P + + +I++L EK A LL +M+ K
Sbjct: 441 CKEGMLDEALAMKSKMEEN------GCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494
Query: 479 GIL 481
+L
Sbjct: 495 DLL 497
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 211/453 (46%), Gaps = 61/453 (13%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
TP + FN I+ LVK K+M G++ D +T IL+ C ++ F
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYC 158
+L + G +PN++ NTL+ LC G+V ++ +++ + + V+++ L+ C
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K +AL LL P+VV +++ LC V +A ++
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYS------------ 174
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
EM+ +G PNV TY+ LI +C G L A + N+M + I+ N TY L+
Sbjct: 175 -------EMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILM 227
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LC G++ + +L +M +KEG K + YN+++
Sbjct: 228 DALCKEGKVKEAKNLLAVM--TKEGVKPNVVSYNTLMD---------------------- 263
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
G+C+ G V++AK+ F M+++G PNV Y+ +I C+ +RV EA L
Sbjct: 264 -----------GYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++E+ +P T+++++ G C+ G + +AL L++E RG Y+ L+ A
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH---RGQPADVVTYTSLLDA 369
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ A+ L ++M +GI P+ T+ +L+
Sbjct: 370 LCKNQNLDKATALFMKMKERGIQPNKYTYTALI 402
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 202/406 (49%), Gaps = 37/406 (9%)
Query: 48 IFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
IFNS+L LV+ + + A F+ + + V+ D Y++ I++KG C + F+LL +
Sbjct: 130 IFNSLLGSLVRSNCFEKAWLFFNE--LKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGL 187
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEEN 162
++ G+ PN VIY TLI CKNG + RAR M E N TF++LI K+
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV----- 217
+ L EK G P++ T ++ C G++ A ++ +E E+G V
Sbjct: 248 KKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNT 307
Query: 218 --KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
G CR + +M++ PN+ TYN LI +C+ G LD A + + +K +G
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR-ISPYN---SVLYGLY-RE 321
+S + VTY+ LI G G + + ME GR ISP +VL Y R
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREME-------GRGISPSKVTCTVLIDAYVRL 420
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ ++A + MEK L P + I G C+ GN++++ + F M E P+ VIY
Sbjct: 421 QEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIY 480
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+ +IH YC+E+ A L++EM G +P +++++++ LC+ G
Sbjct: 481 NTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDG 526
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 184/395 (46%), Gaps = 26/395 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
F +I+G ++ + L+ ++P++ I+ +++D K DI+ AR F+ KM
Sbjct: 165 FGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF-DKM 223
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ + YT+ +L+ GL DGF L MK G+ PN YN L++ C GK+
Sbjct: 224 GEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKI 283
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
RA L +M E N VT++ LI C+EE + A L+++ P+++T +
Sbjct: 284 CRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTL 343
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ C VG + A +L++ G + G KG +EME +G
Sbjct: 344 IGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGI 403
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ T +LI +Y ++ A +++ M+ G+ + Y LI GLC G + + K
Sbjct: 404 SPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSK 463
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+ + M + I YN++++G +E+ AL L++ME L P S I
Sbjct: 464 LFRSMGEMHVEPSDVI--YNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGV 521
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
C DG E+A+ D+MIE P+ I + + A
Sbjct: 522 LCKDGKWEEAEVLLDKMIELQLKPSASILNMISKA 556
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 221/491 (45%), Gaps = 79/491 (16%)
Query: 41 NMTPSLK---IFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
N PS+ ++ SI++ +K + D A F+ + M+ G+ + L+ L +N
Sbjct: 85 NQNPSMTTALLYESIINAHLKSQLLDKALIFFNE-MVDKGLVFRPNIFNSLLGSLVRSNC 143
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
+ + +K R VK + + +I C+NG + ++ L+ +++ PN V ++
Sbjct: 144 FEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTT 202
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI CK ++ A + +K G V + T T ++ L G D ++ E+
Sbjct: 203 LIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEK----- 257
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
M+ G PN+ TYN L++ YC G + A D+F++M+ G+ N V
Sbjct: 258 --------------MKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVV 303
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEAL 328
TY+TLI G+C R+ + K++ M+ K +SP YN+++ G D+A
Sbjct: 304 TYNTLIGGMCREERVWEAEKLVDQMK------KAAVSPNLITYNTLIGGFCDVGNLDKAS 357
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGN------------------------------ 356
L Q++ L P V ++ I G+ GN
Sbjct: 358 SLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAY 417
Query: 357 -----VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+E A + + M + G VP+V +Y LIH C + ++E+S+L + M P
Sbjct: 418 VRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSD 477
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+NT++ G C++ N AL+L+ E M +G +P YS +I LC+ G ++ A +L
Sbjct: 478 VIYNTMIHGYCKEDNSYRALRLLRE-ME--AKGLVPNVASYSSIIGVLCKDGKWEEAEVL 534
Query: 472 LVQMVGKGILP 482
L +M+ + P
Sbjct: 535 LDKMIELQLKP 545
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 13/262 (4%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V ++ I+I CE G LD + + ++ G+S N V Y TLI G C G I+
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERA---- 216
Query: 295 QLMEDSKEGSKGRIS---PYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKIL 349
+L D K G G ++ + ++ GL+++ + + + ++M+ LFP + +
Sbjct: 217 RLFFD-KMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMN 275
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+C +G + A FD+M E G NVV Y+ LI C+EERV EA +L+ +M P
Sbjct: 276 EYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSP 335
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+NT++ G C GN+ A L+++ G P Y+ LI+ + G ++ +
Sbjct: 336 NLITYNTLIGGFCDVGNLDKASSLLDQLK---SNGLSPSLVTYNILIEGYSKAGNWKGVA 392
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L +M G+GI P +T L+
Sbjct: 393 DLAREMEGRGISPSKVTCTVLI 414
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 41/298 (13%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGI----------------------SWNFV---- 272
Y +I+++ ++ +LD AL FN+M G+ +W F
Sbjct: 96 YESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELK 155
Query: 273 --------TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
++ +I+G C G +D ++L L++D G + Y +++ G +
Sbjct: 156 ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDM--GLSPNVVIYTTLIDGCCKNGDI 213
Query: 325 DEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A + +M ++ A + +L G G +D F++M G PN+ Y+CL
Sbjct: 214 ERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCL 273
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
++ YC E ++ A +L EM G T+NT++ G+CR+ V A KLV++ +
Sbjct: 274 MNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA-- 331
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
P Y+ LI C+ G AS LL Q+ G+ P +T+N L+ S+ W
Sbjct: 332 -AVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNW 388
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 207/435 (47%), Gaps = 41/435 (9%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSL 126
++M G + +Y L+KG C NR + +LLH+M + R PN V YNT+I+
Sbjct: 155 RRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGF 214
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G+V +A +L DM + PN VT++I+I CK + + A + ++ G P++
Sbjct: 215 FTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNI 274
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T ++ S+G+ + V R LKEM G P+ TY +L
Sbjct: 275 VTYTCLIHGYLSIGQWKEVV-------------------RMLKEMSAHGLEPDCFTYGLL 315
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ C+ G A +F+ M GI + Y ++ G + G + + L LM +
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNG- 374
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
ISP +N V ++ EA++ +M + L P V+ + I C G
Sbjct: 375 -----ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V+DA+ F+QMI EG PN+V++ L++ C ++ +A EL EM G P FNT
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ LC +G V A +L++ R G+ P Y+ LI+ C G AS LL M+
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMER---VGTRPDIISYNALIRGHCLVGKTDEASKLLDIML 546
Query: 477 GKGILPDYLTWNSLL 491
G+ P+ T+N+LL
Sbjct: 547 SVGLKPNECTYNTLL 561
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 186/429 (43%), Gaps = 54/429 (12%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
S V D +TY+IL+ C R+ GF ++K+ + V+ N L+ LC +VG
Sbjct: 88 SKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVG 147
Query: 134 RARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
A VLL + G P+VV+ +L+ C
Sbjct: 148 EAMG------------------------------VLLRRMSELGCTPNVVSYNTLLKGFC 177
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
R +A+E+L + + + + C PN+ +YN +I+ + G +D
Sbjct: 178 DENRAEEALELLH----------------MMADGQVRSCPPNLVSYNTVINGFFTEGQVD 221
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A ++F DM GI N VTY +I GLC +D + Q M D +G + I Y
Sbjct: 222 KAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID--KGVRPNIVTYTC 279
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+++G Q E + LK+M L P L + C G +A++ FD MI +G
Sbjct: 280 LIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKG 339
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P+V IY ++H Y + + E + M G+G P FN V ++ +G A+
Sbjct: 340 IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAM 399
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + MR +G P +Y+ LI ALC+ G A + QM+ +G+ P+ + + SL+
Sbjct: 400 DIFNK-MRQ--QGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLV 456
Query: 492 ICLSQQTTW 500
L W
Sbjct: 457 YGLCTIDKW 465
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 191/428 (44%), Gaps = 27/428 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD SI+ ++ G ++++ DL+ ++P+ IFN + K+ +
Sbjct: 342 PDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDI 401
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+ + YA L+ LC RV D + M + GV PN V++ +L++ LC
Sbjct: 402 FNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCT 461
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K +A L +M PN V F+ ++C C E ++ A L++ G PD+++
Sbjct: 462 IDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIIS 521
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C VG+ +A ++L+ M G PN TYN L+
Sbjct: 522 YNALIRGHCLVGKTDEASKLLDI-------------------MLSVGLKPNECTYNTLLH 562
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC G +D A VF +M +GI+ VTY+T++ GL R + ++ M S G
Sbjct: 563 GYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITS--GK 620
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ I YN +L GL + N DEAL+ + + + L + ++ I DG EDA
Sbjct: 621 QWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMN 680
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + G VP+V Y + +E + E + EM G P + N ++ L
Sbjct: 681 LFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLL 740
Query: 423 RQGNVGTA 430
+G++ A
Sbjct: 741 LRGDISRA 748
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 147/346 (42%), Gaps = 34/346 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT-----PSLKIFNSILDVLVKEDIDL 63
P+ +F +++ GL I+ KA +L F M P++ FN+I+ L E +
Sbjct: 447 PNIVVFTSLVYGLC---TIDKWEKAGELF--FEMVNQGIHPNVVFFNTIMCNLCTEGRVM 501
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
M G + D +Y L++G CL + + KLL +M S G+KPN YNTL+
Sbjct: 502 KAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLL 561
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H C++G++ A S+ +M P VT++ ++ K A L + G
Sbjct: 562 HGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQ 621
Query: 180 PDVVTIT----------------KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
+ T K+ + LCS +D + G + G+ +
Sbjct: 622 WSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNL 681
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ G +P+V TY ++ + E G L+ +F++M+ G + N + + L+R L
Sbjct: 682 FATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLL 741
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY-RENQQDEAL 328
G I L +++ + + S+L L+ RE Q ++L
Sbjct: 742 RGDISRAGAYLSKIDEKNFSLEASTT---SMLISLFSREEHQAKSL 784
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 96/241 (39%), Gaps = 52/241 (21%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDID 62
S+ P+E + T++ G R I+D + +TP + +N+IL L K
Sbjct: 547 SVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFS 606
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A+ Y M+ SG Q YTY I++ GL N V + K+ + S+ ++ + + +N +
Sbjct: 607 EAKELYL-NMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIM 665
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
I +L K+G+ A +L + + + G VPDV
Sbjct: 666 IGALLKDGRKEDAMNLFATIS-------------------------------ANGLVPDV 694
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T + E L E+G L + G EME+ GC PN N L
Sbjct: 695 TTYRLIAENLI----------------EEGSLEEFDG---MFSEMEKSGCAPNSLMLNFL 735
Query: 243 I 243
+
Sbjct: 736 V 736
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 229/524 (43%), Gaps = 72/524 (13%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-E 59
MP S PD F VI GL R + +++ + R P +N +D L K E
Sbjct: 1 MPCS----PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAE 56
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A KKM TY L+ GL R+ + +L M +G P Y
Sbjct: 57 RVDDAFQLL-KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTY 115
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+I L K G+V AR + DM P+ ++ LI CK A L +++ +
Sbjct: 116 TVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANA 175
Query: 176 FGF----VPDVVTITKVLELLCSVGRVMDAVEILE-ESGEQG----------------RL 214
VPDVVT T +++ LC GR+++A ++ + E+ E+G +L
Sbjct: 176 RKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKL 235
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G+V+ GC EM +G P+ TY LI + + ++ A V+ M G + VTY
Sbjct: 236 GRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTY 295
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ ++ GLC GR+ + ME+ G + Y++++ G
Sbjct: 296 NIILDGLCKAGRVAEAYATFLAMEE--RGCVATVVTYSALMDG----------------- 336
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
FC +GNV A F +M++ G PN+V Y+ +I C+ ++ +
Sbjct: 337 ----------------FCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 380
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLC-RQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
A +++ P TFN L GLC R V ++L E + +G+ P YS
Sbjct: 381 AYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFES---MVSQGTSPNLHSYS 437
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
L+ +C GG + A + +MV +G+ PD + +N+L+ +C++
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIA 481
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 225/505 (44%), Gaps = 36/505 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + I GL +A ++D + + P+ + +++D L+K +D A A
Sbjct: 40 PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAV 99
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ G TY +++ GL RV + ++ M G +P++ +Y LI LC
Sbjct: 100 L-EQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLC 158
Query: 128 KNGKVGRARSLMSDMEE--------PNDVTFSILICAYCKEENLVNA-LVLLEKSFSFGF 178
K+GK A +L + P+ VT++ LI CK ++ A V +++ GF
Sbjct: 159 KSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGF 218
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
+PD VT T +++ LC +GRV + E E +G + + R
Sbjct: 219 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 278
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
++M + G + + TYNI++ C+ G + A F M+ G VTY L+ G C
Sbjct: 279 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 338
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
S G + +++ + M D G + + YN ++ GL R + +A Y +++ +L P
Sbjct: 339 SEGNVSAAVELFRRMLD--RGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPD 396
Query: 341 AVDRSLKILGFCVD-GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ + G C V D F+ M+ +G PN+ Y L+ C+ + A E+
Sbjct: 397 VYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIF 456
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+EM G P FNT++ LC G V AL++ E + R S P + Y L+ L
Sbjct: 457 REMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE----LERRSAPDAWSYWSLLDGL 512
Query: 460 CEKGGFQSASMLLVQMVGKGILPDY 484
+ A +L M +G P +
Sbjct: 513 SRCERMEEARLLSFHMKLQGCAPRH 537
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 156/348 (44%), Gaps = 29/348 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + ++I GL + + + + + P + +++D +K I A
Sbjct: 220 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 279
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR+ M+ SG TY I++ GLC RV + + M+ RG V Y+ L+ C
Sbjct: 280 YRQ-MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 338
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G V A L M EPN V+++I+I C+ L A EK PDV
Sbjct: 339 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 398
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T L LC RL V G + M +G PN+ +Y+IL+
Sbjct: 399 TFNAFLHGLCQ------------------RLDTVSDGVELFESMVSQGTSPNLHSYSILM 440
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C G L+ AL++F +M G++ + V ++TLIR LC GR+D+ L++ + +E
Sbjct: 441 DGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR--- 497
Query: 304 SKGRISPYNSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDRSLKIL 349
S Y S+L GL R + +EA L + +++ PR D +++ L
Sbjct: 498 SAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPRHYDLTVRFL 545
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/499 (26%), Positives = 236/499 (47%), Gaps = 43/499 (8%)
Query: 15 ITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMA 74
I + + + R+R + +V D F+ S K FN +LD + KKM
Sbjct: 50 IDLFQEMIRSRPLPSLV---DFSRFFSGVASTKQFNLVLD-------------FCKKMEL 93
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ + YT I++ C + + +L + G +P++ +NTLI+ LC KV
Sbjct: 94 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSE 153
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L++ M E PN VT++ ++ CK + AL LL K DV T + +++
Sbjct: 154 AVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIID 213
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC G + A+ + +E +G + GK G + LK+M + +P
Sbjct: 214 SLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIP 273
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV T+N+LI + + G L A +++ +M GIS N +TY++L+ G C R+ + +L
Sbjct: 274 NVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
LM + I + S++ G + + DE ++ +++ K L V S+ + GFC
Sbjct: 334 DLM--VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFC 391
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G +E A+ F +M+ G +P+V+ Y L+ C ++ +A E+ +++
Sbjct: 392 QSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV 451
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ ++ G+C+ G V A L +G P Y+ +I LC+KG A++LL
Sbjct: 452 MYTIIIEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 508
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M G P+ T+N+L+
Sbjct: 509 RKMEEDGNEPNDCTYNTLI 527
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 211/441 (47%), Gaps = 30/441 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + F T+I GL +++ V + P++ +NSI++ + K D LA
Sbjct: 133 PDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDL 192
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M V+ D +TY+ ++ LC + L M+++G+K + V YN+L+ LC
Sbjct: 193 LRK-MDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK L+ DM PN +TF++LI + KE L A L ++ + G P+ +
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTI 311
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R+ +A +L+ M R C P++ T+ LI
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDL-------------------MVRNNCSPDIVTFTSLI 352
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC+ +D + +F + G+ N VTY L++G C G+++ ++ Q M G
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEM--VSLG 410
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +L GL + ++ALE + Q K+ V ++ I G C G VEDA
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNV+ Y +I C++ + EA+ L+++M G P T+NT++
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH 530
Query: 422 CRQGNVGTALKLVEEDMRGIG 442
R G++ + KL+EE M+ G
Sbjct: 531 LRDGDLTASAKLIEE-MKSCG 550
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 15/243 (6%)
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
I GIS V Y +R + DD + + Q M S+ + ++ G+ Q
Sbjct: 23 ISGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPS--LVDFSRFFSGVASTKQ 80
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFD-----QMIEEGGVPNVVI 378
+ L++ K+ME + ++ L ++ K CF ++++ G P+
Sbjct: 81 FNLVLDFCKKME---LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTT 137
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-D 437
++ LI+ C E +V EA L+ M +G P T+N++++G+C+ G+ AL L+ + D
Sbjct: 138 FNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMD 197
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
R + YS +I +LC G +A L +M KGI +T+NSL+ L +
Sbjct: 198 ERNVKADVFT----YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKA 253
Query: 498 TTW 500
W
Sbjct: 254 GKW 256
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
+ S + D Y I+++G+C +V D + L + +GVKPN + Y +I LCK G
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A L+ MEE PND T++ LI A+ ++ +L + L+E+ S GF D +I
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 560
Query: 188 VLELLCSV 195
V+++L S
Sbjct: 561 VIDMLSSA 568
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 242/511 (47%), Gaps = 36/511 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
F ++R L A ++ ++ D + S++ NSIL+ L + D+ A + ++M
Sbjct: 176 FDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF-EQM 234
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+G D +T AI+ K C V + + M GV+ N V Y+ +++ C+ G+
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNAL-VLLEKSFSFGFVPDVVTITK 187
AR ++ + PN VT+++L+ YC E+N+ A V+ E + V D
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
V+ C +GR+ DA +L E + +LG++ L EM G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+ +YN L+ YC+ G+++ A + +N M +G + +TY+ L++G CS G IDD L
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
++ LM K+G +++L G ++ + ++AL K+ L + I
Sbjct: 475 RLWFLM--LKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVIN 532
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C + +A+ D+M + P+++ Y L YC+ + AS ++ E+ G+ P
Sbjct: 533 GLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAP 592
Query: 410 IASTFNTVLSG--LCRQ-GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
FN++++G + +Q G V L E RG+ P + Y LI C++G
Sbjct: 593 TIEFFNSLITGHFIAKQHGKVNDI--LFEMSNRGLS----PNTVAYGALIAGWCKEGDLH 646
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+A L ++M+ KG++P+ +SL+ C ++
Sbjct: 647 TAYNLYLEMIEKGLVPNLFICSSLVSCFYRK 677
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 243/567 (42%), Gaps = 92/567 (16%)
Query: 10 DESIFITVIRG---LGR----ARMINDVVKATDLVSRF---------------------- 40
DE++F VI G +GR AR++N++V + V+ F
Sbjct: 348 DEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNIL 407
Query: 41 -NMT-----PSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCL 93
MT P +NS++D K+ + + +AF M+ +G TY L+KG C
Sbjct: 408 HEMTGVGVRPDTYSYNSLVDGYCKKGL-MNKAFETYNTMLRNGFAATTLTYNALLKGFCS 466
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ D +L +M +G+ PN + +TL+ K+GK +A +L + N T
Sbjct: 467 LGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTT 526
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ +I CK E + A L++K + PD++T + C +G + A IL E
Sbjct: 527 FNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586
Query: 210 EQG-------------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
G + GKV L EM +G PN Y LI+ +C+ G
Sbjct: 587 NLGFAPTIEFFNSLITGHFIAKQHGKVND---ILFEMSNRGLSPNTVAYGALIAGWCKEG 643
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ------LMED--SKE 302
L +A +++ +M G+ N +L+ G+ D+ +LQ ++ D +
Sbjct: 644 DLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPR 703
Query: 303 GSKGRISPY----------------NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
G+++ + N V++GL + + ++A L ++
Sbjct: 704 LEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTY 763
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S I G G V+ A D M+ G PN+V Y+ LI+ C+ + A L K++
Sbjct: 764 SSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWT 823
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P A T+NT++ C+ G + A KL + R I G P YS LI LC +G
Sbjct: 824 KGISPNAITYNTLIDKHCKDGYITEAFKLKQ---RMIEEGIHPTVFTYSILINGLCTQGY 880
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A LL QM+ + P+Y+T+ +L+
Sbjct: 881 MEEAIKLLDQMIENNVDPNYVTYWTLI 907
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 209/505 (41%), Gaps = 65/505 (12%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ +++G I+D ++ L+ + + P+ +++LD K K+ +
Sbjct: 457 YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETL 516
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A G+ + T+ ++ GLC R+ + +L+ MK P+ + Y TL CK G +
Sbjct: 517 ARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMD 576
Query: 134 RARSLMSDMEE---------------------------------------PNDVTFSILI 154
RA +++++E PN V + LI
Sbjct: 577 RASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALI 636
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE------- 207
+CKE +L A L + G VP++ + ++ G+ +A +L+
Sbjct: 637 AGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMI 696
Query: 208 ---SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
S + +GKV F+ + +NI+I C+ G ++ A ++ D+K
Sbjct: 697 PDISAPRLEIGKV---ANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKD 753
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + TY +LI G + G +D + M G I YNS++YGL + +
Sbjct: 754 KGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSV--GLTPNIVTYNSLIYGLCKSGEL 811
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
A+ K++ + + P A+ + I C DG + +A + +MIEEG P V Y L
Sbjct: 812 SRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSIL 871
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM---- 438
I+ C + + EA +L+ +M + P T+ T++ G R +V + +++
Sbjct: 872 INGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTIVVK 931
Query: 439 ----RGIGR-GSLPGSGHYSPLIKA 458
R + R GS+ +P KA
Sbjct: 932 ASPRRAVRRPGSVSRPARLTPAPKA 956
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ P+ + ++I GL ++ ++ V + ++P+ +N+++D K D +
Sbjct: 788 SVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCK-DGYI 846
Query: 64 ARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
AF +++M+ G+ +TY+IL+ GLC + + KLL M V PN V Y TL
Sbjct: 847 TEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTL 906
Query: 123 IH 124
I
Sbjct: 907 IQ 908
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 216/470 (45%), Gaps = 32/470 (6%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAIL 87
+V + + F P+L+ +N+IL L K ID + Y + ++ + + + YT+ +
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLE-LLNNQISPNIYTFNAM 200
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP-- 145
+ G C V + + G+ P++ Y +LI C+N V A + M +
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260
Query: 146 --NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
N+V+++ LI C+ + AL L P V T T ++ L GR ++A+
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ EM+ KGC PNV TY +LI C+ +D A + ++M
Sbjct: 321 LF-------------------NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ + VTY+ LI G C G IDD +IL LME + G R YN ++ GL ++ +
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRT--YNELICGLCKKRK 419
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+A+ L +M KL P + + I G C ++E A R M E G VP+ Y
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
I C+E RV EA L + G + ++ G C+ G + A L+E R +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE---RML 536
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP S Y+ LI+ LC++ + AS L+ +M+ G+ P +T+ L+
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 136/490 (27%), Positives = 219/490 (44%), Gaps = 38/490 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + R ++ + + + ++PSL +NS++ K + DL A+
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN-DLESAYR 460
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +G+ D +TY++ + LC RV + L +K++GVK N VIY LI C
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A SL+ M PN T+++LI CKE+ + A L+ K + G P VV
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ GE + G + M G P+V TY +
Sbjct: 581 TYTILI-------------------GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+Y G+L+ DV M +GI + VTY LI G G L+ M D+ G
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT--G 679
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS--LKILGFCVDGNVEDAK 361
K + + ++ L EN+ E + +VD + K L + E A
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEY------EIAL 733
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ F++M+E G +V IY LI +CQ+ER+ EA L+ M G P +N++L
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 793
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ G A++LV+ + G LP Y L+ L +G + A + ++ G
Sbjct: 794 CKLGVYAEAVRLVDA---MVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYN 850
Query: 482 PDYLTWNSLL 491
D + W L+
Sbjct: 851 YDEVAWKVLI 860
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 137/509 (26%), Positives = 220/509 (43%), Gaps = 46/509 (9%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKED-IDLARAF 67
++ I + G GR V+A +L + P++ + ++D L KE+ +D AR
Sbjct: 303 TVLIYALSGSGRK------VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM 356
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M G+ TY L+ G C + D F++L +M+S PN+ YN LI LC
Sbjct: 357 L-SEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLC 415
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K KV +A +L++ M E P+ +T++ LI CK +L +A LL G VPD
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQW 475
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + ++ LC GRV +A + + +G ++GK+ L+ M
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
CLPN TYN+LI C+ + A + M G+ VTY LI + G
Sbjct: 536 LNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAF 595
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D LK+ M G + + Y + L+ + + +E + + +M E + P V +
Sbjct: 596 DHALKVFNHM--VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G+ G A M++ G P++ I LI E R MKE
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENR-------MKETRSE 706
Query: 406 GYLPIASTFNTV-LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+ S N+V ++ + + ALKL E + + G Y LI C++
Sbjct: 707 IGIDSVSNVNSVDIADVWKTLEYEIALKLFE---KMVEHGCTIDVSIYGALIAGFCQQER 763
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ A L+ M +G+ P +NSLL C
Sbjct: 764 LEEAQGLVHHMKERGMSPSEDIYNSLLDC 792
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 138/321 (42%), Gaps = 28/321 (8%)
Query: 209 GEQGRLGKVKGGCR-----FLKEMERK-------GCLPNVDTYNILISSYCETGVLDSAL 256
E+ R+ +K C F+ E+ RK P + YN ++ S + ++D
Sbjct: 120 AEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMK 179
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG----LKILQLMEDSKEGSKGRISPYN 312
V+ ++ + IS N T++ ++ G C G + + KI+Q G Y
Sbjct: 180 TVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQ------AGLHPDTFTYT 233
Query: 313 SVLYGLYRENQQDEALE-YLKQMEKLFPR-AVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ G R D A E +L +K R V + I G C G + +A + F M E+
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED 293
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
P V Y LI+A R EA L EM G P T+ ++ GLC++ + A
Sbjct: 294 NCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA 353
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
K++ E +G +P Y+ LI C++G A +L M P+ T+N L
Sbjct: 354 RKMLSEMSE---KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL 410
Query: 491 LICL-SQQTTWLLLLLLNEMV 510
+ L ++ + LLN+M+
Sbjct: 411 ICGLCKKRKVHKAMALLNKML 431
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 126/316 (39%), Gaps = 35/316 (11%)
Query: 45 SLKIFNSILDVLVKEDIDLARAFYRK---------------KMMASGVQGDDYTYAILMK 89
+LK+FN ++ + + D+ AF KM G+ D TY +L+
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVT 149
G F L M G KP+ I + LI +L ++ RS + ++ ++V
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIG-IDSVSNVN 716
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
S+ I K AL L EK G DV ++ C R+ +A ++
Sbjct: 717 -SVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 775
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
E+G +LG R + M G LP +++Y +L+ G +
Sbjct: 776 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE 835
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A VF+ + G +++ V + LI GL +D+ +++ +ME+ ++ I+ +
Sbjct: 836 KAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADIA--CA 893
Query: 314 VLYGLYRENQQDEALE 329
L L N ALE
Sbjct: 894 ALMRLAAANSTKGALE 909
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 141/559 (25%), Positives = 250/559 (44%), Gaps = 78/559 (13%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP +++F + A + ++ + R + P+L N++L LV+ +
Sbjct: 125 LSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFS 184
Query: 65 RAFYRK---KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYN 120
A R+ M+ GV D T+ +L+ G CL ++ D +L M S V P++V YN
Sbjct: 185 IASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYN 244
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T++ ++ K G++ + L+ DM+ PN VT++ L+ YCK +L A ++E
Sbjct: 245 TILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 177 GFVPDVVTITKVLELLCSVGRV------MDAVEILEESGEQGRLGKVKGGC--------- 221
+PD+ T ++ +C+ G + MD ++ L+ + + GC
Sbjct: 305 NILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 222 -RFLKEMERKGCLPNVDTYNI------------------------------------LIS 244
+ +++ME G PN T+NI LI
Sbjct: 365 KKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIK 424
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+Y + G L AL++ +M GI N +T +T++ LC ++D+ +L K G
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLD--SAHKRGY 482
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y +++ G +RE + ++A E +M+ K+ P + I G C G E A
Sbjct: 483 IVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAME 542
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD++ E G +P+ ++ +I YC+E RV +A E E H + P T N +L+GLC
Sbjct: 543 KFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 423 RQGNVGTALK-----LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++G AL + E ++ + Y+ +I A C+ + A LL +M
Sbjct: 603 KEGMTEKALNFFNTLITEREVDTVT---------YNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 478 KGILPDYLTWNSLLICLSQ 496
K + PD T+NS++ L +
Sbjct: 654 KRLEPDRFTYNSIITSLME 672
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 225/457 (49%), Gaps = 38/457 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+++ + + ++DV + R + P+ +N+++ K L AF
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLG-SLKEAFQ 296
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M + + D TY IL+ G+C + +G +L+ VMKS ++P+ V YNTLI
Sbjct: 297 IVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCF 356
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL------VNALVLLEKSFSFG 177
+ G A+ LM ME +PN VT +I + CKEE V LV + G
Sbjct: 357 ELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMH-----G 411
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
F PD+VT +++ VG + A+E++ E G++G + KV
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAH 471
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
L ++G + + TY LI Y ++ A +++++MK I+ T+++LI GL
Sbjct: 472 NLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGL 531
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C G+ + L + + E ++ G +NS++ G +E + ++A E+ + K +
Sbjct: 532 CHHGKTE--LAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 342 VDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ + IL G C +G E A F+ +I E V + V Y+ +I A+C++++++EA +L+
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLITEREV-DTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
EM P T+N++++ L G + A +L+++
Sbjct: 649 SEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKK 685
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 31/360 (8%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ F I + AY AL + +K P+++T LL + R + I
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNT---LLIGLVRYPSSFSI 185
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+M + G +V T+N+L++ YC G L+ AL + M
Sbjct: 186 -------------ASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVS 232
Query: 265 D-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS--KGRISPYNSVLYGLYRE 321
+ ++ + VTY+T+++ + GR+ D + L+ D K R++ YN+++YG +
Sbjct: 233 EFNVNPDNVTYNTILKAMSKKGRLSD---VKDLLLDMKRNGLVPNRVT-YNNLVYGYCKL 288
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
EA + ++ M++ + P ++ I G C G++ + D M P+VV Y
Sbjct: 289 GSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTY 348
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--D 437
+ LI + EA +LM++M G P T N L LC++ + V+E +
Sbjct: 349 NTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVE 408
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
M G P Y LIKA + G A ++ +M KGI + +T N++L L ++
Sbjct: 409 MHGFS----PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 111/284 (39%), Gaps = 44/284 (15%)
Query: 49 FNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
N+ILD L KE +D A G D+ TY L+ G +V F++ M
Sbjct: 454 LNTILDALCKERKVDEAHNLL-DSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEM 512
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
K + P +N+LI LC +GK A ++ E P+D TF+ +I YCKE +
Sbjct: 513 KRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRV 572
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVG---------------RVMDAVEILEES 208
A +S F PD T +L LC G R +D V
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDTVTYNTMI 632
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV-------FND 261
+ K+K L EME K P+ TYN +I+S E G L A ++ F
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGS 692
Query: 262 MK----------------IDGISWNFVTYDTLIRGLCSGGRIDD 289
MK + + + Y +I LCS GR+ +
Sbjct: 693 MKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRLKE 736
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 225/494 (45%), Gaps = 38/494 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ PP + F ++ + + + + V+ + + F + P++ N +L+ L
Sbjct: 62 MHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLN----ILINSFCHLQ 117
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G Q + T+ L++GLC+ ++G+ L M G +PN V Y
Sbjct: 118 RLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYG 177
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ ME+ P+ V ++ +I + CK+ + A L +
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 237
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P + T ++ LC+ L + K L EM +PNV
Sbjct: 238 GISPSIFTYNSLIHALCN-------------------LCEWKHVTALLNEMVNSKIMPNV 278
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
++ ++ + C+ G + A DV + M G+ N VTY+ L+ G C +D+ +K+
Sbjct: 279 VIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDT 338
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M +G + Y++++ G + + ++A+ ++M ++L P V S + G C
Sbjct: 339 M--VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHV 396
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++DA F +M+ G +P+ V Y L+ C+ R+ EA L+K + G P +
Sbjct: 397 GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIY 456
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
V+ G+CR G + A L +G P Y+ +I LC++G AS L +
Sbjct: 457 TIVIDGMCRAGELEAARDLFSNLS---SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGE 513
Query: 475 MVGKGILPDYLTWN 488
M KG P+ T+N
Sbjct: 514 MKRKGYSPNGCTYN 527
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 222/477 (46%), Gaps = 36/477 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + F T+IRGL I +V+ D + P++ + ++++ L K A
Sbjct: 136 PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL 195
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M Q D Y ++ LC +V F L M +G+ P+ YN+LIH+LC
Sbjct: 196 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 255
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +L+++M PN V FS ++ A CKE ++ A +++ G P+VVT
Sbjct: 256 LCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 315
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C + +AV++ + M KG P+V +Y+ LI+
Sbjct: 316 YNALMDGHCLRSEMDEAVKVFD-------------------TMVCKGFAPDVVSYSTLIN 356
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ ++ A+ +F +M + N VTY TL+ GLC GR+ D + + M +
Sbjct: 357 GYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMV-----T 411
Query: 305 KGRISPYNS---VLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVED 359
+G+I + S +L L + + DEA+ LK +E + P ++ I G C G +E
Sbjct: 412 RGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEA 471
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A+ F + +G PNV Y +I+ CQ+ + EAS+L EM GY P T+N +
Sbjct: 472 ARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITR 531
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
G R ++L++E + RG + L++ L + G QS +L + +
Sbjct: 532 GFLRNNETLRGIQLLQE---MLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 228/475 (48%), Gaps = 31/475 (6%)
Query: 60 DIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
DID +A ++M +G TY+ + GLC V + + S N
Sbjct: 268 DIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYC 327
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF 174
YN +IH LCK G++ A ++ +M+ P+ T+SILI +CK+ ++ L L+E+
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK 387
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMD-AVEILEESGEQGRLGK-------VKGGC----- 221
P +V+ + + LC R+ D +++I + G G +KG C
Sbjct: 388 YSNMEPSLVSYSSLFHGLCK-KRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDL 446
Query: 222 ----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ ++EM R P+ + L+ +C+ G+ +AL+ FN M GI + T + +
Sbjct: 447 DSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
I C GR+++ L ++ M+ +G + YN+V+ L +E + + ALE M K
Sbjct: 507 IDAHCREGRVEEALNLMNEMQ--TQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKR 564
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P V S I GF N + A + +M++ G P++V Y LI+ C R+ EA
Sbjct: 565 NVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEA 624
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L K+MT +G P ++ +V++G CR G++ A L E ++ RG LP Y+ L
Sbjct: 625 YNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQ---RGHLPTVVTYTSL 681
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-LLLLLLNEM 509
+ C+ A ML+ +M KGI PD +T+N L+ ++ L +LNEM
Sbjct: 682 VDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM 736
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 228/486 (46%), Gaps = 32/486 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + T I GL R + + + N ++ +N+I+ L K+ ++D A
Sbjct: 288 PTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKV 347
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M + G+ D YTY+IL+ G C V G L+ MK ++P+ V Y++L H LC
Sbjct: 348 L-EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLC 406
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + + D+ + + +SILI +C + +L +A L+E+ PD
Sbjct: 407 KKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPS 466
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ C +G ++A+E F M G LP++ T N++I
Sbjct: 467 NFESLVHGFCKMGLWVNALE-------------------FFNMMLEGGILPSIATCNVII 507
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++C G ++ AL++ N+M+ GI N TY+ +I LC + + L++ LM K
Sbjct: 508 DAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLM--LKRN 565
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
+ Y++++ G +++ +AL +M K+ P V ++ I C + +A
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M E G P+ + Y +I +C+ +R+A L EM G+LP T+ +++ G
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ + A L++E R +G P Y+ LI A +G A +L +M G+L
Sbjct: 686 CKMNRIDIADMLIDEMKR---KGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVL 742
Query: 482 PDYLTW 487
PD++T+
Sbjct: 743 PDHMTY 748
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 200/437 (45%), Gaps = 38/437 (8%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG- 133
+G++ + L+K L NR L MKS G PN Y +++ CK G G
Sbjct: 208 TGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCK-GNFGE 266
Query: 134 ------RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+A ++ +ME P VT+S I C+ + +AL + S + +V
Sbjct: 267 ADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVY 326
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ LC G + +A+++LE EM+ G P+V TY+ILI
Sbjct: 327 CYNAIIHGLCKKGELDEALKVLE-------------------EMKSCGISPDVYTYSILI 367
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ G ++ L + +MK + + V+Y +L GLC D L I + + G
Sbjct: 368 HGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFR--DLGAAG 425
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
K + Y+ ++ G + D A + +++M + L P + + GFC G +A
Sbjct: 426 YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNAL 485
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F+ M+E G +P++ + +I A+C+E RV EA LM EM G P T+N V++ L
Sbjct: 486 EFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRL 545
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++ AL+L ++ R LP YS LI ++ Q A ML +M+ G+
Sbjct: 546 CKERKSERALELFPLMLK---RNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVT 602
Query: 482 PDYLTWNSLLICLSQQT 498
PD + + L+ L ++
Sbjct: 603 PDMVAYTILINILCHRS 619
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 42/307 (13%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V +++LI + +L++A+DVF K G+ + + + L++ L R + +
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237
Query: 295 QLMEDSKEGSKGRISPY----NSVLYGLYRENQQD--EALEYLKQMEK--LFPRAVDRSL 346
+ M+ + G + Y N G + E D +A E L++ME+ P V S
Sbjct: 238 EEMKST--GPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYST 295
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G VE A +I G+ NV Y+ +IH C++ + EA ++++EM G
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEED---------------MRGIGRGSLP---- 447
P T++ ++ G C+QG+V L L+EE G+ + L
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415
Query: 448 -------GSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+G+ YS LIK C +G SA L+ +MV + PD + SL+
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475
Query: 495 SQQTTWL 501
+ W+
Sbjct: 476 CKMGLWV 482
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 229/505 (45%), Gaps = 72/505 (14%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D AR Y +M+A DDY+ ++++GLCL V G KL+ G PN+V YN
Sbjct: 241 DDARKLY-DEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNV 299
Query: 122 LIHSLCKNGKVGRA-----------------------------------RSLMSDMEE-- 144
LI C+ G VGR SL+S+M E
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
PN ++ +I A CK + ALV+L++ F+ G PD +T + ++ LC GRV +A
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R L+E R PN+ +Y LI +C G + A ++ +M
Sbjct: 420 -------------------RLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEM 460
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + + VT+ LI GL G++ + L + + M + I YN ++ GL ++
Sbjct: 461 MERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI--YNVLISGLCKKK 518
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
A +++M + + P + I GF + ++++A++ F+ M ++G P+VV Y+
Sbjct: 519 MLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN 578
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+I YCQ + EA E M M G +P T+ T++ G +QGN+ AL L+ + M+
Sbjct: 579 AMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMK- 637
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ--- 497
R P YS LI C+ G +A L M +G+ P+ +T+ L+ L ++
Sbjct: 638 --RRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKV 695
Query: 498 ---TTWLLLLLLNEMVSFVMVVHEL 519
+ +LLN+ +H L
Sbjct: 696 VRAAMYFEYMLLNQCSPNDYTLHSL 720
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 216/508 (42%), Gaps = 53/508 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P + T++ LGR D+ K L+S + P+++I+NS++D L K
Sbjct: 327 PTVVTYGTLMSWLGRK---GDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQA 383
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K+M A G D T++ L+ GLC RV + +LL + PN Y +LIH
Sbjct: 384 LVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHG 443
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C G+V A +L+ +M E P+ VTF LI + AL++ EK + +PD
Sbjct: 444 FCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPD 503
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
++ LC + A ++EE EQ P+ Y
Sbjct: 504 ANIYNVLISGLCKKKMLPAARNLIEEMLEQ-------------------NVHPDKYVYTT 544
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI + LD A +F M+ GI + V Y+ +I+G C G +++ ++ + M
Sbjct: 545 LIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKV- 603
Query: 302 EGSKGRIS---PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
GRI Y +++ G ++ AL L M K P V S I G+C G+
Sbjct: 604 ----GRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGD 659
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ A+ F M +G PNV+ Y LI + ++++V A+ + M + P T ++
Sbjct: 660 TDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHS 719
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSL-------------PGSGHYSPLIKALCEKG 463
+++GLC + G+G+L P + Y+ +I +LC
Sbjct: 720 LVTGLC-NSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHN 778
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
A L +M KG PD T+ SLL
Sbjct: 779 MLGEALDLKNKMANKGYKPDSATFLSLL 806
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 192/438 (43%), Gaps = 42/438 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
PD F T+I GL + + + + +R+ + P+L + S++ V+ ++ +A
Sbjct: 397 PDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNL 456
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MM G D T+ L+ GL + +V + + M +R + P++ IYN LI LC
Sbjct: 457 L-VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLC 515
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + AR+L+ +M E P+ ++ LI + + E+L A + E G PDVV
Sbjct: 516 KKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVV 575
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
+++ C G + +AVE + + GR+ G + G L +M
Sbjct: 576 GYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDM 635
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
++ C PNV Y+ LI+ YC+ G D+A +F M+ G+ N +TY LI L ++
Sbjct: 636 MKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKV 695
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ M ++ SP + L+ L M + ++
Sbjct: 696 VRAAMYFEYMLLNQ------CSPNDYTLHSL--------VTGLCNSMASIISSHCSSTVN 741
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G G + D F ++ + P Y+ +I + C + EA +L +M GY
Sbjct: 742 LHG---KGALLD---IFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGY 795
Query: 408 LPIASTFNTVLSGLCRQG 425
P ++TF ++L G C G
Sbjct: 796 KPDSATFLSLLYGFCSVG 813
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 7/269 (2%)
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ E G LP N L+ E D A ++++M + + + ++RGLC
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G ++ GLK+++ + G YN ++ G R + L +ME L P V
Sbjct: 273 GLVEKGLKLIEARWGA--GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVV 330
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ G++E +M E PNV IY+ +I A C+ +A ++K+M
Sbjct: 331 TYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQM 390
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P A TF+T++SGLC++G V A +L+ E R P Y+ LI C +
Sbjct: 391 FAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN---PNLSSYTSLIHGFCVR 447
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G AS LLV+M+ +G PD +T+ +L+
Sbjct: 448 GEVIVASNLLVEMMERGHTPDVVTFGALI 476
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 134/322 (41%), Gaps = 37/322 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD +I+ +I GL + +M+ + + N+ P ++ +++D ++ E +D AR
Sbjct: 502 PDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKI 561
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M G+ D Y ++KG C + + + + M+ G P+ Y TLI
Sbjct: 562 F-EFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYA 620
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A SL+ DM +PN V +S LI YCK + A L S G P+V+
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680
Query: 184 TITKVLELLCSVGRVMDAVEILE-------ESGEQGRLGKVKGGCRFLKE---------- 226
T T ++ L +V+ A E + V G C +
Sbjct: 681 TYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740
Query: 227 -MERKG-------------CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ KG C P YN +I S C +L ALD+ N M G +
Sbjct: 741 NLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSA 800
Query: 273 TYDTLIRGLCSGGRIDDGLKIL 294
T+ +L+ G CS G+ + IL
Sbjct: 801 TFLSLLYGFCSVGKSREWRTIL 822
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 21/226 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PDE + T+I G + I+ + + + P++ ++S+++ K D D A
Sbjct: 607 PDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECL 666
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M + G+ + TY IL+ L ++V M PN ++L+ LC
Sbjct: 667 F-GSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLC 725
Query: 128 -------------------KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALV 168
K + R+L++D +P + ++ +I + C L AL
Sbjct: 726 NSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALD 785
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
L K + G+ PD T +L CSVG+ + IL ++ L
Sbjct: 786 LKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDEL 831
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 230/507 (45%), Gaps = 77/507 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARA 66
P + +F VI+ R+ + +K + F PS+KI+N +LD L+ +++ + A
Sbjct: 106 PCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINA 165
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
Y MKS G++PN YN L+ +L
Sbjct: 166 LYNN------------------------------------MKSEGLEPNVFTYNVLLKAL 189
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+NGKV A L+ +M +P+DV+++ +I + CK ++ A + + F P V
Sbjct: 190 CQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA-----RELAMKFEPVV 244
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
++ +C R +A +++ EM +G PNV +Y+ +
Sbjct: 245 PVYNALIHGVCKECRFKEAFDLM-------------------NEMVDRGVDPNVISYSTV 285
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
IS + G ++ +L VF M + G N T+ +LI+G GR+ D + + LM +E
Sbjct: 286 ISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLM--IRE 343
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + YN++++GL + DEA+ QMEK + P S I GF G++ A
Sbjct: 344 GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSA 403
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+++MI G PNVV+Y C++ CQ +A +L+ M G P TFN + G
Sbjct: 404 CETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKG 463
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LCR G V A+ ++++ + LP Y+ L+ L F+ A L+ ++ + +
Sbjct: 464 LCRAGRVEWAMNVLDQMEK---YECLPNIRTYNELLDGLFRANAFREACGLIRELEERKV 520
Query: 481 LPDYLTWNSLLICLS-----QQTTWLL 502
D +T+N+++ S QQ LL
Sbjct: 521 EFDCVTYNTIMYGFSFNGMHQQVLQLL 547
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 195/438 (44%), Gaps = 69/438 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE--------- 59
PD+ + TVI + + + DV KA +L +F P + ++N+++ + KE
Sbjct: 212 PDDVSYTTVISSMCK---LGDVDKARELAMKFE--PVVPVYNALIHGVCKECRFKEAFDL 266
Query: 60 ---------------------------DIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+++L+ A + +M G + + T+ L+KG
Sbjct: 267 MNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVF-GRMFVRGCRPNVQTFTSLIKGFF 325
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
+ RVGD L ++M GV PN V YNTLIH LC +G + A S+ + ME+ PN
Sbjct: 326 VRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVT 385
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+S +I + K +LV+A K + G P+VV T ++++LC + A ++++
Sbjct: 386 TYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNM 445
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
G R G+V+ L +ME+ CLPN+ TYN L+
Sbjct: 446 ISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAF 505
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A + +++ + ++ VTY+T++ G G L++L M G K N
Sbjct: 506 REACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKM--LVNGIKLDTITVN 563
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ + + + A++ L + EK F RA + ++ + G C E+A +M+
Sbjct: 564 TTVNAYCKLGKVKTAIKVLDNISAEKEF-RADIITHTIILWGICNWLGTEEAVVYLHEML 622
Query: 369 EEGGVPNVVIYDCLIHAY 386
+ G PN+ ++ L+ +
Sbjct: 623 KRGIFPNIATWNVLVRGF 640
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 254 SALDVFNDMKIDG-ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
S+L+ F + G +TY+T+I L +D +LQ M+ E +
Sbjct: 56 SSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMK--LENVPCSQELFQ 113
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA-----KRCFDQM 367
V+ R N ++ L+ ++ + + S+KI +D + ++ M
Sbjct: 114 FVIKCYRRSNLGEQGLKMFYRIREF---GCEPSVKIYNLVLDALLSQNLFKMINALYNNM 170
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
EG PNV Y+ L+ A CQ +V A +L+ EM+ G P ++ TV+S +C+ G+V
Sbjct: 171 KSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDV 230
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A R + P Y+ LI +C++ F+ A L+ +MV +G+ P+ +++
Sbjct: 231 DKA--------RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISY 282
Query: 488 NSLLICLS 495
++++ CLS
Sbjct: 283 STVISCLS 290
>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 809
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/473 (27%), Positives = 226/473 (47%), Gaps = 33/473 (6%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
P + N +++ LV+ +D+A A YR+ + A G+ +DYTY I +KG C + +
Sbjct: 180 FAPQILSCNFLMNRLVESRKVDMAIAIYRQ-LKAFGLNPNDYTYTIAIKGFCRKGNLAEA 238
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---EEPNDV-TFSILICA 156
+ M+ GV PNS Y T I LC +G+ ++ D+ + P DV ++++I
Sbjct: 239 IDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRG 298
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---- 212
+C E L A +L + GF PDV ++ C VG ++ A+ + +E +G
Sbjct: 299 FCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTN 358
Query: 213 ------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
++G KE ++ G + YN+++ + C+ G ++ A+++
Sbjct: 359 CVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLV 418
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+MK + + + Y T+I G G++ D L I + M+D G K I YN + G R
Sbjct: 419 EMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDI--GHKPDIVTYNVLAGGFSR 476
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
EAL L ME + P V ++ I G C+ G V+DA+ FD + EE + N
Sbjct: 477 NGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNL-EEKCLEN--- 532
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y +++ YC+ V +A L+ ++ G + ++F +L LC +G+ AL L+E
Sbjct: 533 YSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLE--- 589
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ P YS +I AL + G + A + +V +G+ PD +T+ ++
Sbjct: 590 TMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMI 642
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 190/425 (44%), Gaps = 38/425 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAFY 68
DE+ + V+ L + + + V+ + M P + + +++ +K + A Y
Sbjct: 393 DEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIY 452
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ M G + D TY +L G + LL+ M+++GVKP++V +N +I LC
Sbjct: 453 RE-MKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCI 511
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GKV A++ ++EE +S ++ YC+ ++ A LL + G + + K+
Sbjct: 512 GGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKL 571
Query: 189 LELLCSVGRVMDAVEILEE------SGEQGRLGKVKGGCRFLKEMER----------KGC 232
L LCS G A+ +LE + KV G EME+ +G
Sbjct: 572 LGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGL 631
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+V TY I+I+ YC + A V DMK GI + +TY L+ CS +ID L+
Sbjct: 632 APDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNN-CS--KID--LR 686
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFC 352
D+ + + + P L+ E +K M+ + P + ++ I C
Sbjct: 687 SSSSSLDAMKSKENMMDP-----SALWSE---------MKDMD-IKPDVICYTVLIDKHC 731
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
N++DA F++MI+ G P+ V Y L+ YC +++A L EM G P A
Sbjct: 732 KTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAH 791
Query: 413 TFNTV 417
T + +
Sbjct: 792 TMSVL 796
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 216/526 (41%), Gaps = 91/526 (17%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLC----------------------------LTNRVGD 99
Y ++ SG D YTYA +++ LC L +GD
Sbjct: 79 YFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKDGNLDFGIVNLFEALGD 138
Query: 100 G-----------------------------FKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
G F +L K G P + N L++ L ++
Sbjct: 139 GIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESR 198
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A ++ ++ PND T++I I +C++ NL A+ + G P+ + T
Sbjct: 199 KVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYT 258
Query: 187 KVLELLCSVGRVMDAVEILEESGEQ-------GRLGKVKGGC---------RFLKEMERK 230
+E LC GR ++L++ ++G C L+EME++
Sbjct: 259 TFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQ 318
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+V Y LIS YC G L AL + ++M G+ N V ++++GL G +
Sbjct: 319 GFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEV 378
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
Q E K G + YN V+ L + + +EA+E L +M +K+ P ++ + I
Sbjct: 379 AN--QFKEFKKMGIFFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVI 436
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G+ + G V DA + +M + G P++V Y+ L + + +EA L+ M G
Sbjct: 437 SGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVK 496
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T N ++ GLC G V A + + L +YS ++ CE A
Sbjct: 497 PDTVTHNMIIEGLCIGGKVDDAQAFFD----NLEEKCLE---NYSAMVNGYCEANHVNKA 549
Query: 469 SMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSF 512
LL+++ +G + ++ LL +C S+ + L LL MV+
Sbjct: 550 FALLIRLSKQGRILKKASFFKLLGNLC-SEGDSEKALCLLETMVAL 594
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 216/470 (45%), Gaps = 32/470 (6%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAIL 87
+V + + F P+L+ +N+IL L K ID + Y + ++ + + + YT+ +
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLE-LLNNQISPNIYTFNAM 200
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP-- 145
+ G C V + + G+ P++ Y +LI C+N V A + M +
Sbjct: 201 VNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGC 260
Query: 146 --NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
N+V+++ LI C+ + AL L P V T T ++ L GR ++A+
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ EM+ KGC PNV TY +LI C+ +D A + ++M
Sbjct: 321 LF-------------------NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS 361
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ + VTY+ LI G C G IDD +IL LME + G R YN ++ GL ++ +
Sbjct: 362 EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRT--YNELICGLCKKRK 419
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+A+ L +M KL P + + I G C ++E A R M E G VP+ Y
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
I C+E RV EA L + G + ++ G C+ G + A L+E R +
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLE---RML 536
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP S Y+ LI+ LC++ + AS L+ +M+ G+ P +T+ L+
Sbjct: 537 NDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILI 586
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/488 (27%), Positives = 216/488 (44%), Gaps = 45/488 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + R ++ + + + ++PSL +NS++ K + DL A+
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVN-DLESAYR 460
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +G+ D +TY++ + LC RV + L +K++GVK N VIY LI C
Sbjct: 461 LLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC 520
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A SL+ M PN T+++LI CKE+ + A L+ K + G P VV
Sbjct: 521 KVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ GE + G + M G P+V TY +
Sbjct: 581 TYTILI-------------------GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+Y G+L+ DV M +GI + VTY LI G G L+ M D+ G
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT--G 679
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
K + + ++ L EN+ E + +D L + E A +
Sbjct: 680 CKPSLYIVSILIKNLSHENRMKETRSEI---------GIDSVSNTLEY------EIALKL 724
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F++M+E G +V IY LI +CQ+ER+ EA L+ M G P +N++L C+
Sbjct: 725 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 784
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G A++LV+ + G LP Y L+ L +G + A + ++ G D
Sbjct: 785 LGVYAEAVRLVDA---MVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841
Query: 484 YLTWNSLL 491
+ W L+
Sbjct: 842 EVAWKVLI 849
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 223/543 (41%), Gaps = 83/543 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+E + +I GL A IN+ +K ++ N P+++ + ++ L +
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M G + + +TY +L+ GLC N++ + K+L M +G+ P+ V YN LI CK
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKE 382
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + A ++ ME PN T++ LIC CK+ + A+ LL K P ++T
Sbjct: 383 GMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITY 442
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ C V + A R L M G +P+ TY++ I +
Sbjct: 443 NSLIHGQCKVNDLESAY-------------------RLLSLMNENGLVPDQWTYSVFIDT 483
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G ++ A +F+ +K G+ N V Y LI G C G+ID +L+ M + +
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN--DACL 541
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM-----------------EKLFPRAVDRSLKI 348
YN ++ GL +E + EA + +M E L A D +LK+
Sbjct: 542 PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKV 601
Query: 349 ------LGFCVD--------------GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
LG+ D G +E+ +M EEG +P++V Y LI Y +
Sbjct: 602 FNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG------------------TA 430
A + +K M G P + ++ L + + A
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIA 721
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
LKL E + + G Y LI C++ + A L+ M +G+ P +NSL
Sbjct: 722 LKLFE---KMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSL 778
Query: 491 LIC 493
L C
Sbjct: 779 LDC 781
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 138/321 (42%), Gaps = 28/321 (8%)
Query: 209 GEQGRLGKVKGGCR-----FLKEMERK-------GCLPNVDTYNILISSYCETGVLDSAL 256
E+ R+ +K C F+ E+ RK P + YN ++ S + ++D
Sbjct: 120 AEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMK 179
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG----LKILQLMEDSKEGSKGRISPYN 312
V+ ++ + IS N T++ ++ G C G + + KI+Q G Y
Sbjct: 180 TVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQ------AGLHPDTFTYT 233
Query: 313 SVLYGLYRENQQDEALE-YLKQMEKLFPR-AVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ G R D A E +L +K R V + I G C G + +A + F M E+
Sbjct: 234 SLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED 293
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
P V Y LI+A R EA L EM G P T+ ++ GLC++ + A
Sbjct: 294 NCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEA 353
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
K++ E +G +P Y+ LI C++G A +L M P+ T+N L
Sbjct: 354 RKMLSEMSE---KGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNEL 410
Query: 491 LICL-SQQTTWLLLLLLNEMV 510
+ L ++ + LLN+M+
Sbjct: 411 ICGLCKKRKVHKAMALLNKML 431
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 120/307 (39%), Gaps = 46/307 (14%)
Query: 45 SLKIFNSILDVLVKEDIDLARAFYRK---------------KMMASGVQGDDYTYAILMK 89
+LK+FN ++ + + D+ AF KM G+ D TY +L+
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVT 149
G F L M G KP+ I + LI +L ++ RS + N +
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLE 717
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ I AL L EK G DV ++ C R+ +A ++
Sbjct: 718 YEI-------------ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK 764
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
E+G +LG R + M G LP +++Y +L+ G +
Sbjct: 765 ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNE 824
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A VF+ + G +++ V + LI GL +D+ +++ +ME+ +G + Y+
Sbjct: 825 KAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE--KGCQPNPLTYSL 882
Query: 314 VLYGLYR 320
++ GL R
Sbjct: 883 LIEGLER 889
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 243/523 (46%), Gaps = 73/523 (13%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKM 72
F V+ RA + D +K L+ R + P+L I N+ +DV V+ + L +A + ++M
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRAN-RLEKALRFLERM 303
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ + TY +++G C +RV + +LL M S+G P+ V Y T++ LCK ++
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R LM M + P+ VT++ LI K ++ AL L+ + GF D + +
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ LC GR+ +A +++ E +G C P+V TY +++ +C
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKGH------------------CPPDVVTYTAVVNGFC 465
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG--SK 305
G +D A + M G N V+Y L+ G+C G+ L+ ++M S+E S
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK---SLEAREMMNMSEEHWWSP 522
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
I+ Y+ +++GL RE + EA + +++M + FP V+ +L + C DG +A++
Sbjct: 523 NSIT-YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEE--------------------------------- 390
++ + +G NVV + +IH +CQ +
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 391 --RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
R+ EA+ELMK+M G P T+ TV+ C+ G V + ++E + I R
Sbjct: 642 KGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILE---KMISRQKC-- 696
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +I+ LC G + A LL +++ D T +L+
Sbjct: 697 RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 739
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 228/500 (45%), Gaps = 31/500 (6%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
V+R R+ D R+ P ++ S+L+VL K + M
Sbjct: 179 AVLRSQDDERVALKFFYWADRQWRYRHDPM--VYYSMLEVLSKTKLCQGSRRVLVLMKRR 236
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ ++ +M ++ D K+L +M+ GV+PN +I NT I + ++ +A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ M+ PN VT++ +I YC + A+ LLE S G +PD V+ ++
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356
Query: 192 LCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLP 234
LC R+++ +++++ ++ L FLK+ + KG
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDG-ISWNFVTYDTLIRGLCSGGRIDDGLKI 293
+ Y+ ++ + C+ G + A D+ N+M G + VTY ++ G C G +D K+
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKL 476
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGF 351
LQ+M G K Y ++L G+ R + EA E + E+ + P ++ S+ + G
Sbjct: 477 LQVMH--THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGL 534
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+G + +A +M+ +G P V + L+ + C++ R EA + M+E G
Sbjct: 535 RREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINV 594
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
F TV+ G C+ + AL ++ +DM I + + + Y+ L+ L +KG A+ L
Sbjct: 595 VNFTTVIHGFCQNDELDAALSVL-DDMYLINKHADVFT--YTTLVDTLGKKGRIAEATEL 651
Query: 472 LVQMVGKGILPDYLTWNSLL 491
+ +M+ KGI P +T+ +++
Sbjct: 652 MKKMLHKGIDPTPVTYRTVI 671
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 187/445 (42%), Gaps = 69/445 (15%)
Query: 49 FNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+++I+ L KE + A+ + + D TY ++ G C V KLL VM
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
+ G KPN+V Y L++ +C+ GK AR +M+ EE PN +T+S+++ +E L
Sbjct: 481 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 540
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A ++ + GF P V I +L+ LC GR +A +F
Sbjct: 541 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR-------------------KF 581
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++E KGC NV + +I +C+ LD+AL V +DM + + TY TL+ L
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL-- 639
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G KGRI+ EA E +K+M + + P
Sbjct: 640 -------------------GKKGRIA----------------EATELMKKMLHKGIDPTP 664
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V I +C G V+D ++MI IY+ +I C ++ EA L+ +
Sbjct: 665 VTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR--TIYNQVIEKLCVLGKLEEADTLLGK 722
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
+ A T ++ G ++G +A K+ R R +P L K L
Sbjct: 723 VLRTASRSDAKTCYALMEGYLKKGVPLSAYKVA---CRMFNRNLIPDVKMCEKLSKRLVL 779
Query: 462 KGGFQSASMLLVQMVGKG-ILPDYL 485
KG A L++++V +G I P L
Sbjct: 780 KGKVDEADKLMLRLVERGHISPQSL 804
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 18/237 (7%)
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
LC G R ++L LM+ + G ++ V+ R Q +AL+ L M++
Sbjct: 222 LCQGSR-----RVLVLMK--RRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA--- 271
Query: 341 AVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
V+ +L I +D +E A R ++M G VPNVV Y+C+I YC RV EA
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL+++M G LP ++ T++ LC++ + L+++ + G +P Y+ L
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK--EHGLVPDQVTYNTL 389
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLL-LLNEMVS 511
I L + A L KG D L +++++ L ++ L+NEM+S
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 220/469 (46%), Gaps = 35/469 (7%)
Query: 40 FNMTPSLKIFNSILDVLVKE-----DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
FN+ S KI +K+ +++ + K++ +G + D T +KG CL
Sbjct: 217 FNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLK 276
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM----SDMEEPNDVTF 150
++ + + G + V Y TLI+ LCK G+ A L+ + +P+ V +
Sbjct: 277 GQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMY 336
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ +I CK++++ +A L + S PDV T ++ C VG++ DA+++ +
Sbjct: 337 NTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK--- 393
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M K +P+V T++IL+ +C+ G + A +V M I +
Sbjct: 394 ----------------MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY +L+ G C ++ I M S G + YN ++ G + DEA++
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTM--SHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495
Query: 331 LKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
K+M +++FP + S I G C G + A D+M G P+++ Y+ ++ A C+
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCK 555
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ V +A L+ ++ G G P +T+ ++ GLC+ G + A K+ E+ + +G
Sbjct: 556 KHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFED---LLVKGYNLD 612
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ +I+ C+KG F A LL +M G +PD T+ +++ L ++
Sbjct: 613 VYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEK 661
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 192/397 (48%), Gaps = 25/397 (6%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G D +Y L+ GLC +LL + V+P+ V+YNT+I +C
Sbjct: 285 FHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMC 344
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A L S+ P+ T++ LI +C L +A+ L K S +PDV
Sbjct: 345 KDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVY 404
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + +++ C G + +A +L +Q + +V M
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G NV +YNI+I+ +C+ ++D A+ +F +M I + +TY +LI GLC GRI
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
L+++ M G + I YNS+L L +++ D+A+ L ++ + + P +
Sbjct: 525 SYALELVDEMH--YRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYT 582
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ + G C G +EDA++ F+ ++ +G +V Y +I +C + EA L+ +M +
Sbjct: 583 ILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEEN 642
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGI 441
G +P A T+ ++ L + A KL+ E MRG+
Sbjct: 643 GCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 7/166 (4%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DI 61
H Q PD + ++I GL ++ I+ ++ D + P + +NSILD L K+ +
Sbjct: 500 HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A K+ G++ D TY IL+KGLC + ++ D K+ + +G + Y
Sbjct: 560 DKAITLL-TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA-YCKEEN 162
+I C G A +L+S MEE P+ T+ I+I + + K+EN
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDEN 664
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 237/476 (49%), Gaps = 36/476 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + T+I+GL I++ + + + TP+ + +++ L + ++++A
Sbjct: 159 PNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKL 218
Query: 68 YRKKMMASGVQGDD-----YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+++ + + G + TY+I++ GLC R + +L MK++G+ P+ + Y+TL
Sbjct: 219 HKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTL 278
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
IH C GK +++ L +M +P+ VTFS+LI CKE + A LLE G
Sbjct: 279 IHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGI 338
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+++T +++ C VG + A E+ FL M KG P+ +
Sbjct: 339 VPNLITYNSLIDGFCMVGDLNSAREL------------------FL-SMPSKGLEPDEIS 379
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y LI+ YC+T + A++++N+M G S N TY TL++GL G++ D K+ +M+
Sbjct: 380 YTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMK 439
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPRAVDR-SLKILGFCVDGN 356
+ +I Y L GL + + EA+E +++ F ++ S I G C G
Sbjct: 440 TYGVSANSQI--YGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGK 497
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A F+++ +EG P+VV Y+ +IH +C+ +V A+ L ++M +G P +NT
Sbjct: 498 LETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNT 557
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+L G C + +KL+ + + + P + + ++ LC+ ++ LL
Sbjct: 558 LLCGFCEGNKLEEVIKLLH---KMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 222/469 (47%), Gaps = 36/469 (7%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
DL+ R + P + FN +L L K + +M +G+ D +T +IL LC
Sbjct: 80 DLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNV 139
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
NRV + + + RG PN V Y TLI LC ++ A L M++ PN VT+
Sbjct: 140 NRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTY 199
Query: 151 SILICAYCKEENLVNALVL----LEKSFSFGF--VPDVVTITKVLELLCSVGRVMDAVEI 204
LI C+ N+ AL L L + +G P V+T + +++ LC VGR +A E+
Sbjct: 200 GTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKEL 259
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
E EM+ +G +P+V +Y+ LI +C G D + +F++M
Sbjct: 260 FE-------------------EMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVD 300
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ + VT+ LI LC G++ + K+L++M + G + YNS++ G
Sbjct: 301 QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM--IQRGIVPNLITYNSLIDGFCMVGDL 358
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A E M L P + + I G+C V++A +++M++ G PNV Y L
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ Q+ +V +A +L M +G + + L GLC+ + A++L E
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ ++ +YS LI LC+ G ++A L ++ +G+ PD +T+N ++
Sbjct: 479 KLNIE---NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 184/383 (48%), Gaps = 34/383 (8%)
Query: 127 CKNGKVGRARS------LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + ++ +M P +F+ L+ K + L + G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D+ T++ + LC+V RV +A L + G + R+G +PNV TY
Sbjct: 125 DLFTLSILANCLCNVNRVSEA------------LAAMAG-------ILRRGYIPNVVTYT 165
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI-LQLMED 299
LI C + A +F M+ G + N VTY TLI+GLC G ++ LK+ +++ D
Sbjct: 166 TLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND 225
Query: 300 SKE---GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+ + K + Y+ ++ GL + ++DEA E ++M+ + P + S I GFC
Sbjct: 226 ASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCA 285
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G + +K FD+M+++G P++V + LI C+E +V EA +L++ M G +P T+
Sbjct: 286 GKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITY 345
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+++ G C G++ +A +L + +G P Y+ LI C+ + A L +
Sbjct: 346 NSLIDGFCMVGDLNSARELF---LSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNE 402
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ G P+ T+ +LL L Q+
Sbjct: 403 MLQVGKSPNVTTYGTLLKGLFQK 425
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 240/497 (48%), Gaps = 35/497 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD S F +I+ L RA I + + + F + P K F +I+ ++E ++D A
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSL 126
+++M+ +G + T +L+ G C R+ + + + M R G P+ +N L++ L
Sbjct: 253 -KEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGL 311
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G V A +M M +P+ T++ LI CK + A+ +L + P+
Sbjct: 312 SKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNT 371
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT ++ LC +V +A +L V G KG LP+V TYN L
Sbjct: 372 VTYNTIISTLCKENQVEEAT----------KLALVLTG---------KGILPDVCTYNSL 412
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C + A++++ +MK G + TY+ LI LC G++ + L +L+ ME S
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVS-- 470
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+++ G + + EA E QME + +V + I G C VE+A
Sbjct: 471 GCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEA 530
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ DQMI EG P+ Y+ L+ +C+ +++A+++++ M G P T+ T+++G
Sbjct: 531 SQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAG 590
Query: 421 LCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
LC+ G V A KL+ M+GI P + Y+P+I+AL + + A L +M+ K
Sbjct: 591 LCKAGRVEAATKLLRTIQMKGINLT--PHA--YNPVIQALFRRKRSKEAVRLFREMIEKA 646
Query: 480 ILPDYLTWNSLLICLSQ 496
PD +T+ + L Q
Sbjct: 647 EAPDAVTYKIVFRGLCQ 663
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 239/477 (50%), Gaps = 33/477 (6%)
Query: 41 NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
N PS IF +L L K + D + ++ ++ V +D + + ++ +
Sbjct: 84 NFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDND-SLLVFIESYASFGLYNE 142
Query: 100 GFKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILI 154
+ + M+ GV N+ YN L++ L K+ S+M P+ TF+ILI
Sbjct: 143 ILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILI 202
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-- 212
A C+ + A++L+E+ FG +PD T T +++ G + A+ + E+ E G
Sbjct: 203 KALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCV 262
Query: 213 --------------RLGKVKGGCRFLKEME-RKGCLPNVDTYNILISSYCETGVLDSALD 257
+ G+++ RF++EM R+G P+ T+N+L++ +TG + AL+
Sbjct: 263 VTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALE 322
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
V + M +G + TY++LI GLC G +D+ +K+L M + ++ S ++ YN+++
Sbjct: 323 VMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE-RDCSPNTVT-YNTIIST 380
Query: 318 LYRENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L +ENQ +EA L + + + P + I G C+ N A + +M +G P+
Sbjct: 381 LCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPD 440
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
Y+ LI + C +++EA L+KEM G T+NT++ G C+ + A ++ +
Sbjct: 441 EFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFD 500
Query: 436 E-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +++G+ R S+ Y+ LI LC+ + AS L+ QM+ +G+ PD T+NSLL
Sbjct: 501 QMELQGVSRNSVT----YNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLL 553
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 157/301 (52%), Gaps = 16/301 (5%)
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+L + G+ G +K LKEM+ + + D+ + I SY G+ + L + M
Sbjct: 94 EVLHKLGKAGEFDAMKD---ILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAM 150
Query: 263 KID-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS--KEGSKGRISPYNSVLYGLY 319
+++ G+ N Y+ L+ L G + LK++++ + G + +S +N ++ L
Sbjct: 151 EVEFGVVANTHFYNFLLNVLVDGNK----LKLVEIAHSNMVSRGIRPDVSTFNILIKALC 206
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R +Q A+ +++ME L P + + GF +GN++ A R +QM+E G V V
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266
Query: 378 IYDCLIHAYCQEERVREASELMKEMT-GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ L++ +C+E R+ EA ++EM+ G+ P TFN +++GL + G+V AL++++
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDM 326
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+R G P Y+ LI LC+ G A +L QM+ + P+ +T+N+++ L +
Sbjct: 327 MLR---EGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCK 383
Query: 497 Q 497
+
Sbjct: 384 E 384
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/542 (24%), Positives = 253/542 (46%), Gaps = 66/542 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
++S+F +IR +AR + + +A L+ T S+ N+++ LV+ ++LA Y
Sbjct: 154 NDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIY 213
Query: 69 RKKMMASGVQGDDYTYAILMKGLCL---TNRVG--------------------------- 98
+++ SGV + YT I++ LC +VG
Sbjct: 214 -QEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSS 272
Query: 99 -----DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ F+L+H M S+G P YNT+I+ LCK+GK RA+ + ++M P+ T
Sbjct: 273 QGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 332
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ L+ CK+ + V + S VPD+V + ++ L G + A+
Sbjct: 333 YRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 392
Query: 210 EQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
E G + ++G CR EM ++GC +V TYN ++ C+ +L
Sbjct: 393 EAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 452
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A +FN+M G+ + T LI G C G + + +++ + M++ + K + YN+
Sbjct: 453 EADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKR--IKLDVVTYNT 510
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+L G + D A E M +++ P + S+ + C G++ +A R +D+MI +
Sbjct: 511 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKS 570
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P V+I + +I YC+ + +++M G++P ++NT++ G ++ N+ A
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAF 630
Query: 432 KLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
LV+ E+ +G G +P Y+ ++ C + + A +L +M+ +G+ PD T+ S
Sbjct: 631 GLVKKMEEKQG---GLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTS 687
Query: 490 LL 491
L+
Sbjct: 688 LI 689
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 197/420 (46%), Gaps = 64/420 (15%)
Query: 34 TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+D+ SR ++ P L F+S++ + + ++D A ++ + +G+ D+ Y IL++G C
Sbjct: 354 SDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYF-NSVKEAGLIPDNVIYTILIQGYC 411
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
+ + L + M +G + V YNT++H LCK +G A L ++M E P+
Sbjct: 412 RKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSY 471
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T +ILI +CK NL NA+ L +K DVVT +L+ VG + A EI
Sbjct: 472 TLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIW--- 528
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+M K LP +++IL+++ C G L A V+++M I
Sbjct: 529 ----------------ADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIK 572
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ +++I+G C G DG L+ M EG YN+++YG +E +A
Sbjct: 573 PTVMICNSMIKGYCRSGNASDGEIFLEKM--ISEGFVPDCISYNTLIYGFVKEENMSKAF 630
Query: 329 EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG-VPNVVIYDCLIHAYC 387
+K+ME+ ++GG VP+V Y+ ++H +C
Sbjct: 631 GLVKKMEE--------------------------------KQGGLVPDVFTYNSILHGFC 658
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+E +++EA ++++M G P ST+ ++++G Q N+ A + +E ++ RG P
Sbjct: 659 RENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ---RGFSP 715
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 201/461 (43%), Gaps = 71/461 (15%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
S +D + +L++ ++ + ++ +++S+G + N LI SL + G V
Sbjct: 149 SNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVEL 208
Query: 135 ARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A + ++ N T +I++ A CK+ + L + G PD+VT ++
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLIS 268
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
S G ++EE+ E + M KG P V TYN +I+ C+ G
Sbjct: 269 AYSSQG-------LMEEAFE------------LMHAMPSKGFSPGVYTYNTVINGLCKHG 309
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ A +VF +M G+S + TY +L+ C G D ++ + D + + P
Sbjct: 310 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG---DAVETENIFSDMRSRD---VVP 363
Query: 311 ----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
++S++ R D+AL Y +++ L P V ++ I G+C G + +A
Sbjct: 364 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLR 423
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++M+++G +VV Y+ ++H C+ + + EA +L EMT G P + T ++ G C+
Sbjct: 424 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKL 483
Query: 425 GNVGTALKLVEE----------------------------------DMRGIGRGSLPGSG 450
GN+ A++L ++ DM + + LP
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM--VSKEILPTPI 541
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+S L+ ALC KG A + +M+ K I P + NS++
Sbjct: 542 SFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMI 582
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 161/376 (42%), Gaps = 31/376 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +++ R+ ++ + + V + P I+ ++ ++ +
Sbjct: 363 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNL 422
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R +M+ G D TY ++ GLC +G+ KL + M RG+ P+S LI CK
Sbjct: 423 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCK 482
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M+E + VT++ L+ + K ++ A + S +P ++
Sbjct: 483 LGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 542
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LCS G + +A + + EM K P V N +I
Sbjct: 543 FSILVNALCSKGHLSEAFRVWD-------------------EMISKSIKPTVMICNSMIK 583
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC +G M +G + ++Y+TLI G + +++ ME+ + G
Sbjct: 584 GYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGL 643
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV--DRSLK---ILGFCVDGNVED 359
+ YNS+L+G RENQ EA L++M R V DRS I GF N+ +
Sbjct: 644 VPDVFTYNSILHGFCRENQMKEAEAVLRKM---IERGVNPDRSTYTSLINGFVSQDNLTE 700
Query: 360 AKRCFDQMIEEGGVPN 375
A R D+M++ G P+
Sbjct: 701 AFRFHDEMLQRGFSPD 716
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 28/214 (13%)
Query: 307 RISPYNSVLYGLYR-ENQQDEALEYLKQMEKLFPRAVDRSLKILG----FCVDGNVEDAK 361
R++P +V+ LYR N ++ Q+ FP SL + G + DA+
Sbjct: 65 RLNPL-AVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQ 123
Query: 362 RCFDQMIEEGGVPNVVI-----------------YDCLIHAYCQEERVREASELMKEMTG 404
C +MI GV V I +D LI + Q ++REA E +
Sbjct: 124 SCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLLRS 183
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKALCEKG 463
GY N ++ L R G V A ++ +E R G+G + ++ ALC+ G
Sbjct: 184 KGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYT----LNIMVNALCKDG 239
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ L ++ KG+ PD +T+N+L+ S Q
Sbjct: 240 KMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 32/455 (7%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + N ++D + D + A A M++ G++ TY ++KGLC + ++
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALV-DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWE 247
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
+ M GV P+ + LI C+ G++ A + +M +P+ V+FS LI +
Sbjct: 248 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFA 307
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ + +A+ L + FG VPD V T V+ C G + DA+ + +E
Sbjct: 308 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV--------- 358
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
GC GCLP+V TYN L++ C+ L A + N+M+ G+ + T+ TLI
Sbjct: 359 -GC---------GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 408
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--K 336
G C G++D L++ M + + + I YN+++ G+ R+ D+A + M +
Sbjct: 409 HGYCIEGKLDKALQLFDTMLNQR--LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+FP V S+ I C G VEDA D+MI +G +PN++ Y+ +I YC+ V +
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+ +++M + P T+NT++ G ++ + A KL+ + P Y+ LI
Sbjct: 527 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK---EKVQPDVVTYNMLI 583
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G Q A + +M KGI PD T+ S++
Sbjct: 584 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 217/449 (48%), Gaps = 32/449 (7%)
Query: 42 MTPSLKIFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P + +NS+L L + + D A + K+M GV D ++ IL+ G C + +
Sbjct: 222 LKPGIVTYNSVLKGLCRSGMWDKAWEVF-KEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICA 156
K+ M+ RG+KP+ V ++ LI + GK+ A + + +M P+ V ++++I
Sbjct: 281 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 340
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
+C+ + +AL + ++ G +PDVVT +L LC R++DA +G
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA---------EG---- 387
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
L EM +G P++ T+ LI YC G LD AL +F+ M + + VTY+T
Sbjct: 388 ------LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 441
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
LI G+C G +D + M S+E ++ Y+ ++ + Q ++A +L +M
Sbjct: 442 LIDGMCRQGDLDKANDLWDDMH-SREIFPNHVT-YSILIDSHCEKGQVEDAFGFLDEMIN 499
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ + P + + I G+C GNV ++ +M+ P+++ Y+ LIH Y +E+++ +
Sbjct: 500 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 559
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A +L+ M P T+N +++G GNV A + E + +G P Y
Sbjct: 560 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE---KMCAKGIEPDRYTYMS 616
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPD 483
+I G + A L +M+ +G PD
Sbjct: 617 MINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 38/421 (9%)
Query: 96 RVGDG---FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
R GD L+ M S+G+KP V YN+++ LC++G +A + +M++ P+
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+F+ILI +C+ + AL + ++ G PD+V+ + ++ L
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF---------------- 306
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
R GK+ +L+EM G +P+ Y ++I +C G++ AL V ++M G
Sbjct: 307 ---ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 363
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ VTY+TL+ GLC R+ D +L M + G + + ++++G E + D+AL
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRE--RGVPPDLCTFTTLIHGYCIEGKLDKAL 421
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ M ++L P V + I G C G+++ A +D M PN V Y LI ++
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C++ +V +A + EM G LP T+N+++ G CR GNV K +++ M + + S
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM--VNKVS- 538
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS-----QQTTWL 501
P Y+ LI ++ A LL M + + PD +T+N L+ S Q+ W+
Sbjct: 539 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 598
Query: 502 L 502
Sbjct: 599 F 599
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 186/396 (46%), Gaps = 67/396 (16%)
Query: 136 RSLMSDMEEPNDVTFSILICAYCK--EENLVNALVL-LEKSFSFGFVPDVVTITKVLELL 192
R + S E N T +I++ YCK E + V+A++ +EK F PDVVT +++
Sbjct: 145 RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVF---PDVVTHNVMVD-- 199
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+ R G + + M KG P + TYN ++ C +G+
Sbjct: 200 -----------------ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMW 242
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A +VF +M G++ + ++ LI G C G I++ LKI + M G K + +
Sbjct: 243 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR--HRGIKPDLVSF- 299
Query: 313 SVLYGLY-RENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
S L GL+ R + D A+ YL++M L P V ++ I GFC G + DA R D+M+
Sbjct: 300 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 359
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G +P+VV Y+ L++ C+E R+ +A L+ EM G P TF T++ G C +G +
Sbjct: 360 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 419
Query: 430 ALKLVE----------------------------------EDMRGIGRGSLPGSGHYSPL 455
AL+L + +DM R P YS L
Sbjct: 420 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH--SREIFPNHVTYSIL 477
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I + CEKG + A L +M+ KGILP+ +T+NS++
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 25/330 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD I+ VI G RA +++D ++ D + P + +N++L+ L KE L
Sbjct: 329 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M GV D T+ L+ G C+ ++ +L M ++ ++P+ V YNTLI +C+
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A L DM PN VT+SILI ++C++ + +A L++ + G +P+++T
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C R G V G +FL++M P++ TYN LI
Sbjct: 509 YNSIIKGYC-------------------RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 549
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y + + A + N M+ + + + VTY+ LI G G + + I + M +G
Sbjct: 550 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM--CAKGI 607
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ Y S++ G EA + +M
Sbjct: 608 EPDRYTYMSMINGHVTAGNSKEAFQLHDEM 637
>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
Length = 822
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 227/487 (46%), Gaps = 33/487 (6%)
Query: 32 KATDLVSR----FNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAI 86
KATD+ R + P + N +L +LV++ D AR Y +M+ D+Y+ +
Sbjct: 151 KATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLY-DEMLGEDSGADNYSTCV 209
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L++GLCL RV +G KL+ G P+ V YN LI C+ G +GR L+ +ME
Sbjct: 210 LVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKG 269
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P VT+ LI K+ +L L + G P+V V++ LC A+
Sbjct: 270 FLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAM 329
Query: 203 EILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
IL++ G G V+ FL+E R+ PN +Y LI +
Sbjct: 330 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 389
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G L +A D+ +M G + + VT+ LI GL G++ + L + + M + +
Sbjct: 390 CMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV 449
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN ++ GL +++ A L++M + + P + I GF N+ DA++ F
Sbjct: 450 NI--YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M +G P++V + +I YCQ + EA M M G +P T+ TV+SG +Q
Sbjct: 508 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 567
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
GN+ AL+ + DM I R P YS LI C+ G SA L M + + P+
Sbjct: 568 GNLNGALRWL-CDM--IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 624
Query: 485 LTWNSLL 491
+T+ L+
Sbjct: 625 VTYTILI 631
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 189/449 (42%), Gaps = 64/449 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL + R + P+ + ++ +A +
Sbjct: 342 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDL 401
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+MM G D T+ L+ GL + +V + + M R V P+ IYN LI LCK
Sbjct: 402 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 461
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A++++ +M E P++ ++ LI + + ENL +A + E G PD+V+
Sbjct: 462 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS 521
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ C G + +A+ + + G + G + G R+L +M
Sbjct: 522 CNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMI 581
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++ C PNV TY+ LI+ YC+TG DSA +F +M+ + +S N VTY LI G +
Sbjct: 582 KRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI------GSLF 635
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE-------NQQDEALEYL-KQMEKLFPR 340
K+L+ GLY E + D L YL + P
Sbjct: 636 KKDKVLRA--------------------GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPC 675
Query: 341 AVDRSLKILGFCVDGNVEDAKRC----FDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
++ C + + K F +++ + G P Y+ +I + C+ +REA
Sbjct: 676 VIN------SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 729
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+ M GY+P TF ++L G C G
Sbjct: 730 DFKNRMAKKGYVPNPITFLSLLYGFCSVG 758
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 43/306 (14%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK-------------------I 264
L+ M G P L+++Y + G+L A D+ ++ +
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 180
Query: 265 DGISWNFVT--YD---------------TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ W+ YD L+RGLC GR+++GLK+++ + G
Sbjct: 181 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGA--GCIPH 238
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN ++ G R L L +ME P V I G++E F
Sbjct: 239 VVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFL 298
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M + G PNV IY+ +I A C+ +A ++K+M G P TFNT+++GLC +G
Sbjct: 299 EMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 358
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+V A + E +R R P Y+PLI C +G +AS LL++M+G+G PD +
Sbjct: 359 HVRKAEHFLREAIR---RELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVV 415
Query: 486 TWNSLL 491
T+ +L+
Sbjct: 416 TFGALI 421
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D+ D M + G + L+ G + + + + + + GS ++
Sbjct: 114 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLRE-QYGSLPEVTHC 172
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIE 369
N +L L + + D+A + +M A + S +L G C++G VE+ + +
Sbjct: 173 NRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWG 232
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G +P+VV Y+ LI YC+ + L+ EM G+LP T+ ++++ L ++G++
Sbjct: 233 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK 292
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
L E MR RG P Y+ +I ALC+ A ++L QM G PD +T+N+
Sbjct: 293 IGSLFLE-MRK--RGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNT 349
Query: 490 LLICLSQQ 497
L+ L +
Sbjct: 350 LITGLCHE 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PDE + TVI G + +N ++ D++ R P++ ++S+++ K D D A
Sbjct: 552 PDEFTYTTVISGYAKQGNLNGALRWLCDMIKR-KCKPNVVTYSSLINGYCKTGDTDSAEG 610
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
+ M A + + TY IL+ L ++V M PN V + L
Sbjct: 611 LF-ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669
Query: 123 -------IHSLC--------KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL 167
I+S+C K+ + + L+ D+ +P + ++ +I + C+ L AL
Sbjct: 670 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 729
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+ G+VP+ +T +L CSVG+ M+ IL +Q
Sbjct: 730 DFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNWRTILPNEFQQ 773
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 214/433 (49%), Gaps = 28/433 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I GL +AR +K + + + N + + I+D L K+ +
Sbjct: 111 DAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMF 169
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M+ +G+ D Y+ LM GLC R+ + + M+ RG+ + YN+LIH L +
Sbjct: 170 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 229
Query: 130 G---KVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G +V +LM D P+ TF+ILI CKE + A +LE G PD++T
Sbjct: 230 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTY 289
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ LC VG++ DA ++ E + +G NV +YNILI+
Sbjct: 290 NTLMNGLCLVGQLEDATKLFES-------------------LADRGIKLNVFSYNILING 330
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC+ +D A +F +M+ G+ + VTY+TLI LC GR+ K+ M+ G
Sbjct: 331 YCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC--GQF 388
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
++S Y +L GL + +EA++ + ++K + IL G C G +E+A +
Sbjct: 389 LKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQ 448
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
FD++ + G P+ + Y+ LI+ C + + EA +L+ +M G LP + TFN ++ L +
Sbjct: 449 FDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLK 508
Query: 424 QGNVGTALKLVEE 436
+ + A++L+EE
Sbjct: 509 ENEIHEAIQLLEE 521
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 211/463 (45%), Gaps = 72/463 (15%)
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G + D T L+KG+ + N + D +L M +G+ ++ Y LI+ LCK K
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 133 GRARSLMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
G A L M+ + + T+ ++I + CK+ AL + + G +PDVV + ++
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ LC GR+ +A+E F KEME +G +V TYN LI
Sbjct: 189 DGLCRFGRLKEALE-------------------FFKEMEGRGISADVYTYNSLIHGLSRA 229
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G+ N M G S + T+ LI GLC G++ + +IL+LM +G + I
Sbjct: 230 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMH--HKGKEPDIL 287
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK---------ILGFCVDGNVEDA 360
YN+++ GL Q ++A KLF DR +K I G+C D +++A
Sbjct: 288 TYNTLMNGLCLVGQLEDA-------TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA 340
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R F++M +G P+ V Y+ LI A CQ RVR A +L EM G ST+ +L G
Sbjct: 341 FRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDG 400
Query: 421 LCRQGNVGTALKLVEEDMR---------------GIGR-----------------GSLPG 448
LC+ G++ A+ L + + G+ R G P
Sbjct: 401 LCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPD 460
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ Y+ LI LC KG A LL QM KG LPD +T+N ++
Sbjct: 461 TIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVII 503
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 152/336 (45%), Gaps = 55/336 (16%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCRF------ 223
GF PD VT+T +++ + + DAV++ +E E+G G K G C+
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 224 --LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
L E + C +V TY ++I S C+ G+ ALD+F++M GI + V Y +L+ GL
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C GR+ + L+ + ME G + YNS+++GL R E +L
Sbjct: 192 CRFGRLKEALEFFKEMEG--RGISADVYTYNSLIHGLSRAGLWKEVTWFL---------- 239
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ M++ G P+ + LI C+E +V EA ++++
Sbjct: 240 -----------------------NLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 276
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM-RGIGRGSLPGSGHYSPLIKALC 460
M G P T+NT+++GLC G + A KL E RGI Y+ LI C
Sbjct: 277 MHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVF----SYNILINGYC 332
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ A L +M KG+ P +T+N+L+ L Q
Sbjct: 333 KDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 147/297 (49%), Gaps = 27/297 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
PD F +I GL + + + + +L+ P + +N++++ LV + D +
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + + G++ + ++Y IL+ G C ++ + F+L M+ +G+KP++V YNTLI +L
Sbjct: 309 F--ESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGAL 366
Query: 127 CKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C++G+V A+ L +M+ T+ +L+ CK +L A+ L + P++
Sbjct: 367 CQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNI 426
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ +L+ +C G+ LEE+ +Q E+ + G P+ YNIL
Sbjct: 427 EVFSILLDGMCRAGK-------LEEAWKQ------------FDEISKNGLEPDTIAYNIL 467
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
I+ C G+L A+ + M+ G + +T++ +I+ L I + +++L+ M +
Sbjct: 468 INGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRN 524
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 19/252 (7%)
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNV 357
+ K G+K +SP+ S+ R + P AV + + G ++ +
Sbjct: 39 KSEKIGTKASLSPFESL-----RAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGI 93
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
DA + FD+M E+G + Y LI+ C+ + A +L ++M G+ + T+ +
Sbjct: 94 PDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVF-TYGMI 152
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ LC+ G AL + E IG G LP YS L+ LC G + A +M G
Sbjct: 153 IDSLCKDGMTTEALDMFSE---MIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 209
Query: 478 KGILPDYLTWNSLLICLS-----QQTTWLLLLLLN-----EMVSFVMVVHELSAKEKRCK 527
+GI D T+NSL+ LS ++ TW L L+++ + +F +++ L + K +
Sbjct: 210 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269
Query: 528 LRSLNHLAHGAG 539
+ + L H G
Sbjct: 270 AQQILELMHHKG 281
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
++IL+ G+C ++ + +K + G++P+++ YN LI+ LC G + A L+ ME
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQME 488
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
E P+ +TF+++I KE + A+ LLE+ + F PD + +L
Sbjct: 489 EKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR-K 70
S + ++ GL + + + + + + P++++F+ +LD + + L A+ +
Sbjct: 392 STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAG-KLEEAWKQFD 450
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ +G++ D Y IL+ GLC + + KLL M+ +G P+S+ +N +I +L K
Sbjct: 451 EISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKEN 510
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
++ A L+ +M P++ S+L+C + ALV L + G
Sbjct: 511 EIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNALQKG 561
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 205/441 (46%), Gaps = 27/441 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M + G+ D YT AI++ C NRV GF +L + G +P++ + TLI LC
Sbjct: 98 KQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVE 157
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK+G A L M +PN VT+ LI CK N A+ LL P+V+T
Sbjct: 158 GKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCRF---------LKEMER 229
+++ L +V +A+ I E +G V G C+F + EM
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD 277
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+PNV + L+ + C+ G++ A DV + M G+ + VTY L+ G C +D+
Sbjct: 278 SKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDE 337
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
K+ M ++G + Y++++ G + + D+A+ ++M +L P V +
Sbjct: 338 ADKVFDTM--VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C G + DA F +M+ G +P++V Y L+ C+ + +A ++K + G
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P ++N V+ G+CR G + A L +G P Y+ +I LC +G
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLS---SKGLHPDVWTYTIMINGLCLQGLLAE 512
Query: 468 ASMLLVQMVGKGILPDYLTWN 488
A+ L +M G PD T+N
Sbjct: 513 ATKLFREMNTDGCSPDDCTYN 533
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 226/476 (47%), Gaps = 34/476 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + F T+IRGL I + + D + P+ + +++ L K + +RA
Sbjct: 142 PDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK--VGNSRAAI 199
Query: 69 R--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
R + M+ + + TY ++ L +V + + M ++G+ PN YN++IH L
Sbjct: 200 RLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGL 259
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK + +LM++M + PN V F+ L+ A CKE + A +++ G PDV
Sbjct: 260 CKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDV 319
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T +++ C + +A ++ + M RKGC PNV +Y+ L
Sbjct: 320 VTYTALMDGHCLRSEMDEADKVFD-------------------TMVRKGCAPNVISYSTL 360
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ YC+ +D A+ +F +M + N VTY+TLI GLC GR+ D + + M S
Sbjct: 361 INGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVAS-- 418
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDA 360
G + Y +L L + D+A+ LK +E L P ++ I G C G +E A
Sbjct: 419 GQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAA 478
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G P+V Y +I+ C + + EA++L +EM G P T+N + G
Sbjct: 479 GDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRG 538
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
R +A++L++E +GRG + + +++ L + G QS +L + V
Sbjct: 539 FLRNNETLSAIQLLQE---MLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 217/455 (47%), Gaps = 32/455 (7%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + N ++D + D + A A M++ G++ TY ++KGLC + ++
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALV-DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWE 186
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
+ M GV P+ + LI C+ G++ A + +M +P+ V+FS LI +
Sbjct: 187 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFA 246
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ + +A+ L + FG VPD V T V+ C G + DA+ + +E
Sbjct: 247 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDE----------M 296
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
GC GCLP+V TYN L++ C+ L A + N+M+ G+ + T+ TLI
Sbjct: 297 VGC---------GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 347
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--K 336
G C G++D L++ M + + + I YN+++ G+ R+ D+A + M +
Sbjct: 348 HGYCIEGKLDKALQLFDTMLNQR--LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+FP V S+ I C G VEDA D+MI +G +PN++ Y+ +I YC+ V +
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+ +++M + P T+NT++ G ++ + A KL+ + P Y+ LI
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK---EKVQPDVVTYNMLI 522
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G Q A + +M KGI PD T+ S++
Sbjct: 523 NGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 215/445 (48%), Gaps = 32/445 (7%)
Query: 42 MTPSLKIFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P + +NS+L L + + D A + K+M GV D ++ IL+ G C + +
Sbjct: 161 LKPGIVTYNSVLKGLCRSGMWDKAWEVF-KEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICA 156
K+ M+ RG+KP+ V ++ LI + GK+ A + + +M P+ V ++++I
Sbjct: 220 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 279
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
+C+ + +AL + ++ G +PDVVT +L LC R++DA +G
Sbjct: 280 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA---------EG---- 326
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
L EM +G P++ T+ LI YC G LD AL +F+ M + + VTY+T
Sbjct: 327 ------LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 380
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
LI G+C G +D + M S+E ++ Y+ ++ + Q ++A +L +M
Sbjct: 381 LIDGMCRQGDLDKANDLWDDMH-SREIFPNHVT-YSILIDSHCEKGQVEDAFGFLDEMIN 438
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ + P + + I G+C GNV ++ +M+ P+++ Y+ LIH Y +E+++ +
Sbjct: 439 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 498
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A +L+ M P T+N +++G GNV A + E + +G P Y
Sbjct: 499 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFE---KMCAKGIEPDRYTYMS 555
Query: 455 LIKALCEKGGFQSASMLLVQMVGKG 479
+I G + A L +M+ +G
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRG 580
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 38/421 (9%)
Query: 96 RVGDG---FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
R GD L+ M S+G+KP V YN+++ LC++G +A + +M++ P+
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+F+ILI +C+ + AL + ++ G PD+V+ + ++ L
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF---------------- 245
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
R GK+ +L+EM G +P+ Y ++I +C G++ AL V ++M G
Sbjct: 246 ---ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 302
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ VTY+TL+ GLC R+ D +L M + G + + ++++G E + D+AL
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRE--RGVPPDLCTFTTLIHGYCIEGKLDKAL 360
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ M ++L P V + I G C G+++ A +D M PN V Y LI ++
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C++ +V +A + EM G LP T+N+++ G CR GNV K +++ M + + S
Sbjct: 421 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM--VNKVS- 477
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS-----QQTTWL 501
P Y+ LI ++ A LL M + + PD +T+N L+ S Q+ W+
Sbjct: 478 PDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWI 537
Query: 502 L 502
Sbjct: 538 F 538
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 186/396 (46%), Gaps = 67/396 (16%)
Query: 136 RSLMSDMEEPNDVTFSILICAYCK--EENLVNALVL-LEKSFSFGFVPDVVTITKVLELL 192
R + S E N T +I++ YCK E + V+A++ +EK F PDVVT +++
Sbjct: 84 RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVF---PDVVTHNVMVD-- 138
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+ R G + + M KG P + TYN ++ C +G+
Sbjct: 139 -----------------ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMW 181
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A +VF +M G++ + ++ LI G C G I++ LKI + M G K + +
Sbjct: 182 DKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMR--HRGIKPDLVSF- 238
Query: 313 SVLYGLY-RENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
S L GL+ R + D A+ YL++M L P V ++ I GFC G + DA R D+M+
Sbjct: 239 SCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVG 298
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G +P+VV Y+ L++ C+E R+ +A L+ EM G P TF T++ G C +G +
Sbjct: 299 CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDK 358
Query: 430 ALKLVE----------------------------------EDMRGIGRGSLPGSGHYSPL 455
AL+L + +DM R P YS L
Sbjct: 359 ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMH--SREIFPNHVTYSIL 416
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I + CEKG + A L +M+ KGILP+ +T+NS++
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 452
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 25/330 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD I+ VI G RA +++D ++ D + P + +N++L+ L KE L
Sbjct: 268 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M GV D T+ L+ G C+ ++ +L M ++ ++P+ V YNTLI +C+
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A L DM PN VT+SILI ++C++ + +A L++ + G +P+++T
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C R G V G +FL++M P++ TYN LI
Sbjct: 448 YNSIIKGYC-------------------RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 488
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y + + A + N M+ + + + VTY+ LI G G + + I + M +G
Sbjct: 489 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM--CAKGI 546
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ Y S++ G EA + +M
Sbjct: 547 EPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR- 65
PPD F T+I G ++ ++ D + + P + +N+++D + ++ D+D A
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396
Query: 66 --------------------------------AF-YRKKMMASGVQGDDYTYAILMKGLC 92
AF + +M+ G+ + TY ++KG C
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
+ V G K L M V P+ + YNTLIH K K+ A L++ ME +P+ V
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVV 516
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+++LI + N+ A + EK + G PD T ++ + G +A ++ +E
Sbjct: 517 TYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Query: 209 GEQGRLGKVKGG 220
++G+ + G
Sbjct: 577 LQRGKEKRRAAG 588
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 215/458 (46%), Gaps = 38/458 (8%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + N ++D + D+D A A M G++ T+ ++KGLC R +
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALV-DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKE 248
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+ M V P+ +N LI C+ G+V A +M++ P+ V+FS LI +
Sbjct: 249 VFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFS 308
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ +A L + G VPD V T V+ C G + +A+ + +E
Sbjct: 309 TRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE----------- 357
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M GCLP+V TYN L++ C+ L A ++ N+MK G++ + T+ TLI
Sbjct: 358 --------MVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLI 409
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--K 336
G C G + L++ + + + + YNS++ G+ R+ +A E M +
Sbjct: 410 HGYCRDGNFEKALQLFDTLLHQR--LRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+FP V S+ I C G VE+A D+M+ +G +PN++ Y+ +I YC+ V++
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYS 453
+ +++M LP TFNT++ G ++ N+ A ++E++M P + Y+
Sbjct: 528 QFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM------VQPDAVTYN 581
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+I E+G + A + +M GI PD T+ SL+
Sbjct: 582 MIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 213/462 (46%), Gaps = 29/462 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD +I RA ++ + D ++ + P + FNS+L L K D A+
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEV 249
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R M V D ++ IL+ G C V + K M+ RGV P+ V ++ LI
Sbjct: 250 FRA-MDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFS 308
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GK+ A + + +M+ P+ V ++++I +C+ ++ AL + ++ G +PDVV
Sbjct: 309 TRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVV 368
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +L LC R++DA E+L E E+G R G + + +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ P+V YN LI C G L A ++++DM I N VTY LI C G++
Sbjct: 429 LHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQV 488
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
++ L M +G+ I YNS++ G R + ++L++M + + P + +
Sbjct: 489 EEAFGFLDEM--VSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+ + N+ A F+ M +E P+ V Y+ +I+ + ++ + EA + K+M
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
G P T+ ++++G GN A +L +E M RG P
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMH---RGFAP 645
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 194/429 (45%), Gaps = 71/429 (16%)
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
R ++S E N T +I++ +YCK A ++ + PDVVT +++
Sbjct: 146 RLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID----- 200
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
+ R G V + M KG P + T+N ++ C+ D A
Sbjct: 201 --------------ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKA 246
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+VF M ++ + +++ LI G C G +++ +K + M+ + G + + S L
Sbjct: 247 KEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQ--QRGVTPDVVSF-SCL 303
Query: 316 YGLYR-ENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
GL+ + D A YL++M+ L P V ++ I GFC G++ +A R D+M+ G
Sbjct: 304 IGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGC 363
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+P+VV Y+ L++ C++ R+ +A EL+ EM G P TF T++ G CR GN AL+
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423
Query: 433 LVE----------------------------------EDMRGIGRGSLPGSGHYSPLIKA 458
L + +DM R P YS LI +
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMH--AREIFPNHVTYSILIDS 481
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS------QQTTWLLLL--LLNE 508
CEKG + A L +MV KG LP+ +T+NS++ C S QQ ++ +L +
Sbjct: 482 HCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPD 541
Query: 509 MVSFVMVVH 517
+++F ++H
Sbjct: 542 LITFNTLIH 550
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 132/317 (41%), Gaps = 46/317 (14%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N T NI++ SYC++ D A V ++M+ + + VT++ LI G +D + ++
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD 354
M + +G K I +NSV + G C
Sbjct: 216 DSM--ANKGLKPGIVTFNSV---------------------------------LKGLCKH 240
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ AK F M + P+V ++ LI +C+ V EA + KEM G P +F
Sbjct: 241 RRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSF 300
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+ ++ +G + A + E M+G+G +P Y+ +I C G A + +
Sbjct: 301 SCLIGLFSTRGKMDHAAAYLRE-MKGLGL--VPDGVIYTMVIGGFCRAGSMSEALRVRDE 357
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVSFVMVVHELSAKEKRCKLRSLNH 533
MVG G LPD +T+N+LL L +Q L LLNEM E C +L H
Sbjct: 358 MVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM-------KERGVTPDLCTFTTLIH 410
Query: 534 LAHGAGSVWLGLRIHDT 550
G+ L++ DT
Sbjct: 411 GYCRDGNFEKALQLFDT 427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCL 93
++VS+ N+ P++ +NSI+ + ++ + F +KMM + D T+ L+ G
Sbjct: 497 EMVSKGNL-PNIMTYNSIIKGYCRSGNVKKGQQFL-QKMMQDNILPDLITFNTLIHGYIK 554
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
+ F + ++M+ V+P++V YN +I+ + G + A + M EP+ T
Sbjct: 555 EENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYT 614
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+ LI + N A L ++ GF PD
Sbjct: 615 YMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARA 66
PD F T+I G + ++ +++ + + P +N I++ ++ + R
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRV 599
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
F KKM ASG++ D YTY L+ G + F+L M RG P+
Sbjct: 600 F--KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 242/521 (46%), Gaps = 66/521 (12%)
Query: 32 KATDLVSR----FNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAI 86
+A D+ R F P ++ +NS+L+ L++ + D A +F+ G+ + TY I
Sbjct: 71 QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLY-FETMGLSPNLQTYNI 129
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L+K C + +LL+ M +G P+ Y TLI+SL KNG + A L +M E
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 189
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVGRVMDA 201
P+ ++ILI + K+ +++NA + E+ V P++ + ++ LC G+ ++
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249
Query: 202 VEILE--ESGEQGR--------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
EI + E+G+ G + G R KEM G P+V YN +++
Sbjct: 250 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 309
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS----- 300
Y G ++ L+++ M+ +G V+Y+ LIRGL ++D+ + I +L+ +
Sbjct: 310 YLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 368
Query: 301 ------------------------KEGSKGR----ISPYNSVLYGLYRENQQDEALEYLK 332
+E GR Y+S++ GL RE + DE L
Sbjct: 369 SMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLD 428
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
QM K P + I GF +EDA R F M+ +G P VV Y+ LI+ + E
Sbjct: 429 QMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAE 488
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R EA L+KEM G+ P T++ +++GLC+ + AL L + + +G P
Sbjct: 489 RFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLW---CQALEKGFKPDVK 545
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ +I LC G + A L +M + +P+ +T N+L+
Sbjct: 546 MHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM 586
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 232/527 (44%), Gaps = 64/527 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I L + ++D +K D + +TP + +N ++D K+ DI A
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 216
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + V + +Y +++ GLC + + F++ H MK + Y+TLIH LC
Sbjct: 217 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 276
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCK----EENL--------------VN 165
+G + A + +M E P+ V ++ ++ Y + EE L V+
Sbjct: 277 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS 336
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLEL----------------LCSVGRVMDAVEILEESG 209
+L+ F V + ++I ++L LC G + A+ ILEE+
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA- 395
Query: 210 EQGR--------LGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVL 252
E GR + G CR L +M + GC PN N +I+ + L
Sbjct: 396 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKL 455
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ AL F +M G VTY+TLI GL R + +++ M ++G K + Y+
Sbjct: 456 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEM--LQKGWKPNMITYS 513
Query: 313 SVLYGLYRENQQDEALE-YLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ GL + + D AL + + +EK F P ++ I G C G VEDA + + +M +
Sbjct: 514 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
VPN+V ++ L+ + + AS++ + +G P ++N L GLC + A
Sbjct: 574 NCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDA 633
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ + + + RG LP + ++ L++ G+ + M G
Sbjct: 634 VGFLND---AVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASMKG 677
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/534 (24%), Positives = 225/534 (42%), Gaps = 79/534 (14%)
Query: 17 VIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDI-----------D 62
VI+ L + + + D V+RF + TP +F+ IL L + D
Sbjct: 13 VIKLLKSEKNPHSALSIFDSVTRFPGYSHTPY--VFHHILKRLFDPKLVAHAYAKNSMPD 70
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A +++ G Q +Y L+ L +N+ + ++ G+ PN YN L
Sbjct: 71 QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNIL 130
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I C+ + +A+ L++ M P+ ++ LI + K + +AL L ++ G
Sbjct: 131 IKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGV 190
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PDV +++ G +++A EI E R LK PN+ +
Sbjct: 191 TPDVACYNILIDGFFKKGDILNASEIWE---------------RLLKG---PSVYPNIPS 232
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN++I+ C+ G D + ++++ MK + + TY TLI GLC G +D ++ + M
Sbjct: 233 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM- 291
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---------------LFPRA-V 342
++ G + YN++L G R + +E LE K MEK LF A V
Sbjct: 292 -AENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKV 350
Query: 343 DRSLKIL--------------------GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D ++ I G C +G + A ++ G + Y +
Sbjct: 351 DEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSM 410
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I+ C+E R+ E + ++ +MT HG P N V++G R + AL+ +
Sbjct: 411 INGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGN---MVS 467
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+G P Y+ LI L + F A L+ +M+ KG P+ +T++ L+ L Q
Sbjct: 468 KGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQ 521
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 215/473 (45%), Gaps = 36/473 (7%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ +N++L K+ A M + GV D TY +L+ LC +NR+ G+
Sbjct: 265 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 324
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
LL M+ R + PN V YNTLI+ GKV A L+++M PN VTF+ LI +
Sbjct: 325 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 384
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
E N AL + + G P V+ +L+ LC + +
Sbjct: 385 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC----------------KNAEFDLAR 428
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
G F M+R G TY +I C+ G LD A+ + N+M DGI + VTY LI
Sbjct: 429 G---FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G C GR +I+ + G I Y++++Y R EA+ + M E
Sbjct: 486 NGFCKVGRFKTAKEIVCRIYRVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEG 543
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
++ + C G V +A+ M +G +PN V +DCLI+ Y +A
Sbjct: 544 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 603
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH---YS 453
+ EMT G+ P T+ ++L GLC+ G++ A K ++ ++P + Y+
Sbjct: 604 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS------LHAVPAAVDTVMYN 657
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
L+ A+C+ G A L +MV + ILPD T+ SL+ L ++ ++ +L
Sbjct: 658 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 710
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 225/512 (43%), Gaps = 38/512 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR---FNMTPSLKIFNSILDVLVKED--IDL 63
P+E + T+I G V+ A+ L++ F ++P+ FN+++D + E +
Sbjct: 336 PNEVTYNTLINGFSNE---GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ FY M A G+ + +Y +L+ GLC MK GV + Y +I
Sbjct: 393 LKMFYM--MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCKNG + A L+++M +P+ VT+S LI +CK A ++ + + G
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+ + + ++ C +G + +A+ I E +G + GKV F
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++ M G LPN +++ LI+ Y +G A VF++M G F TY +L++GLC
Sbjct: 571 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 630
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GG + + K L+ + + YN++L + + +A+ +M + P +
Sbjct: 631 GGHLREAEKFLKSLHAVPAAVDTVM--YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 688
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMK 400
+ I G C G A + G V PN V+Y C + + + + +
Sbjct: 689 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 748
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G+ P T N ++ G R G + L+ E G G P Y+ L+
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE--MGNQNGG-PNLTTYNILLHGYS 805
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
++ ++ +L ++ GILPD LT +SL++
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 837
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 26/348 (7%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N + ILI Y +E + ++L + +GF P V T +L G V+
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL------GSVV------ 209
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+SGE + FLKEM ++ P+V T+NILI+ C G + + + M+
Sbjct: 210 -KSGEDVSVWS------FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 262
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + VTY+T++ C GR +++L M+ +G + YN +++ L R N+
Sbjct: 263 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIA 320
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ L+ M K + P V + I GF +G V A + ++M+ G PN V ++ LI
Sbjct: 321 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 380
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ E +EA ++ M G P ++ +L GLC+ A MR
Sbjct: 381 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY---MRMKRN 437
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G G Y+ +I LC+ G A +LL +M GI PD +T+++L+
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 485
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 213/483 (44%), Gaps = 71/483 (14%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G +TY L+KGLC + + K L + + ++V+YNTL+ ++CK+G
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTI 185
+ +A SL +M + P+ T++ LI C++ V A++ +++ + G V P+ V
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
T ++ + G+ + E+ G R+GK++ L EM
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ PN+ TYNIL+ Y + + ++ ++ + ++GI + +T +L+ G+C ++
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847
Query: 290 GLKILQL--------------MEDSKEGSKGRIS-------------------PYNSVLY 316
GLKIL+ M SK + G I+ ++++
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L R ++ E+ L +M K + P + I G C G+++ A ++MI P
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
V ++ A + + EA+ L++ M +P ++F T++ C+ GNV AL+L
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL- 1026
Query: 435 EEDMRGIGRGSLPGSG------HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
R + G Y+ LI LC KG A L +M G G L + T+
Sbjct: 1027 --------RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1078
Query: 489 SLL 491
+L+
Sbjct: 1079 ALI 1081
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 225/552 (40%), Gaps = 85/552 (15%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTP-----SLKIFNSILDVLVKED 60
PD + +I G GR + ++V + R ++P S I+N +KE
Sbjct: 476 PDIVTYSALINGFCKVGRFKTAKEIVCR---IYRVGLSPNGIIYSTLIYNCCRMGCLKEA 532
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV--- 117
I + A M+ G D +T+ +L+ LC +V + + + M S G+ PN+V
Sbjct: 533 IRIYEA-----MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 118 --------------------------------IYNTLIHSLCKNGKVGRA----RSLMSD 141
Y +L+ LCK G + A +SL +
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647
Query: 142 MEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+ V ++ L+ A CK NL A+ L + +PD T T ++ LC G+ + A
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Query: 202 VEILEESGEQG-----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +E+ +G + G+ K G F ++M+ G P++ T N +I
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y G ++ D+ +M N TY+ L+ G R D L G
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK--RKDVSTSFLLYRSIILNGI 825
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDR---SLKILGFCVDGNVED 359
+S++ G+ N + L+ LK R VDR ++ I C +G +
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKA---FICRGVEVDRYTFNMLISKCCANGEINW 882
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M G + D ++ + R +E+ ++ EM+ G P + + +++
Sbjct: 883 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLCR G++ TA +V+E+M I P + S +++AL + G A++LL M+
Sbjct: 943 GLCRVGDIKTAF-VVKEEM--IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 999
Query: 480 ILPDYLTWNSLL 491
++P ++ +L+
Sbjct: 1000 LVPTIASFTTLM 1011
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 207/420 (49%), Gaps = 65/420 (15%)
Query: 50 NSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
N +L LVKE+ F K+M+ + + T+ ++ GLC ++ ++ MK
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGR---ARSLMSDMEE----PNDVTFSILICAYCKEEN 162
G PN V YNTLI CK G+VG+ A +++ +M E PN VTF++LI +CK+EN
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
L AL + E+ S G P VVT ++ LC+ G++ +A +L+E
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDE--------------- 363
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
M PNV TYN LI+ YC+ +L+ A ++F+++ G++ N +T++TL+ G C
Sbjct: 364 ----MLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYC 419
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME------- 335
G++++ + ++M + +G S YN ++ G RE + +E L +M+
Sbjct: 420 KFGKMEEAFLLQKVMLE--KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD 477
Query: 336 ---------------------KLFPRAVDRSLK---------ILGFCVDGNVEDAKRCFD 365
+L +D+ LK + G+C++GN+ A
Sbjct: 478 TVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRK 537
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
QM +EG NVV Y+ LI YC++ ++ +A+ L+ EM G +P +T+ + + +G
Sbjct: 538 QMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 196/410 (47%), Gaps = 41/410 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F TVI GL + +N D + + P++ +N+++D K + Y
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCK--MGRVGKMY 285
Query: 69 R-----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ K+M+ + V + T+ +L+ G C + K+ M+S+G+KP V YN+L+
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345
Query: 124 HSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ LC GK+ A+ L+ +M +PN +T++ LI YCK++ L A L + G
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+V+T +L C G++ +A +L+ K M KG LPN TY
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAF-LLQ------------------KVMLEKGFLPNASTY 446
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI +C G ++ ++ N+M+ G+ + VTY+ LI C +++ M D
Sbjct: 447 NCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLD 506
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
+G K YN +L G E AL KQMEK + V ++ I G+C G +
Sbjct: 507 --KGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
EDA ++M+E+G +PN Y+ + +EE + + + ++ GH Y
Sbjct: 565 EDANGLLNEMLEKGLIPNRTTYEII-----KEEMMEKG--FLPDIEGHLY 607
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 202/407 (49%), Gaps = 58/407 (14%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N L+ +L K + G + +M PN +TF+ +I CK L A +++
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
+GF P+VVT +++ C +GRV GK+ LKEM PN
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRV----------------GKMYKADAILKEMVENKVSPN 302
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL- 294
T+N+LI +C+ L +AL VF +M+ G+ VTY++L+ GLC+ G++++ +L
Sbjct: 303 SVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLD 362
Query: 295 ------------------------QLMEDSKE-----GSKG---RISPYNSVLYGLYREN 322
+L+E+++E G +G + +N++L+G +
Sbjct: 363 EMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFG 422
Query: 323 QQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ +EA K M EK F P A + I+GFC +G +E+ K ++M G + V Y+
Sbjct: 423 KMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYN 482
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI A+C+++ ++A+ L+ EM G P T+N +L+G C +GN+ AL L + M
Sbjct: 483 ILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNL-RKQMEK 541
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
GR + Y+ LI+ C KG + A+ LL +M+ KG++P+ T+
Sbjct: 542 EGRWA--NVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 167/318 (52%), Gaps = 31/318 (9%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+++T V+ LC VG++ A +++++ M+ G PNV TY
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDD-------------------MKVWGFWPNVVTY 268
Query: 240 NILISSYCE---TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
N LI YC+ G + A + +M + +S N VT++ LI G C + LK+ +
Sbjct: 269 NTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEE 328
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M+ +G K + YNS++ GL E + +EA L +M L P + + I G+C
Sbjct: 329 MQS--QGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKK 386
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+E+A+ FD + ++G PNV+ ++ L+H YC+ ++ EA L K M G+LP AST+
Sbjct: 387 KLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTY 446
Query: 415 NTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
N ++ G CR+G + L+ E RG+ ++ Y+ LI A CEK + A+ L+
Sbjct: 447 NCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVT----YNILISAWCEKKEPKKAARLID 502
Query: 474 QMVGKGILPDYLTWNSLL 491
+M+ KG+ P +LT+N LL
Sbjct: 503 EMLDKGLKPSHLTYNILL 520
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 138/276 (50%), Gaps = 38/276 (13%)
Query: 219 GGCRFL-KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
GG F+ KEM R+ PN+ T+N +I+ C+ G L+ A DV +DMK+ G N VTY+TL
Sbjct: 212 GGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTL 271
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G C GR+ K ++ KE + ++SP NSV + +
Sbjct: 272 IDGYCKMGRVGKMYKADAIL---KEMVENKVSP-NSVTFNVL------------------ 309
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
I GFC D N+ A + F++M +G P VV Y+ L++ C E ++ EA
Sbjct: 310 ----------IDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLI 456
L+ EM P T+N +++G C++ + A +L + IG+ G P ++ L+
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD----NIGKQGLTPNVITFNTLL 415
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
C+ G + A +L M+ KG LP+ T+N L++
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIV 451
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 217/445 (48%), Gaps = 37/445 (8%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V D+ TY ++K + R+ D +LL MK G+ PN V YN L++ CK G + A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ M++ P+ T++ILI C ++ L L++ S PDVVT +++
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM-ERKGCLPN 235
+G ++A +++E+ G + K + R +KE+ + G P+
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TY+ LI +Y + G L AL++ +M GI N +T +T++ LC ++D+ +L
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
K G Y +++ G +RE + ++ALE +M+K + P + I G C
Sbjct: 476 --SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G E A FD++ E G +P+ ++ +I YC+E RV +A E E H + P T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 414 FNTVLSGLCRQGNVGTALK----LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
N +L+GLC++G AL L+EE R + + Y+ +I A C+ + A
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEE--REVDTVT------YNTMISAFCKDKKLKEAY 645
Query: 470 MLLVQMVGKGILPDYLTWNSLLICL 494
LL +M KG+ PD T+NS + L
Sbjct: 646 DLLSEMEEKGLEPDRFTYNSFISLL 670
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 226/457 (49%), Gaps = 38/457 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+++ + + ++D+ + + + + P+ +N+++ K L AF
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG-SLKEAFQ 296
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M + V D TY IL+ GLC + +G +L+ MKS ++P+ V YNTLI
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL------VNALVLLEKSFSFG 177
+ G AR LM ME + N VT +I + CKEE V LV + G
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH-----G 411
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
F PD+VT +++ VG + A+E++ E G++G + K+
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
L ++G + + TY LI + ++ AL+++++MK I+ T+++LI GL
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C G+ + L + + E ++ G S +NS++ G +E + ++A E+ + K +
Sbjct: 532 CHHGKTE--LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 342 VDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ + IL G C +G E A F+ +IEE V + V Y+ +I A+C++++++EA +L+
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
EM G P T+N+ +S L G + +L+++
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 195/436 (44%), Gaps = 64/436 (14%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCK---NGKVGRARSLMSDMEEP----NDVTFSI 152
++ M +KPN + NTL+ L + + + AR + DM + N TF++
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 153 LICAYCKEENLVNALVLLEKSFS-FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
L+ YC E L +AL +LE+ S F PD VT +L+ + GR+ D E+L
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL------ 263
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+M++ G +PN TYN L+ YC+ G L A + MK + +
Sbjct: 264 -------------LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
TY+ LI GLC+ G + +GL+++ M+ K + + YN+++ G + EA + +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLK--LQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 332 KQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIE-EGGVPNVVIYDCLIHAYCQ 388
+QME +A V ++ + C + E R ++++ G P++V Y LI AY +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRG-----IG 442
+ A E+M+EM G T NT+L LC++ + A L+ RG +
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 443 RGSL--------------------------PGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
G+L P ++ LI LC G + A ++
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 477 GKGILPDYLTWNSLLI 492
G+LPD T+NS+++
Sbjct: 549 ESGLLPDDSTFNSIIL 564
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 18/287 (6%)
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILI---SSYCETGVLDSALDVFNDMKIDGISWNF 271
GK + ++M R PN+ T N L+ Y + + SA +VF+DM G+S N
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA 327
T++ L+ G C G+++D L +L+ M S+ +++P YN++L + ++ + +
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERM-----VSEFKVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E L M+K L P V + + G+C G++++A + + M + +P++ Y+ LI+
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILING 319
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C +RE ELM M P T+NT++ G G A KL+E+ M G +
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ-MENDGVKA 378
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVG-KGILPDYLTWNSLL 491
+ + S +K LC++ ++ + + ++V G PD +T+++L+
Sbjct: 379 NQVTHNIS--LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 158/358 (44%), Gaps = 27/358 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ F I + AY E AL + +K P+++T +L +G V
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL-----IGLVRYPSSF 183
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ +M + G NV T+N+L++ YC G L+ AL + M
Sbjct: 184 -----------SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS 232
Query: 265 D-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ ++ + VTY+T+++ + GR+ D LK L L++ K G YN+++YG +
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSD-LKEL-LLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
EA + ++ M++ + P ++ I G C G++ + D M P+VV Y+
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMR 439
LI + EA +LM++M G T N L LC++ + V+E DM
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G P Y LIKA + G A ++ +M KGI + +T N++L L ++
Sbjct: 411 GFS----PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 220/449 (48%), Gaps = 36/449 (8%)
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
ED D+A F++ G Q + YT A+L+ R + +LL PN ++
Sbjct: 54 EDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIM 113
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEEPN---DVTF-SILICAYCKEENLVNALVLLEKSF 174
Y T+I+ CK G+V +A L+ +M+E DV S LI C++ + AL KS
Sbjct: 114 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF-KSM 172
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK---- 230
P+V+T V+ LC R+ +A+E+ + +ME++
Sbjct: 173 GEECSPNVITYNTVVNGLCKANRIDEALELFD-------------------DMEKRYEAS 213
Query: 231 -GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
GC P+V +Y+ +I + C+ +D A + F M+ G + N VTY +LI GLC R +
Sbjct: 214 HGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSE 273
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
L++L M++ +G I +N++L+ L++ ++Q++A ++ +++ K P V ++
Sbjct: 274 CLELLLHMKE--KGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVA 331
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G C G V++A R +M+E P+V+ Y +I +C+ R+ +A ++ M H
Sbjct: 332 VHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHEC 391
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P TF T+L G A + V EDM + G +PG Y+ L+ +C +S
Sbjct: 392 IPHPVTFMTLLHGFSEHKKSREAFR-VHEDM--VNAGFIPGLQTYNVLMDCVCGADSVES 448
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
A + +M K PD T+ L+ CL +
Sbjct: 449 ALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 203/429 (47%), Gaps = 36/429 (8%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
++ Y ++ G C +V F+LL MK RGVK + ++++TLI LC+ G++ A
Sbjct: 110 NEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF 169
Query: 140 SDMEE---PNDVTFSILICAYCKEENLVNALVL---LEKSF--SFGFVPDVVTITKVLEL 191
M E PN +T++ ++ CK + AL L +EK + S G PDV++ + V++
Sbjct: 170 KSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDA 229
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC RV A E + K M GC PNV TY+ LI C+
Sbjct: 230 LCKAQRVDKAYE-------------------YFKRMRAVGCAPNVVTYSSLIDGLCKVDR 270
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGSKGRISP 310
L++ MK G N + ++ ++ L + D+ K Q E K G K +
Sbjct: 271 PSECLELLLHMKEKGFGINIIDFNAMLHAL---WKNDEQEKACQFFERLLKSGKKPNVVT 327
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN ++GL + + DEA L +M K+ P + S I GFC G ++ A F +M+
Sbjct: 328 YNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM 387
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+P+ V + L+H + + ++ REA + ++M G++P T+N ++ +C +V
Sbjct: 388 VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVE 447
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+AL++ + R + P Y+PLI+ LC A L M ++P+ +
Sbjct: 448 SALEIYHKMKR---KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICH 504
Query: 489 SLLICLSQQ 497
+L+ L +Q
Sbjct: 505 ALVEVLCKQ 513
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/517 (24%), Positives = 232/517 (44%), Gaps = 37/517 (7%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMT----PSLKIFNSILDVLVK-E 59
+ P+ + TV+ GL +A I++ ++ D+ R+ + P + +++++D L K +
Sbjct: 175 ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQ 234
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A ++ K+M A G + TY+ L+ GLC +R + +LL MK +G N + +
Sbjct: 235 RVDKAYEYF-KRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDF 293
Query: 120 NTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N ++H+L KN + +A L+ ++PN VT+++ + CK + A +L +
Sbjct: 294 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVE 353
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKG 219
PDV+T + +++ C GR+ A ++ K +
Sbjct: 354 SKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSRE 413
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
R ++M G +P + TYN+L+ C ++SAL++++ MK + TY LI+
Sbjct: 414 AFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQ 473
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
LC R+D+ + L +ME G I ++++ L ++ + DEA L + ++
Sbjct: 474 CLCRARRVDEAKEFLDVMEADNVVPNGAIC--HALVEVLCKQGEVDEACSVLDNVVEVGC 531
Query: 340 RAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
+ + + KIL + E A + G V + Y + C+ + EA E
Sbjct: 532 QPLGETFKILVEELYLRKKWEAASKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVE 588
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
++++M G P T+ VL LC V +A+ E + RG PG Y+ LI
Sbjct: 589 VIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFE---KMASRGCAPGLVTYTLLIG 645
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
C A + MV G P T +L CL
Sbjct: 646 EACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCL 682
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/523 (23%), Positives = 223/523 (42%), Gaps = 62/523 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E ++ TVI G +A ++ + D + + + + ++++ L ++ + A
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKG-RIDEALE 167
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-----GVKPNSVIYNTLI 123
+ K M + TY ++ GLC NR+ + +L M+ R G +P+ + Y+T+I
Sbjct: 168 QFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVI 227
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+LCK +V +A M PN VT+S LI CK + L LL GF
Sbjct: 228 DALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFG 287
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+++ +L L ++ EQ + C+F + + + G PNV TY
Sbjct: 288 INIIDFNAML-------------HALWKNDEQEK------ACQFFERLLKSGKKPNVVTY 328
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N+ + C+ G +D A + +M ++ + +TY ++I G C GR+D + M
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMM- 387
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG--NV 357
E ++ + ++L+G + EA + M ++ +L CV G +V
Sbjct: 388 VHECIPHPVT-FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 446
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A + +M + P+ Y LI C+ RV EA E + M +P + + +
Sbjct: 447 ESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 506
Query: 418 LSGLCRQGNVGTAL----KLVEEDMRGIGR-------------------------GSLPG 448
+ LC+QG V A +VE + +G G +
Sbjct: 507 VEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVAD 566
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ YS + +C+ G A ++ QMV KG+ PD T+ ++L
Sbjct: 567 AATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVL 609
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E+A R + +E PN ++Y +I+ +C+ +V +A EL+ EM G +T+
Sbjct: 93 EEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTL 152
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM-- 475
+ GLCR+G + AL E + +G P Y+ ++ LC+ A L M
Sbjct: 153 IQGLCRKGRIDEAL----EQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEK 208
Query: 476 ---VGKGILPDYLTWNSLL--ICLSQQ 497
G PD +++++++ +C +Q+
Sbjct: 209 RYEASHGCEPDVISYSTVIDALCKAQR 235
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 236/522 (45%), Gaps = 44/522 (8%)
Query: 35 DLVSRFNM-------TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL 87
D VS FN TP + FN IL LVK + + ++M G+Q + +T+ IL
Sbjct: 35 DAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNIL 94
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP-- 145
+ ++ F ++ + G +P++V NTL+ LC NGKV A + +
Sbjct: 95 INCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRF 154
Query: 146 --NDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAV 202
+ V++ LI CK AL LL K V PDV+ T +++ C V+DA
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAY 214
Query: 203 EILEESGEQGR----------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ E + +G++K L EM PNV T+NILI
Sbjct: 215 DLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGL 274
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + A V + M G+ N VTY +L+ G ++ + + S G
Sbjct: 275 CKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI--SLRGVTP 332
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ Y+ ++ GL + DEA++ K+M + + P V S I G C G + D
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D++ G N++ Y+ L++ C+ +V +A L+ +M G P ST+ T++ GLC+
Sbjct: 393 DEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKN 452
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A ++ ++ + +G Y+ +I LC++G F A LL QM G +PD
Sbjct: 453 GRLKDAQRIYQD---LLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDA 509
Query: 485 LTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
+T+ +L+ L + N+ V ++ E+ A+E C
Sbjct: 510 VTYETLISALFKN---------NKNGKAVKLLREMIARESDC 542
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 30/333 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F ++I G + + V + +S N+ P++ FN ++D L KE
Sbjct: 227 PNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSV 286
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ GV+ + TY LM G L V + + + RGV PN Y+ +I+ LCK
Sbjct: 287 LSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCK 346
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N V A L +M PN VT+S LI CK + + L+++ + G +++T
Sbjct: 347 NKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIIT 406
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+L LC +V A+ +L + ++G + G++K R +++
Sbjct: 407 YNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLL 466
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG N+ Y ++I+ C+ G D AL + + M+ +G + VTY+TLI L +
Sbjct: 467 CKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNG 526
Query: 289 DGLKILQLM----------EDSKEGSKGRISPY 311
+K+L+ M E S+E S Y
Sbjct: 527 KAVKLLREMIARESDCSGKEQSREKKDKDTSSY 559
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 217/456 (47%), Gaps = 29/456 (6%)
Query: 44 PSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS F +++ L V+ I A + KM G Q D TY L+ GLC +
Sbjct: 122 PSTATFTTLIRGLCVEGKIGEALQLF-DKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR 180
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
L M+ R +P V+Y+T+I SLCK+ ++ A SL SDM PN+ T+S LI C
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 240
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA---VEILEESGEQGRL- 214
+ A+ L +PD +T +++ LC G V+ A V+++ +S + +
Sbjct: 241 ILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVV 300
Query: 215 ---GKVKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ G C M RKGC+P+V +Y LI+ YC+ ++D A+ +F +M
Sbjct: 301 TYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEM 360
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G+ + VTY+TLI GLC GR+ D + + E G + Y + L + +
Sbjct: 361 SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH--EMVVYGQIPDLVTYRILFDYLCKNH 418
Query: 323 QQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ EA+ LK +E L P S+ + G C G +E A+ F ++ +G P+V Y
Sbjct: 419 RLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYT 478
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+I+ CQ+ + EAS+L EM +G P A T+N + G R A++L +E
Sbjct: 479 IMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQE---M 535
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ RG + L++ L + G QS +L + V
Sbjct: 536 LSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFV 571
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 218/494 (44%), Gaps = 38/494 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
++ PP F ++ + R + + V+ + F + + L++L+ L
Sbjct: 48 MRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHN----TYTLNILINSFCHLN 103
Query: 65 RAFYRKKMMAS----GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + ++ G Q T+ L++GLC+ ++G+ +L M G +P+ + Y
Sbjct: 104 RLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYG 163
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A + ME+ P V +S +I + CK+ L AL L +
Sbjct: 164 TLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAK 223
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P+ T + ++ LC +G +A+ R M + +P+
Sbjct: 224 GISPNNFTYSSLIHGLCILGHWKEAI-------------------RLFYAMIHRKIMPDQ 264
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
T+N L+ + C+ G++ A V + M + + VTY++L+ G C + + +
Sbjct: 265 LTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDT 324
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M ++G + Y +++ G + D+A+ ++M + L P V + I G C
Sbjct: 325 M--VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G + DA F +M+ G +P++V Y L C+ R+ EA L+K + G P +
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+ V+ G+CR G + A L + +G P Y+ +I LC++G AS L +
Sbjct: 443 SIVMDGMCRAGELEAARDLFS---KLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499
Query: 475 MVGKGILPDYLTWN 488
M G P+ T+N
Sbjct: 500 MDENGCSPNACTYN 513
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 152/330 (46%), Gaps = 25/330 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I GL + ++ + + P FN+++D L KE + + +
Sbjct: 227 PNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYV 286
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ S ++ D TY LM G CL + +G + M +G P+ + Y TLI+ CK
Sbjct: 287 VDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCK 346
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +A L +M + P+ VT++ LI C L +A+ L + +G +PD+VT
Sbjct: 347 IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ + LC R+ +A+ + LK +E P++ Y+I++
Sbjct: 407 YRILFDYLCKNHRLAEAMVL-------------------LKVIEGTNLDPDIHIYSIVMD 447
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C G L++A D+F+ + G+ + TY +I GLC G + + K+ M+++ G
Sbjct: 448 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN--GC 505
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM 334
YN + G R N+ A++ ++M
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEM 535
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
IDD L + M + I ++ +L + R L KQM+ +L
Sbjct: 35 IDDALSLFNRMLRMRPPPS--IVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTL 92
Query: 347 KIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
IL FC + A +++ G P+ + LI C E ++ EA +L +MTG
Sbjct: 93 NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G+ P T+ T+++GLC+ GN TA++ + + R P YS +I +LC+
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQ---RNCRPTVVVYSTIIDSLCKDRQ 209
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A L M+ KGI P+ T++SL+
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLI 236
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 223/480 (46%), Gaps = 52/480 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-----IDL 63
P + ++RG A + D + + + + + + +N +L L E+ ++
Sbjct: 100 PTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQ 159
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A F+ K+M ASGV+ D +Y IL+ L + R+ + L M P+ + YN L+
Sbjct: 160 AMEFF-KEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLM 215
Query: 124 HSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
CK G+ A+SLM ++ EPN T+SI+I YCK + + A + K V
Sbjct: 216 DGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV 275
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+ VT ++ C G + DA+ + EME+ GC + TY
Sbjct: 276 PNAVTFNTLIAGFCKAGMLEDAI-------------------KLFAEMEKIGCKATIVTY 316
Query: 240 NILISSYCET-GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
N LI S C+ G + +A+D+FN ++ G++ VTY++LI+G C R+ + ++ ME
Sbjct: 317 NTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME 376
Query: 299 DSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
G+ +P Y+ ++ GL + + EA + L+ M+ P V I GFC
Sbjct: 377 -------GKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFC 429
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++ A F++M G PN VI++ LI C+ ER + L+ M G P
Sbjct: 430 KCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVI 489
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+N ++SGLC V A +L + G P ++ LI+ LC + + A +L
Sbjct: 490 TYNCLISGLCSANRVEDAQRLFD------GMACAPNVTTFNFLIRGLCAQKKVEEARNIL 543
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 227/495 (45%), Gaps = 41/495 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + +IRG + ++ V + + P+ N++L L + + A
Sbjct: 30 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 89
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ M A ++ IL++G + RV D L M+ + YN ++ LC
Sbjct: 90 FRE-MQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLC 148
Query: 128 KNGKVG----RARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
K +A +M+ EP+ ++ IL+ A + A L +
Sbjct: 149 WENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFS---AMTCS 205
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD++T +++ C +G+ +A ++ KE+ + G PNV TY
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLM-------------------KEILKAGYEPNVFTY 246
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+I+I+ YC+ ++ A +VF M N VT++TLI G C G ++D +K+ ME
Sbjct: 247 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEME- 305
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQ-DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
K G K I YN+++ L ++ A++ ++E L P V + I GFC
Sbjct: 306 -KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ +A + FD+M E PNV+ Y LI C+ R++EA++ +++M HGY P T+
Sbjct: 365 LSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG 423
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++G C+ G + +AL L E M+ G P + ++ LI LC+ LL M
Sbjct: 424 LINGFCKCGELKSAL-LFFEKMKLAG--CAPNTVIFNTLIDGLCKAERANDGLRLLCHMH 480
Query: 477 GKGILPDYLTWNSLL 491
+G PD +T+N L+
Sbjct: 481 AEGCKPDVITYNCLI 495
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 168/366 (45%), Gaps = 63/366 (17%)
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
AL L ++ + F P+ T ++ C G++ AV + +
Sbjct: 15 QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSD----------------- 57
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M+ G LPN T N L+ CE G + SAL +F +M+ +++ L+RG
Sbjct: 58 --MKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMA 115
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ----DEALEYLKQMEK---- 336
GR+ D L LQ M K S YN VL GL EN+ ++A+E+ K+M+
Sbjct: 116 GRVRDALAHLQDMR--KSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE 173
Query: 337 ------------------------LF------PRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
LF P + ++ + G+C G +A+ +
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKE 233
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
+++ G PNV Y +I+ YC+ ++V EA E+ +M +P A TFNT+++G C+ G
Sbjct: 234 ILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGM 293
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK-GGFQSASMLLVQMVGKGILPDYL 485
+ A+KL E M IG + + Y+ LI +LC+K GG +A L ++ G G+ P +
Sbjct: 294 LEDAIKLFAE-MEKIGCKATIVT--YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 350
Query: 486 TWNSLL 491
T+NSL+
Sbjct: 351 TYNSLI 356
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
+ P+ + +I GL + R + + K + + TP++ + +++ K +
Sbjct: 378 KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSA 437
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +KM +G + + L+ GLC R DG +LL M + G KP+ + YN LI
Sbjct: 438 LLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISG 497
Query: 126 LCKNGKVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLE 171
LC +V A+ L M PN TF+ LI C ++ + A +L+
Sbjct: 498 LCSANRVEDAQRLFDGMACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +LSGL AL+L +E + G+ P + Y+ LI+ C+ G A +
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGL---FAPNAHTYNVLIRGFCKGGQMHQAVSVFSD 57
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M G+LP+ T N+LL+ L +
Sbjct: 58 MKSSGLLPNASTMNTLLLGLCE 79
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 203/424 (47%), Gaps = 36/424 (8%)
Query: 96 RVGD---GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
R GD L+ M S+G+KP V YN+++ L +NG+ +AR + M+ P+
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+F++LI +C+ L AL ++ PDVV+ + ++ L G + A E L E
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E G R G + R EM GCLP+V TYN L++ C+ L
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRL 385
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A ++ N+MK G+ + T+ TLI G C G I+ L+ + D + + I YN
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR--LRPDIVTYN 443
Query: 313 SVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++ G+ R+ +A E M ++FP V S+ I C G V++A D+M+ +
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G VPN++ Y+ +I YC+ V + + + +M +P T+NT++ G ++G + A
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEA 563
Query: 431 ---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
LK++E + P + Y+ +I G Q A + +M +GI PD T+
Sbjct: 564 FNLLKIMENE------NVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTY 617
Query: 488 NSLL 491
S++
Sbjct: 618 MSMI 621
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 227/482 (47%), Gaps = 32/482 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD ++ RA + + D + + P L +NS+L L++ D AR
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R M A GV D ++ +L+ G C + + + M+ R V P+ V ++ LI
Sbjct: 252 FRA-MDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFT 310
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ A + +M E P+ V ++++I +C+ ++ AL + ++ +FG +PDVV
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVV 370
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L LC R+ DA E+L EM+ +G P++ T+ LI
Sbjct: 371 TYNTLLNGLCKERRLSDAEELL-------------------NEMKERGVPPDLCTFTTLI 411
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G ++ AL F+ + + + VTY+TLI G+C G + ++ M S+E
Sbjct: 412 HGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMH-SREI 470
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
++ Y+ ++ + Q D A +L +M + + P + + I G+C GNV +
Sbjct: 471 FPNHVT-YSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQ 529
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +M + +P+++ Y+ LIH Y +E ++ EA L+K M P A T+N ++SG
Sbjct: 530 QFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
GN+ A V + M RG P Y +I G + + L +M+ KG+
Sbjct: 590 SVHGNMQEA-DWVYKKMGA--RGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLA 646
Query: 482 PD 483
PD
Sbjct: 647 PD 648
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 185/394 (46%), Gaps = 63/394 (15%)
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
R ++S E N T +I++ +YCK + FG +V T+ +E C
Sbjct: 148 RLVLSSNSEVNTYTLNIMVHSYCK-------------TLQFG---EVDTVISEMEKRCVF 191
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
V+ +++ + R G V+ + M KG P + TYN ++ G D A
Sbjct: 192 PDVVTHNVMVDA---RFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKA 248
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP---YN 312
+VF M G++ + +++ LI G C G +++ L+ KE R++P
Sbjct: 249 REVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFY------KEMRGRRVTPDVVSF 302
Query: 313 SVLYGLY-RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
S L GL+ R + D A EYL++M + L P V ++ I GFC G + +A R D+M+
Sbjct: 303 SCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA 362
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G +P+VV Y+ L++ C+E R+ +A EL+ EM G P TF T++ G CR GN+
Sbjct: 363 FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEK 422
Query: 430 ALKLVE--EDMR-------------------GIGRGS-----------LPGSGHYSPLIK 457
AL+ + D R +G+ + P YS LI
Sbjct: 423 ALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ CEKG +A L +MV KGI+P+ +T+NS++
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 215/473 (45%), Gaps = 36/473 (7%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ +N++L K+ A M + GV D TY +L+ LC +NR+ G+
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
LL M+ R + PN V YNTLI+ GKV A L+++M PN VTF+ LI +
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
E N AL + + G P V+ +L+ LC + +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC----------------KNAEFDLAR 388
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
G F M+R G TY +I C+ G LD A+ + N+M DGI + VTY LI
Sbjct: 389 G---FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G C GR +I+ + G I Y++++Y R EA+ + M E
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
++ + C G V +A+ M +G +PN V +DCLI+ Y +A
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH---YS 453
+ EMT G+ P T+ ++L GLC+ G++ A K ++ ++P + Y+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS------LHAVPAAVDTVMYN 617
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
L+ A+C+ G A L +MV + ILPD T+ SL+ L ++ ++ +L
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 225/512 (43%), Gaps = 38/512 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR---FNMTPSLKIFNSILDVLVKED--IDL 63
P+E + T+I G V+ A+ L++ F ++P+ FN+++D + E +
Sbjct: 296 PNEVTYNTLINGFSNE---GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 352
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ FY M A G+ + +Y +L+ GLC MK GV + Y +I
Sbjct: 353 LKMFYM--MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCKNG + A L+++M +P+ VT+S LI +CK A ++ + + G
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+ + + ++ C +G + +A+ I E +G + GKV F
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++ M G LPN +++ LI+ Y +G A VF++M G F TY +L++GLC
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GG + + K L+ + + YN++L + + +A+ +M + P +
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVM--YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMK 400
+ I G C G A + G V PN V+Y C + + + + +
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G+ P T N ++ G R G + L+ E G G P Y+ L+
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE--MGNQNGG-PNLTTYNILLHGYS 765
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
++ ++ +L ++ GILPD LT +SL++
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 797
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 26/348 (7%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N + ILI Y +E + ++L + +GF P V T +L G V+
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL------GSVV------ 169
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+SGE + FLKEM ++ P+V T+NILI+ C G + + + M+
Sbjct: 170 -KSGEDVSVWS------FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 222
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + VTY+T++ C GR +++L M+ +G + YN +++ L R N+
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIA 280
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ L+ M K + P V + I GF +G V A + ++M+ G PN V ++ LI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ E +EA ++ M G P ++ +L GLC+ A MR
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY---MRMKRN 397
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G G Y+ +I LC+ G A +LL +M GI PD +T+++L+
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 213/483 (44%), Gaps = 71/483 (14%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G +TY L+KGLC + + K L + + ++V+YNTL+ ++CK+G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTI 185
+ +A SL +M + P+ T++ LI C++ V A++ +++ + G V P+ V
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
T ++ + G+ + E+ G R+GK++ L EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ PN+ TYNIL+ Y + + ++ ++ + ++GI + +T +L+ G+C ++
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 290 GLKILQL--------------MEDSKEGSKGRIS-------------------PYNSVLY 316
GLKIL+ M SK + G I+ ++++
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L R ++ E+ L +M K + P + I G C G+++ A ++MI P
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
V ++ A + + EA+ L++ M +P ++F T++ C+ GNV AL+L
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL- 986
Query: 435 EEDMRGIGRGSLPGSG------HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
R + G Y+ LI LC KG A L +M G G L + T+
Sbjct: 987 --------RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038
Query: 489 SLL 491
+L+
Sbjct: 1039 ALI 1041
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 225/552 (40%), Gaps = 85/552 (15%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTP-----SLKIFNSILDVLVKED 60
PD + +I G GR + ++V + R ++P S I+N +KE
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCR---IYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV--- 117
I + A M+ G D +T+ +L+ LC +V + + + M S G+ PN+V
Sbjct: 493 IRIYEA-----MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 118 --------------------------------IYNTLIHSLCKNGKVGRA----RSLMSD 141
Y +L+ LCK G + A +SL +
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607
Query: 142 MEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+ V ++ L+ A CK NL A+ L + +PD T T ++ LC G+ + A
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 667
Query: 202 VEILEESGEQG-----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +E+ +G + G+ K G F ++M+ G P++ T N +I
Sbjct: 668 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 727
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y G ++ D+ +M N TY+ L+ G R D L G
Sbjct: 728 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK--RKDVSTSFLLYRSIILNGI 785
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDR---SLKILGFCVDGNVED 359
+S++ G+ N + L+ LK R VDR ++ I C +G +
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKA---FICRGVEVDRYTFNMLISKCCANGEINW 842
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M G + D ++ + R +E+ ++ EM+ G P + + +++
Sbjct: 843 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLCR G++ TA +V+E+M I P + S +++AL + G A++LL M+
Sbjct: 903 GLCRVGDIKTAF-VVKEEM--IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 959
Query: 480 ILPDYLTWNSLL 491
++P ++ +L+
Sbjct: 960 LVPTIASFTTLM 971
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 142/484 (29%), Positives = 218/484 (45%), Gaps = 36/484 (7%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQG-----DDYTYAILMKGLCLTNRV 97
TP + +N++L E A MMA QG + +YAI++ G +V
Sbjct: 162 TPDVVSYNTLLKGFCNEK-RAEEALELLHMMADS-QGRSCPPNVVSYAIVINGFFTEGQV 219
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSIL 153
+ L M RG++PN V Y T+I LCK V RA + M +P++ T++ L
Sbjct: 220 DKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCL 279
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
I Y + +LE+ + G PD T +L LC+ GR +A + + +G
Sbjct: 280 IHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGI 339
Query: 214 LGKV------------KGGCR----FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
V KG L M G P+ +NI+ ++Y + ++D A+
Sbjct: 340 KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSKEGSKGRISPYNSVLY 316
+FN MK G+S + V Y LI LC GR+DD LK Q+M EG I +NS++Y
Sbjct: 400 IFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM---NEGVAPNIFVFNSLVY 456
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL ++ ++A E+ +M + + P V + + C G V A+R D M G P
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
V+ Y LI +C R+ EA++ + M G P T+NT+L G CR G + A +
Sbjct: 517 GVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVF 576
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
E +R G PG YS ++ L F A L + M+ G + +N +L L
Sbjct: 577 REMLRN---GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGL 633
Query: 495 SQQT 498
S+
Sbjct: 634 SKNN 637
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 203/446 (45%), Gaps = 31/446 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL-HVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ SG + ++ L+KGLC R+ + +L M G P+ V YNTL+ C
Sbjct: 120 ILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEK 179
Query: 131 KVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L+ M + PN V+++I+I + E + A L + G P+VV
Sbjct: 180 RAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T V++ LC V A + ++ ++G +GK K R L+EM
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P+ TY L++ C G A +F+ M GI N Y LI G + G +
Sbjct: 300 SAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGAL 359
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ +L LM ++ I +N + ++ DEA+ +M++ L P V+
Sbjct: 360 SEMHDLLNLMVENGLSPDHHI--FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYG 417
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I C G V+DA F+QM+ EG PN+ +++ L++ C ++ +A E EM
Sbjct: 418 ALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ 477
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P FNT+L LC +G V A +L++ R G+ PG Y+ LI C G
Sbjct: 478 GIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER---VGTRPGVISYTTLIGGHCLVGRI 534
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A+ L M+ G+ PD T+N+LL
Sbjct: 535 DEAAKSLDVMLSVGLKPDEWTYNTLL 560
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 222/495 (44%), Gaps = 36/495 (7%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVK 58
M IQ P+ + TVI GL +A++++ + + P +N ++ + +
Sbjct: 230 MDRGIQ--PNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIG 287
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+ ++ R ++M A G++ D YTY L+ LC R + L M +G+KPN I
Sbjct: 288 KWKEVVRML--EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAI 345
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
Y LIH G + L++ M E P+ F+I+ AY K+ + A+ + K
Sbjct: 346 YGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMK 405
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G PDVV +++ LC +GRV DAV +F +M +G P
Sbjct: 406 QQGLSPDVVNYGALIDALCKLGRVDDAV------------------LKF-NQMMNEGVAP 446
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N+ +N L+ C + A + + +M GI + V ++T++ LC+ G++ +++
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
LME + G++ + Y +++ G + DEA + L M L P + + G+C
Sbjct: 507 DLME--RVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++DA F +M+ G P VV Y ++H R EA EL M G
Sbjct: 565 RAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIW 624
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+N +L+GL + V A KL + + + ++ +I AL + G + A L
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT---FNIMIGALFKSGRNEDAMHLF 681
Query: 473 VQMVGKGILPDYLTW 487
+ G++PD T+
Sbjct: 682 ATISSYGLVPDVFTY 696
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 187/427 (43%), Gaps = 55/427 (12%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V D TY+IL+ C R+ GF ++ G + N+++ N L+ LC A+
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD------AK 143
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
L M+ +L+++ G PDVV+ +L+ C+
Sbjct: 144 RLCEAMD------------------------ILVKRMPELGCTPDVVSYNTLLKGFCNEK 179
Query: 197 RVMDAVEILEESGE-QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
R +A+E+L + QGR C PNV +Y I+I+ + G +D A
Sbjct: 180 RAEEALELLHMMADSQGR-----------------SCPPNVVSYAIVINGFFTEGQVDKA 222
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
++F +M GI N VTY T+I GLC +D + Q M D +G K YN ++
Sbjct: 223 YNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID--KGVKPDNDTYNCLI 280
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+G + E + L++M L P + C +G +A+ FD MI +G
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIK 340
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PNV IY LIH Y + + E +L+ M +G P FN + + ++ + A+ +
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ + +G P +Y LI ALC+ G A + QM+ +G+ P+ +NSL+
Sbjct: 401 FNKMKQ---QGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYG 457
Query: 494 LSQQTTW 500
L W
Sbjct: 458 LCTVDKW 464
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 191/434 (44%), Gaps = 39/434 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ +I+ +I G ++++ +L+ ++P IFN I K+ ID A
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D Y L+ LC RV D + M + GV PN ++N+L++ LC
Sbjct: 401 F-NKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A+ +M P+ V F+ ++C C + ++ A L++ G P V+
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI 519
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ T ++ C VGR+ +A + L+ M G P+ TYN L+
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDV-------------------MLSVGLKPDEWTYNTLL 560
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G +D A VF +M +GI+ VTY T++ GL + R + ++ M S G
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS--G 618
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV-------DGN 356
+ I YN +L GL + N DEA + + + + D L+I F + G
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSL-----CSKDFQLEITTFNIMIGALFKSGR 673
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
EDA F + G VP+V Y + +E + E +L M G P + N
Sbjct: 674 NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733
Query: 417 VLSGLCRQGNVGTA 430
++ L +G++ A
Sbjct: 734 LVRRLLHRGDITRA 747
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 95/253 (37%), Gaps = 52/253 (20%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDID 62
S+ PDE + T++ G RA I+D + R +TP + +++IL +
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A+ Y M+ SG Q + + Y I++ GL N V + FKL + S+ + +N +
Sbjct: 606 EAKELYL-NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
I +L K+G+ A L + + S+G VPDV
Sbjct: 665 IGALFKSGRNEDAMHLFATIS-------------------------------SYGLVPDV 693
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T + E L G LEE + ME+ G PN N L
Sbjct: 694 FTYCLIAENLIEEG-------YLEEFDD------------LFSAMEKSGTTPNSRMLNAL 734
Query: 243 ISSYCETGVLDSA 255
+ G + A
Sbjct: 735 VRRLLHRGDITRA 747
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 4/164 (2%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
I+ ++ GL + +++ K + + + FN ++ L K + +
Sbjct: 625 IYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATI 684
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G+ D +TY ++ + L + + L M+ G PNS + N L+ L G +
Sbjct: 685 SSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDI 744
Query: 133 GRARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEK 172
RA + + ++E N T ++LI ++E +A L EK
Sbjct: 745 TRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEK 788
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 221/484 (45%), Gaps = 49/484 (10%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N+ P + FN+++D L KE A MM + ++ D TY L+ G N+V +
Sbjct: 268 NINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNA 327
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+ + M GV PN Y T+I LCK V A SL +M+ P+ VT++ LI
Sbjct: 328 KYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
CK +L A+ L +K G PDV + T +L+ LC GR+ +A E
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKE------------- 434
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
F + + KG NV TYN++I+ C+ + A+D+ + M+ G + +T+ T
Sbjct: 435 ------FFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKT 488
Query: 277 LIRGLCSGGRIDDGLKILQLM--EDSKEGSKGR---------------ISP----YNSVL 315
+I L D KIL+ M +E K R I P Y +++
Sbjct: 489 IICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLM 548
Query: 316 YGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G + N+ A M ++ P ++ I G C V++A F++M +
Sbjct: 549 DGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMF 608
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN+V Y LI A C+ + A L+KEM HG P ++ +L GLC+ G + A ++
Sbjct: 609 PNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEI 668
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ R + +G Y+ +I LC+ G F A L +M KG +PD +T++ ++
Sbjct: 669 FQ---RLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWA 725
Query: 494 LSQQ 497
L ++
Sbjct: 726 LFEK 729
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 204/431 (47%), Gaps = 42/431 (9%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++ +++A G Q + +Y L+ GLC T +LL ++ VKP+ V+YNT+IHSL
Sbjct: 154 YFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSL 213
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKN +G A L S+M PN VT++ L+ +C +L A LL + PDV
Sbjct: 214 CKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDV 273
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
C+ ++DA+ G+ GK+K L M + P+V TYN L
Sbjct: 274 ----------CTFNTLIDAL---------GKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I Y + +A VF M G++ N TY T+I GLC +D+ + + + M+ +
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMK--YK 372
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
I Y S++ GL + + + A+ K+M++ + P ++ + C G +E+A
Sbjct: 373 NMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENA 432
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K F +++ +G NV Y+ +I+ C+ + EA +L +M G G +P A TF T++
Sbjct: 433 KEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICA 492
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
L + A K++ E I RG K + A ++L M I
Sbjct: 493 LFEKDENDKAEKILRE---MIARGLQEA------------RKVRLKEAKIVLAVMTKACI 537
Query: 481 LPDYLTWNSLL 491
PD +T+ +L+
Sbjct: 538 KPDVVTYGTLM 548
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 199/460 (43%), Gaps = 30/460 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P FN IL LV KK ++G D T ILM C + F +
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCK 159
L + RG PN++ NTLI LC G++ +A +++ + N V++ LI CK
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
LL K PDVV ++ LC + DA
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDA------------------ 222
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
C EM KG PNV TYN L+ +C G L A + N+MK+ I+ + T++TLI
Sbjct: 223 -CDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
L G++ +L +M K K + YNS++ G + N+ A M + +
Sbjct: 282 ALGKEGKMKAAKIVLAVM--MKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGV 339
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + I G C + V++A F++M + +P++V Y LI C+ + A
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L K+M G P ++ +L LC+ G + A + + R + +G Y+ +I
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQ---RLLVKGYHLNVQTYNVMIN 456
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LC+ F A L +M GKG +PD +T+ +++ L ++
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEK 496
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 227/528 (42%), Gaps = 50/528 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ T+I+GL I + D V + + ++++ L K A A
Sbjct: 131 PNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARL 190
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K+ V+ D Y ++ LC +GD L M +G+ PN V YN L++ C
Sbjct: 191 LRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCI 250
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A SL+++M+ P+ TF+ LI A KE + A ++L PDVVT
Sbjct: 251 MGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVT 310
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR---------FLKEME 228
+++ + +V +A + + G V+ G C+ +EM+
Sbjct: 311 YNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMK 370
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K +P++ TY LI C+ L+ A+ + MK GI + +Y L+ LC GGR++
Sbjct: 371 YKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAV---- 342
+ + Q + +G + YN ++ GL + + EA++ +ME P A+
Sbjct: 431 NAKEFFQRL--LVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKT 488
Query: 343 -----------DRSLKILGFCVDGNVEDAKR--------CFDQMIEEGGVPNVVIYDCLI 383
D++ KIL + +++A++ M + P+VV Y L+
Sbjct: 489 IICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLM 548
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
Y ++ A + M G P + ++ GLC++ V A+ L EE M+ +
Sbjct: 549 DGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEE-MK--HK 605
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ LI ALC+ + A LL +M GI PD ++ LL
Sbjct: 606 NMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILL 653
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 105/230 (45%), Gaps = 23/230 (10%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M + ++ D TY LM G L N + + + M GV PN Y +I LCK
Sbjct: 532 MTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKT 591
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V A SL +M+ PN VT++ LI A CK +L A+ LL++ G PDV + T
Sbjct: 592 VDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTI 651
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L+ LC GR+ A EI + R L KG NV Y +I+ C
Sbjct: 652 LLDGLCKSGRLEGAKEIFQ---------------RLL----VKGYHLNVQVYTAMINELC 692
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+ G+ D ALD+ M+ G + VT+D +I L D KIL M
Sbjct: 693 KAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEM 742
>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
Length = 649
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 33/434 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK----VGRARSL 138
TY L+ G C + R+ D +L+ M V P++ YNT++ LC K +
Sbjct: 160 TYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEM 216
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ + PN+VTF+ I ++C+ L A+ LL++ +G PDVV + ++ G V
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276
Query: 199 MDAVEILE----ESGEQGRLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISS 245
A+++L + +KG C + EM RKGC PN T+++LISS
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ ++DSA++V M+ G + V Y+ +I L GR+DD L++L M K +
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV-CKPDAL 395
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
G +N+VL G R + +A E + QM + ++ + IL C +G V A +
Sbjct: 396 G----FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQV 451
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F+QM P++V Y L++ + ++ V A +L + M P ++N VL GLCR
Sbjct: 452 FEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCR 508
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
A +L+ E +G+ P ++ LI +LC+KG A +L QM G PD
Sbjct: 509 AARWEDAGELIAE---MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565
Query: 484 YLTWNSLLICLSQQ 497
T+N+L+ S+Q
Sbjct: 566 IFTYNALINGFSEQ 579
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 212/443 (47%), Gaps = 43/443 (9%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLA 64
+ PP+E F T IR + +++ V+ D + R+ TP + I++++++ ++ +D A
Sbjct: 220 RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQA 279
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + + Y +KGLC+ R D +L+ M +G PN ++ LI
Sbjct: 280 LDLLNTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLIS 335
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLC+N V A ++ ME EP+ V ++I+I + + + +AL LL S P
Sbjct: 336 SLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLN---SMVCKP 392
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD-TY 239
D + VL+ C R DA E+ + +M R C P ++ T+
Sbjct: 393 DALGFNAVLKGFCRAERWHDASEL-------------------IAQMFRDDC-PLIEMTF 432
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
NILI + C+ G+++ A VF M + + VTY +L+ G G ++ +++ + M
Sbjct: 433 NILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP- 491
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
K I YN+VL GL R + ++A E + +M + P V ++ I C G V
Sbjct: 492 ----CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLV 547
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A +QM G P++ Y+ LI+ + ++ R+ +A +L+ M+ P A ++N+
Sbjct: 548 DRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNST 604
Query: 418 LSGLCRQGNVGTALKLVEEDMRG 440
L GLCR A +LV E +R
Sbjct: 605 LKGLCRAERWQDAEELVAEMLRN 627
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 213/463 (46%), Gaps = 64/463 (13%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
IL+K LC T R+ D ++L +K+ ++V +NTL+ C++G++ A ++
Sbjct: 95 ILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARAT 153
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM--- 199
N VT++ LI YC+ L +AL L+ S PD T VL+ LC +
Sbjct: 154 GAANVVTYTALIDGYCRSGRLDDALRLIA---SMPVAPDTYTYNTVLKGLCIAKKWEEAE 210
Query: 200 -------------DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+ V + + G + + L +M R GC P+V Y+ LI+ +
Sbjct: 211 ELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGF 270
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-EDSKEGSK 305
E G +D ALD+ N M N V Y+ ++GLC R +D I +LM E ++G
Sbjct: 271 SEQGHVDQALDLLNTMLCKP---NTVCYNAALKGLCIAERWED---IGELMAEMVRKGCS 324
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRC 363
+ ++ ++ L + N D A+E L+QMEK P V+ ++ I G V+DA R
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ M+ + P+ + ++ ++ +C+ ER +ASEL+ +M I TFN ++ LC+
Sbjct: 385 LNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQ 441
Query: 424 QGNVGTALKLVEEDMR---------------GIGRGSL--------------PGSGHYSP 454
G V A ++ E+ R G L P Y+
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNA 501
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++K LC ++ A L+ +MVGK P+ +T+N L+ L Q+
Sbjct: 502 VLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQK 544
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 137/279 (49%), Gaps = 21/279 (7%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
++N L++ YC G L A V + G + N VTY LI G C GR+DD L+++ M
Sbjct: 126 SHNTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASM 184
Query: 298 EDSKEGSKGRISPYNSVLYGL--YRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG 355
+ + YN+VL GL ++ ++ E L + P V + +I FC +G
Sbjct: 185 PVAPDTYT-----YNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNG 239
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
++ A + DQM G P+VVIY LI+ + ++ V +A +L+ M P +N
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYN 296
Query: 416 TVLSGLC---RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
L GLC R ++G +L+ E +R +G P +S LI +LC+ SA +L
Sbjct: 297 AALKGLCIAERWEDIG---ELMAEMVR---KGCSPNEATFSMLISSLCQNNLVDSAVEVL 350
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMV 510
QM G PD + +N ++ LS++ L LLN MV
Sbjct: 351 EQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV 389
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+E F +I L + +++ ++ + + + TP + +N++++ E L A
Sbjct: 528 PPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF-SEQGRLDDAL 586
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K + + D +Y +KGLC R D +L+ M PN V + H L
Sbjct: 587 --KLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLM 644
Query: 128 KN 129
N
Sbjct: 645 PN 646
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/466 (28%), Positives = 215/466 (46%), Gaps = 32/466 (6%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTY 84
R IND + A + + N PS+ F + LV+ K+M +G+ D +
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-- 142
IL+ C V GF +L + G++PN + ++TLI+ C GK+GRA L M
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 143 --EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+PN ++SI+I C+ + LLE G PDVV +++ LC V +
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
AV I C+ M+ G LP V TY LI G A + N
Sbjct: 250 AVHIF---------------CK----MKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLN 290
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+MK I + V + LI +C G + + IL+ M ++ G + ++ YN+++ G
Sbjct: 291 EMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM--TEMGVEPDVATYNTLMNGYCL 348
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ EA + + M + P S+ + G+C +++AK+ FD+M G +P+ V
Sbjct: 349 RMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVS 408
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ LI CQ R EA EL K+M +GY P T++ +L L +QG + A+ L
Sbjct: 409 YNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGL----F 464
Query: 439 RGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
R + L P Y+ +I +C+ G F+ A L ++ KG+ P+
Sbjct: 465 RAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPN 510
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 192/415 (46%), Gaps = 38/415 (9%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G++ + T++ L+ G C+ ++G +L VM +RG KPN Y+ +I LC+ G
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVG 210
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K L+ M+ EP+ V ++ ++ CK+ + A+ + K G +P VVT T
Sbjct: 211 KTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYT 270
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ L ++GR +A +L E +KGG +P++ +++LI
Sbjct: 271 SLIHGLRNLGRWKEAFGLLNE---------MKGG----------NIMPDLVAFSVLIDIM 311
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + A + M G+ + TY+TL+ G C + + K+ ++M SKG
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI-----SKG 366
Query: 307 RIS---PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
R+ ++ ++ G + + DEA + +M L P V + I G C +A+
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F M G PN+V Y L+ ++ + +A L + M G P T+N ++ G+
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGM 486
Query: 422 CRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
C+ G A +L E ++G+ P + +P I +C+ G A QM
Sbjct: 487 CKYGKFKDARELFAELSVKGLQ----PNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 184/407 (45%), Gaps = 30/407 (7%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP---NDV-TFSI 152
+ D + M + P+ V + L +L + SL ME +DV + +I
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI +C+ ++ +L K G P+V+T + ++ C G++ A+E+ +
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDV----- 186
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
M +G PNV +Y+I+I C G + + MK+ G + V
Sbjct: 187 --------------MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVV 232
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
Y+T++ LC +++ + I M+ + G + Y S+++GL + EA L
Sbjct: 233 IYNTIVDRLCKDRLVNEAVHIFCKMKGT--GILPTVVTYTSLIHGLRNLGRWKEAFGLLN 290
Query: 333 QME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M+ + P V S+ I C +G V +A+ M E G P+V Y+ L++ YC
Sbjct: 291 EMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRM 350
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
V EA ++ + M G +P +F+ +++G C+ + A +L +E RG +P +
Sbjct: 351 EVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTH---RGLIPDTV 407
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI LC+ A L M G P+ +T++ LL CLS+Q
Sbjct: 408 SYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQ 454
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 174/372 (46%), Gaps = 27/372 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I+GL R +V+K + + P + I+N+I+D L K+ +
Sbjct: 194 PNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHI 253
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM +G+ TY L+ GL R + F LL+ MK + P+ V ++ LI +CK
Sbjct: 254 FCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCK 313
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V AR ++ M EP+ T++ L+ YC +V A + E S G +PDV +
Sbjct: 314 EGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFS 373
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ C R+ +A ++ + EM +G +P+ +YN LIS
Sbjct: 374 FSILVNGYCKAKRIDEAKQLFD-------------------EMTHRGLIPDTVSYNTLIS 414
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ A ++F DM +G N VTY L+ L G +D + + + ME+S G
Sbjct: 415 GLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENS--GL 472
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
K + YN ++ G+ + + +A E ++ + L P + I G C G +++A +
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532
Query: 363 CFDQMIEEGGVP 374
F QM ++ P
Sbjct: 533 AFRQMEKDDCSP 544
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 173/390 (44%), Gaps = 30/390 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+A G + + ++Y+I++KGLC + + KLL MK G +P+ VIYNT++ LCK+
Sbjct: 187 MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V A + M+ P VT++ LI A LL + +PD+V +
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++++C G V +A I LK M G P+V TYN L++ YC
Sbjct: 307 LIDIMCKEGEVSEARVI-------------------LKTMTEMGVEPDVATYNTLMNGYC 347
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ A VF M G + ++ L+ G C RID+ ++ E + G
Sbjct: 348 LRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFD--EMTHRGLIPD 405
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
YN+++ GL + + EA E K M P V S+ + G ++ A F
Sbjct: 406 TVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFR 465
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M G P++V Y+ +I C+ + ++A EL E++ G P + G+C+ G
Sbjct: 466 AMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGG 525
Query: 426 ---NVGTALKLVEEDMRGIGRGSLPGSGHY 452
A + +E+D +G + G Y
Sbjct: 526 LLDEAHKAFRQMEKDDCSPAQGCINGRATY 555
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 100/226 (44%), Gaps = 8/226 (3%)
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
I+D L M ++ I + + L R + KQME SL
Sbjct: 72 INDALSAFNHMVNTNPLPS--IVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 347 KIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
IL FC +V+ ++I+ G PNV+ + LI+ +C E ++ A EL M
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
GY P +++ ++ GLCR G +KL+E M+ +G P Y+ ++ LC+
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEH-MKVVG--CEPDVVIYNTIVDRLCKDRL 246
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLL-LLNEM 509
A + +M G GILP +T+ SL+ L W LLNEM
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 202/420 (48%), Gaps = 32/420 (7%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLCKNGKVGRARS 137
D ++Y IL+ GLC NR + +LLH+M G P+ V Y+T+I+ K G + + S
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYS 109
Query: 138 LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
++M + PN VT++ +I A CK + + A+ +L G +PD +T ++ C
Sbjct: 110 TYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 169
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
S G+ +A+ FLK+M G P+V TYN L+ C+ G
Sbjct: 170 SSGQPKEAI-------------------VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCT 210
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A +F+ M G+ TY TL++G + G + + +L LM + G ++
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRNGIHPNHYVFSI 268
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ ++ + +EA+ +M + L P AV I C G VEDA F+QMI+EG
Sbjct: 269 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P ++Y+ LIH C + A EL+ EM G FN+++ C++G V +
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 388
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
KL + +R G P YS LI C G A+ LL MV G+ PD +T+++L+
Sbjct: 389 KLFDLMVR---IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/526 (26%), Positives = 228/526 (43%), Gaps = 75/526 (14%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PPD + TVI G + ++ + + ++P++ +NSI+ L K + +D A
Sbjct: 85 PPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAME 144
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M+ SGV D TY ++ G C + + + L M+S GV+P+ V YN+L+ L
Sbjct: 145 VL-TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 203
Query: 127 CKNGKVGRARSLMSDMEE---------------------------------------PND 147
CKNG+ AR + M + PN
Sbjct: 204 CKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 263
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
FSIL+CAY K+E + A+++ K G P+ VT V+ +LC GRV DA+
Sbjct: 264 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAM----- 318
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+ ++M +G P YN LI C + A ++ +M GI
Sbjct: 319 --------------LYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 364
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N + ++++I C GR+ + K+ LM + G K I Y++++ G + DEA
Sbjct: 365 CLNTIFFNSIIDSHCKEGRVIESEKLFDLM--VRIGVKPDIITYSTLIDGYCLAGKMDEA 422
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+ L M + P V S I G+C ++DA F +M G P+++ Y+ ++
Sbjct: 423 TKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQG 482
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE----DMRGI 441
Q R A EL +T G ST+N +L GLC+ AL++ + D++
Sbjct: 483 LFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLE 542
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
R ++ +I AL + G A L V G++P+Y T+
Sbjct: 543 ART-------FNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTY 581
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 24/324 (7%)
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
+PDV + +L LC R +A+E+L + G C P+V +
Sbjct: 48 IPDVFSYNILLNGLCDENRSQEALELLHIMADDG-----------------GDCPPDVVS 90
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y+ +I+ + + G LD +N+M IS N VTY+++I LC +D +++L M
Sbjct: 91 YSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM- 149
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
K G YNS+++G Q EA+ +LK+M + + P V + + C +G
Sbjct: 150 -VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 208
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+A++ FD M + G P + Y L+ Y + + E L+ M +G P F+
Sbjct: 209 CTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 268
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ +Q V A+ LV MR +G P + Y +I LC+ G + A + QM+
Sbjct: 269 LVCAYAKQEKVEEAM-LVFSKMR--QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325
Query: 477 GKGILPDYLTWNSLLICLSQQTTW 500
+G+ P + +NSL+ L W
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKW 349
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 147/347 (42%), Gaps = 55/347 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ +F ++ + + + + + + + P+ + +++ +L K Y
Sbjct: 261 PNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 320
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTN--------------------------------- 95
++M+ G+ + Y L+ GLC N
Sbjct: 321 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 380
Query: 96 --RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVT 149
RV + KL +M GVKP+ + Y+TLI C GK+ A L++ M +P+ VT
Sbjct: 381 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 440
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI---LE 206
+S LI YCK + +ALVL + S G PD++T +L+ L R A E+ +
Sbjct: 441 YSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGIT 500
Query: 207 ESGEQGRLGK----VKGGCRF-----LKEMERKGCLPNVD----TYNILISSYCETGVLD 253
+SG Q L + G C+ M + CL ++ T+NI+I + + G D
Sbjct: 501 KSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRND 560
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
A D+F +G+ N+ TY + + G +++ ++ MED+
Sbjct: 561 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDN 607
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 8/152 (5%)
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG--YLPIASTFN 415
EDA+ FD+++ G +P+V Y+ L++ C E R +EA EL+ M G P +++
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
TV++G ++G++ E + + P Y+ +I ALC+ A +L M
Sbjct: 93 TVINGFFKEGDLDKTYSTYNE---MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTM 149
Query: 476 VGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
V G++PD +T+NS++ C S Q ++ L
Sbjct: 150 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL 181
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 242/527 (45%), Gaps = 75/527 (14%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAFY 68
E ++I ++ GR + + V + + +N PS+ +N+I+++LV+ + F
Sbjct: 76 EGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFL 135
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY--------- 119
R K + G+ D YT+ I +K C T R +LL+ M S+G + N+V Y
Sbjct: 136 RMKNV--GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYE 193
Query: 120 --------------------------NTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
N L+H+LCK G+V + L++ + + N T
Sbjct: 194 ENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFT 253
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+I I C++ L A+ +L+ G PDVVT ++ LC V++A
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAE------- 306
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
++L ++ G P+ TYN LI YC+ G+L +A + G
Sbjct: 307 ------------KYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVP 354
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ TY +LI GLC ID L + +G K + YN ++ GL +E +AL+
Sbjct: 355 DEFTYCSLINGLCQNDEIDRALALFN--AALGKGLKPTVILYNMLIKGLCQEGLILQALQ 412
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+ +M + +L I G C G V DA + I +G VP+V ++ LI YC
Sbjct: 413 MMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYC 472
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK---LVEEDMRGIGRG 444
++ ++ +++ +M HG P T+N+VL+GL + A+K L+E + +G
Sbjct: 473 KQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSK------AVKNEDLMETFETMVEKG 526
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+P Y+ L ++LC+ G A L+ +++ KGI PD +++ +++
Sbjct: 527 CVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/528 (26%), Positives = 230/528 (43%), Gaps = 70/528 (13%)
Query: 14 FITVIRGLGRARMINDVVKATDLVS---RFNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ TV+ G N V+A +L + R + P + FN +L L K+
Sbjct: 184 YCTVVAGFYEE---NYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLN 240
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G+ + +T+ I ++GLC + +L + G+ P+ V YNTLI LCKN
Sbjct: 241 KVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNS 300
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V A + + EP+ T++ LI YCK L NA +L+ + GFVPD T
Sbjct: 301 NVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYC 360
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ LC + A+ + + LGK G P V YN+LI
Sbjct: 361 SLINGLCQNDEIDRALALFNAA-----LGK--------------GLKPTVILYNMLIKGL 401
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGSK 305
C+ G++ AL + N+M +G S + TY+ +I GLC G + D LM D+ +G
Sbjct: 402 CQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDAN---NLMNDAIAKGYV 458
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ +N+++ G ++ + + ++ L +M + P + + + G ED
Sbjct: 459 PDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMET 518
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F+ M+E+G VPN + Y+ L + C+ +V EA +L+ E+ G P +F T++SG
Sbjct: 519 FETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFAN 578
Query: 424 QGNVGTALKLVEE-------------------------DMR---------GIGRGSLPGS 449
G++ A +L D+ G G G P +
Sbjct: 579 NGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAG-GCAPDT 637
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y +I C G S L++M+ KG +P T+ ++ CL Q
Sbjct: 638 YTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQ 685
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 231/498 (46%), Gaps = 28/498 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD S F ++ L + + + + + V + M +L FN + L ++ +
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ D TY L+ GLC + V + K LH + + G++P+ YNTLI CK
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A ++ P++ T+ LI C+ + + AL L + G P V+
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ LC G ++ A++++ E E G ++G V + +
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG +P+V T+N LI YC+ +++ + + N M G++ + +TY++++ GL + +
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
D ++ + M + +G YN + L + + +EAL+ + ++ + + P V +
Sbjct: 514 DLMETFETMVE--KGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFAT 571
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPN-VVIYDCLIHAYCQEERVREASELMKEMTGH 405
I GF +G+++ A + F +M E+ V + Y+ +I+A+ ++ + +L EM
Sbjct: 572 IISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAG 631
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+ ++ G C GN + K + E I +G +P + +I LC +
Sbjct: 632 GCAPDTYTYRVMIDGFCITGNTDSGYKFLLE---MIEKGFIPSLTTFGRVINCLCVQHRV 688
Query: 466 QSASMLLVQMVGKGILPD 483
A ++ MV GI+P+
Sbjct: 689 HEAVDIIHFMVHNGIVPE 706
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 7/288 (2%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR GKV+ + M+ C P+V +YN +++ E+G A VF MK GI +
Sbjct: 87 GRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDV 146
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
T+ I+ C R L++L M +G + Y +V+ G Y EN + EA E
Sbjct: 147 YTFTIRIKSFCRTKRPHSALRLLNNM--VSQGCQLNAVAYCTVVAGFYEENYRVEAYELF 204
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
M + +FP + + C G V++++R ++++++G N+ ++ I C++
Sbjct: 205 NDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRK 264
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+ A ++ + G P T+NT++ GLC+ NV A K + + + G G P
Sbjct: 265 GMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG---GLEPDG 321
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI C+ G Q+A +L + KG +PD T+ SL+ L Q
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQN 369
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 175/418 (41%), Gaps = 77/418 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + T+I G + M+ + K P + S+++ L + D ID A A
Sbjct: 319 PDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALAL 378
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + G++ Y +L+KGLC + ++++ M G + YN +I+ LC
Sbjct: 379 FNAAL-GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A +LM+D P+ TF+ LI YCK+ + + +L K +S G PDV+
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T VL L + D +E E M KGC+PN TYNIL
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFET-------------------MVEKGCVPNKITYNILT 538
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S C+ G ++ ALD+ +++ GI+ + V++ T+I G + G + ++ + M + +
Sbjct: 539 ESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKV 598
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF---------PRAVDRSLKILGFCVD 354
S + YN ++ N E L+ L EKLF P + I GFC+
Sbjct: 599 SH-TTATYNIMI------NAFAEKLD-LHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCIT 650
Query: 355 GNVEDAKRCFDQMIEEGG-----------------------------------VPNVV 377
GN + + +MIE+G VP VV
Sbjct: 651 GNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 58/291 (19%)
Query: 255 ALDVFNDMKI-DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
AL++FN +K DG + +TY +I+ L G +L ++ R+ NS
Sbjct: 23 ALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVL---------AETRMDIDNS 73
Query: 314 VLYGLY--------RENQQDEALE----------------------------YLKQMEKL 337
+L G+Y R+ + EA++ Y KQ K+
Sbjct: 74 LLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKV 133
Query: 338 F---------PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
F P +++I FC A R + M+ +G N V Y ++ + +
Sbjct: 134 FLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYE 193
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
E EA EL +M G P STFN +L LC++G V + +L+ + ++ +G
Sbjct: 194 ENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLK---KGMCSN 250
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
++ I+ LC KG A +L ++ +G+ PD +T+N+L+ L + +
Sbjct: 251 LFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSN 301
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 211/448 (47%), Gaps = 47/448 (10%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK--------SRGVKPNSVIYNT 121
+KM+ +Q + T+ IL+ +C RV D ++L M S V+P+ VIYNT
Sbjct: 329 EKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNT 388
Query: 122 LIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI LCK G+ LM M P+ +T++ LI +CK + L ++
Sbjct: 389 LIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKE 448
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P+VVT+ ++ +C GRV AV F E +R+G +
Sbjct: 449 GVAPNVVTVNTLVGGMCRTGRVSSAVN-------------------FFVEAQRRGMKGDA 489
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI+++C + A+++FN+M G S + + Y TLI G GR+ D +L
Sbjct: 490 VTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA- 548
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
E K G + YN+++ G R N+ E LK+ME+ L P + + I +
Sbjct: 549 -ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKN 607
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST- 413
G+++ A++ +MI+ G VP V Y +I+AYC EA E+ K+M +P +
Sbjct: 608 GDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVI 667
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+N +++ LC+ V +A+ L+ EDM+ G P + Y+ + K L ++ + +
Sbjct: 668 YNILINSLCKNNKVKSAVSLM-EDMKIW--GVTPNTTTYNAIFKGLRDEKDLEKVFEFMD 724
Query: 474 QMVGKGILPDYLTWNSLLICLSQQTTWL 501
+M+ PDY+T L T WL
Sbjct: 725 RMIEHACNPDYITMEIL-------TEWL 745
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 194/438 (44%), Gaps = 40/438 (9%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV + L+ LC + G+ L M G S N+L+ L + G R
Sbjct: 265 GVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRM 324
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK--------SFSFGFVPDVV 183
LM M E PN VTF ILI CK + +AL +LEK S PDVV
Sbjct: 325 NELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVV 384
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+++ LC VGR + + ++E Q KGC P+ TYN LI
Sbjct: 385 IYNTLIDGLCKVGRQQEGLGLMERMRSQ------------------KGCAPDTITYNCLI 426
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ G ++ ++F++M +G++ N VT +TL+ G+C GR+ + +E + G
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF--FVEAQRRG 484
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
KG Y +++ N ++A+E +M K P A+ I GF G + DA
Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADAS 544
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++ + G P+ V Y+ LI +C+ + E++KEM G P T+NT+++
Sbjct: 545 FVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYA 604
Query: 422 CRQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM-VGKG 479
+ G+ LK ++ MR I G +P Y +I A C G A + M
Sbjct: 605 SKNGD----LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASK 660
Query: 480 ILPDYLTWNSLLICLSQQ 497
+ P+ + +N L+ L +
Sbjct: 661 VPPNTVIYNILINSLCKN 678
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 183/426 (42%), Gaps = 50/426 (11%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEE--------PNDVTFSILICAYCK------- 159
N+ + N + L ++G+V A ++ +M E PND T IL K
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEEL 248
Query: 160 --EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
E+ +VN L+ K G + + +++ LC + ++ E + G + +
Sbjct: 249 LSEDEIVN---LVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLES 305
Query: 218 KGGCRFLKEMERKGCL----------------PNVDTYNILISSYCETGVLDSALDVFND 261
L + R+G PNV T+ ILI+ C+ +D AL+V
Sbjct: 306 AACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEK 365
Query: 262 M----KIDGISW----NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
M + GIS + V Y+TLI GLC GR +GL +++ M K + I+ YN
Sbjct: 366 MSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTIT-YNC 424
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + + ++ E +M K + P V + + G C G V A F + G
Sbjct: 425 LIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRG 484
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+ V Y LI+A+C +A EL EM G P A + T++SG + G + A
Sbjct: 485 MKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADA- 543
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
V +++ +G P + Y+ LI C F +L +M G+ PD +T+N+L+
Sbjct: 544 SFVLAELKKLG--IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI 601
Query: 492 ICLSQQ 497
S+
Sbjct: 602 AYASKN 607
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 119/267 (44%), Gaps = 46/267 (17%)
Query: 23 RARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQ 78
R M D V T L++ F N ++++FN +M+ SG
Sbjct: 482 RRGMKGDAVTYTALINAFCNVNNFEKAMELFN--------------------EMLKSGCS 521
Query: 79 GDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL 138
D Y L+ G R+ D +L +K G++P++V YNTLI C+ K R +
Sbjct: 522 PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEM 581
Query: 139 MSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+ +MEE P+ +T++ LI K +L A ++ K G VP V T V+ C
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G +A+EI ++ ++ PN YNILI+S C+ + S
Sbjct: 642 NGNGNEAMEIFKDMKAASKVP------------------PNTVIYNILINSLCKNNKVKS 683
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGL 281
A+ + DMKI G++ N TY+ + +GL
Sbjct: 684 AVSLMEDMKIWGVTPNTTTYNAIFKGL 710
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 237/492 (48%), Gaps = 44/492 (8%)
Query: 50 NSILDVLVKED-IDLARAFYRKKMMASGVQGDDYT-YAILMKGLCLTNRVGDGFKLLHVM 107
N++L L ++ +D A A + G+ G D + L+ G C + F + M
Sbjct: 141 NTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERM 200
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
K++GV + V YN+L+ LC+ G+V AR ++ M+ EPN VT+++ I YC+ +
Sbjct: 201 KAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAV 260
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
+A L E+ G +PDVVT++ ++ LC GR +A + E + G
Sbjct: 261 DDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCML 320
Query: 213 --RLGKVKGG---CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
L K + G L E+ +G + ++ Y L+ C+ G +D A D+F D
Sbjct: 321 IDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNH 380
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQ 323
+ N VTY LI LC G +D ++L ME+ ISP ++S++ GL +
Sbjct: 381 TPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS------ISPNVVTFSSIINGLVKRGW 434
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNV-----EDAKRCFDQMIEEGGVPNVVI 378
+A +Y+++M++ R +D ++ G +DG+ E A + +M+ EG N I
Sbjct: 435 VGKATDYMREMKE---RGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFI 491
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
D L++ + ++ +A L +EM G L + T++ GL + GN+ A K+ +E
Sbjct: 492 VDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELT 551
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ- 497
+ LP + Y+ I LC G + A L +M G+ PD +T+N+++ S++
Sbjct: 552 E---KNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREG 608
Query: 498 TTWLLLLLLNEM 509
T L LLN M
Sbjct: 609 KTAKALKLLNGM 620
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 140/563 (24%), Positives = 250/563 (44%), Gaps = 37/563 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I L +A ++ + + +++P++ F+SI++ LVK Y
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDY 441
Query: 69 RKKMMASGVQGDDYTYAILMKG--LCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++M G+ + TY ++ G CL + H M GV+ N I ++L++ L
Sbjct: 442 MREMKERGIDPNVVTYGTVIDGSFKCLGQEAA--LDVYHEMLCEGVEVNKFIVDSLVNGL 499
Query: 127 CKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
KNGK+ +A +L +M E + V ++ LI K NL A + ++ +PD
Sbjct: 500 KKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDA 559
Query: 183 VTITKVLELLCSVGRVMDAVEILEES----------------GEQGRLGKVKGGCRFLKE 226
V + LC +G+ +A LEE Q R GK + L
Sbjct: 560 VVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNG 619
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M+R PN+ TY+ LI E G ++ A + N+M G S +T+ +++ G R
Sbjct: 620 MKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRR 679
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
D L+I + M ++ G I+ YN+++ L +A+ L++M + P +
Sbjct: 680 SDLILEIHEWMMNA--GLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITF 737
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ ILG G++++A +DQM+ G PNV ++ L+ R+ E+ ++ EM
Sbjct: 738 NALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKK 797
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T++ +++G +Q N A++L E +G+G LP Y+ LI + G
Sbjct: 798 RGIEPSNLTYDILVTGYGKQSNKVEAVRLYCE---MVGKGFLPKVSTYNALISDFSKVGM 854
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEK 524
A L +M +G+LP T++ L+ + W L E+ F+ + E
Sbjct: 855 MSQAKELFNEMQNRGVLPTSCTYDILV------SGWSKLRNGTEVRKFLKDMKEKGFSPS 908
Query: 525 RCKLRSLNHLAHGAGSVWLGLRI 547
+ L S++ G W R+
Sbjct: 909 KGTLSSISRAFSKPGMSWEARRL 931
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 143/569 (25%), Positives = 248/569 (43%), Gaps = 98/569 (17%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKI---------FNSILDVLVKE-DIDLARAFYRK 70
+G +++ K D+ + F + +K +NS++ L + ++D AR
Sbjct: 175 VGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMV-D 233
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
M GV+ + TY + + C N V D F L M +GV P+ V + L+ LCK+G
Sbjct: 234 TMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDG 293
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L +ME+ PN VT+ +LI K + +L LL + S G V D++ T
Sbjct: 294 RFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYT 353
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+++ LC G++ +A ++ + + G V G + L EME K
Sbjct: 354 ALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEK 413
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG---------- 280
PNV T++ +I+ + G + A D +MK GI N VTY T+I G
Sbjct: 414 SISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAA 473
Query: 281 -------LCSGGRID--------DGLKILQLMEDSKE-----GSKGRI---SPYNSVLYG 317
LC G ++ +GLK +E ++ +G + Y +++ G
Sbjct: 474 LDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDG 533
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L++ A + +++ + L P AV ++ I C+ G ++A+ ++M G P+
Sbjct: 534 LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V Y+ +I A +E + +A +L+ M P T++T++ GL G V A L+
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLN 653
Query: 436 E-DMRGIGRGSLP--------GSGH-----------------------YSPLIKALCEKG 463
E G SL G Y+ L++ LC G
Sbjct: 654 EMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNG 713
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ A ++L +M G+GI PD +T+N+L++
Sbjct: 714 MTRKAMVVLEEMSGRGIAPDTITFNALIL 742
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 194/411 (47%), Gaps = 28/411 (6%)
Query: 49 FNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+ +++D L K +L AF +++ + D Y + + LC+ + + L M
Sbjct: 527 YTTLIDGLFKTG-NLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEM 585
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
+S G+KP+ V YNT+I + + GK +A L++ M+ +PN +T+S LI + +
Sbjct: 586 QSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAV 645
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV-EILEESGEQG---------- 212
A LL + S GF P +T +VL+ CS GR D + EI E G
Sbjct: 646 EKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNT 704
Query: 213 --RL----GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
R+ G + L+EM +G P+ T+N LI + ++G LD+A ++ M G
Sbjct: 705 LVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHG 764
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
IS N T++TL+ GL S GRI + +L M+ K G + Y+ ++ G +++ + E
Sbjct: 765 ISPNVATFNTLLGGLESAGRIGESDMVLNEMK--KRGIEPSNLTYDILVTGYGKQSNKVE 822
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A+ +M + P+ + I F G + AK F++M G +P YD L+
Sbjct: 823 AVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVS 882
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ + E + +K+M G+ P T +++ + G A +L++
Sbjct: 883 GWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLK 933
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 193/455 (42%), Gaps = 68/455 (14%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D +Y ++M G + LL M RGV ++V NT++ LC++G+V RA +L
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPE-ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 140 SDMEEPND------VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
M V ++ L+ YCK ++ A + E+ + G DVV ++ LC
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G V A ++++ M+R G PNV TY + I YC +D
Sbjct: 221 RAGEVDAARDMVDT-------------------MKRDGVEPNVVTYTMFIVEYCRRNAVD 261
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A ++ +M G+ + VT L+ GLC GR + + + ME K G+ Y
Sbjct: 262 DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREME--KIGAAPNHVTYCM 319
Query: 314 VLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG-----FCVDGNVEDAKRCFDQMI 368
++ L + + +E+L L + + R V L + C +G +++AK F +
Sbjct: 320 LIDTLAKAQRGNESLSLLGE---VVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHAL 376
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ PN V Y LI A C+ V A +++ EM P TF+++++GL ++G VG
Sbjct: 377 SDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVG 436
Query: 429 TALKLVEE-DMRGIGR----------GSLPGSGHYSP---------------------LI 456
A + E RGI GS G + L+
Sbjct: 437 KATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLV 496
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L + G + A L +M +G+L D++ + +L+
Sbjct: 497 NGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI 531
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 164/355 (46%), Gaps = 34/355 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD+ + T+I R +K + + R ++ P+L +++++ L + +
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLC 127
+M +SG T+ +++ C R D +H M + G+ + +YNTL+ LC
Sbjct: 652 LNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLC 710
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
NG +A ++ +M P+ +TF+ LI + K +L NA ++ G P+V
Sbjct: 711 YNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVA 770
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFLKE 226
T +L L S GR+ ++ +L E ++G + KV+ R E
Sbjct: 771 TFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEA-VRLYCE 829
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M KG LP V TYN LIS + + G++ A ++FN+M+ G+ TYD L+ G +
Sbjct: 830 MVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWS---K 886
Query: 287 IDDGLKILQLMEDSKEG----SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ +G ++ + ++D KE SKG +S S+ + EA LK + K+
Sbjct: 887 LRNGTEVRKFLKDMKEKGFSPSKGTLS---SISRAFSKPGMSWEARRLLKNLYKV 938
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 235 NVDT--YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+VDT YN+++S + E G L + + +M G+ ++ VT +T++ GLC GR+D
Sbjct: 100 SVDTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAA 158
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ ++M + +NS++ G + + A ++M + + V + + G
Sbjct: 159 LAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAG 218
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G V+ A+ D M +G PNVV Y I YC+ V +A L +EM G LP
Sbjct: 219 LCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPD 278
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T + ++ GLC+ G A L E M I G+ P Y LI L + +
Sbjct: 279 VVTLSALVGGLCKDGRFSEAYALFRE-MEKI--GAAPNHVTYCMLIDTLAKAQRGNESLS 335
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQ 497
LL ++V +G++ D + + +L+ L ++
Sbjct: 336 LLGEVVSRGVVMDLIMYTALMDWLCKE 362
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 223/474 (47%), Gaps = 39/474 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ +VVK V TP LK + D + +D+ ++M D ++ I
Sbjct: 110 LGNVVKKGFRVEAITFTPLLKGLCA--DKRTSDAMDIVL----RRMTELSCMPDVFSCTI 163
Query: 87 LMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
L+KGLC NR + +LLH+M + G P+ V Y T+I+ K G +A S +M
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ VT+S +I A CK + + A+ +L G +P+ +T +L CS +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+ FLK+M G P+V TYN L+ C+ G A +F
Sbjct: 284 EAIG-------------------FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ + TY TL++G + G + + +L LM + G +N ++
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM--VRNGIHPDHHVFNILICAYA 382
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
++ + DEA+ +M + L P V I C G+V+DA F+QMI+EG PN++
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y LIH+ C ++ +A EL+ EM G FN+++ C++G V + KL +
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G P YS LI C G A+ LL M G+ PD +T+N+L+
Sbjct: 503 VR---IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 200/438 (45%), Gaps = 32/438 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + + T+++G + ++ DL+ R + P +FN ++ K E +D A
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ + TY ++ LC + V D M G+ PN ++Y +LIHSLC
Sbjct: 394 F-SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A L+ +M + N + F+ +I ++CKE ++ + L + G P+V+
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G++ +A + L M G P+ TYN LI
Sbjct: 513 TYSTLIDGYCLAGKMDEAT-------------------KLLSSMFSVGMKPDCVTYNTLI 553
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC +D AL +F +M G+S N +TY+ +++GL R ++ + +K G
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI--TKSG 611
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
++ +S YN +L+GL + N DEAL + + + R+ I+ G ++AK
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F G VPN Y + + + E +L M +G + N ++ L
Sbjct: 672 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVREL 731
Query: 422 CRQGNV---GTALKLVEE 436
++G + GT L +++E
Sbjct: 732 LQRGEITRAGTYLSMIDE 749
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 165/378 (43%), Gaps = 27/378 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P T+ ILI C+ L L GF + +T T +L+ LC+ R DA++I
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 205 -LEESGEQGRLGKV-------KGGCRFLKEMER------------KGCLPNVDTYNILIS 244
L E + V KG C + E G P+V +Y +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ + G D A +++M IS + VTY ++I LC G +D +++L M K G
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTM--VKNGV 262
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YNS+L+G Q EA+ +LK+M + + P V + + C +G +A++
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD M + G P++ Y L+ Y + + E L+ M +G P FN ++
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+Q V A+ LV MR G P Y +I LC+ G A + QM+ +G+ P
Sbjct: 383 KQEKVDEAM-LVFSKMRQHGLN--PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Query: 483 DYLTWNSLLICLSQQTTW 500
+ + + SL+ L W
Sbjct: 440 NIIVYTSLIHSLCIFDKW 457
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/433 (29%), Positives = 212/433 (48%), Gaps = 45/433 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRG------VKPNSVIYNTLIHSLCKNGKVGRAR 136
T+ IL+ LC R+ + ++ ++ +G V+P+ V++NTLI LCK GK
Sbjct: 318 TFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGL 377
Query: 137 SLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
SL+ +M+ PN VT++ LI + K N A L + G P+V+T+ +++
Sbjct: 378 SLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDG 437
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC GRV AVE F EM+ KG N TY LIS++C
Sbjct: 438 LCKHGRVHRAVE-------------------FFNEMKGKGLKGNAATYTALISAFCGVNN 478
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
++ A+ F +M G S + V Y +LI GLC GR++D ++ ++ + G S Y
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLA--GFSLDRSCY 536
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ G ++ + + E L +ME+ + P + + I G+ A + ++MI+
Sbjct: 537 NVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIK 596
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST-FNTVLSGLCRQGNVG 428
EG P+VV Y +IHAYC ++ V E ++ EM +P + +N ++ LCR +V
Sbjct: 597 EGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A+ L+ EDM+ + P + Y+ ++K + +K A L+ +MV + PDY+T
Sbjct: 657 RAISLM-EDMK--VKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITME 713
Query: 489 SLLICLSQQTTWL 501
L T WL
Sbjct: 714 VL-------TEWL 719
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 196/431 (45%), Gaps = 66/431 (15%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K+ GV D + L+ LC + G +++LH + G ++ N L+ L +
Sbjct: 236 KLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGR 295
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK------SFSFGFVP 180
+ R L+++ME+ P+ VTF IL+ CK + AL + ++ S G P
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DVV +++ LC VG+ D + +LEE ++G + PN TYN
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEM----KMGNINR--------------PNTVTYN 397
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI + + G D A ++F M +G+ N +T +TL+ GLC GR+ ++ M+
Sbjct: 398 CLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKG- 456
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
+G KG + Y ++ I FC N+ A
Sbjct: 457 -KGLKGNAATYTAL---------------------------------ISAFCGVNNINRA 482
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+CF++M+ G P+ V+Y LI C R+ +AS ++ ++ G+ S +N ++SG
Sbjct: 483 MQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISG 542
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C++ + +L+ E G P + Y+ LI L + G F +AS ++ +M+ +G+
Sbjct: 543 FCKKKKLERVYELLTEMEE---TGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGL 599
Query: 481 LPDYLTWNSLL 491
P +T+ +++
Sbjct: 600 RPSVVTYGAII 610
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 197/460 (42%), Gaps = 45/460 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLV------SRFNMTPSLKIFNSILDVLVK---- 58
P F ++ L +AR I++ ++ D + + + P + +FN+++D L K
Sbjct: 314 PSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKE 373
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
ED + + M + + + TY L+ G +L M GV+PN +
Sbjct: 374 ED---GLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVIT 430
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF 174
NTL+ LCK+G+V RA ++M+ + N T++ LI A+C N+ A+ E+
Sbjct: 431 LNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEML 490
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
S G PD V ++ LC GR+ DA ++ + ++ G
Sbjct: 491 SSGCSPDAVVYYSLISGLCIAGRMNDASVVVSK-------------------LKLAGFSL 531
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+ YN+LIS +C+ L+ ++ +M+ G+ + +TY+TLI L G K++
Sbjct: 532 DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVM 591
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGF 351
+ M KEG + + Y ++++ + DE ++ +M K+ P V ++ I
Sbjct: 592 EKM--IKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDAL 649
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C + +V+ A + M + PN Y+ ++ ++ + +A ELM M P
Sbjct: 650 CRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDY 709
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
T + L G + VE G S P S
Sbjct: 710 ITMEVLTEWLSAVGEIEKLKHFVE----GYQDSSYPASSQ 745
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 198/435 (45%), Gaps = 44/435 (10%)
Query: 92 CLTNR--VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND-- 147
CL N V D L + + P + + L+ L K+G+ G A ++ +M + N
Sbjct: 150 CLENARLVNDSLLLFNQLDPSSKSPQ--LCHGLLRVLLKSGRAGDALHVLDEMPQANSGF 207
Query: 148 -VTFSILICAYCKE-ENLVNALV--LLEKSFSFGFVPDVVTITKVLELLCS--------- 194
VT I+ + + + V L+ K G PD +T+++ LC
Sbjct: 208 SVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWE 267
Query: 195 -------VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+G +DA GR +K L EME++ P+V T+ IL++ C
Sbjct: 268 VLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLC 327
Query: 248 ETGVLDSALDVFNDMKIDGIS-W-----NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+ +D AL VF+ ++ G S W + V ++TLI GLC G+ +DGL L+E+ K
Sbjct: 328 KARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGL---SLLEEMK 384
Query: 302 EGSKGRISP--YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
G+ R + YN ++ G ++ D A E +QM E + P + + + G C G V
Sbjct: 385 MGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRV 444
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
A F++M +G N Y LI A+C + A + +EM G P A + ++
Sbjct: 445 HRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSL 504
Query: 418 LSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+SGLC G + A +V + + G SL S Y+ LI C+K + LL +M
Sbjct: 505 ISGLCIAGRMNDASVVVSKLKLAGF---SLDRSC-YNVLISGFCKKKKLERVYELLTEME 560
Query: 477 GKGILPDYLTWNSLL 491
G+ PD +T+N+L+
Sbjct: 561 ETGVKPDTITYNTLI 575
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 207/454 (45%), Gaps = 30/454 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T++ GL I D VK D + + PSL + +I+ L K
Sbjct: 139 PTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQL 198
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM G + D Y ++ LC R + M +G+ PN V Y++++H C
Sbjct: 199 LKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCN 258
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A SL M PN VTF+IL+ CKE ++ A + E G PD T
Sbjct: 259 LGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYT 318
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +++ C ++ +A ++ + M KG P+V YNILI+
Sbjct: 319 YSALMDGYCLQSQMDEAQKLFDI-------------------MVGKGFAPSVRVYNILIN 359
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C++ L+ A + ++M ++ + VTY TL++G C GR K+ + E G
Sbjct: 360 GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK--EMCSYGL 417
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y+ +L GL + DEA LK M+ K+ P ++ I G C G +E A+
Sbjct: 418 LPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARE 477
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + +G P+VV Y +I +E EA E+ ++M +G LP + T+N + G
Sbjct: 478 LFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL 537
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
R G+ A++L+EE +GRG S + L+
Sbjct: 538 RNGDPSNAVRLIEE---MVGRGFSADSSTFQMLL 568
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/407 (30%), Positives = 194/407 (47%), Gaps = 39/407 (9%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC--KEENLVNAL 167
P V++N L+ SL K SL M+ PN T +ILI C +++ A
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------------- 212
L K F G P VT +L LCS +++DAV++ +E G+ G
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186
Query: 213 -RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
++G + LK+ME KGC P+V YN +I S C+ + A+ F++M GI N
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY-----GLYRENQQDE 326
VTY +++ G C+ G++++ + + M GR N+V + GL +E E
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQM-------IGRNVMPNTVTFTILVDGLCKEGMILE 299
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A + M + + P A S + G+C+ +++A++ FD M+ +G P+V +Y+ LI+
Sbjct: 300 ARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILIN 359
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+C+ R+ EA L+ EM P T++T++ G C+ G A KL +E G
Sbjct: 360 GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE---MCSYG 416
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP S YS L+ LC+ G A LL M I P +N L+
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILI 463
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 218/492 (44%), Gaps = 32/492 (6%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
I+ P +F ++ L + + + V+ + N+ P++ +++ L + D
Sbjct: 63 IRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHV 122
Query: 65 RAFYRK--KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ KM G+Q T+ L+ GLC ++ D KL + G P+ + Y T+
Sbjct: 123 HFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTI 182
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I LCK G A L+ MEE P+ V ++ +I + CK+ A+ + G
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGI 242
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+VVT + +L C++G++ +A + K+M + +PN T
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSL-------------------FKQMIGRNVMPNTVT 283
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
+ IL+ C+ G++ A VF M +G+ + TY L+ G C ++D+ K+ +M
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM- 342
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+G + YN ++ G + + +EA L +M L P V S + GFC G
Sbjct: 343 -VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGR 401
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ A++ F +M G +P+ + Y L+ C+ + EA L+K M P +N
Sbjct: 402 PQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNI 461
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ G+C G + A +L +G P Y+ +I L ++G A + +MV
Sbjct: 462 LIQGMCNFGKLEAARELFSNLFV---KGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV 518
Query: 477 GKGILPDYLTWN 488
G LP+ T+N
Sbjct: 519 VNGCLPNSCTYN 530
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 161/331 (48%), Gaps = 25/331 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + +++ G +N+ + N+ P+ F ++D L KE + L
Sbjct: 243 PPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARR 302
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M +GV+ D YTY+ LM G CL +++ + KL +M +G P+ +YN LI+ C
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHC 362
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ ++ A++L+S+M + P+ VT+S L+ +C+ A L ++ S+G +PD +
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSI 422
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +L+ LC G + +A R LK M+ P++ YNILI
Sbjct: 423 TYSILLDGLCKHGHLDEAF-------------------RLLKAMQESKIEPHICIYNILI 463
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C G L++A ++F+++ + GI + VTY +I GL G ++ ++ + M G
Sbjct: 464 QGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKM--VVNG 521
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
YN + G R A+ +++M
Sbjct: 522 CLPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P ++ +I G ++R +N+ + ++TP +++++ +
Sbjct: 349 PSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKL 408
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M + G+ D TY+IL+ GLC + + F+LL M+ ++P+ IYN LI +C
Sbjct: 409 FKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCN 468
Query: 129 NGKVGRARSLMSDM--------------------EE-------------------PNDVT 149
GK+ AR L S++ +E PN T
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+++ I + + + NA+ L+E+ GF D T +L+L
Sbjct: 529 YNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 46/184 (25%)
Query: 350 GFCVDGN----VEDAKRCFDQMIEEGGVPNVVIYD------------------------- 380
GFC + N V DA F+Q++ +P VV+++
Sbjct: 39 GFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS 98
Query: 381 ----------CLIHAYCQEER--VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
LI+ C R V A + +M G P TF T+L+GLC + +
Sbjct: 99 NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158
Query: 429 TALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A+KL +E IG+ G P Y+ +IK LC+ G +A LL +M KG PD + +
Sbjct: 159 DAVKLFDE----IGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAY 214
Query: 488 NSLL 491
N+++
Sbjct: 215 NTVI 218
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 144/487 (29%), Positives = 227/487 (46%), Gaps = 33/487 (6%)
Query: 32 KATDLVSR----FNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAI 86
KAT++ R + P + N +L +LV++ D AR Y +M+ D+Y+ +
Sbjct: 925 KATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLY-DEMLGKDSGADNYSTCV 983
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L++GLCL RV +G KL+ G P+ V YN LI C+ G +GR L+ +ME
Sbjct: 984 LVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNG 1043
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P VT+ LI K+ +L L + GF P+V V++ LC+ A+
Sbjct: 1044 FLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAM 1103
Query: 203 EILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
IL++ G G V+ FL+E R+ PN +Y LI +
Sbjct: 1104 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1163
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G L A D+ +M G + + VT+ LI GL G++ + L + + M + +
Sbjct: 1164 CMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV 1223
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN ++ GL ++ A L++M + + P + I GF N+ DA++ F
Sbjct: 1224 NI--YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1281
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M +G P++V + +I YCQ + EA M M G +P T+ TV+SG +Q
Sbjct: 1282 EFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1341
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
GN+ AL+ + DM I R P YS LI C+ G SA L M + + P+
Sbjct: 1342 GNLNGALRWL-CDM--IKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNV 1398
Query: 485 LTWNSLL 491
+T+ L+
Sbjct: 1399 VTYTILI 1405
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 170/394 (43%), Gaps = 35/394 (8%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFY---RKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
P+L + S+++ L K+ D++ + + RK+ + VQ Y ++ LC
Sbjct: 1046 PTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ----IYNSVIDALCNCRSATQ 1101
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILIC 155
+L M + G P+ + +NTLI LC G V +A + + PN ++++ LI
Sbjct: 1102 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 1161
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
+C L+ A LL + G PDVVT ++ L G+V +A+ + E+
Sbjct: 1162 GFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREK-------- 1213
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
M + P+V+ YN+LIS C+ +L +A ++ +M + + Y
Sbjct: 1214 -----------MTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1262
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
TLI G + D KI + ME +G I N+++ G + EA+ + M
Sbjct: 1263 TLIDGFIRSENLGDARKIFEFME--HKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 1320
Query: 336 KL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
K+ P + I G+ GN+ A R MI+ PNVV Y LI+ YC+
Sbjct: 1321 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 1380
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
A L M P T+ ++ L ++ V
Sbjct: 1381 SAEGLFANMQAEALSPNVVTYTILIGSLFKKDKV 1414
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 185/455 (40%), Gaps = 41/455 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ I+ +VI L R + + P + FN+++ L E + A F
Sbjct: 1081 PNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHF 1140
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ + + + +Y L+ G C+ + LL M RG P+ V + LIH L
Sbjct: 1141 LREAIRRE-LNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLV 1199
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GKV A + M E P+ +++LI CK+ L A +LE+ PD
Sbjct: 1200 VAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEF 1259
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL-------GKVKGGCRF---------LKEM 227
+++ + DA +I E +G +KG C+F + M
Sbjct: 1260 VYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNM 1319
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ GC+P+ TY +IS Y + G L+ AL DM N VTY +LI G C G
Sbjct: 1320 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDT 1379
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D + M+ E + Y ++ L+++++ A Y + M P V
Sbjct: 1380 DSAEGLFANMQ--AEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLH 1437
Query: 346 LKILGF-----CVDGNV---------EDAKR-CFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+ G CV ++ +DA F +++ + G P Y+ +I + C+
Sbjct: 1438 YLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHN 1497
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+REA + M GY+P TF ++L G C G
Sbjct: 1498 MLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 1532
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 134/306 (43%), Gaps = 43/306 (14%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK-------------------I 264
L+ M G P L+++Y + G+L A ++ ++ +
Sbjct: 895 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLV 954
Query: 265 DGISWNFVT--YD---------------TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ W+ YD L+RGLC R+++GLK+++ + G
Sbjct: 955 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA--GCIPH 1012
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN ++ G R L L +ME P V I G++E F
Sbjct: 1013 VVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFL 1072
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M + G PNV IY+ +I A C +A ++K+M G P TFNT+++GLC +G
Sbjct: 1073 EMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEG 1132
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+V A + E +R R P Y+PLI C +G AS LLV+M+G+G PD +
Sbjct: 1133 HVRKAEHFLREAIR---RELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1189
Query: 486 TWNSLL 491
T+ +L+
Sbjct: 1190 TFGALI 1195
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D+ D M + G + L+ G + ++ + + + + GS ++
Sbjct: 888 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVRE-QYGSLPEVTHC 946
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIE 369
N +L L + + D+A + +M A + S +L G C++ VE+ + +
Sbjct: 947 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1006
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G +P+VV Y+ LI YC+ + L+ EM +G+LP T+ ++++ L ++G++
Sbjct: 1007 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEK 1066
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
L E MR RG P Y+ +I ALC A ++L QM G PD +T+N+
Sbjct: 1067 IGSLFLE-MRK--RGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNT 1123
Query: 490 LLICLSQQ 497
L+ L +
Sbjct: 1124 LITGLCHE 1131
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PDE + TVI G + +N ++ D++ R P++ ++S+++ K D D A
Sbjct: 1326 PDEFTYTTVISGYAKQGNLNGALRWLCDMIKR-KCKPNVVTYSSLINGYCKTGDTDSAEG 1384
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
+ M A + + TY IL+ L ++V M PN V + L
Sbjct: 1385 LF-ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1443
Query: 123 -------IHSLC--------KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL 167
I+S+C K+ + + L+ D+ +P + ++ +I + C+ L AL
Sbjct: 1444 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 1503
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+ G+VP+ +T +L CSVG+ ++ IL +Q
Sbjct: 1504 DFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQ 1547
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 215/473 (45%), Gaps = 36/473 (7%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ +N++L K+ A M + GV D TY +L+ LC +NR+ G+
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
LL M+ R + PN V YNTLI+ GKV A L+++M PN VTF+ LI +
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
E N AL + + G P V+ +L+ LC + +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC----------------KNAEFDLAR 388
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
G F M+R G TY +I C+ G LD A+ + N+M DGI + VTY LI
Sbjct: 389 G---FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G C GR +I+ + G I Y++++Y R EA+ + M E
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
++ + C G V +A+ M +G +PN V +DCLI+ Y +A
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH---YS 453
+ EMT G+ P T+ ++L GLC+ G++ A K ++ ++P + Y+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS------LHAVPAAVDTVMYN 617
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
L+ A+C+ G A L +MV + ILPD T+ SL+ L ++ ++ +L
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 222/509 (43%), Gaps = 32/509 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARA 66
P+E + T+I G + + + + F ++P+ FN+++D + E + +
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
FY M A G+ + +Y +L+ GLC MK GV + Y +I L
Sbjct: 356 FYM--MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 413
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKNG + A L+++M +P+ VT+S LI +CK A ++ + + G P+
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 473
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
+ + ++ C +G + +A+ I E +G + GKV F++
Sbjct: 474 IIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRC 533
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G LPN +++ LI+ Y +G A VF++M G F TY +L++GLC GG
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 593
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ + K L+ + + YN++L + + +A+ +M + P +
Sbjct: 594 LREAEKFLKSLHAVPAAVDTVM--YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 651
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I G C G A + G V PN V+Y C + + + + ++M
Sbjct: 652 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G+ P T N ++ G R G + L+ E G G P Y+ L+ ++
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE--MGNQNGG-PNLTTYNILLHGYSKRK 768
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLI 492
++ +L ++ GILPD LT +SL++
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVL 797
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 26/348 (7%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N + ILI Y +E + ++L + +GF P V T +L G V+
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL------GSVV------ 169
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+SGE + FLKEM ++ P+V T+NILI+ C G + + + M+
Sbjct: 170 -KSGEDVSVWS------FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 222
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + VTY+T++ C GR +++L M+ +G + YN +++ L R N+
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIA 280
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ L+ M K + P V + I GF +G V A + ++M+ G PN V ++ LI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ E +EA ++ M G P ++ +L GLC+ A MR
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY---MRMKRN 397
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G G Y+ +I LC+ G A +LL +M GI PD +T+++L+
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 213/483 (44%), Gaps = 71/483 (14%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G +TY L+KGLC + + K L + + ++V+YNTL+ ++CK+G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTI 185
+ +A SL +M + P+ T++ LI C++ V A++ +++ + G V P+ V
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
T ++ + G+ + E+ G R+GK++ L EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ PN+ TYNIL+ Y + + ++ ++ + ++GI + +T +L+ G+C ++
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 290 GLKILQL--------------MEDSKEGSKGRIS-------------------PYNSVLY 316
GLKIL+ M SK + G I+ ++++
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L R ++ E+ L +M K + P + I G C G+++ A ++MI P
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
V ++ A + + EA+ L++ M +P ++F T++ C+ GNV AL+L
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL- 986
Query: 435 EEDMRGIGRGSLPGSG------HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
R + G Y+ LI LC KG A L +M G G L + T+
Sbjct: 987 --------RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038
Query: 489 SLL 491
+L+
Sbjct: 1039 ALI 1041
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 225/552 (40%), Gaps = 85/552 (15%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTP-----SLKIFNSILDVLVKED 60
PD + +I G GR + ++V + R ++P S I+N +KE
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCR---IYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV--- 117
I + A M+ G D +T+ +L+ LC +V + + + M S G+ PN+V
Sbjct: 493 IRIYEA-----MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 118 --------------------------------IYNTLIHSLCKNGKVGRA----RSLMSD 141
Y +L+ LCK G + A +SL +
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607
Query: 142 MEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+ V ++ L+ A CK NL A+ L + +PD T T ++ LC G+ + A
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 667
Query: 202 VEILEESGEQG-----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +E+ +G + G+ K G F ++M+ G P++ T N +I
Sbjct: 668 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 727
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y G ++ D+ +M N TY+ L+ G R D L G
Sbjct: 728 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFLLYRSIILNGI 785
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDR---SLKILGFCVDGNVED 359
+S++ G+ N + L+ LK R VDR ++ I C +G +
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKA---FICRGVEVDRYTFNMLISKCCANGEINW 842
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M G + D ++ + R +E+ ++ EM+ G P + + +++
Sbjct: 843 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLCR G++ TA +V+E+M I P + S +++AL + G A++LL M+
Sbjct: 903 GLCRVGDIKTAF-VVKEEM--IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 959
Query: 480 ILPDYLTWNSLL 491
++P ++ +L+
Sbjct: 960 LVPTIASFTTLM 971
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 223/474 (47%), Gaps = 39/474 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ +VVK V TP LK + D + +D+ ++M D ++ I
Sbjct: 110 LGNVVKKGFRVEAITFTPLLKGLCA--DKRTSDAMDIVL----RRMTELSCMPDVFSCTI 163
Query: 87 LMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
L+KGLC NR + +LLH+M + G P+ V Y T+I+ K G +A S +M
Sbjct: 164 LLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEML 223
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ VT+S +I A CK + + A+ +L G +P+ +T +L CS +
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPK 283
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+ FLK+M G P+V TYN L+ C+ G A +F
Sbjct: 284 EAIG-------------------FLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ + TY TL++G + G + + +L LM + G +N ++
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM--VRNGIHPDHHVFNILICAYA 382
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
++ + DEA+ +M + L P V I C G+V+DA F+QMI+EG PN++
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y LIH+ C ++ +A EL+ EM G FN+++ C++G V + KL +
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G P YS LI C G A+ LL M G+ PD +T+N+L+
Sbjct: 503 VR---IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 205/438 (46%), Gaps = 32/438 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + + T+++G + ++ DL+ R + P +FN ++ K E +D A
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ + TY ++ LC + V D M G+ PN ++Y +LIHSLC
Sbjct: 394 F-SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLC 452
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A L+ +M + N + F+ +I ++CKE ++ + L + G P+V+
Sbjct: 453 IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI 512
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G++ +A + L M G P+ TYN LI
Sbjct: 513 TYSTLIDGYCLAGKMDEAT-------------------KLLSSMFSVGMKPDCVTYNTLI 553
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC +D AL +F +M G+S N +TY+ +++GL R ++ + +K G
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGI--TKSG 611
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
++ +S YN +L+GL + N DEAL + + + R+ I+ G ++AK
Sbjct: 612 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 671
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + G VP+V Y + ++ + E +L M +G + N+++ L
Sbjct: 672 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 731
Query: 422 CRQGNV---GTALKLVEE 436
++G++ GT L +++E
Sbjct: 732 LQRGDITRAGTYLSMIDE 749
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 165/378 (43%), Gaps = 27/378 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P T+ ILI C+ L L GF + +T T +L+ LC+ R DA++I
Sbjct: 85 PTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 205 -LEESGEQGRLGKV-------KGGCRFLKEMER------------KGCLPNVDTYNILIS 244
L E + V KG C + E G P+V +Y +I+
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVIN 204
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ + G D A +++M IS + VTY ++I LC G +D +++L M K G
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTM--VKNGV 262
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YNS+L+G Q EA+ +LK+M + + P V + + C +G +A++
Sbjct: 263 MPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARK 322
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD M + G P++ Y L+ Y + + E L+ M +G P FN ++
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+Q V A+ LV MR G P Y +I LC+ G A + QM+ +G+ P
Sbjct: 383 KQEKVDEAM-LVFSKMRQHGLN--PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439
Query: 483 DYLTWNSLLICLSQQTTW 500
+ + + SL+ L W
Sbjct: 440 NIIVYTSLIHSLCIFDKW 457
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 142/355 (40%), Gaps = 60/355 (16%)
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKE---------------MERKGC---LPNVDTYNI 241
DA + EE +GR + G R L + M R G P V TY I
Sbjct: 33 DARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYGI 92
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD------------ 289
LI C G LD ++ G +T+ L++GLC+ R D
Sbjct: 93 LIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTEL 152
Query: 290 ------------------------GLKILQLMEDSK-EGSKGRISPYNSVLYGLYRENQQ 324
L++L +M D + GS + Y +V+ G ++E
Sbjct: 153 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDS 212
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D+A +M ++ P V S I C ++ A M++ G +PN + Y+ +
Sbjct: 213 DKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI 272
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+H YC E+ +EA +K+M G P T+N+++ LC+ G A K+ + +
Sbjct: 273 LHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK--- 329
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
RG P Y L++ KG LL MV GI PD+ +N L+ ++Q
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 229/506 (45%), Gaps = 30/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P E+ ++ GL + I+ + RF P+L ++N++++ L K ED+D A
Sbjct: 321 PTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELL 380
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y K M + + +D TY+IL+ C + M G++ YN+LI+ C
Sbjct: 381 Y-KNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHC 439
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A L + M EP TF+ LI YCK+ + A L + P V
Sbjct: 440 KFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVY 499
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEM 227
T T ++ LCS + +A ++ +E E+ ++G C+ L++M
Sbjct: 500 TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDM 559
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G +P+ TY LIS C TG + +A D +D+ + N + Y L+ G C GR+
Sbjct: 560 LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRL 619
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ L E + G + + ++ G ++ LK+M + L P +V +
Sbjct: 620 TEALS--ASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYT 677
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I + +G+ + + C D M+ E PNVV Y ++ C+ + A L ++M
Sbjct: 678 SMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTA 737
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P + T+ L L ++GN+ A L E ++G+ L + Y+ LI+ C+ G
Sbjct: 738 NISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLKGL----LANTATYNILIRGFCKLGRL 793
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A+ +L +M GI PD +T+++++
Sbjct: 794 IEATKVLSEMTENGIFPDCITYSTII 819
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 128/508 (25%), Positives = 235/508 (46%), Gaps = 36/508 (7%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVL--VKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
D V L+ + P ++ ++IL+ L +++ I + F + + +GV+ D YT +
Sbjct: 166 DAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF--DESVNAGVKPDPYTCSA 223
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP- 145
+++ LC + + M+S + V YN LIH LCK G V A + + E
Sbjct: 224 VIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKG 283
Query: 146 ---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+ VT+ L+ +C+ + + + L+ + GFVP ++ +++ L G + A
Sbjct: 284 LKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAY 343
Query: 203 EILEESGEQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSY 246
+++ + G G L + C+ K M N TY+ILI S+
Sbjct: 344 DLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSF 403
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G+LD A F M DGI Y++LI G C G + + M + EG +
Sbjct: 404 CKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMIN--EGLEP 461
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ + +++ G ++ Q ++A + ++M +++ P + I G C + +A + F
Sbjct: 462 TATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLF 521
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M+E P V Y+ +I YC+ + +A EL+++M +G +P T+ ++SGLC
Sbjct: 522 DEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCST 581
Query: 425 GNVGTALKLVEEDMRGIGRGSLP-GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G V A +++ + + +L YS L+ C +G A +M+ +GI D
Sbjct: 582 GRVSAAKDFIDD----LHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMD 637
Query: 484 YLTWNSLLI--CLSQQTTWLLLLLLNEM 509
L +++LI + QQ L LL +M
Sbjct: 638 -LVCHAVLIDGAMKQQDMKRLFGLLKKM 664
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 201/486 (41%), Gaps = 72/486 (14%)
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
D LA F+ + + ++AIL+ L LLH + RG P V
Sbjct: 74 HDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVF 133
Query: 119 YNTL-IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L H CK + F L+ +Y + + +A+V+L
Sbjct: 134 EKFLESHKQCKFSST---------------LGFDFLVHSYLQNTRVFDAVVVLRLMLGNT 178
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------------RLGKVKGGCRFL 224
+P+V T++ +L L + + + E+ +ES G L ++K CR
Sbjct: 179 LLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAK 238
Query: 225 KE---MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
++ ME ++ TYN+LI C+ G + AL+V ++ G+ + VTY TL+ G
Sbjct: 239 EKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGF 298
Query: 282 CSGGRIDDGLKILQLM--------EDSKEG------SKGRISP----------------- 310
C + DDG+ ++ M E + G KG I
Sbjct: 299 CRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNL 358
Query: 311 --YNSVLYGLYRENQQDEALEYLKQMEKL-FP-RAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN+++ L + D+A K M + P V S+ I FC G ++ A+ F +
Sbjct: 359 FVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGR 418
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MIE+G + Y+ LI+ +C+ + A L +M G P A+TF T++SG C+
Sbjct: 419 MIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQ 478
Query: 427 VGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
V A KL E + + I P ++ LI LC AS L +MV + I P +
Sbjct: 479 VEKAFKLYREMNEKEIA----PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEV 534
Query: 486 TWNSLL 491
T+N ++
Sbjct: 535 TYNVMI 540
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 182/446 (40%), Gaps = 81/446 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P F +I GL + + K D + + P+ +N +++ K ++ +AF
Sbjct: 496 PSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAH-NMDKAFE 554
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ +G+ D YTY L+ GLC T RV + + + +K N + Y+ L+H C
Sbjct: 555 LLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYC 614
Query: 128 KNGKVGRARSLMSDMEE---------------------------------------PNDV 148
G++ A S +M + P+ V
Sbjct: 615 GQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSV 674
Query: 149 TFSILICAYCKEENLVNA-----LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
++ +I AY KE + + L++ EK F P+VVT T + LC VG + A
Sbjct: 675 IYTSMIDAYSKEGSFKKSGECLDLMVTEKCF-----PNVVTYTAFMNGLCKVGEIDRAGH 729
Query: 204 ILEESGEQG-RLGKVKGGCRFLKEMER---------------KGCLPNVDTYNILISSYC 247
+ E+ V GC FL + + KG L N TYNILI +C
Sbjct: 730 LFEKMLTANISPNSVTYGC-FLDSLTKEGNMKEATDLHHEMLKGLLANTATYNILIRGFC 788
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G L A V ++M +GI + +TY T+I C G + +++ M ++G +
Sbjct: 789 KLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTM--LRKGVEPD 846
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV----DRSLKILGF-----CVDGN 356
+N ++YG D+A E M L PR + R L + F CV G
Sbjct: 847 SVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGE 906
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCL 382
V+ A R + M+ ++ ++ CL
Sbjct: 907 VDTALRLYHSMLTRAVKLSLEMWKCL 932
>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
Length = 649
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 212/434 (48%), Gaps = 33/434 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK----VGRARSL 138
TY L+ G C + R+ D +L+ M V P++ YNT++ LC K +
Sbjct: 160 TYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEM 216
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ + PN+VTF+ I ++C+ L A+ LL++ +G PDVV + ++ G V
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276
Query: 199 MDAVEILE----ESGEQGRLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISS 245
A+++L + +KG C + EM RKGC PN T+++LISS
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ ++DSA++V M+ G + V Y+ +I L GR+DD L++L M K +
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV-CKPDAL 395
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
G +N+VL G R + +A E + QM + ++ + IL C +G V A +
Sbjct: 396 G----FNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQV 451
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F+QM P++V Y L++ + ++ V A +L + M P ++N VL GLCR
Sbjct: 452 FEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCR 508
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
A +L+ E +G+ P ++ LI +LC+KG A +L QM G PD
Sbjct: 509 AARWEDAGELIAE---MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPD 565
Query: 484 YLTWNSLLICLSQQ 497
T+N+L+ S+Q
Sbjct: 566 IFTYNALINGFSEQ 579
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 211/443 (47%), Gaps = 43/443 (9%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLA 64
+ PP+E F T IR + +++ V+ D + R+ TP + I++++++ ++ +D A
Sbjct: 220 RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQA 279
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + + Y +KGLC+ R D +L+ M +G PN ++ LI
Sbjct: 280 LDLLNTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLIS 335
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLC+N V A ++ ME EP+ V ++I+I + + + +AL LL S P
Sbjct: 336 SLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLN---SMVCKP 392
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD-TY 239
D + VL+ C R DA E+ + +M R C P ++ T+
Sbjct: 393 DALGFNAVLKGFCRAERWHDASEL-------------------IAQMFRDDC-PLIEMTF 432
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
NILI C+ G+++ A VF M + + VTY +L+ G G ++ +++ + M
Sbjct: 433 NILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP- 491
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
K I YN+VL GL R + ++A E + +M + P V ++ I C G V
Sbjct: 492 ----CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLV 547
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A +QM G P++ Y+ LI+ + ++ R+ +A +L+ M+ P A ++N+
Sbjct: 548 DRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNST 604
Query: 418 LSGLCRQGNVGTALKLVEEDMRG 440
L GLCR A +LV E +R
Sbjct: 605 LKGLCRAERWQDAEELVAEMLRN 627
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 213/463 (46%), Gaps = 64/463 (13%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
IL+K LC T R+ D ++L +K+ ++V +NTL+ C++G++ A ++
Sbjct: 95 ILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGAARAT 153
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM--- 199
N VT++ LI YC+ L +AL L+ S PD T VL+ LC +
Sbjct: 154 GAANVVTYTALIDGYCRSGRLDDALRLIA---SMPVAPDTYTYNTVLKGLCIAKKWEEAE 210
Query: 200 -------------DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+ V + + G + + L +M R GC P+V Y+ LI+ +
Sbjct: 211 ELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGF 270
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-EDSKEGSK 305
E G +D ALD+ N M N V Y+ ++GLC R +D I +LM E ++G
Sbjct: 271 SEQGHVDQALDLLNTMLCKP---NTVCYNAALKGLCIAERWED---IGELMAEMVRKGCS 324
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRC 363
+ ++ ++ L + N D A+E L+QMEK P V+ ++ I G V+DA R
Sbjct: 325 PNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRL 384
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ M+ + P+ + ++ ++ +C+ ER +ASEL+ +M I TFN ++ LC+
Sbjct: 385 LNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQ 441
Query: 424 QGNVGTALKLVEEDMR---------------GIGRGSL--------------PGSGHYSP 454
G V A ++ E+ R G L P Y+
Sbjct: 442 NGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIFSYNA 501
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++K LC ++ A L+ +MVGK P+ +T+N L+ L Q+
Sbjct: 502 VLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQK 544
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 137/279 (49%), Gaps = 21/279 (7%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
++N L++ YC G L A V + G + N VTY LI G C GR+DD L+++ M
Sbjct: 126 SHNTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASM 184
Query: 298 EDSKEGSKGRISPYNSVLYGL--YRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG 355
+ + YN+VL GL ++ ++ E L + P V + +I FC +G
Sbjct: 185 PVAPDTYT-----YNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNG 239
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
++ A + DQM G P+VVIY LI+ + ++ V +A +L+ M P +N
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYN 296
Query: 416 TVLSGLC---RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
L GLC R ++G +L+ E +R +G P +S LI +LC+ SA +L
Sbjct: 297 AALKGLCIAERWEDIG---ELMAEMVR---KGCSPNEATFSMLISSLCQNNLVDSAVEVL 350
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMV 510
QM G PD + +N ++ LS++ L LLN MV
Sbjct: 351 EQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV 389
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 25/294 (8%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R G++ R L G NV TY LI YC +G LD AL + M + ++
Sbjct: 136 RDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTY--- 191
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ----DEAL 328
TY+T+++GLC K + E E + R P R Q D A+
Sbjct: 192 TYNTVLKGLCIAK------KWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 245
Query: 329 EYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ L QM + P V S I GF G+V+ A + M+ + PN V Y+ +
Sbjct: 246 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGL 302
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C ER + ELM EM G P +TF+ ++S LC+ V +A++++E+ + G
Sbjct: 303 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK---YGCE 359
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
P + +Y+ +I +L E+G A LL MV K PD L +N++L + W
Sbjct: 360 PDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERW 410
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+E F +I L + +++ ++ + + + TP + +N++++ E L A
Sbjct: 528 PPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF-SEQGRLDDAL 586
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K + + D +Y +KGLC R D +L+ M PN V + H L
Sbjct: 587 --KLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLM 644
Query: 128 KN 129
N
Sbjct: 645 PN 646
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 191/417 (45%), Gaps = 29/417 (6%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDVTFSILICAYCKEENL 163
M G+ PN+++YN LI LCK G + A S + M + PN V+++I+I YCK N+
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNI 60
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
AL L + G P + +++ C G V A+++ E +G
Sbjct: 61 EKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVL 120
Query: 213 -----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
R K+ + M +GC P+V TYN +I+ C+ LD A+ + MK + +
Sbjct: 121 LSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDV 180
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG-LYRENQQDE 326
S FVTY TLI LC R+ ++ + M EG P SVL+ L R + E
Sbjct: 181 SPTFVTYTTLIDHLCKFTRLQQAYEVFEKM---AEGPCACTEPAYSVLFNKLQRAGKLVE 237
Query: 327 ALEYLKQMEKLFPRAVDR--SLKILGFC-VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A M + D SL +LG +DG +A + +M+ + P+ Y LI
Sbjct: 238 ASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILI 297
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ C+ R EA E+ +EM G G P T+NT+L GL + A++L + +
Sbjct: 298 NGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT---YFMLDQ 354
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
G LP + Y+ +I+ C G A L M+ GI+ + T+N +++ + W
Sbjct: 355 GRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAW 411
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/525 (26%), Positives = 231/525 (44%), Gaps = 36/525 (6%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE- 59
MP P+ + +I G +AR I + + P+ ++SI+ K
Sbjct: 36 MPQ--HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTG 93
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++ A + +M A G + D + +L+ GL ++ + +L M SRG KP+ V Y
Sbjct: 94 NVSKAMDVF-AEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTY 152
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NT+I LCK K+ A L+ M++ P VT++ LI CK L A + EK
Sbjct: 153 NTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAE 212
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------------RLGKVKGG-- 220
+ + L G++++A + + + L K+ GG
Sbjct: 213 GPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNV 272
Query: 221 --CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ + EM K P+ Y+ILI+ C+ A ++F +M+ GIS VTY+TL+
Sbjct: 273 EAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLL 332
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GL S ++ D +++ M D +G YN ++ G +EA + M K
Sbjct: 333 EGLLSTAKLQDAMELTYFMLD--QGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDG 390
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI----EEGGVPNVVIYDCLIHAYCQEERV 392
+ + I+GF D A F +M ++ PN+ Y+ LI + C+ ++V
Sbjct: 391 IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQV 450
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
EA +L+ M G++P + +LS L R G + A +L +E M I L GS +
Sbjct: 451 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKE-MSRINCQQLVGSSNI 509
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ + +G A L QM GI+PD T++ L++ L Q
Sbjct: 510 --LLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQ 552
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 150/642 (23%), Positives = 254/642 (39%), Gaps = 142/642 (22%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF--NMTPSLKIFNSILDVLVK-EDIDLAR 65
P+ ++ +I L +A M+ +A + R + P++ +N I+D K +I+ A
Sbjct: 8 PNAILYNNLISCLCKAGML---AEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKAL 64
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
AF R+ M G + Y+ +++ C T V + M ++G +P+ V +N L+
Sbjct: 65 AFLRE-MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSG 123
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L + K+ AR L M +P+ VT++ +I CK + L A+ LLE+ P
Sbjct: 124 LWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 183
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGE-------------------QGRL-------- 214
VT T +++ LC R+ A E+ E+ E G+L
Sbjct: 184 FVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYS 243
Query: 215 ---------------------GKVKGG----CRFLKEMERKGCLPNVDTYNILISSYCET 249
K+ GG + + EM K P+ Y+ILI+ C+
Sbjct: 244 DMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKA 303
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS--------- 300
A ++F +M+ GIS VTY+TL+ GL S ++ D +++ M D
Sbjct: 304 RRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSY 363
Query: 301 ------------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
K+G YN ++ G ++ A K+M+
Sbjct: 364 NLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQS 423
Query: 337 ------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
P + I C VE+A + M ++G VP++ I++ L+ +
Sbjct: 424 GKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAG 483
Query: 391 R-----------------------------------VREASELMKEMTGHGYLPIASTFN 415
R V EA + +K+MT G +P T++
Sbjct: 484 RLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYD 543
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ GLC QG A KLVEE +R G P + L+ ALC +G FQ A +
Sbjct: 544 KLVVGLCWQGKADQARKLVEELVRD---GKRPENQGLRQLLGALCAQGDFQGAYEFYCWL 600
Query: 476 VGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMV 515
G+ N+L+ CL+++ +L ++ E V V+V
Sbjct: 601 PSVGVEVTLGMHNTLVTSCCLARKLDYLDMIEQREGVPDVIV 642
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/514 (24%), Positives = 240/514 (46%), Gaps = 66/514 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P + ++ GL +A +++ + + + +P+LK + ++D L K ++ AR
Sbjct: 109 PTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK----SRGVKPNSVIYNTLI 123
+ M+ +G + D + Y L+ GL ++ + L+ M +RGV+P+ VI+N +I
Sbjct: 169 F-VDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVI 227
Query: 124 HSLCKNGKVGRARSLMSDMEEPNDVT---FSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC +G + A + ++++ D+T F+ L+ A CK E A+ ++K P
Sbjct: 228 RQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFP 287
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ T T +++ +GR+ +A+ L+E+ E+G +LG+V+ GC
Sbjct: 288 TLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERF 347
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM +G P+ TY LI + + ++ A V+ M G + VTY+ ++ GLC
Sbjct: 348 HEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKA 407
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR+ + ME+ G + Y++++ G
Sbjct: 408 GRVAEAYATFLAMEE--RGCVATVVTYSALMDG--------------------------- 438
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
FC +GNV A F +M++ G PN+V Y+ +I C+ ++ +A +++
Sbjct: 439 ------FCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQ 492
Query: 405 HGYLPIASTFNTVLSGLC-RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
P TFN+ L GLC R VG ++L E + +G+ P YS L+ +C G
Sbjct: 493 RRLCPDVYTFNSFLHGLCQRLDTVGDGVELFES---MVSQGTSPNLHSYSILMDGICRAG 549
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
G + + +MV +G+ PD + +N+L+ +C++
Sbjct: 550 GLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIA 583
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 187/384 (48%), Gaps = 32/384 (8%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKS 173
++ + L++ LCK G++ RA L+ +M P+ V F+++I C+E+ L A +LE++
Sbjct: 8 DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERA 67
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G PD VT ++ LC RV DA ++ LK+M+ K CL
Sbjct: 68 VRAGCEPDYVTYNVFIDGLCKAERVDDAFQL-------------------LKKMDEKKCL 108
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P TY L+ + G LD A+ + M G S TY +I GL GR+++ +I
Sbjct: 109 PTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRI 168
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK------LFPRAVDRSLK 347
M + G + Y +++ GL + + DEAL YL QM + + P V +L
Sbjct: 169 FVDMLGN--GCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLV 226
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I C GN+EDA FD++ + + + ++ L+ A C+ ER EA +K+M+
Sbjct: 227 IRQLCASGNLEDALAYFDELDDSLDLTHFT-FNPLVAALCKAERTEEAIAFVKKMSERRC 285
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+ +++ G + G + AL ++E + RG +P + Y+ +I LC+ G +
Sbjct: 286 FPTLFTYTSLVDGFLKLGRLDEALLQLKE---AVERGFIPDAVTYTSIIDGLCKLGRVEE 342
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
+M +G PD +T+ +L+
Sbjct: 343 GCERFHEMRNRGYEPDAVTYAALI 366
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 155/348 (44%), Gaps = 29/348 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + ++I GL + + + + + P + +++D +K I A
Sbjct: 322 PDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRV 381
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR+ M+ SG TY I++ GLC RV + + M+ RG V Y+ L+ C
Sbjct: 382 YRQ-MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 440
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G V A L M EPN V+++I+I C+ L A EK PDV
Sbjct: 441 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 500
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T L LC RL V G + M +G PN+ +Y+IL+
Sbjct: 501 TFNSFLHGLCQ------------------RLDTVGDGVELFESMVSQGTSPNLHSYSILM 542
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C G L+ L++F++M G++ + V ++TLIR LC GR+D+ L++ + +E
Sbjct: 543 DGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELE---RR 599
Query: 304 SKGRISPYNSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDRSLKIL 349
S Y S+L L R + +EA L + +++ PR D +++ L
Sbjct: 600 SAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPRHYDLTVRFL 647
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 210/456 (46%), Gaps = 59/456 (12%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV-GRARSLMSDME----EPN 146
C + D + M R P + + L+ ++ K G+ SL ME PN
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
T SILI + + + A +L K G P +VT T ++ LC VG+ A+E+ +
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192
Query: 207 ESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ +G ++G+ LK+ME GC PNV TY+ +I S+ +
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG------LKILQLMED----- 299
++ ALD+F+ MK+ GIS + TY++LI+GLC+ + + ++ L +M D
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312
Query: 300 ----------------------SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
++ G + + Y+S++YG ++ EA + M +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P ++ I G+C +++AK+ F++MI +G PN V Y+ LIH CQ +REA
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L K M +G LP T++ +L G C+QG G A +L + P Y+ L
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSK---PNLVMYNIL 489
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I A+C+ G + A L ++ KG+ P+ + +++
Sbjct: 490 IDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 201/414 (48%), Gaps = 29/414 (7%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
D+V+R P + + +I++ L K A A KKM +G Q + TY+ ++
Sbjct: 193 DMVAR-GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
RV + + MK +G+ P+ YN+LI LC + A +L+++M P+ VTF
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
++L+ CKE + A +L+ G PDVVT + ++ V++A ++ +
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFD---- 367
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M KGC P+V +YNILI+ YC+ +D A +FN+M G++ N
Sbjct: 368 ---------------AMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPN 412
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
V+Y+TLI GLC G + + + + M + G+ + Y+ +L G ++ +A
Sbjct: 413 NVSYNTLIHGLCQLGSLREARNLFKNMHTN--GNLPNLFTYSILLDGFCKQGYFGKAFRL 470
Query: 331 LKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+ M+ + P V ++ I C GN+ DA++ F ++ +G PN IY +I+ C+
Sbjct: 471 FRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCK 530
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
E + EA E + M G P ++N ++ G + A++L+ E MR G
Sbjct: 531 EGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGE-MRDKG 583
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 213/482 (44%), Gaps = 41/482 (8%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRK 70
SI I L R + V+ + + + P++ F ++++ L K A+A
Sbjct: 137 SILINCFSHLQRVDLAFSVLAK---IIKLGLQPTIVTFTTLINWLCKVG-KFAQAMELFD 192
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
M+A G + D YTY ++ GLC LL M+ G +PN V Y+T+I S K+
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A + S M+ P+ T++ LI C A LL + S +PD+VT
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ +C G+V +A QG LK M G P+V TY+ L+ Y
Sbjct: 313 VLVDTICKEGKVSEA---------QG----------VLKTMTEMGVEPDVVTYSSLMYGY 353
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ A +F+ M G + +Y+ LI G C RID+ ++ M +G
Sbjct: 354 SLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEM--IHQGLTP 411
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCF 364
YN++++GL + EA K M P S+ + GFC G A R F
Sbjct: 412 NNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLF 471
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
M PN+V+Y+ LI A C+ +R+A +L E+ G P A + T+++GLC++
Sbjct: 472 RAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKE 531
Query: 425 GNVGTALKL---VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
G + AL+ +EED G P Y+ +I+ A L+ +M KG +
Sbjct: 532 GLLDEALEAFRNMEED------GCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585
Query: 482 PD 483
D
Sbjct: 586 AD 587
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 190/414 (45%), Gaps = 43/414 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDV-----LVKED 60
PD + T+I GL + I + A L+ + P++ +++I+D V E
Sbjct: 201 PDVYTYTTIINGLCK---IGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+D+ M G+ D +TY L++GLC ++ + LL+ M+S + P+ V +N
Sbjct: 258 LDIF-----SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
L+ ++CK GKV A+ ++ M E P+ VT+S L+ Y +V A L + +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PDV + ++ C V R+ +A ++ E M +G PN
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNE-------------------MIHQGLTPNN 413
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
+YN LI C+ G L A ++F +M +G N TY L+ G C G ++ +
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M+ + SK + YN ++ + + +A + ++ + L P A + I G C +
Sbjct: 474 MQSTY--SKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKE 531
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G +++A F M E+G P+ + Y+ +I + + A +L+ EM G++
Sbjct: 532 GLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 25/283 (8%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-DVLVKEDID 62
S+ PD F ++ + + +++ ++ + P + ++S++ ++ ++
Sbjct: 301 SLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVV 360
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
AR + M+ G + D ++Y IL+ G C R+ + +L + M +G+ PN+V YNTL
Sbjct: 361 EARKLF-DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
IH LC+ G + AR+L +M PN T+SIL+ +CK+ A L S
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P++V +++ +C G + DA ++ E+ KG PN
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFS-------------------ELFVKGLQPNAQI 520
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
Y +I+ C+ G+LD AL+ F +M+ DG + ++Y+ +IRG
Sbjct: 521 YTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGF 563
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 101/238 (42%), Gaps = 15/238 (6%)
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ-DEALEYLKQME--KLF 338
CS IDD L M K I + +L + + Q D + KQME L
Sbjct: 73 CSFRNIDDALASFNHMLHRKPLPC--IIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLS 130
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P S+ I F V+ A ++I+ G P +V + LI+ C+ + +A EL
Sbjct: 131 PNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMEL 190
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPL 455
+M G P T+ T+++GLC+ G A LK +EE G P YS +
Sbjct: 191 FDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE------AGCQPNVVTYSTI 244
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVSF 512
I + + A + M KGI PD T+NSL+ L + W LLNEM S
Sbjct: 245 IDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 232/513 (45%), Gaps = 35/513 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL--VKEDIDLA 64
+PP + V+ G RAR + + R + N++L L K D
Sbjct: 4 APPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAV 63
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM-KSRGV-KPNSVIYNTL 122
+ R+ M G D ++YAI++K LC NR LL +M K GV P+ V YNT+
Sbjct: 64 KVLLRR-MTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
IH K GK+G+A +L +M + P+ VT + +I A CK + NA +LL + G
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
P+ VT T ++ ++GR +A ++ E +G + G+ K
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
M KG PN+ TY IL+ Y G + FN MK DGI N + + LI
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
G +D+ + IL M+ +G + Y++++ L R + +A++ QM + P
Sbjct: 303 KRGMMDEAMLILSEMQG--QGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPN 360
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEG-GVPNVVIYDCLIHAYCQEERVREASELM 399
V I GFC G++ AK +M+ G PN+ ++ ++H+ C+E RV +A +
Sbjct: 361 TVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKA 458
+ G FNT++ G C G +G A +++ + GIG P + Y+ L+
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIG----PDTFTYNTLVNG 476
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G L +M K I P +T+N +L
Sbjct: 477 YFKSGRIDDGLNLFREMSDKKIKPTTVTYNIIL 509
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 223/491 (45%), Gaps = 33/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + TVI G + I + + P + NSI++ L K +D A
Sbjct: 114 PDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELL 173
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ M+ +GV + TY ++ G R + K+ M RG+ P+ V +N+ + SLC
Sbjct: 174 LRQ-MVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLC 232
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G+ A + M PN VT+ IL+ Y E + + G V + +
Sbjct: 233 KHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCL 292
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G + +A+ IL E M+ +G P+V TY+ LI
Sbjct: 293 VFTILIDAYAKRGMMDEAMLILSE-------------------MQGQGLSPDVFTYSTLI 333
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S+ C G L A+D FN M G+ N V Y +LI+G C+ G + +++ M ++
Sbjct: 334 SALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGI- 392
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAK 361
+ I+ +NS+++ + +E + +A ++ + R+ + + I G+C+ G + A
Sbjct: 393 PRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAF 452
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
D MI G P+ Y+ L++ Y + R+ + L +EM+ P T+N +L GL
Sbjct: 453 SVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGL 512
Query: 422 CRQGNVGTALKLVEEDMRGIGRG-SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
R G A K++ E M G G SLP Y+ ++K LC A ++ ++ +
Sbjct: 513 FRAGRTVAAQKMLHE-MIGCGTTVSLP---TYNIILKGLCRNNCTDEAIVMFQKLCTMNV 568
Query: 481 LPDYLTWNSLL 491
+ T N+++
Sbjct: 569 KFNITTLNTMI 579
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 214/498 (42%), Gaps = 32/498 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE--DIDLAR 65
PP++ + ++I G + K ++ + P + +NS +D L K + A
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
FY M A G + + TY IL+ G D + MK G+ N +++ LI +
Sbjct: 243 IFY--SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDA 300
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K G + A ++S+M+ P+ T+S LI A C+ L +A+ + G P+
Sbjct: 301 YAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPN 360
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFL 224
V +++ C+ G ++ A E++ E G + G+V
Sbjct: 361 TVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
++ G ++ +N LI YC G + A V + M GI + TY+TL+ G
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GRIDDGL + + M D K K YN +L GL+R + A + L +M
Sbjct: 481 GRIDDGLNLFREMSDKK--IKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLP 538
Query: 345 SLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I+ G C + ++A F ++ N+ + +I++ +R EA +L +
Sbjct: 539 TYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAI 598
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+ G +P AST+ ++ L ++G+V A + + G P S + I+ L EK
Sbjct: 599 SDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKS---GCAPCSRLLNDTIRTLLEK 655
Query: 463 GGFQSASMLLVQMVGKGI 480
G A + ++ GK I
Sbjct: 656 GEIVKAGNYMSKVDGKSI 673
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 150/386 (38%), Gaps = 87/386 (22%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P T+ +++ C+ L + G D VL+ LC R DAV++
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L L+ M GC+P+ +Y I++
Sbjct: 66 L------------------LRRMTELGCVPDAFSYAIVL--------------------- 86
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
+ LC R L +L++M + + YN+V++G ++E +
Sbjct: 87 --------------KRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKI 132
Query: 325 DEALE-YLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+A Y + M++ F P V + I C V++A+ QM++ G PN V Y +
Sbjct: 133 GKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSM 192
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE------ 436
IH Y R EA+++ +EMTG G +P ++N+ + LC+ G A ++
Sbjct: 193 IHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGH 252
Query: 437 ---------------------DMRGI-----GRGSLPGSGHYSPLIKALCEKGGFQSASM 470
DM G G + ++ LI A ++G A +
Sbjct: 253 RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAML 312
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQ 496
+L +M G+G+ PD T+++L+ L +
Sbjct: 313 ILSEMQGQGLSPDVFTYSTLISALCR 338
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 232/507 (45%), Gaps = 33/507 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P F T+I L + + + + +++++P + + S IL ++DLA
Sbjct: 196 PSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGV 255
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G + TY+ L+ GLC RV + +L M +G++P Y I +LC
Sbjct: 256 F-DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
A L++ M++ PN T++ LI + L A+ L K G VP+ V
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTV 374
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEM 227
T ++ LC GR A++I G L +KG C ++M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LP V TYN LI+ Y G +++A + + MK +G + TY+ L+ G G++
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+ Q M + G Y +++ G ++ + D AL LK+ME++ P +
Sbjct: 495 ESASFYFQEMVEC--GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G + +A++ D+M+E+G +PNV+ Y LI C+ R + A ++ +M
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
LP T+++++ GLC++G A ++ E G P YS L+ LC KG F
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAERMSE-------IGCEPTLDTYSTLVSGLCRKGRF 665
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLI 492
A L+ M +G PD + SLLI
Sbjct: 666 YEAEQLVKDMKERGFCPDREIYYSLLI 692
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 235/503 (46%), Gaps = 38/503 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + I I +I+ I V + +S SL N++L L K E ++ AR
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y K+M+ SG+Q T+ L+ L +V + +L + + P+ Y +LI C
Sbjct: 186 Y-KQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHC 244
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+N + A + M +PN VT+S LI C E + AL +LE+ G P V
Sbjct: 245 RNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVY 304
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T + LC++ +A+E+ + M+++GC PNV TY LI
Sbjct: 305 TYTLPITALCAIEHEEEAIEL-------------------VARMKKRGCRPNVQTYTALI 345
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S G L+ A+ +++ M +G+ N VTY+ LI LC GGR LKI ME G
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG--HG 403
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
S YN ++ GL ++A+ ++M K+ P V + I G+ GNV +A
Sbjct: 404 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 463
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R D M E G P+ Y+ L+ + + ++ AS +EM G P ++ ++ G
Sbjct: 464 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH 523
Query: 422 CRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
+ G V AL L++ E+M G P Y+ +I L ++ F A + +MV +G
Sbjct: 524 SKDGKVDIALSLLKRMEEM-----GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 480 ILPDYLTWNSLL--ICLSQQTTW 500
+LP+ +T+ +L+ +C + +T +
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQF 601
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 241/539 (44%), Gaps = 64/539 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + ++I G R R ++ D + + P+ ++++++ L E +D A
Sbjct: 231 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 290
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ G++ YTY + + LC + +L+ MK RG +PN Y LI L
Sbjct: 291 L-EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ A L M + PN VT++ LI C AL + G + +
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T ++++ LC G + A+ + E+ + G L G V R L M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ GC P+ TYN L+S + + G L+SA F +M G++ N V+Y LI G G++
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D L +L+ ME+ G + YN+V+ GL +EN+ EA + +M + L P + +
Sbjct: 530 DIALSLLKRMEEM--GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYT 587
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C +G + A + F M + +PN+ Y LI+ CQE + EA E M E+
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA-ERMSEI--- 643
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR---------------------- 443
G P T++T++SGLCR+G A +LV+ DM+ G
Sbjct: 644 GCEPTLDTYSTLVSGLCRKGRFYEAEQLVK-DMKERGFCPDREIYYSLLIAHCKNLEVDH 702
Query: 444 -----GSLPGSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
S+ G Y LI ALC+ G + A L M+ K D + W L+
Sbjct: 703 ALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLV 761
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 173/390 (44%), Gaps = 33/390 (8%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
DI+ A + +KM+ G TY L+ G V + +LL +MK G +P+ Y
Sbjct: 423 DIEKAMVLF-EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTY 481
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N L+ K GK+ A +M E PN V+++ LI + K+ + AL LL++
Sbjct: 482 NELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
G P+V + V+ L R +A +I ++ EQG R G+ +
Sbjct: 542 MGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF 601
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ +ME++ CLPN+ TY+ LI C+ G D A M G TY TL+
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVS 657
Query: 280 GLCSGGRIDDGLKILQLMEDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GLC GR + QL++D KE G Y S+L + + D AL+ +E
Sbjct: 658 GLCRKGRFYEAE---QLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 714
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
++ R+L I C G VE+A+ FD M+E+ + +++ L+ +E +
Sbjct: 715 FQLHLSIYRAL-ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLC 773
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+L+ M + P T+ + L R G
Sbjct: 774 MKLLHIMESKNFTPNIQTYVILGRELSRIG 803
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 126/290 (43%), Gaps = 19/290 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I G + ++ + + P+++ +N++++ L KE+
Sbjct: 511 PNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ G+ + TY L+ GLC R FK+ H M+ R PN Y++LI+ LC+
Sbjct: 571 CDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 630
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GK A + EP T+S L+ C++ A L++ GF PD +
Sbjct: 631 EGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSL 690
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
L C V A++I +E KG ++ Y LI + C+
Sbjct: 691 LIAHCKNLEVDHALKIFH-------------------SIEAKGFQLHLSIYRALICALCK 731
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
G ++ A +F++M + + + + L+ GL G +D +K+L +ME
Sbjct: 732 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIME 781
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I GL + ++ + +S P+L +++++ L ++
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 671
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M G D Y L+ C V K+ H ++++G + + IY LI +LCK
Sbjct: 672 VKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCK 731
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V A++L +M E +++ +++L+ KE L + LL S F P++ T
Sbjct: 732 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 791
Query: 185 ITKVLELLCSVGRVMDA 201
+ L +G+ +++
Sbjct: 792 YVILGRELSRIGKSIES 808
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 231/514 (44%), Gaps = 32/514 (6%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P+SI P S T+I L +A+ + V+ ++ ++ P +++++ V
Sbjct: 53 PNSI---PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQK 109
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+M G + Y + +L+KG C + L +MK + P+ V YNT
Sbjct: 110 PSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNT 169
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I+ LCK ++ A+ L +M+ +PN VTFS LI +CK ++ LLE+ G
Sbjct: 170 VINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMG 229
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
DV + ++ CS G + E+ E + + K K
Sbjct: 230 LEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAA 289
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ L M P+V Y +L + G A+ V + M G N VTY+ +I GL
Sbjct: 290 QMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGL 349
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK-QMEKLF-- 338
C GR+DD L IL+ M +K+G K + Y++++ GL + DEA++ L M K F
Sbjct: 350 CKEGRVDDALGILETM--AKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHI 407
Query: 339 -PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P +L I C + AKR + M+E G N+V Y+ LI Y ++ +A E
Sbjct: 408 KPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALE 467
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L K+ G P A+T+ +++GLC+ + A L + G+ P Y+ L+
Sbjct: 468 LWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKR---ASGTRPTVSEYNTLMA 524
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+LC + + A L +M PD +++N ++
Sbjct: 525 SLCRESSVEQARNLFQEMRNANHDPDVVSFNIII 558
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 224/472 (47%), Gaps = 31/472 (6%)
Query: 29 DVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
D KA DL + R + P +N++++ L K + K+M + + T++
Sbjct: 144 DSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFS 203
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
L+ G C V +GF LL M+ G++ + +Y+ LI C G + R + L ++M
Sbjct: 204 ALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK 263
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN VT+S L+ A CK++ A +L+ PDVV T + + L GR DA
Sbjct: 264 NVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDA 323
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+++L+ M ++G PN TYN +I+ C+ G +D AL +
Sbjct: 324 IKVLDL-------------------MVKRGEEPNNVTYNAIINGLCKEGRVDDALGILET 364
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G + VTY TL++GLC G+ID+ + +L L+ + K + +N V+ L ++
Sbjct: 365 MAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQ 424
Query: 322 NQQDEALE-YLKQMEKLFP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ A Y +E+ FP V ++ I G+ G + A + ++ G PN Y
Sbjct: 425 RRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATY 484
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
LI+ C+ + + A L + G P S +NT+++ LCR+ +V A L +E MR
Sbjct: 485 TVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQE-MR 543
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P ++ +I + G +SA LL++M+ ++PD +T++ L+
Sbjct: 544 NANHD--PDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 224/494 (45%), Gaps = 75/494 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
PD + TVI GL + + + V+A +L P+ F++++D K D+
Sbjct: 162 PDCVSYNTVINGLCKGKRL---VEAKELFKEMKGGECKPNSVTFSALIDGFCKNG-DVEE 217
Query: 66 AF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
F ++M G++GD + Y+ L+ G C + G +L + M + V PN V Y+ L++
Sbjct: 218 GFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMN 277
Query: 125 SLCKNGKVGRARSLMSDM---------------------------------------EEP 145
+LCK K A ++ M EEP
Sbjct: 278 ALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEP 337
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N+VT++ +I CKE + +AL +LE G PDVVT + +++ LC VG++ +AV++L
Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Query: 206 ---------------------EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+E +Q RL K R M +G N+ TYNILI
Sbjct: 398 NLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAK---RVYYTMVERGFPSNIVTYNILID 454
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y G L AL+++ D GIS N TY LI GLC + + + G+
Sbjct: 455 GYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFN--KKRASGT 512
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKR 362
+ +S YN+++ L RE+ ++A ++M P V ++ I G G+VE AK
Sbjct: 513 RPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKE 572
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M+ VP+ + + LI+ + + ++ EA+ L + M G++P A F+++L G
Sbjct: 573 LLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYS 632
Query: 423 RQGNVGTALKLVEE 436
+G + ++++
Sbjct: 633 LKGKTEKVVSMLQQ 646
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 168/319 (52%), Gaps = 25/319 (7%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++G NV +N+L+ +C++G A+D+F MK + + + V+Y+T+I GLC G R+
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ ++ + M+ + K +++++ G + +E L++MEK L S
Sbjct: 182 EAKELFKEMKGGE--CKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSA 239
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I GFC G++E K F++M+ + PNVV Y CL++A C++++ +EA++++ MTG
Sbjct: 240 LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK 299
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P + + GL + G A+K+++ ++ RG P + Y+ +I LC++G
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVK---RGEEPNNVTYNAIINGLCKEGRVD 356
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL--IC----LSQQTTWLLLLLLNE------MVSFVM 514
A +L M KG PD +T+++L+ +C + + L LL+ E + +F +
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416
Query: 515 VVHELSAKEKRCKLRSLNH 533
V+ EL CK R L H
Sbjct: 417 VIQEL------CKQRRLRH 429
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 145/349 (41%), Gaps = 59/349 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + + GL + +D +K DL+ + P+ +N+I++ L KE +D A
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR--GVKPNSVIYNTLIHS 125
+ M G + D TY+ L+KGLC ++ + LL+++ S+ +KP+ +N +I
Sbjct: 362 L-ETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQE 420
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK ++ A+ + M E N VT++ILI Y L AL L + + G P+
Sbjct: 421 LCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPN 480
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
T T ++ LC + + A + + G R V+ +
Sbjct: 481 AATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQ 540
Query: 226 EMERKGCLPNVDTYNI-----------------------------------LISSYCETG 250
EM P+V ++NI LI+ + + G
Sbjct: 541 EMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLG 600
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
LD A ++ M G + V +D+L++G G+ + + +LQ M D
Sbjct: 601 QLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMAD 649
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 218/455 (47%), Gaps = 36/455 (7%)
Query: 37 VSRFNMTPSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
+ + P+ I N+++ L +K ++ + F+ K++A G Q D +Y IL+ GLC
Sbjct: 71 ILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFH-DKVVAQGFQMDQVSYGILLNGLCKIG 129
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
KLL ++ R +P+ V+Y+T+I LCK+ V A L S+M P+ +T++
Sbjct: 130 ETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYT 189
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LIC +C L+ A LL + P++ T +++ LC
Sbjct: 190 TLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLC------------------ 231
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ GKVK L M +KG P+V Y+IL+ YC G + A +F M G++ +
Sbjct: 232 -KEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDV 290
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+Y+ +I GLC G R+D+ + +L+ E + Y+S++ GL + + L+
Sbjct: 291 YSYNIIINGLCKGKRVDEAMNLLR--EMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLT 348
Query: 332 KQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
K+M A V + + G C + N++ A F +M E G PN Y LI C+
Sbjct: 349 KEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE--EDMRGIGRGSLP 447
R+++ L + + GY T+ ++SGLC++G AL + ED G +P
Sbjct: 409 GRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMED-----NGCIP 463
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ + +I++L EK A LL +M+ KG+LP
Sbjct: 464 NAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 205/452 (45%), Gaps = 61/452 (13%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P + F IL LVK K+M A G+ D T +IL+ C ++ F +
Sbjct: 8 PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCK 159
L + G +PN++I NTL+ LC G+V ++ +++ + + V++ IL+ CK
Sbjct: 68 LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
A+ LL PDVV + +++ LC V +A ++
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYS------------- 174
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
EM +G P+V TY LI +C G L A + N+M + I+ N TY+TLI
Sbjct: 175 ------EMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
LC G++ + +L +M +K+G K P
Sbjct: 229 TLCKEGKVKESKNLLAVM--TKKGVK---------------------------------P 253
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
V S+ + G+C+ G V+ AK+ F M++ G P+V Y+ +I+ C+ +RV EA L+
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+EM +P T+++++ GLC+ G + T L L +E RG Y+ L+ L
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHH---RGQPANLVTYNSLLDGL 370
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+ A L ++M +GI P+ T+ +L+
Sbjct: 371 CKNQNLDKAIALFMKMKERGIQPNKYTYTALI 402
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 190/421 (45%), Gaps = 57/421 (13%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
D+ + ++ GL + +K + + P + ++++I+D L K+ +D A Y
Sbjct: 114 DQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLY 173
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M A G+ D TY L+ G CL ++ + F LL+ M + + PN YNTLI +LCK
Sbjct: 174 -SEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCK 232
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV +++L++ M + P+ V +SIL+ YC + A + G PDV +
Sbjct: 233 EGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYS 292
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC RV +A+ +L E + +LG++ KEM
Sbjct: 293 YNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMH 352
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G N+ TYN L+ C+ LD A+ +F MK GI N TY LI GLC GGR+
Sbjct: 353 HRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLK 412
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
G + Q + +G + Y ++ GL +E DEAL +ME
Sbjct: 413 KGQALFQHL--LVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME------------- 457
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
+ G +PN V ++ +I + +++ +A +L+ EM G L
Sbjct: 458 --------------------DNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497
Query: 409 P 409
P
Sbjct: 498 P 498
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL + + +++ + + NM P ++S++D L K
Sbjct: 288 PDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDL 347
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M G + TY L+ GLC + L MK RG++PN Y LI LCK
Sbjct: 348 TKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 407
Query: 129 NGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ + ++L + DV T++++I CKE AL + K G +P+ VT
Sbjct: 408 GGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVT 467
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL 214
++ L A ++L E +G L
Sbjct: 468 FEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 235/528 (44%), Gaps = 95/528 (17%)
Query: 11 ESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
E FI V R G+A + ++ +V F +++ FNS+L+V+++E + F+R
Sbjct: 115 EKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL-----FHR 169
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ GV G TN + PN + +N +I ++CK
Sbjct: 170 ALEFYECGVGGK-------------TN----------------ISPNVLSFNLVIKAMCK 200
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V RA + +M EP+ T+ L+ CKE+ + A++LL++ G P VT
Sbjct: 201 LGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVT 260
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC G ++ ++++ M KGC+PN TYN +I+
Sbjct: 261 FNVLINGLCKKGDMVRVTKLVDN-------------------MFLKGCVPNEVTYNTIIN 301
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS---- 300
C G LD A+ + + M N VTY TLI GL GR DG+ +L +E+
Sbjct: 302 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 361
Query: 301 -----------------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
++G + I Y++++ GL RE + DEA E L
Sbjct: 362 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 421
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M + P A S I GF GN + A R + +M + VPN + Y LIH C++
Sbjct: 422 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 481
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
++REA + M G G P +++++ GLC G+V LKL E M S P
Sbjct: 482 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE-MLCQESDSQPDV 540
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ L++ALC++ A LL M+ +G PD +T N L L ++
Sbjct: 541 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 588
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 199/446 (44%), Gaps = 46/446 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T++ GL + I++ V D + PS FN +++ L K+ D+ R
Sbjct: 221 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG-DMVRVTK 279
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G ++ TY ++ GLCL ++ LL M + PN V Y TLI+ L
Sbjct: 280 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 339
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ L+S +EE N+ +S LI KEE A+ L +K G P++V
Sbjct: 340 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 399
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ +++ LC G++ +A EIL E +G + G + R KEM
Sbjct: 400 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 459
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ C+PN Y++LI CE G L A+ ++ M G+ + V Y ++I GLC+ G +
Sbjct: 460 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 519
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ GLK+ M + S+ + YN +L L ++N A++ L M R + L
Sbjct: 520 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM---LDRGCNPDLI 576
Query: 348 ILGFCVDGNVE------DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
++ E D + D+++ +H + +R+ A+++++
Sbjct: 577 TCNIFLNALREKLNPPQDGREFLDELVVR------------LH---KRQRIVGAAKIIEV 621
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNV 427
M P AST+ ++ LC+ V
Sbjct: 622 MLQKFLPPNASTWERIIPELCKPKKV 647
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 220/496 (44%), Gaps = 44/496 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T I +AR + K + + R + + +N ++ L + + AF
Sbjct: 241 PDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA-VEEAFG 299
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++M+ G+ D +TY LM GLC +R+ + LL M G+KPN V+Y TL+
Sbjct: 300 FKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFM 359
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK A ++ +M +PN + + LI CK L A LL++ G PD
Sbjct: 360 KEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTF 419
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGK--VKGGCRFLKEMERKGCLPNVDTYNI 241
T ++ QG + G L EM G LPNV +Y I
Sbjct: 420 TYNPLM---------------------QGHFQQHDKDGAFELLNEMRNSGILPNVYSYGI 458
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I+ C+ G A ++ +M +G+ N Y LI G G I + L+ M
Sbjct: 459 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKM---- 514
Query: 302 EGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+K + P YNS++ GL + +EA EY Q++K L P S I G+C G
Sbjct: 515 --TKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTG 572
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+E A + QM+ G PN Y L+ Y + + S +++ M G G P +
Sbjct: 573 NLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYG 632
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
V+ L R N+ A ++ E + G +P YS LI LC+ + A LL +M
Sbjct: 633 IVIRNLSRSENMEVAFMVLTEVEK---NGLVPDLHIYSSLISGLCKIADMEKAVGLLDEM 689
Query: 476 VGKGILPDYLTWNSLL 491
+G+ P + +N+L+
Sbjct: 690 AKEGLEPGIVCYNALI 705
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 142/537 (26%), Positives = 244/537 (45%), Gaps = 67/537 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + ++ GL + + + D +S + P++ ++ +++D +KE A AF
Sbjct: 311 PDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEG-KTAEAFD 369
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVG----------------------------- 98
K+M+++GVQ + Y L++GLC ++G
Sbjct: 370 ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHF 429
Query: 99 -----DG-FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDV 148
DG F+LL+ M++ G+ PN Y +I+ LC+NG+ A +L+ +M +PN
Sbjct: 430 QQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 489
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI + KE N+ A LEK PD+ +++ L +VGR+ +A E +
Sbjct: 490 MYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV 549
Query: 209 GEQGRL-------GKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G + G + G C+ L++M G PN DTY L+ Y ++
Sbjct: 550 QKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDY 609
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ + M G + Y +IR L ++ +L +E K G + Y+
Sbjct: 610 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE--KNGLVPDLHIYS 667
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ GL + ++A+ L +M K L P V + I GFC G++ A+ FD ++ +
Sbjct: 668 SLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK 727
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G VPN V Y LI C+ + +A +L KEM G P A +N + +G ++ A
Sbjct: 728 GLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQA 787
Query: 431 LKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
L L EE RG SL ++ L+ C++G Q LL M+ + I+P+ T
Sbjct: 788 LFLTEEMFNRGYANVSL-----FNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQT 839
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 139/561 (24%), Positives = 250/561 (44%), Gaps = 45/561 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
+E + +I GL R+ + + + + + ++P + ++++ L K + A+A
Sbjct: 277 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALL 336
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M SG++ + Y L+ G + + F +L M S GV+PN ++Y+ LI LCK
Sbjct: 337 -DEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCK 395
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++GRA L+ +M + P+ T++ L+ + ++ + A LL + + G +P+V +
Sbjct: 396 IGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G +A +LEE +G + G + C L++M
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ P++ YN LI G ++ A + + ++ G+ + TY LI G C G ++
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDR 344
++L+ M +S G K Y +L G ++ N ++ L+ M +K P
Sbjct: 576 KADQLLRQMLNS--GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDK--PDNHIY 631
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I N+E A ++ + G VP++ IY LI C+ + +A L+ EM
Sbjct: 632 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAK 691
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P +N ++ G CR G++ A + + + +G +P Y+ LI C+ G
Sbjct: 692 EGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL---AKGLVPNCVTYTALIDGNCKNGD 748
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS--------FVMV 515
A L +M+ +GI PD +N L C L L EM + F +
Sbjct: 749 ITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTL 808
Query: 516 VHELSAKEKRCKLRSLNHLAH 536
VH KR KL+ L H
Sbjct: 809 VHGFC---KRGKLQETEKLLH 826
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 187/417 (44%), Gaps = 34/417 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
+A L LC + LLH M P V+ + I ++ R+RS
Sbjct: 117 AFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLAS--IQRAIQDTD-HRSRS----- 168
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ +L+ Y K ++ NA ++ G P +L+ L DA+
Sbjct: 169 PSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRA----DAM 224
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+L K+KG ME G LP+V TY+ I ++C+ D+A VF +M
Sbjct: 225 ELL---------WKLKGF------MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEM 269
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + N VTY+ +I GLC G +++ + M D G Y +++ GL + +
Sbjct: 270 RRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDY--GLSPDAFTYGALMNGLCKGS 327
Query: 323 QQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ EA L +M L P V + GF +G +A +MI G PN ++YD
Sbjct: 328 RLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYD 387
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI C+ ++ AS+L+KEM G P T+N ++ G +Q + A +L+ E MR
Sbjct: 388 NLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNE-MRN 446
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G LP Y +I LC+ G + A LL +M+ +G+ P+ + L+I S++
Sbjct: 447 --SGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE 501
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 29 DVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
D+ A DL + P ++N +L + DL +A + + M + + +
Sbjct: 748 DITDAFDLYKEMLDRGIAPDAFVYN-VLATGCSDAADLEQALFLTEEMFNRGYANVSLFN 806
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
L+ G C ++ + KLLHVM R + PN+ ++ K GK+G A + +++++
Sbjct: 807 TLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 207/440 (47%), Gaps = 34/440 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
M GV + +TY +L++ LC NRVG K+L M +G P+ V Y T++ LCK
Sbjct: 149 NMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLD 208
Query: 131 KVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
++ A +++ M P +++ ++ A C+E + ++ G P+V+T T +++
Sbjct: 209 RLDEATEVLAAMP-PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVD 267
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
C + G+++ C L M GC PNV T+ L+ + G
Sbjct: 268 AFC-------------------KAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDG 308
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ ALD++ M +G + + V+Y+ LIRGLCS G + IL ME + G +
Sbjct: 309 RVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSME--QHGCFPNVRT 366
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y++++ G + A+ M + P V + + FC AK D+M+
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 426
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E PN V ++ LI + C RV A + EM HG +P T+N ++ GL R+GN G
Sbjct: 427 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 486
Query: 429 TALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
AL +V E GI + Y+ ++ LC+ + A + + +M+ +GI P+ T+
Sbjct: 487 DALHMVTEMQSHGIELSLVT----YNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTF 542
Query: 488 NSLLICLSQQ-----TTWLL 502
++++ ++ W+L
Sbjct: 543 SAIIHAYCKEGEVRMAAWML 562
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 219/489 (44%), Gaps = 34/489 (6%)
Query: 26 MINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
M+ VV D + + + P++ +N ++ L + + A +M G DD TYA
Sbjct: 139 MVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYA 198
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
++ LC +R+ + ++L M P + YN ++ +LC+ ++ S++SDM
Sbjct: 199 TIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGR 253
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+PN +T++ ++ A+CK L A +L + G P+VVT T ++ L GRV DA
Sbjct: 254 GLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDA 313
Query: 202 VEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ +G +G +KG L ME+ GC PNV TY+ LI
Sbjct: 314 LDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ + G L A+ ++NDM G N V Y ++ C + ++ M E
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM--LLENCP 431
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
+N+++ L + AL +M + P + I G +GN DA
Sbjct: 432 PNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHM 491
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+M G ++V Y+ ++ CQ REA + +M G P A TF+ ++ C+
Sbjct: 492 VTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCK 551
Query: 424 QGNVG-TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+G V A L ++ R L Y+ L+ LC + A L++M+ +GI P
Sbjct: 552 EGEVRMAAWMLGAMNVVNCHRNILV----YTILMAELCNQDKLVDAMTYLLKMLYEGIYP 607
Query: 483 DYLTWNSLL 491
+ +TWN L+
Sbjct: 608 NTVTWNVLV 616
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 197/425 (46%), Gaps = 31/425 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
PP + + ++ L R + +V +D+V R + P++ + +I+D K ++ +A
Sbjct: 221 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGR-GLQPNVITYTTIVDAFCKAGELRMAC 279
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A +M+ +G + T+ L++GL RV D + M + G P++V YN LI
Sbjct: 280 AIL-ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRG 338
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC G + A S+++ ME+ PN T+S LI + K +L A+ + G P+
Sbjct: 339 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPN 398
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VV T ++++ C A +++ +M + C PN T+N
Sbjct: 399 VVVYTNMVDVFCKKLMFNQAKSLID-------------------KMLLENCPPNTVTFNT 439
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI S C+ + AL VF++M+ G N TY+ LI GL G D L ++ M+
Sbjct: 440 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQ--S 497
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
G + + YN+V+ GL + EA+ ++ +M + + P A S I +C +G V
Sbjct: 498 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRM 557
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M N+++Y L+ C ++++ +A + +M G P T+N ++
Sbjct: 558 AAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 617
Query: 420 GLCRQ 424
G+ R
Sbjct: 618 GVFRN 622
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 242/512 (47%), Gaps = 33/512 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S PPD + ++R L R D + +V + + +++D + + L
Sbjct: 89 SSPRPPDVPLANRLVRDLCRRGRPADAAR---VVEACGPEATAATYGALVDGYCRAGL-L 144
Query: 64 ARAFYRKKMMASGVQGDD-YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A M + VQ Y + L+ LC RV D +L M RG P+ V YN L
Sbjct: 145 EDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNIL 204
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ + CK +A L+ M EPN+VT++++I A C+E ++ A LL S G
Sbjct: 205 LQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGC 264
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
P+ V VL+ CS+ R +DA EIL+E + R G ++
Sbjct: 265 KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTL 324
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+L++M + GC NV TYN +IS CE G +DSAL++ ++M+ G + VTY+T+++GLC
Sbjct: 325 YLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLC 384
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
S R +D +++ M + S +N+++ ++ +A E KQM + P
Sbjct: 385 SADRWEDAEELMIKMSQNDRLPDN--STFNTIISFWCQKGLILQAFEVFKQMPEKGCNPN 442
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ S I G G +E A ++M +G + +Y L + +E+++ E +++
Sbjct: 443 STTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLTESLNKEDKIEEVVQVVH 501
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ G P +NTVL GLCR G A+ ++ DM + G +P Y LI+ L
Sbjct: 502 KLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVL-ADM--VSCGCMPDESTYIILIEGLF 558
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+G + A LL ++ + +L + L N L+
Sbjct: 559 YEGYSKEARELLSRLCSRDVLSNSLIKNEALL 590
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 29/323 (8%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PDV +++ LC GR DA ++E G + TY
Sbjct: 94 PDVPLANRLVRDLCRRGRPADAARVVEACGPEA----------------------TAATY 131
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ YC G+L+ A V M + + ++ LI LC GR+ D L +L M
Sbjct: 132 GALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM-- 189
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
G + YN +L + +ALE + M E P V ++ I C +G+V
Sbjct: 190 LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDV 249
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A+ + + G PN V Y+ ++ +C ER +A E++ EM P +T N +
Sbjct: 250 DQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++ LCR+G + +E+ + G Y+ +I +CE+G SA LL M
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSK---HGCTANVVTYNAVISGMCEQGNVDSALELLSNMQS 366
Query: 478 KGILPDYLTWNSLLICLSQQTTW 500
G PD +T+N++L L W
Sbjct: 367 FGCKPDIVTYNTVLKGLCSADRW 389
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 214/490 (43%), Gaps = 67/490 (13%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSL 126
K+M G D +Y L+KG C R + +LLH+M + R PN V Y T+I+
Sbjct: 154 KRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGF 213
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G+V +A +L +M +PN VT++ +I CK + + A + ++ G PD
Sbjct: 214 FTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDN 273
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG------RLGKV------KGGCR----FLKE 226
T ++ S+G+ + V +LEE G G + G CR F
Sbjct: 274 DTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDS 333
Query: 227 MERKGCLPNVDTYNILISSYCETGVL---------------------------------- 252
M RKG PNV Y ILI Y G L
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAM 393
Query: 253 -DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSKEGSKGRISP 310
D A+ +FN MK G+S + V + LI LC GR+DD LK Q+M EG I
Sbjct: 394 IDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM---NEGVAPNIFV 450
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+NS++YGL ++ ++A E+ +M + + P V + + C G V A+R D M
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+V+ Y LI +C R+ EA++ + M G P T+NT+L G CR G +
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A + E +R G PG YS ++ L F A L + M+ G + +N
Sbjct: 571 DAYGVFREMLRN---GITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627
Query: 489 SLLICLSQQT 498
+L LS+
Sbjct: 628 IILNGLSKNN 637
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 205/476 (43%), Gaps = 66/476 (13%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V D TY+IL+ C R+ GF ++ G + N+++ N L+ LC ++ A
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 137 S-LMSDMEE----PNDVTFSILICAYCKEENLVNALVLL--------------------- 170
L+ M E P+ V+++ L+ +C E+ AL LL
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 171 ----------EKSFSF-------GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
+K+++ G P+VVT T V++ LC V A + ++ ++G
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+GK K R L+EM G P+ TY L++ C G A
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARF 329
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
F+ M GI N Y LI G + G + + +L LM ++ I +N +
Sbjct: 330 FFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI--FNIIFTA 387
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
++ DEA+ +M++ L P V+ I C G V+DA F+QM+ EG PN
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ +++ L++ C ++ +A E EM G P FNT+L LC +G V A +L++
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R G+ P Y+ LI C G A+ L M+ G+ PD T+N+LL
Sbjct: 508 LMER---VGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 192/434 (44%), Gaps = 39/434 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ +I+ +I G ++++ +L+ ++P IFN I K+ ID A
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D + L+ LC RV D + M + GV PN ++N+L++ LC
Sbjct: 401 F-NKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A+ +M P+ V F+ ++C C + ++ A L++ G PDV+
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVI 519
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ T ++ C VGR+ +A + L+ M G P+ TYN L+
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDV-------------------MLSVGLKPDEWTYNTLL 560
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G +D A VF +M +GI+ VTY T++ GL + R + ++ M S G
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS--G 618
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV-------DGN 356
+ I YN +L GL + N DEA + + + + D L+I F + G
Sbjct: 619 KQWNIWIYNIILNGLSKNNCVDEAFKLFQSL-----CSKDFQLEITTFNIMIGALFKSGR 673
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
EDA F + G VP+V Y + +E + E +L M G P + N
Sbjct: 674 NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733
Query: 417 VLSGLCRQGNVGTA 430
++ L +G++ A
Sbjct: 734 LVRRLLHRGDITRA 747
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 207/489 (42%), Gaps = 30/489 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G +VV+ + +S + P + S+L+ L F+
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ G++ + Y IL+ G + + LL++M G+ P+ I+N + + K
Sbjct: 331 FDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAK 390
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A + + M++ P+ V F LI A CK + +A++ + + G P++
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC+V + A E F EM +G P+V +N ++
Sbjct: 451 FNSLVYGLCTVDKWEKAKE-------------------FYFEMLNQGIRPDVVFFNTILC 491
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C G + A + + M+ G + ++Y TLI G C GRID+ K L +M G
Sbjct: 492 NLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSV--GL 549
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
K YN++L+G R + D+A ++M + + P V S + G +AK
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKE 609
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+ MI G N+ IY+ +++ + V EA +L + + + +TFN ++ L
Sbjct: 610 LYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALF 669
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ G A+ L G +P Y + + L E+G + L M G P
Sbjct: 670 KSGRNEDAMHLFATIS---SYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726
Query: 483 DYLTWNSLL 491
+ N+L+
Sbjct: 727 NSRMLNALV 735
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 95/253 (37%), Gaps = 52/253 (20%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDID 62
S+ PDE + T++ G RA I+D + R +TP + +++IL +
Sbjct: 546 SVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFS 605
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A+ Y M+ SG Q + + Y I++ GL N V + FKL + S+ + +N +
Sbjct: 606 EAKELYL-NMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIM 664
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
I +L K+G+ A L + + S+G VPDV
Sbjct: 665 IGALFKSGRNEDAMHLFATIS-------------------------------SYGLVPDV 693
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T + E L G LEE + ME+ G PN N L
Sbjct: 694 FTYCLIAENLIEEG-------YLEEFDD------------LFSAMEKSGTTPNSRMLNAL 734
Query: 243 ISSYCETGVLDSA 255
+ G + A
Sbjct: 735 VRRLLHRGDITRA 747
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 204/412 (49%), Gaps = 31/412 (7%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EPNDV 148
C + + LL M +G P+ ++ LI V +A +M +E +P+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI +CK + +A +L++ S F PD VT ++ LCS G++ A+++L++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ- 214
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ C P V TY ILI + G +D AL + ++M G+
Sbjct: 215 ------------------LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLK 256
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ TY+T+IRG+C G +D ++++ +E +G + + YN +L L + + +E
Sbjct: 257 PDMFTYNTIIRGMCKEGMVDRAFEMIRNLE--LKGCEPDVISYNILLRALLNQGKWEEGE 314
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ + +M EK P V S+ I C DG +E+A M E+G P+ YD LI A+
Sbjct: 315 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 374
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GS 445
C+E R+ A E ++ M G LP +NTVL+ LC+ G AL++ + +G G
Sbjct: 375 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK----LGEVGC 430
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P S Y+ + AL G A ++++MV GI PD +T+NS++ CL ++
Sbjct: 431 SPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCRE 482
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 207/421 (49%), Gaps = 32/421 (7%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA-- 135
Q D + Y L+ G C NR+ D ++L M+S+ P++V YN +I SLC GK+ A
Sbjct: 151 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 210
Query: 136 --RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
L+SD +P +T++ILI A E + AL LL++ S G PD+ T ++ +C
Sbjct: 211 VLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G V A E+ ++ +E KGC P+V +YNIL+ + G +
Sbjct: 271 KEGMVDRAFEM-------------------IRNLELKGCEPDVISYNILLRALLNQGKWE 311
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+ M + N VTY LI LC G+I++ + +L+LM++ +G Y+
Sbjct: 312 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE--KGLTPDAYSYDP 369
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ RE + D A+E+L+ M + P V+ + + C +G + A F ++ E G
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429
Query: 372 GVPNVVIYDCLIHA-YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
PN Y+ + A + +++R A ++ EM +G P T+N+++S LCR+G V A
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIR-ALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKA 488
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+ DMR P Y+ ++ C+ + A +L MVG G P+ T+ L
Sbjct: 489 FELL-VDMRSCEFH--PSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVL 545
Query: 491 L 491
+
Sbjct: 546 I 546
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 199/418 (47%), Gaps = 28/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + +I G + I+D + D + + +P +N ++ L + +DLA
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++ Q TY IL++ L V + KLL M SRG+KP+ YNT+I +C
Sbjct: 212 L-DQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V RA ++ ++E EP+ ++++IL+ A + L+ K FS P+VV
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + ++ LC G++ +A+ +L+ E+G R G++ FL+ M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GCLP++ YN ++++ C+ G D AL++F + G S N +Y+T+ L S G
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG-- 448
Query: 288 DDGLKILQL-MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
D ++ L + +E G YNS++ L RE D+A E L M + P V
Sbjct: 449 -DKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTY 507
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ +LGFC +EDA D M+ G PN Y LI EA EL ++
Sbjct: 508 NIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPR 340
C G + L +L+ M ++G + ++ G + +A+ ++ +EK P
Sbjct: 96 CRSGNYIESLHLLETM--VRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPD 153
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ I GFC ++DA R D+M + P+ V Y+ +I + C ++ A +++
Sbjct: 154 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ P T+ ++ +G V ALKL++E + RG P Y+ +I+ +C
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDE---MLSRGLKPDMFTYNTIIRGMC 270
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++G A ++ + KG PD +++N LL L Q W
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKW 310
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 212/432 (49%), Gaps = 29/432 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D TY ++ G C+ + + KLL M ++G++ N+ +Y ++I LC G+V A ++
Sbjct: 286 DVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVL 345
Query: 140 SDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
DM + V F+ +I +C + +L A L E+ G D VT T ++ LC
Sbjct: 346 EDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRA 405
Query: 196 GRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTY 239
G + +A +L+E ++G + G + R EM + PNV TY
Sbjct: 406 GELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTY 465
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L C+ G + +A ++ ++M G+ N TY++LI GLC G ++ ++I+ ME
Sbjct: 466 TALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEA 525
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ G + + Y +++ L + + D A L++M + + P ++ + GFC+ G V
Sbjct: 526 A--GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E K+ + M+E+ PNVV Y+ L+ YC ++ ++ +E+ K M P +T+N +
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNIL 643
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G C+ N+ AL +E I +G + YS LI+ L +K F A + +M
Sbjct: 644 IKGHCKARNMKEALYFHQE---MIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRN 700
Query: 478 KGIL--PDYLTW 487
+G+ PD ++
Sbjct: 701 EGLTAEPDVYSF 712
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 205/451 (45%), Gaps = 32/451 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--ID 62
+ SPPD + T++ G + + VK D ++ + + ++ S++ +L + D
Sbjct: 281 MSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSD 340
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
R + M GV D + ++ G C + +L M+ RG+ + V + L
Sbjct: 341 ALRVL--EDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTAL 398
Query: 123 IHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I+ LC+ G++ A ++ +M + + VT+++LI YCK N+V A + +
Sbjct: 399 INGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+VVT T + + LC G V A E+L EM KG NV T
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLH-------------------EMCNKGLELNVYT 499
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN LI+ C+ G L+ A+ + +M+ G + TY TLI LC G D +LQ M
Sbjct: 500 YNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEML 559
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
D +G K I+ YN ++ G + + + L+ M + + P V + + +C+D N
Sbjct: 560 D--KGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ + M + PN Y+ LI +C+ ++EA +EM G AS+++
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
++ L ++ A ++ + MR G + P
Sbjct: 678 LIRLLNKKKKFSEA-RVFFDKMRNEGLTAEP 707
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 202/430 (46%), Gaps = 54/430 (12%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
D ++ +L+ LCL + +LL ++ G+ P+ N ++ L + A
Sbjct: 195 AFSSDPASFDLLL--LCLPSA-----ELLRRLRQYGLSPSPESCNAVLSRL----PLDEA 243
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+L ++ + N + +IL+ A L +A ++ S PDVVT ++ C
Sbjct: 244 IALFRELPDKNVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVR 300
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + +AV++L+E M KG N Y +I+ C G + A
Sbjct: 301 GELENAVKLLDE-------------------MAAKGLESNATVYTSVIALLCNKGQVSDA 341
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
L V DM + G++ + V + T+I G CS G + ++ + M+ K G + +++
Sbjct: 342 LRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQ--KRGLAADRVTHTALI 399
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL R + EA L++M + L V ++ I G+C GN+ +A R ++M+
Sbjct: 400 NGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVA 459
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PNVV Y L C++ VR A+EL+ EM G T+N++++GLC+ GN+ A+++
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRI 519
Query: 434 VEEDMRGIGRGSLPGSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+ E + +GH Y+ LI LC+ G F A +L +M+ KGI P T+
Sbjct: 520 MTE---------MEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATY 570
Query: 488 NSLL--ICLS 495
N L+ C+S
Sbjct: 571 NVLMNGFCMS 580
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 204/428 (47%), Gaps = 33/428 (7%)
Query: 45 SLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL 104
SL N +L LVKE+ + K+M+ + + T+ I + GLC ++ +
Sbjct: 164 SLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAI 223
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGR---ARSLMSDMEE----PNDVTFSILICAY 157
MK+ G+ PN V YNTL+ CK G G+ A + M +M PN+VTF+ LI +
Sbjct: 224 EDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK+EN+ A E+ G P++VT ++ LC+ G++ +A+++ ++
Sbjct: 284 CKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDK---------- 333
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
M G PN+ TYN LI+ +C+ ++ A VF+D+ + N +T++T+
Sbjct: 334 ---------MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
I C G +++G + M D EG +S YN ++ GL R+ A E L +ME
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLD--EGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
L V ++ I G C + +A++ ++M G PN V Y+ L+ YC E +++ A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+ M P T+N ++ G C+ + A L+ E + +G P Y +
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLE---KGLNPNRTTYDIV 559
Query: 456 IKALCEKG 463
+ EKG
Sbjct: 560 RLEMLEKG 567
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 33/411 (8%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME--- 143
L+ L N++GD + M R + N +N I+ LC+ GK+ +A + DM+
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 144 -EPNDVTFSILICAYCKEEN---LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
PN VT++ L+ YCK + + A +++ + P+ VT +++ C V
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A + EE M+++G PN+ TYN LI+ C G L+ A+D++
Sbjct: 291 AAKKAFEE-------------------MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ N VTY+ LI G C + + K+ + SK+ + +N+++
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD--DVSKQELVPNVITFNTMIDAYC 389
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+E +E M E + P + I G C +++ AK ++M +G +VV
Sbjct: 390 KEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVV 449
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ LI C+ ++ R A +L+ EM G P T+NT++ G C +G + AL +
Sbjct: 450 TYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV---R 506
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
R P Y+ LIK C+ ++A+ LL +M+ KG+ P+ T++
Sbjct: 507 TRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 184/379 (48%), Gaps = 32/379 (8%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE----DIDLARAF 67
+ F I GL RA +N A + + + ++P++ +N+++D K + A AF
Sbjct: 201 NTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAF 260
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M+A+ + ++ T+ L+ G C V K M+ +G+KPN V YN+LI+ LC
Sbjct: 261 M-KEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLC 319
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
NGK+ A L M +PN VT++ LI +CK++ + A + + VP+V+
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C G ++EE G M +G LPNV TYN LI
Sbjct: 380 TFNTMIDAYCKEG-------MMEE------------GFSLCSSMLDEGILPNVSTYNCLI 420
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C L +A ++ N+M+ G+ + VTY+ LI GLC + + K+L M + G
Sbjct: 421 AGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNL--G 478
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
K YN+++ G E + AL +MEK P V ++ I G+C +E A
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAAN 538
Query: 362 RCFDQMIEEGGVPNVVIYD 380
++M+E+G PN YD
Sbjct: 539 GLLNEMLEKGLNPNRTTYD 557
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 186/390 (47%), Gaps = 27/390 (6%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
K G K + N L+ +L K K+G + +M + N TF+I I C+ L
Sbjct: 157 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 216
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A +E ++G P+VVT +++ C ++G GK+ F
Sbjct: 217 NKAEDAIEDMKAWGISPNVVTYNTLVDGYC----------------KRGSAGKMYKAEAF 260
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+KEM PN T+N LI +C+ + +A F +M+ G+ N VTY++LI GLC+
Sbjct: 261 MKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCN 320
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
G++++ + + M G K I YN+++ G ++ EA + + K L P
Sbjct: 321 NGKLEEAIDLWDKMVGL--GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNV 378
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + I +C +G +E+ M++EG +PNV Y+CLI C+++ ++ A EL+ E
Sbjct: 379 ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE 438
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G T+N ++ GLC+ A KL+ E M +G P Y+ L+ C
Sbjct: 439 MENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNE-MFNLGLK--PNHVTYNTLMDGYCM 495
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G ++A + +M + P+ +T+N L+
Sbjct: 496 EGKLKAALNVRTRMEKERKQPNVVTYNVLI 525
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 181/386 (46%), Gaps = 41/386 (10%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLE 171
VK +++ HSL +G A +L+ DM L+ AY K L A
Sbjct: 105 VKNEKHTVSSVFHSLLLDGGRPGATALIIDM----------LVLAYVKNLELHCAYEAFT 154
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
++ +GF + + +L L ++ D + KEM ++
Sbjct: 155 RAKDYGFKLSLTSCNPLLSALVKENKIGDVEYV-------------------YKEMIKRR 195
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
N++T+NI I+ C G L+ A D DMK GIS N VTY+TL+ G C G
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 292 KILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
K M KE +I P +N+++ G ++ A + ++M+K L P V +
Sbjct: 256 KAEAFM---KEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN 312
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C +G +E+A +D+M+ G PN+V Y+ LI+ +C+++ ++EA+++ +++
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+P TFNT++ C++G + L + G LP Y+ LI LC K
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSS---MLDEGILPNVSTYNCLIAGLCRKQDL 429
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
Q+A LL +M KG+ D +T+N L+
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILI 455
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 42/225 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE--------- 59
P+ + +I G + +M+ + K D VS+ + P++ FN+++D KE
Sbjct: 341 PNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL 400
Query: 60 ---------------------------DIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
D+ A+ + M G++GD TY IL+ GLC
Sbjct: 401 CSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNE-MENKGLKGDVVTYNILIDGLC 459
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
++ + KLL+ M + G+KPN V YNTL+ C GK+ A ++ + ME +PN V
Sbjct: 460 KNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVV 519
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV-LELL 192
T+++LI YCK L A LL + G P+ T V LE+L
Sbjct: 520 TYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEML 564
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 211/446 (47%), Gaps = 34/446 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+A+G++ + Y L+ G C + + F+L H M +G+ PN+ + LI LC
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L +M E PN+VT+++LI +CKE N V A LL++ G VPD T
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569
Query: 187 KVLELLCSVGRVMDAVEILEE-SGEQ------------------GRLGKVKGGCRFLKEM 227
++ LCS GRV +A E + + GEQ GRL CR EM
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACR---EM 626
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G ++ Y++LI S +D+ M G+ + V Y T+I G +
Sbjct: 627 LGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNL 686
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ +M EG + Y +++ GL + D+A ++M P +
Sbjct: 687 KMAFGLWDIM--VSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 744
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ +GN+E A + D ++E G + N V Y+ LI +C+ R++EA+E++ M
Sbjct: 745 CFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDS 803
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P +++T++ CR+G++ A+KL E + RG P + Y+ LI C G
Sbjct: 804 GISPDCISYSTIIYEYCRRGDLKEAIKLWES---MLNRGVNPDTVAYNFLIYGCCVTGEL 860
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A L M+ +G+ P+ T+NSL+
Sbjct: 861 TKAFELRDDMMRRGVKPNRATYNSLI 886
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 207/453 (45%), Gaps = 63/453 (13%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P ++ + +L+ L++ +A + ++++SG++ D Y Y +++ LC +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLF-DEIVSSGLRPDVYVYTAVVRSLCELKDFIRARE 236
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA---RSLMSDMEEPNDV-TFSILICAYC 158
++ M+S G + YN I LCKN +V A ++L+S DV T+ L+ C
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K E ++ + FGFVP ++ +++ L G + A +++ KVK
Sbjct: 297 KVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVN---------KVK 347
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ G P++ YN LI+S C+ G LD A +FN+M G+ N VTY LI
Sbjct: 348 ----------KFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
C G++D L L M ++ G K + PY+S+
Sbjct: 398 DSFCKRGKLDVALHFLGKM--TEVGIKATVYPYSSL------------------------ 431
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
I G C G + AK FD+MI G PNVVIY LI YC+E + A L
Sbjct: 432 ---------ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
EMTG G P TF ++SGLC + A KL E + +P Y+ LI+
Sbjct: 483 YHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE---MVEWNVIPNEVTYNVLIEG 539
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C++G A LL +MV KG++PD T+ L+
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLI 572
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 225/501 (44%), Gaps = 33/501 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMAS 75
V+ GL R R + D + + P + ++ +++ L + +D AR +M +S
Sbjct: 186 VLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVI-GRMESS 244
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G TY + ++GLC RV + ++ +++ +G++ + Y TL+ LCK +
Sbjct: 245 GCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAG 304
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+M++M E P++ S L+ K+ N+ +A L+ K FG P + ++
Sbjct: 305 EEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINS 364
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+C G++ +A + G KG PN TY+ILI S+C+ G
Sbjct: 365 MCKDGKLDEAESLFNNMGH-------------------KGLFPNDVTYSILIDSFCKRGK 405
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD AL M GI Y +LI G C G++ + M G K + Y
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM--IANGLKPNVVIY 463
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
S++ G +E + A +M + + P + I G C + +A + F +M+E
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+PN V Y+ LI +C+E A EL+ EM G +P T+ ++SGLC G V
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A + + D++ G +S L+ C++G A +M+G+G+ D + ++
Sbjct: 584 AREFM-NDLQ--GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640
Query: 490 LLI-CLSQQTTWLLLLLLNEM 509
L+ L QQ ++ LL +M
Sbjct: 641 LIYGILRQQDRRSIIDLLKQM 661
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 197/429 (45%), Gaps = 30/429 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ F +I GL A + + K + +N+ P+ +N +++ KE + RAF
Sbjct: 493 PNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG-NTVRAFE 551
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G+ D YTY L+ GLC T RV + + ++ ++ K N + ++ L+H C
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYC 611
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A R ++ + V +S+LI ++++ + + LL++ G PD V
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ + G +K M +GCLPNV TY LI
Sbjct: 672 LYTTMID-------------------ANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALI 712
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G++D A + +M N TY + L S G I+ K +QL + EG
Sbjct: 713 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE---KAIQLHDVLLEG 769
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YN ++ G + + EA E L M + P + S I +C G++++A
Sbjct: 770 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 829
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ ++ M+ G P+ V Y+ LI+ C + +A EL +M G P +T+N+++ G
Sbjct: 830 KLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 889
Query: 422 CRQGNVGTA 430
C +V +
Sbjct: 890 CLMSSVSST 898
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 230/481 (47%), Gaps = 30/481 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
+IR + +D + D++ + P + N +L + +K + +M
Sbjct: 127 LIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMR 186
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
++ T+ I++ LC ++ + + +M++ G+KPN V YNT+IH C G+V AR
Sbjct: 187 IKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGAR 246
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
+ M+ +P+ T+ I CKE L A +LEK G P VT +++
Sbjct: 247 MIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C+ G + A + + +M R+G +P V TYN+LI + +
Sbjct: 307 CNKGNLEMAFD-------------------YRDKMVREGLMPTVSTYNMLIHALFLDCKM 347
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A + +M G+ + VTY+ LI G C G + + M SK R++ Y
Sbjct: 348 DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEM-ISKGIQPTRVT-YT 405
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++Y L + + +A + +++ + +FP + + I G C +GN++ A +M +
Sbjct: 406 SLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM 465
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
VP+ V ++ L+ C+E +V A EL++EM G P ++NT++SG ++G++ A
Sbjct: 466 KVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA 525
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ V ++M IG P Y+ LI+ LC+ A LL +M+ KGI P+ T+ SL
Sbjct: 526 FR-VRDEMLSIGFN--PTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSL 582
Query: 491 L 491
+
Sbjct: 583 I 583
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 139/504 (27%), Positives = 241/504 (47%), Gaps = 40/504 (7%)
Query: 4 SIQSPPDESI-FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
S+ PD + F+T I G G + + + + N PSL++ ++ V
Sbjct: 46 SLHKTPDLAFQFVTHI-GFGDLDIKSKCLAMAVISHAPNSKPSLQLLKETINSGVYS--- 101
Query: 63 LARAFYRKKMMASGVQG-DDYT-YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + + +A GV G Y Y +L++ C R D F+ +MK +GV P+ N
Sbjct: 102 -IREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACN 160
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
++ K+ + +A L ++M + + VTF+I+I CKE L A + +
Sbjct: 161 DMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEAL 220
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P+VVT ++ CS GRV A I + M+ +G P+
Sbjct: 221 GIKPNVVTYNTIIHGYCSRGRVEGARMIFDL-------------------MKCRGVKPDS 261
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY IS C+ G L+ A + MK G+ VTY+TLI G C+ G ++
Sbjct: 262 YTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDK 321
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M +EG +S YN +++ L+ + + DEA +K+M + L P +V ++ I G+C
Sbjct: 322 M--VREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRC 379
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GNV+ A D+MI +G P V Y LI+ + R+++A +L +++ G P F
Sbjct: 380 GNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMF 439
Query: 415 NTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
N ++ G C GN+ A +++E D + +P ++ L++ C +G ++A L+
Sbjct: 440 NALIDGHCANGNMDRAFAMLKEMDQMKV----VPDEVTFNTLMQGRCREGKVEAARELIE 495
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ 497
+M +GI PD++++N+L+ S++
Sbjct: 496 EMKSRGIKPDHISYNTLISGYSKR 519
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 200/416 (48%), Gaps = 37/416 (8%)
Query: 39 RFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV 97
R + S+ FN +++VL KE + A+ F M A G++ + TY ++ G C RV
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFI-GLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
+ +MK RGVKP+S Y + I +CK GK+ A ++ M+E P VT++ L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
I YC + NL A +K G +P V T ++ L ++ +A I++E E+G
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
R G VK EM KG P TY LI + G + A D
Sbjct: 363 VPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADD 422
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNS 313
+F + GI + + ++ LI G C+ G +D +L+ M+ K + P +N+
Sbjct: 423 LFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMK------VVPDEVTFNT 476
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G RE + + A E +++M+ + P + + I G+ G+++DA R D+M+ G
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
P ++ Y+ LI C+ E A +L+KEM G P +T+ +++ G+ GNV
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI---GNV 589
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 136/458 (29%), Positives = 216/458 (47%), Gaps = 32/458 (6%)
Query: 60 DIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
D+ L AF Y + M+ G + D LM LC +N++ K++ +M G P+
Sbjct: 75 DLRLNDAFLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPAS 134
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
L+++LCK G VG A L+ MEE N VT++ L+ C NL +L +L+K
Sbjct: 135 CTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFM 194
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G VP+V T + +LE +E G + R L E+ KG P
Sbjct: 195 KKGLVPNVFTYSFLLE------------AAYKERGADEAI-------RLLDEIVAKGGKP 235
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N+ +YN+L++ C+ G + A+ F D+ G S N V+Y+ L+R LC GR + ++L
Sbjct: 236 NLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELL 295
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK--ILGFC 352
M+ + I +N ++ L Q D+ALE L M + +A S I C
Sbjct: 296 AEMDGGERSPS--IVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPIIARLC 353
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+G V+ +C DQM+ PN Y+ I C+E +V+EA +++ +
Sbjct: 354 KEGKVDLVVKCLDQMMYRRCNPNEGTYNA-IAVLCEEGKVQEAFSIIQSLGNKQNSSTHD 412
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ V+S LCR+GN A +L+ E + G +P S YS LI+ LC +G A +
Sbjct: 413 FYKGVISSLCRKGNTYPAFQLLYEMTK---YGFVPDSYTYSSLIRGLCSEGMLDEAMEIF 469
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
M PD +N+L++ L + L L++ EM+
Sbjct: 470 SIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMM 507
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 171/378 (45%), Gaps = 32/378 (8%)
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEE------NLVNALVLLEKSFSF 176
+H+L N R + P D F++ K + L +A + LE
Sbjct: 32 LHTLSLNKGFSRVLASTQITISPKDNVFTLPNWRSGKNDPRTRDLRLNDAFLYLEYMIGK 91
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD T+++ LC ++ A +++E M G P+
Sbjct: 92 GHKPDGGQATQLMYELCKSNKMRKATKVME-------------------LMIGSGTTPDP 132
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
+ L+++ C+ G + A+ + M+ G N VTY++L+RGLC G + L+IL
Sbjct: 133 ASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDK 192
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
K+G + Y+ +L Y+E DEA+ L ++ + P V ++ + G C +
Sbjct: 193 F--MKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKE 250
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G E+A + F + +G PNVV Y+ L+ + C E R +A EL+ EM G P TF
Sbjct: 251 GRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTF 310
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ L G AL+++++ R + + + Y+P+I LC++G L Q
Sbjct: 311 NILIGSLALHGQTDQALEVLDDMSRARFKAT---AASYNPIIARLCKEGKVDLVVKCLDQ 367
Query: 475 MVGKGILPDYLTWNSLLI 492
M+ + P+ T+N++ +
Sbjct: 368 MMYRRCNPNEGTYNAIAV 385
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 183/414 (44%), Gaps = 54/414 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + + +++RGL ++ ++ D + + P++ ++ +L+ KE
Sbjct: 164 PTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIR 223
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++A G + + +Y +L+ GLC R + + + S+G PN V YN L+ SLC
Sbjct: 224 LLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLC 283
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ +A+ L+++M+ P+ VTF+ILI + AL +L+ F
Sbjct: 284 YEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAA 343
Query: 184 TITKVLELLCSVGRVMDAVEILEE------SGEQGRL---------GKVKGGCRFLKEME 228
+ ++ LC G+V V+ L++ + +G GKV+ ++ +
Sbjct: 344 SYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAIAVLCEEGKVQEAFSIIQSLG 403
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K D Y +ISS C G A + +M G + TY +LIRGLCS G +D
Sbjct: 404 NKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLD 463
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ ++I +ME++ + + +N+++ GL + R D SL +
Sbjct: 464 EAMEIFSIMEENY--CRPDVDNFNALILGLCK------------------CRKTDLSLMV 503
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
F+ M+++G +PN Y ++ +E + A+ ++KE+
Sbjct: 504 ---------------FEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 235/528 (44%), Gaps = 95/528 (17%)
Query: 11 ESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
E FI V R G+A + ++ +V F +++ FNS+L+V+++E + F+R
Sbjct: 99 EKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL-----FHR 153
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ GV G TN + PN + +N +I ++CK
Sbjct: 154 ALEFYECGVGGK-------------TN----------------ISPNVLSFNLVIKAMCK 184
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V RA + +M EP+ T+ L+ CKE+ + A++LL++ G P VT
Sbjct: 185 LGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVT 244
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC G ++ ++++ M KGC+PN TYN +I+
Sbjct: 245 FNVLINGLCKKGDMVRVTKLVDN-------------------MFLKGCVPNEVTYNTIIN 285
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS---- 300
C G LD A+ + + M N VTY TLI GL GR DG+ +L +E+
Sbjct: 286 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHA 345
Query: 301 -----------------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
++G + I Y++++ GL RE + DEA E L
Sbjct: 346 NEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEIL 405
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M + P A S I GF GN + A R + +M + VPN + Y LIH C++
Sbjct: 406 CEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCED 465
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
++REA + M G G P +++++ GLC G+V LKL E M S P
Sbjct: 466 GKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNE-MLCQESDSQPDV 524
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ L++ALC++ A LL M+ +G PD +T N L L ++
Sbjct: 525 VTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREK 572
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 199/446 (44%), Gaps = 46/446 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T++ GL + I++ V D + PS FN +++ L K+ D+ R
Sbjct: 205 PDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG-DMVRVTK 263
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G ++ TY ++ GLCL ++ LL M + PN V Y TLI+ L
Sbjct: 264 LVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLV 323
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ L+S +EE N+ +S LI KEE A+ L +K G P++V
Sbjct: 324 KQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIV 383
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ +++ LC G++ +A EIL E +G + G + R KEM
Sbjct: 384 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ C+PN Y++LI CE G L A+ ++ M G+ + V Y ++I GLC+ G +
Sbjct: 444 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 503
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ GLK+ M + S+ + YN +L L ++N A++ L M R + L
Sbjct: 504 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM---LDRGCNPDLI 560
Query: 348 ILGFCVDGNVE------DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
++ E D + D+++ +H + +R+ A+++++
Sbjct: 561 TCNIFLNALREKLNPPQDGREFLDELVVR------------LH---KRQRIVGAAKIIEV 605
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNV 427
M P AST+ ++ LC+ V
Sbjct: 606 MLQKFLPPNASTWERIIPELCKPKKV 631
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 144/557 (25%), Positives = 241/557 (43%), Gaps = 68/557 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+ S+F +IR R MI D ++ L+ + PS+ N+IL +VK D++ +
Sbjct: 122 NPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFL 181
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M+ + D T+ IL+ LC L+ M+ G P V YNT++H CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 130 GKVGRARSLMSDME---------------------------------------EPNDVTF 150
G+ A L+ M PN+VT+
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY 301
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ + E ++ A LL + +FG P+ VT +++ S G +A+++
Sbjct: 302 NTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEA 361
Query: 211 QGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
+G +G + G C+ F M+R G TY +I C+ G LD
Sbjct: 362 KGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+ + N+M DGI + VTY LI G C GR+ +I+ + G I Y+++
Sbjct: 422 AVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGII--YSTL 479
Query: 315 LYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+Y R E + + M E P ++ + C G V +A+ M +G
Sbjct: 480 IYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+PN V +DCLI+ Y +A + EMT G+ P T+ ++L GLC+ G++ A K
Sbjct: 540 LPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEK 599
Query: 433 LVEEDMRGIGRGSLPGSGHY---SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
++ ++P + + LI A+C+ G A L +MV + ILPD T+ S
Sbjct: 600 FLKS------LQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTS 653
Query: 490 LLICLSQQTTWLLLLLL 506
L+ L ++ ++ +L
Sbjct: 654 LISGLCRKGKTVIAILF 670
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 223/509 (43%), Gaps = 32/509 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E + T++ G + + + + F ++P+ FN+++D + E + A
Sbjct: 296 PNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEG-NFKEALK 354
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
MM A G+ G + +Y +L+ GLC MK GV + Y +I LC
Sbjct: 355 MFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNG + A ++++M +P+ VT+S LI +C+ L A ++ + + G P+ +
Sbjct: 415 KNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGI 474
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ C +G + + + I E +G + GKV F++ M
Sbjct: 475 IYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G LPN +++ LI+ Y +G A VF++M G F TY +L++GLC GG +
Sbjct: 535 TSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
K L+ +++ + N+++ + + D+A+ +M + P + +
Sbjct: 595 IAAEKFLKSLQNVPAAVDTVMC--NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYT 652
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMT 403
I G C G A F + E G VPN V+Y C + + + + ++M
Sbjct: 653 SLISGLCRKGKTVIAI-LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMD 711
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G T N ++ G R G + L+ E M +G P Y+ L+ ++
Sbjct: 712 KLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFE-MGNQNQG--PNLTTYNILLHGYSKRK 768
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLI 492
++ ML M+ GILPD LT S+++
Sbjct: 769 HVSTSFMLYRSMILSGILPDKLTCYSIIL 797
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 136/590 (23%), Positives = 242/590 (41%), Gaps = 89/590 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTP-----SLKIFNSILDVLVKEDIDL 63
PD + +I G R + + + R ++P S I+N +KE I +
Sbjct: 436 PDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRI 495
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV------ 117
A M+ G D +T+ +L+ LC +V + + + M S G+ PN+V
Sbjct: 496 YEA-----MILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLI 550
Query: 118 -----------------------------IYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
Y +L+ LCK G + A + ++
Sbjct: 551 NGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAA 610
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+ V + LI A CK NL A+ L + +PD T T ++ LC G+ + A+
Sbjct: 611 VDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILF 670
Query: 205 LEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+E+ +G L G+ K G F ++M++ G +V T N +I Y
Sbjct: 671 AKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYS 730
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G ++ D+ +M N TY+ L+ G + + + M S +
Sbjct: 731 RMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGI-LPDK 789
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDR---SLKILGFCVDGNVEDAKR 362
++ Y S++ G+ N + L+ LK R VDR ++ I C +G + A
Sbjct: 790 LTCY-SIILGICESNMLEIGLKILKA---FICRGVEVDRHTFNMLISKCCANGEINWAFD 845
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+ M G + D ++ + R +E+ ++ EM+ G P + + +L+GLC
Sbjct: 846 MVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLC 905
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R G++ TA +V+E+M I P + S +++AL + G AS+LL M+ ++P
Sbjct: 906 RVGDIKTAF-VVKEEM--IAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVP 962
Query: 483 DYLTWNSL--LICLSQQTTWLLLL--------LLNEMVSFVMVVHELSAK 522
++ +L L C + T L L L ++VS+ +++ L AK
Sbjct: 963 TIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAK 1012
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 209/489 (42%), Gaps = 35/489 (7%)
Query: 4 SIQSPP---DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
S+Q+ P D + T+I + ++ ++ V + + ++ P + S++ L ++
Sbjct: 603 SLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKG 662
Query: 61 IDLARAFYRKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ + K+ A G + + Y + G+ + GF M G+ + V
Sbjct: 663 KTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTT 722
Query: 120 NTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N +I + GK+ + L+ +M + PN T++IL+ Y K +++ + +L
Sbjct: 723 NAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMIL 782
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G +PD +T ++ +C + +EI G + LK +G +
Sbjct: 783 SGILPDKLTCYSIILGICES----NMLEI---------------GLKILKAFICRGVEVD 823
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
T+N+LIS C G ++ A D+ N M GIS + T D ++ L R + +L
Sbjct: 824 RHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLH 883
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
E SK+G Y +L GL R A ++M K+ P V S +
Sbjct: 884 --EMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 941
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G ++A M++ VP + + L+H +C+ V EA EL M+ G +
Sbjct: 942 CGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVS 1001
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG-FQSASMLL 472
+N +++GLC +G++ A +L EE R G L Y L+ + +G F ++L
Sbjct: 1002 YNVLITGLCAKGDMAIAFELFEEMKRD---GFLANVTTYKALVGGILSQGTEFSGTDIIL 1058
Query: 473 VQMVGKGIL 481
++ +G +
Sbjct: 1059 KDLLARGFI 1067
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 130/330 (39%), Gaps = 73/330 (22%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS----------------------W 269
C N ++ILI Y G++ +L++F M + G + W
Sbjct: 119 CNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVW 178
Query: 270 NFV-------------TYDTLIRGLCSGGRIDDGLKILQLMEDSKEG------------- 303
+F+ T++ LI LC+ G ++Q ME S
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 304 -SKGR-------------------ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
KGR + YN +++ L R N+ + L+ M K + P
Sbjct: 239 CKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNE 298
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + + GF +G V A++ ++M+ G PN V ++ LI + E +EA ++
Sbjct: 299 VTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHM 358
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G + ++ +L GLC+ A MR G G Y+ +I LC+
Sbjct: 359 MEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFY---MRMKRNGVCVGRITYTGMIDGLCK 415
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A ++L +M GI PD +T+++L+
Sbjct: 416 NGFLDEAVVMLNEMSKDGIDPDIVTYSALI 445
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 215/461 (46%), Gaps = 36/461 (7%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D Y++ IL+K C +++ + G P V +NTL+H LC +V A L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
M +PN VTF+ L+ C+E +V A+ LL++ G P+ +T +++ +C +G +
Sbjct: 74 HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 200 DAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNIL 242
A+ +L + E + G+ EM+ KG P++ TY+ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ +C +G A + +M + IS + VT+ LI L G ++ +LQ M S
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS-- 251
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-------------LFPRAVDRSLKIL 349
G + N++L GL + +ALE K M+K + P ++ I
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G +G +A+ +++M G VP+ V Y +I+ C++ R+ EA+++ M + P
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 371
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
TFNT+++G C+ G V L+L E R RG + + Y LI+ + G +
Sbjct: 372 NIVTFNTLITGYCKAGMVDDGLELFCEMGR---RGIVANAITYITLIRGFRKVGNINGSL 428
Query: 470 MLLVQMVGKGILPDYLTWNSLLICL-SQQTTWLLLLLLNEM 509
+ +M+ G+ PD +T ++L L S++ L +L E+
Sbjct: 429 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 194/433 (44%), Gaps = 48/433 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F T++ GL R + + V D + + P+ + +I+D + K D A
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK S ++ D Y+ ++ GL R D L M+ +G+ P+ V Y+ +I+ C
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+GK A+ L+ +M P+ VTFS LI A KE +L +A LL++ S G P+VV
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L+ LC G++ DA+E+ + Q + + F G P+V TYNILI
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFK--AMQKSMMDIDATHAF------NGVEPDVQTYNILI 310
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S G A +++ +M GI + VTY ++I GLC R+D+ ++ M G
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM-----G 365
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
SK P V + I G+C G V+D
Sbjct: 366 SK------------------------------SFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F +M G V N + Y LI + + + + ++ +EM G P T +L+GL
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455
Query: 424 QGNVGTALKLVEE 436
+ + AL ++EE
Sbjct: 456 KEELKRALAMLEE 468
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 42 MTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P + F+ +++ LVKE D++ A+ ++M++SGV + T L+ GLC + ++ D
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLL-QEMISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 101 FKLLHVMKS-----------RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
++ M+ GV+P+ YN LI L GK A L +M P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ VT+S +I CK+ L A + + S F P++VT ++ C G V D +E+
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
C EM R+G + N TY LI + + G ++ +LD+F +M
Sbjct: 397 ---------------C----EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
G+ + +T ++ GL S + L +L+ ++ S +
Sbjct: 438 GVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMD 474
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 236/509 (46%), Gaps = 32/509 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F ++R A ++ + D + + PSL+ N +L+ LV+ A +M
Sbjct: 151 FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+GV D++T AI+ K C RV + + M+ G++ N V Y+ ++ C G
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNA-LVLLEKSFSFGFVPDVVTITKV 188
AR ++ ++ PN VT+++L+ YCK+ + A V+ E + V D V +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ C GR+ DA + E + G +LG+++ + L+EME G
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ +YN LI YC G + A ++ M +G++ +TY+TL++G CS IDD L+
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ LM K G +++L GL++ + ++AL K+ L + + I G
Sbjct: 451 LWFLM--LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVING 508
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G + +A+ D+M E P+ + Y L YC+ ++ A+ LM +M G+ P
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568
Query: 411 ASTFNTVLSG--LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
FN+ ++G + +Q + + + +M RG P Y LI C++G A
Sbjct: 569 VEMFNSFITGHFIAKQWH---KVNDIHSEMS--ARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L +MV G+ P+ ++L+ C ++
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKE 652
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/526 (23%), Positives = 227/526 (43%), Gaps = 70/526 (13%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ T+I GL + + +V K + M P +N+++D +E + +AF +M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREG-SMRKAFEMCRM 419
Query: 73 MA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G+ TY L+KG C + + D +L +M RGV PN + +TL+ L K GK
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGK 479
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+A +L + N +TF+ +I CK + A LL++ PD +T
Sbjct: 480 TEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL----------------KEMERKG 231
+ + C +G++ A ++ + G V+ F+ EM +G
Sbjct: 540 LFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARG 599
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PN+ TY LI+ +C+ G L A +++ +M +G++ N L+ G++D+
Sbjct: 600 LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEAN 659
Query: 292 KILQLMEDSKEGSKGRISP------------------------YNSVLYGLYRENQQDEA 327
+LQ + + IS +N +++GL + + +A
Sbjct: 660 LVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719
Query: 328 LEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+ + ++ P S I G G++++A D M+ G PN++ Y+ LI+
Sbjct: 720 KSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYG 779
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ ++ A L ++ G P T+NT++ C++G A KL ++
Sbjct: 780 LCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK--------- 830
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ E+G + A LL QM+ + P+Y+T+ +L+
Sbjct: 831 -------------MVEEGYMEEAIKLLDQMIENNVDPNYITYCTLI 863
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 193/409 (47%), Gaps = 46/409 (11%)
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EP--------------N 146
LH+ + +P+ V + L+H L + + AR+L+S + EP +
Sbjct: 88 LHLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFS 147
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
V+F +L+ A+ L +AL + + G P + + ++L L
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLV------------- 194
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+SG+ G V G +M G LP+ T I+ +YC G + A++ +M+ G
Sbjct: 195 QSGDPGMAAMVYG------QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ N V Y ++ C G +D +IL+ ++ ++G + Y ++ G ++ + +E
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQ--RKGLSPNVVTYTLLVKGYCKDGRMEE 306
Query: 327 ALEYLKQMEKLFPRAVDR---SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A +K+M++ VD + I G+C G ++DA R ++M + G N+ +Y+ +I
Sbjct: 307 AERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMI 366
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIG 442
+ C+ R+ E ++++EM G P ++NT++ G CR+G++ A ++ +R G+
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLA 426
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+L Y+ L+K C A L M+ +G+ P+ ++ ++LL
Sbjct: 427 ATTLT----YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLL 471
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 193/465 (41%), Gaps = 76/465 (16%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ T+++G I+D ++ L+ + + P+ +++LD L K K+ +
Sbjct: 432 YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETL 491
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A G+ + T+ ++ GLC R+ + +LL MK P+S+ Y TL CK G++G
Sbjct: 492 ARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLG 551
Query: 134 RARSLMSDMEE---------------------------------------PNDVTFSILI 154
A LM+ ME PN VT+ LI
Sbjct: 552 TATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALI 611
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
+CKE NL A L + + G P+V + ++ G+V +A +L++ +
Sbjct: 612 AGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMI 671
Query: 215 GKVKGGCRFLKEMERKGCLPNVDT------------YNILISSYCETGVLDSALDVFNDM 262
GC + +E VDT +N++I C++G + A +F +
Sbjct: 672 P----GCS-ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESL 726
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + TY +LI G + G ID+ + +M + G I YNS++YGL +
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSA--GLTPNIITYNSLIYGLCKSG 784
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN----------------VEDAKRCF 364
+ A+ +++ + P + + I +C +G +E+A +
Sbjct: 785 KLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLL 844
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
DQMIE PN + Y LIH Y + + E S+L EM G LP
Sbjct: 845 DQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 162/407 (39%), Gaps = 82/407 (20%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
++ PPD + T+ G + + + + PS+++FNS + +A
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF-----IA 582
Query: 65 RAFYR-----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ +++ +M A G+ + TY L+ G C + + L M + G+ PN I
Sbjct: 583 KQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC 642
Query: 120 NTLIHSLCKNGKVGRARSLMSDM------------------------------EEPNDVT 149
+ L+ K GKV A ++ + +V
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM 702
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++++I CK + +A L E + F+PD T + ++ + G + +A + +
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD--- 759
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
M G PN+ TYN LI C++G L A+++FN ++ GIS
Sbjct: 760 ----------------VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP 803
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N +TY+TLI C G+ + K+ Q M + E +EA++
Sbjct: 804 NGITYNTLIDEYCKEGKTTEAFKLKQKMVE---------------------EGYMEEAIK 842
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L QM + P + I G+ GN+E+ + +D+M G +P
Sbjct: 843 LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 889
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 236/509 (46%), Gaps = 32/509 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F ++R A ++ + D + + PSL+ N +L+ LV+ A +M
Sbjct: 151 FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMR 210
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+GV D++T AI+ K C RV + + M+ G++ N V Y+ ++ C G
Sbjct: 211 IAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTE 270
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNA-LVLLEKSFSFGFVPDVVTITKV 188
AR ++ ++ PN VT+++L+ YCK+ + A V+ E + V D V +
Sbjct: 271 DARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMM 330
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
+ C GR+ DA + E + G +LG+++ + L+EME G
Sbjct: 331 INGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGM 390
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ +YN LI YC G + A ++ M +G++ +TY+TL++G CS IDD L+
Sbjct: 391 RPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALR 450
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ LM K G +++L GL++ + ++AL K+ L + + I G
Sbjct: 451 LWFLM--LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVING 508
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G + +A+ D+M E P+ + Y L YC+ ++ A+ LM +M G+ P
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568
Query: 411 ASTFNTVLSG--LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
FN+ ++G + +Q + + + +M RG P Y LI C++G A
Sbjct: 569 VEMFNSFITGHFIAKQWH---KVNDIHSEMS--ARGLSPNLVTYGALIAGWCKEGNLHEA 623
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L +MV G+ P+ ++L+ C ++
Sbjct: 624 CNLYFEMVNNGMNPNVFICSALMSCFYKE 652
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 221/518 (42%), Gaps = 58/518 (11%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ T+I GL + + +V K + M P +N+++D +E + +AF +M
Sbjct: 361 VYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREG-SMRKAFEMCRM 419
Query: 73 MA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G+ TY L+KG C + + D +L +M RGV PN + +TL+ L K GK
Sbjct: 420 MVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGK 479
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+A +L + N +TF+ +I CK + A LL++ PD +T
Sbjct: 480 TEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRT 539
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ + C +G++ A ++ +ME G P+V+ +N I+ +
Sbjct: 540 LFDGYCKLGQLGTATHLM-------------------NKMEHLGFAPSVEMFNSFITGHF 580
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
D+ ++M G+S N VTY LI G C G + + + E G
Sbjct: 581 IAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLY--FEMVNNGMNPN 638
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKL---------------FPRAVDR-------- 344
+ ++++ Y+E + DEA L+++ + VD
Sbjct: 639 VFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHS 698
Query: 345 -----SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
++ I G C G + DAK F+ + + +P+ Y LIH + EA L
Sbjct: 699 ANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLR 758
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
M G P T+N+++ GLC+ G + A+ L + +G P Y+ LI
Sbjct: 759 DVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQ---SKGISPNGITYNTLIDEY 815
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C++G A L +MV +GI P +T++ L+ L Q
Sbjct: 816 CKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 193/409 (47%), Gaps = 46/409 (11%)
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EP--------------N 146
LH+ + +P+ V + L+H L + + AR+L+S + EP +
Sbjct: 88 LHLFRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDFTFS 147
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
V+F +L+ A+ L +AL + + G P + + ++L L
Sbjct: 148 AVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLV------------- 194
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+SG+ G V G +M G LP+ T I+ +YC G + A++ +M+ G
Sbjct: 195 QSGDPGMAAMVYG------QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMG 248
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ N V Y ++ C G +D +IL+ ++ ++G + Y ++ G ++ + +E
Sbjct: 249 LEVNLVAYHAVMDCYCGMGWTEDARRILESLQ--RKGLSPNVVTYTLLVKGYCKDGRMEE 306
Query: 327 ALEYLKQMEKLFPRAVDR---SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A +K+M++ VD + I G+C G ++DA R ++M + G N+ +Y+ +I
Sbjct: 307 AERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMI 366
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIG 442
+ C+ R+ E ++++EM G P ++NT++ G CR+G++ A ++ +R G+
Sbjct: 367 NGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLA 426
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+L Y+ L+K C A L M+ +G+ P+ ++ ++LL
Sbjct: 427 ATTLT----YNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLL 471
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 173/407 (42%), Gaps = 63/407 (15%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
++ PPD + T+ G + + + + PS+++FNS + +A
Sbjct: 528 LRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHF-----IA 582
Query: 65 RAFYR-----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ +++ +M A G+ + TY L+ G C + + L M + G+ PN I
Sbjct: 583 KQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFIC 642
Query: 120 NTLIHSLCKNGKVGRARSLMSDM------------------------------EEPNDVT 149
+ L+ K GKV A ++ + +V
Sbjct: 643 SALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVM 702
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++++I CK + +A L E + F+PD T + ++ + G + +A + +
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD--- 759
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
M G PN+ TYN LI C++G L A+++FN ++ GIS
Sbjct: 760 ----------------VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISP 803
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N +TY+TLI C G+ + K+ Q M + EG + + Y+ ++YGL + +EA++
Sbjct: 804 NGITYNTLIDEYCKEGKTTEAFKLKQKMVE--EGIQPTVITYSILIYGLCTQGYMEEAIK 861
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L QM + P + I G+ GN+E+ + +D+M G +P
Sbjct: 862 LLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/442 (26%), Positives = 206/442 (46%), Gaps = 35/442 (7%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D Y++ IL+K C +++ + G P V +NTL+H LC +V A L
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
M +PN VTF+ L+ C+E +V A+ LL++ G P+ +T +++ +C +G +
Sbjct: 74 HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 200 DAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNIL 242
A+ +L + E + G+ EM+ KG P++ TY+ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ +C +G A + +M + IS + VT+ LI L G ++ +LQ M S
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISS-- 251
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-------------LFPRAVDRSLKIL 349
G + N++L GL + +ALE K M+K + P ++ I
Sbjct: 252 GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILIS 311
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G +G +A+ +++M G VP+ V Y +I+ C++ R+ EA+++ M + P
Sbjct: 312 GLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSP 371
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
TFNT+++G C+ G V L+L E R RG + + Y LI+ + G +
Sbjct: 372 NIVTFNTLITGYCKAGMVDDGLELFCEMGR---RGIVANAITYITLIRGFRKVGNINGSL 428
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
+ +M+ G+ PD +T ++L
Sbjct: 429 DIFQEMISSGVYPDTITIRNML 450
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 194/433 (44%), Gaps = 48/433 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F T++ GL R + + V D + + P+ + +I+D + K D A
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK S ++ D Y+ ++ GL R D L M+ +G+ P+ V Y+ +I+ C
Sbjct: 139 LRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFC 198
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+GK A+ L+ +M P+ VTFS LI A KE +L +A LL++ S G P+VV
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L+ LC G++ DA+E+ + Q + + F G P+V TYNILI
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFK--AMQKSMMDIDATHAF------NGVEPDVQTYNILI 310
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S G A +++ +M GI + VTY ++I GLC R+D+ ++ M G
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM-----G 365
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
SK P V + I G+C G V+D
Sbjct: 366 SK------------------------------SFSPNIVTFNTLITGYCKAGMVDDGLEL 395
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F +M G V N + Y LI + + + + ++ +EM G P T +L+GL
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455
Query: 424 QGNVGTALKLVEE 436
+ + AL ++EE
Sbjct: 456 KEELKKALAMLEE 468
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 42 MTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P + F+ +++ LVKE D++ A+ ++ M++SGV + T L+ GLC + ++ D
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQE-MISSGVCPNVVTCNTLLDGLCDSGKLKDA 276
Query: 101 FKLLHVMKS-----------RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
++ M+ GV+P+ YN LI L GK A L +M P
Sbjct: 277 LEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 336
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ VT+S +I CK+ L A + + S F P++VT ++ C G V D +E+
Sbjct: 337 DTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
C EM R+G + N TY LI + + G ++ +LD+F +M
Sbjct: 397 ---------------C----EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS 437
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
G+ + +T ++ GL S + L +L+ ++ S +
Sbjct: 438 GVYPDTITIRNMLTGLWSKEELKKALAMLEELQMSMD 474
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 233/512 (45%), Gaps = 44/512 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PDE + +I G R I+D V+ D + R + +L I NS+++ K +I A
Sbjct: 296 PDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGV 355
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ ++ D Y+Y L+ G C + F L M G++P + YNTL+ LC
Sbjct: 356 I-TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLC 414
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + M + P++V +S L+ K EN A L + + GF +
Sbjct: 415 RVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRI 474
Query: 184 TITKVLELLCSVGRVMDAVEILEE----------------------SGEQGRLGKVKGGC 221
T ++ LC +G++++A EI ++ + G+ KVKG
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGA- 533
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
MER+ P+++ YN LIS ++ L D+ +M I G++ N VTY LI G
Sbjct: 534 -----MEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 588
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFP 339
C G +D E ++ G I ++++ GLYR + DEA +++M FP
Sbjct: 589 CKEGMLDKAFS--SYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFP 646
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
D + ++ D+ + +PN ++Y+ I C+ +V +A
Sbjct: 647 ---DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFF 703
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
++ G++P T+ T++ G GNV A +L +E +R RG +P Y+ LI L
Sbjct: 704 SMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR---RGLVPNIVTYNALINGL 760
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+ A L ++ KG+ P+ +T+N+L+
Sbjct: 761 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 792
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 228/492 (46%), Gaps = 28/492 (5%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
++F +++ + + + D + + PSL+ NS+L+ LVK + ++
Sbjct: 123 TVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 182
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D + +I++ C +V + + M++ GV+PN V Y++LI+ G
Sbjct: 183 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 242
Query: 132 VGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNA-LVLLEKSFSFGFVPDVVTIT 186
V A+ ++ M E N VT+++LI YCK+ + A VL VPD
Sbjct: 243 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRFLKEMERKGCL------ 233
+++ C G++ DAV +L+E G + G C+ + E +G +
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362
Query: 234 ---PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+ +YN L+ YC G A ++ + M +GI +TY+TL++GLC G DD
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYR-ENQQDEALEYLKQMEKLFPRA-VDRSLKI 348
L+I LM K G Y+++L GL++ EN + + + + + F ++ + + I
Sbjct: 423 LQIWHLM--MKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 480
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G + +A+ FD+M + G P+ + Y LI YC+ V +A ++ M
Sbjct: 481 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS 540
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +N+++SGL + + L+ E GI RG P Y LI C++G A
Sbjct: 541 PSIEMYNSLISGLFKSRRLVEVTDLLTE--MGI-RGLTPNIVTYGALIDGWCKEGMLDKA 597
Query: 469 SMLLVQMVGKGI 480
+M G+
Sbjct: 598 FSSYFEMTENGL 609
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 206/435 (47%), Gaps = 40/435 (9%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V DD A+L + L L GF V K + +PN Y L+H L + R
Sbjct: 31 VFSDDIVDAVL-RNLRLNPTASLGF-FQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETR 88
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLV-NALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+ ++ + + +C + N++ + LV + + F+F P V + +L++
Sbjct: 89 AYLNQLVD---------LCKFKDRGNVIWDELVGVYREFAFS--PTVFDM--ILKVYVEK 135
Query: 196 GRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTY 239
G +A+ + + G+ GR+ G+ ++M R G +P+V
Sbjct: 136 GLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMV 195
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+I+++++C+ G +D A M+ G+ N VTY +LI G S G ++ +L+ M
Sbjct: 196 SIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFM-- 253
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGN 356
S++G + Y ++ G ++ + DEA + L+ M++ L P + I G+C G
Sbjct: 254 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGK 313
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++DA R D+M+ G N+ I + LI+ YC+ + EA ++ M P + ++NT
Sbjct: 314 IDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNT 373
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L G CR+G+ A L ++ ++ G P Y+ L+K LC G F A + M+
Sbjct: 374 LLDGYCREGHTSEAFNLCDKMLQ---EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM 430
Query: 477 GKGILPDYLTWNSLL 491
+G+ PD + +++LL
Sbjct: 431 KRGVAPDEVGYSTLL 445
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 178/388 (45%), Gaps = 23/388 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PDE + T++ GL + D+++R T S FN+++ L K +
Sbjct: 436 PDEVGYSTLLDGLFKMENFEGASTLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEE 494
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G D TY L+ G C + VG FK+ M+ + P+ +YN+LI L
Sbjct: 495 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 554
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ ++ L+++M PN VT+ LI +CKE L A + G +++
Sbjct: 555 KSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANII 614
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------------RLGKVKGGCRFLKEMERK 230
+ ++ L +GR+ +A ++++ + G R ++ L E +
Sbjct: 615 ICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKT 674
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
LPN YNI I+ C+TG +D A F+ + + G + TY TLI G + G +D+
Sbjct: 675 FLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA 734
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
++ M + G I YN+++ GL + D A ++ + LFP V + I
Sbjct: 735 FRLRDEM--LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 792
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
G+C GN++ A + D+MIEEG P++
Sbjct: 793 DGYCKIGNMDAAFKLKDKMIEEGISPSI 820
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 185/424 (43%), Gaps = 29/424 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + T+++GL R +D ++ L+ + + P ++++LD L K E+ + A
Sbjct: 401 PTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTL 460
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K ++A G T+ ++ GLC ++ + ++ MK G P+ + Y TLI C
Sbjct: 461 W-KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYC 519
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K VG+A + ME P+ ++ LI K LV LL + G P++V
Sbjct: 520 KASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIV 579
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ C G + A E E G RLG++ +++M
Sbjct: 580 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 639
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P+ + + + S + D ++ + N + Y+ I GLC G++
Sbjct: 640 VDHGFFPDHECF---LKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 696
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
DD + ++ S +G Y ++++G DEA +M + L P V +
Sbjct: 697 DDARRFFSML--SLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYN 754
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C NV+ A+R F ++ ++G PNVV Y+ LI YC+ + A +L +M
Sbjct: 755 ALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814
Query: 406 GYLP 409
G P
Sbjct: 815 GISP 818
>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 669
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 207/434 (47%), Gaps = 33/434 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G C + R+ D L+ M V P++ YNT++ LC + +A LM +M
Sbjct: 180 TYTALINGYCRSGRLADALNLIASMP---VAPDTYTYNTVLKGLCGAKQWEKAEELMEEM 236
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
PN+VTF+ I ++C+ L +A+ LLE+ +G PDVV + ++ GRV
Sbjct: 237 IRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRV 296
Query: 199 MDAVEILE----ESGEQGRLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISS 245
DA+ +L + +KG C + EM RK C PN T+++L S
Sbjct: 297 DDALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSC 356
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G++D A++V M+ G + V Y+TLI GR+DD L +L DS +
Sbjct: 357 LCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLL----DSMLCNP 412
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
IS +N+ L L R + + E + QM + ++ + IL C G V A
Sbjct: 413 DTIS-FNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEV 471
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F+QM + P++V Y LI+ + ++ V A EL + M P ++N VL GLCR
Sbjct: 472 FEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCK---PDIFSYNAVLKGLCR 528
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
A +L+ R + P ++ LI +LC+KG A + QM G PD
Sbjct: 529 AARWEDAGELIANMAR---KDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPD 585
Query: 484 YLTWNSLLICLSQQ 497
T+N+L+ S+Q
Sbjct: 586 IFTYNALINGFSEQ 599
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 191/418 (45%), Gaps = 41/418 (9%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
IL+K LC R+ D ++L +K G ++V +NTL+ C++G++ A ++ +
Sbjct: 115 ILIKKLCAHRRLADAERVLDALKESG-SADAVSHNTLVAGYCRDGRLADAERVLEAAKVS 173
Query: 144 -EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
N VT++ LI YC+ L +AL L+ S PD T VL+ LC + A
Sbjct: 174 GAANVVTYTALINGYCRSGRLADALNLIA---SMPVAPDTYTYNTVLKGLCGAKQWEKAE 230
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E++E EM R C PN T+ I S+C+ G+LD A+ + M
Sbjct: 231 ELME-------------------EMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERM 271
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + + V Y TL+ G GR+DD L +L M K YN+ L GL
Sbjct: 272 PRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML-----CKPNTVCYNAALKGLCMAE 326
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ + E + +M + P S+ C G V+ A +QM + G P+VVIY+
Sbjct: 327 RWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYN 386
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI+ + ++ RV +A L+ M + P +FN L LCR VEE +
Sbjct: 387 TLINYFSEQGRVDDALMLLDSMLCN---PDTISFNAALKALCRTERWYD----VEELIAQ 439
Query: 441 IGRGSLP-GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ R P ++ LI +LC+ G A + QM PD +T++SL+ S+Q
Sbjct: 440 MLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQ 497
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 129/510 (25%), Positives = 221/510 (43%), Gaps = 69/510 (13%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PD + TV++GL A+ + + + R N P+ F + + + +
Sbjct: 203 SMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLD 262
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++M G D Y+ L+ G RV D LL+ M KPN+V YN +
Sbjct: 263 HAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAAL 319
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC + L+++M PN+ TFS+L C+ + A+ ++E+ +G
Sbjct: 320 KGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCR 379
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILE----ESGEQGRLGKVKGGCR---------FLKE 226
PDVV ++ GRV DA+ +L+ +K CR + +
Sbjct: 380 PDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQ 439
Query: 227 MERKGCLPNVD-TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
M R+ C P ++ T+NILI S C+ G+++ A++VF M + + VTY +LI G G
Sbjct: 440 MLREDC-PLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQG 498
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
++ +++ Q M K I YN+VL GL R + ++A E + M +
Sbjct: 499 LVESAIELFQSMP-----CKPDIFSYNAVLKGLCRAARWEDAGELIANMAR--------- 544
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
K C PN + ++ LI++ CQ+ A E+ K+M +
Sbjct: 545 ---------------KDC---------PPNEITFNILINSLCQKGFADRAIEVFKQMPEY 580
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+N +++G QG + AL L+ P + Y+ +K LC +
Sbjct: 581 GSTPDIFTYNALINGFSEQGRLDDALNLLST------MSCKPDAISYNSTLKGLCRAERW 634
Query: 466 QSASMLLVQMVGKGILPDYLTW---NSLLI 492
+ A ++ +M+ K P+ +T+ N L I
Sbjct: 635 KEAEEIVAEMLRKKCPPNEVTFKYANQLFI 664
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 40/339 (11%)
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
++A + L S P V+ +++ LC+ R+ DA +L+ E G V
Sbjct: 92 LDAALRLVGSMPSSEPPAVIACNILIKKLCAHRRLADAERVLDALKESGSADAV------ 145
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++N L++ YC G L A V K+ G + N VTY LI G C
Sbjct: 146 --------------SHNTLVAGYCRDGRLADAERVLEAAKVSGAA-NVVTYTALINGYCR 190
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GR+ D L ++ M + + YN+VL GL Q ++A E +++M P
Sbjct: 191 SGRLADALNLIASMPVAPDTYT-----YNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNE 245
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + +I FC +G ++ A + ++M G P+VVIY L++ + ++ RV +A L+
Sbjct: 246 VTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNT 305
Query: 402 MTGHGYLPIASTFNTVLSGLC---RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M P +N L GLC R +VG +L+ E +R + P +S L
Sbjct: 306 MLCK---PNTVCYNAALKGLCMAERWKDVG---ELIAEMVR---KDCPPNEATFSMLTSC 356
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LC+ G A ++ QM G PD + +N+L+ S+Q
Sbjct: 357 LCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQ 395
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 241/523 (46%), Gaps = 77/523 (14%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKM 72
F V+ RA + D +K L+ R + P+L I N+ +DV V+ + L +A + ++M
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRAN-RLEKALRFLERM 303
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ + TY +++G C +RV + +LL M S+G P+ V Y T++ LCK ++
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R LM M + P+ VT++ LI K ++ AL L+ + GF D + +
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ LC GR+ +A +++ E C P+V TY +++ +C
Sbjct: 424 IVHALCKEGRMSEAKDLINEM----------------------DCPPDVVTYTAVVNGFC 461
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG--SK 305
G +D A + M G N V+Y L+ G+C G+ L+ ++M S+E S
Sbjct: 462 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGK---SLEAREMMNMSEEHWWSP 518
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
I+ Y+ +++GL RE + EA + +++M + FP V+ +L + C DG +A++
Sbjct: 519 NSIT-YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 577
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEE--------------------------------- 390
++ + +G NVV + +IH +CQ +
Sbjct: 578 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 637
Query: 391 --RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
R+ EA+ELMK+M G P T+ TV+ C+ G V + ++E + I R
Sbjct: 638 KGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILE---KMISRQKC-- 692
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +I+ LC G + A LL +++ D T +L+
Sbjct: 693 RTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALM 735
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 227/499 (45%), Gaps = 33/499 (6%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
V+R R+ D R+ P ++ S+L+VL K + M
Sbjct: 179 AVLRSQDDERVALKFFYWADRQWRYRHDPM--VYYSMLEVLSKTKLCQGSRRVLVLMKRR 236
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ ++ +M ++ D K+L +M+ GV+PN +I NT I + ++ +A
Sbjct: 237 GIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 296
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ M+ PN VT++ +I YC + A+ LLE S G +PD V+ ++
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356
Query: 192 LCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLP 234
LC R+++ +++++ ++ L FLK+ + KG
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+ Y+ ++ + C+ G + A D+ N+M + VTY ++ G C G +D K+L
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMDCPP---DVVTYTAVVNGFCRLGEVDKAKKLL 473
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFC 352
Q+M G K Y ++L G+ R + EA E + E+ + P ++ S+ + G
Sbjct: 474 QVMH--THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLR 531
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+G + +A +M+ +G P V + L+ + C++ R EA + M+E G
Sbjct: 532 REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVV 591
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
F TV+ G C+ + AL ++ +DM I + + + Y+ L+ L +KG A+ L+
Sbjct: 592 NFTTVIHGFCQNDELDAALSVL-DDMYLINKHADVFT--YTTLVDTLGKKGRIAEATELM 648
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M+ KGI P +T+ +++
Sbjct: 649 KKMLHKGIDPTPVTYRTVI 667
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 213/526 (40%), Gaps = 107/526 (20%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVK 58
HS PD+ + T++ L + + I V+ DL+ + + P +N+++ +L K
Sbjct: 339 HSKGCLPDKVSYYTIMGYLCKEKRI---VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD------------------- 99
D ++ K G + D Y+ ++ LC R+ +
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVTYTA 455
Query: 100 ---GF----------KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
GF KLL VM + G KPN+V Y L++ +C+ GK AR +M+ EE
Sbjct: 456 VVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 515
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
PN +T+S+++ +E L A ++ + GF P V I +L+ LC GR +A
Sbjct: 516 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 575
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+F++E KGC NV + +I +C+ LD+AL V +DM
Sbjct: 576 -------------------KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 616
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + TY TL+ L G KGRI+
Sbjct: 617 YLINKHADVFTYTTLVDTL---------------------GKKGRIA------------- 642
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
EA E +K+M + + P V I +C G V+D ++MI IY+
Sbjct: 643 ---EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR--TIYN 697
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+I C ++ EA L+ ++ A T ++ G ++G +A K+ R
Sbjct: 698 QVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVA---CRM 754
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG-ILPDYL 485
R +P L K L KG A L++++V +G I P L
Sbjct: 755 FNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSL 800
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
LC G R ++L LM+ + G ++ V+ R Q +AL+ L M++
Sbjct: 222 LCQGSR-----RVLVLMK--RRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRA--- 271
Query: 341 AVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
V+ +L I +D +E A R ++M G VPNVV Y+C+I YC RV EA
Sbjct: 272 GVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEA 331
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL+++M G LP ++ T++ LC++ + L+++ + G +P Y+ L
Sbjct: 332 IELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK--EHGLVPDQVTYNTL 389
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
I L + A L KG D L +++++ L ++
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 219/471 (46%), Gaps = 45/471 (9%)
Query: 44 PSLKIFNS-ILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P+ ++N IL L + +DL A Y K ++ SG Q D +T +L++ LC R+ +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALY-KDLLLSGAQPDVFTRNLLLQALCDAGRMELAQR 166
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEEN 162
+ M +R N + L C+ G+ A ++ M N V + ++ +CKE
Sbjct: 167 VFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGL 222
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A L+E+ G P+VVT + LC GRV+DA I ++ E + G +
Sbjct: 223 VEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPR---- 278
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
P+ T+++++S +C+ G +D A + + M+ G +Y+ + GL
Sbjct: 279 -----------PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--LEYLKQMEKLFPR 340
GR+ + ++L+ M + EG + YN ++ GL +E + +A +E + + P
Sbjct: 328 RNGRVGEAQELLREM--AHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPD 385
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V + + +C GN+ A R D+M ++G PN Y+ L+ + + R EA L++
Sbjct: 386 VVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLE 445
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV----EEDMRGIGR------------- 443
M GY + N ++ GLCR + A+ +V EE +GR
Sbjct: 446 RMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSS 505
Query: 444 ---GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP YS LI ALC++G F A L++M+ K I PD + +++ +
Sbjct: 506 ISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFI 556
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 220/486 (45%), Gaps = 46/486 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMM 73
TV+ G + ++ + + + + + P++ FN+ + L K +D R F + M
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIF--QDMQ 269
Query: 74 ASGVQG----DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
G D T+ +++ G C V + L+ +M+ G YN + L +N
Sbjct: 270 EDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+VG A+ L+ +M +PN T++I++ CKE +A + S PDVVT
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +L CS G + A IL+E M +KGC PN TYN+L+ S
Sbjct: 390 TSLLHAYCSKGNIAAANRILDE-------------------MAQKGCAPNSFTYNVLLQS 430
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
G A + M G S + + +I GLC R+D + I+ M + G+
Sbjct: 431 LWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGAL 490
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
GR+ NS L + D ++ ++ P + S+ I C +G ++AK+
Sbjct: 491 GRLG--NSFLSVV-----SDSSIS-----QRCLPDQITYSILISALCKEGRFDEAKKKLL 538
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+MI + P+ VIYD IH YC+ + A +++++M G P T+N ++ G +
Sbjct: 539 EMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKH 598
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+KL+ E +G P Y+ LIK+ C++G A LL +M+ ++P+
Sbjct: 599 KSEEIMKLMSEMKE---KGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNIT 655
Query: 486 TWNSLL 491
+++ L+
Sbjct: 656 SFDLLI 661
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 169/375 (45%), Gaps = 47/375 (12%)
Query: 134 RARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
R+ ++ P ++ LI A +E L L + G PDV T +L+ LC
Sbjct: 97 RSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALC 156
Query: 194 SVGRVMDAVEILEESGEQGRLG---KVKGGCRFLKEMERKGCLPNVDTYNILI-----SS 245
GR+ A + + + +G CR + ++ L + + N+++ +
Sbjct: 157 DAGRMELAQRVFDAMPARNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAG 216
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+++ A + M++ G++ N VT++ I LC GR+ D +I Q M++ +
Sbjct: 217 FCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQ--- 273
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+GL R +Q V + + GFC G V++A+ D
Sbjct: 274 ----------HGLPRPDQ------------------VTFDVMLSGFCDAGFVDEARVLVD 305
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M G + V Y+ + + RV EA EL++EM G P + T+N ++SGLC++G
Sbjct: 306 IMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEG 365
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A + VE +R G S P Y+ L+ A C KG +A+ +L +M KG P+
Sbjct: 366 KAFDA-RRVENFIRS-GVMS-PDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSF 422
Query: 486 TWNSLLICLSQQTTW 500
T+N LL Q+ W
Sbjct: 423 TYNVLL-----QSLW 432
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/503 (23%), Positives = 197/503 (39%), Gaps = 101/503 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL + D + + + M+P + + S+L + A
Sbjct: 349 PNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRI 408
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G + +TY +L++ L R + +LL M +G ++ N +I LC+
Sbjct: 409 LDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCR 468
Query: 129 NGKVGRARSLMSDMEE---------------------------PNDVTFSILICAYCKEE 161
N ++ A ++ M E P+ +T+SILI A CKE
Sbjct: 469 NSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEG 528
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC 221
A L + PD V + C G+ A+++L
Sbjct: 529 RFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL---------------- 572
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
++ME+KGC P+ TYN+LI + E + + + ++MK GIS N +TY++LI+
Sbjct: 573 ---RDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSF 629
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C G ++ + +L DE L+ +L P
Sbjct: 630 CQQGMVNKAMPLL------------------------------DEMLQ-----NELVPNI 654
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE----ERVREASE 397
L I +C + A+ FD + G V+ CL+ C E + EA
Sbjct: 655 TSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLY--CLM---CTELTTYGKWIEAKN 709
Query: 398 LMKEMTGHGYLPIAS-TFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYS 453
++ EM + I S + ++SGLC G V A LKL+ I + L +
Sbjct: 710 IL-EMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLL------IAKRHLFDPAAFM 762
Query: 454 PLIKALCEKGGFQSASMLLVQMV 476
P+I AL ++G Q ML +M+
Sbjct: 763 PVIDALGDRGKKQDVDMLSAKMM 785
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 240/512 (46%), Gaps = 33/512 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP + V+R R+ + D R++ P ++ ++LDVL K +
Sbjct: 167 PP---LVCAVLRSQADERVALNFFYWADRQWRYSHHPV--VYYTMLDVLSKTKLCQGARR 221
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G++ + +M ++ + ++L +M+ GV+P+ I NT I+ L
Sbjct: 222 VLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLV 281
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ +A + M+ +P+ VT++ LI YC + +AL L+ S G PD V
Sbjct: 282 KGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKV 341
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKE 226
+ V+ LC ++ + ++E+ L G FLKE
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 401
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ KG + Y+ ++ S+C+ G +D A + DM G + + VTY ++ G C GR
Sbjct: 402 AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGR 461
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDR 344
ID+ KILQ M K G K Y ++L GL + EA E + E+ + P A+
Sbjct: 462 IDEAKKILQQM--YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITY 519
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ G +G + +A +M+E+G P V + LI + CQ ++V EA + ++E
Sbjct: 520 GAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLN 579
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G F TV+ G C+ G++ AL ++ +DM G+ P + Y+ L AL +KG
Sbjct: 580 KGCAINVVNFTTVIHGFCQIGDMEAALSVL-DDMYLSGKH--PDAVTYTALFDALGKKGR 636
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
A+ L+V+M+ KG+ P +T+ S++ SQ
Sbjct: 637 LDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQ 668
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 234/482 (48%), Gaps = 35/482 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
I+ PP+ F V+ RA + + ++ L+ + + PSL I N+ + VLVK L
Sbjct: 231 IECPPEA--FGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGG-KLE 287
Query: 65 RAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+A + ++M +G++ D TY L+KG C NR+ D +L+ + S+G P+ V Y T++
Sbjct: 288 KALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVM 347
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LCK K+ + LM M P+ VT++ LI K + +AL L+++ GF
Sbjct: 348 GFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGF 407
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
D V + ++ C GR+ +A + + +M +GC P+V T
Sbjct: 408 HIDKVGYSAIVHSFCQKGRMDEAKSL-------------------VIDMYSRGCNPDVVT 448
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y ++ +C G +D A + M G N V+Y L+ GLC G+ + +++ + E
Sbjct: 449 YTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSE 508
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGN 356
+ + I+ Y +V++GL RE + EA + ++M EK FP V+ +L I C +
Sbjct: 509 EH-WWTPNAIT-YGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQK 566
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V +AK+ ++ + +G NVV + +IH +CQ + A ++ +M G P A T+
Sbjct: 567 VVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTA 626
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ L ++G + A +L+ ++ + +G P Y +I + G LL +M+
Sbjct: 627 LFDALGKKGRLDEAAELI---VKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKML 683
Query: 477 GK 478
+
Sbjct: 684 KR 685
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 201/462 (43%), Gaps = 34/462 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDV-VKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
PPD+ + TV+ L + + I +V +V N+ P +N+++ +L K D A
Sbjct: 337 PPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDAL 396
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
AF K+ G D Y+ ++ C R+ + L+ M SRG P+ V Y ++
Sbjct: 397 AFL-KEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDG 455
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ G++ A+ ++ M + PN V+++ L+ C + A ++ S + P+
Sbjct: 456 FCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPN 515
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLK 225
+T V+ L G++ +A ++ E E+G KV ++L+
Sbjct: 516 AITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLE 575
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
E KGC NV + +I +C+ G +++AL V +DM + G + VTY L L G
Sbjct: 576 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKG 635
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
R+D+ +++ M +G Y SV++ + + D+ L L++M K P +
Sbjct: 636 RLDEAAELIVKM--LSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYN 693
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I C GN+E+A++ +++ + L+ +Y ++ A ++ M
Sbjct: 694 QVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRR 753
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEED---MRGIGRG 444
P V L G KLVE D +R + RG
Sbjct: 754 NLTPDLKLCEKVSKKLVLDG------KLVEADNLMLRFVERG 789
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 205/422 (48%), Gaps = 34/422 (8%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G Q + +Y L+ GLC KLL +++ R +P+ V+YNT+I LC
Sbjct: 224 FHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLC 283
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A ++M P+ +T+S LIC +C L+ A LL + PDV
Sbjct: 284 KDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVY 343
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +++ LC + GK+K L M ++G PNV TY+ L+
Sbjct: 344 TYTILIDALC-------------------KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLM 384
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G + +A +F+ M ++ + +Y+ +I GLC G +D+ + +L+ E +
Sbjct: 385 DGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLR--EMLHKN 442
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GFCVDGNVEDAK 361
YNS++ GL + + AL+ +K++ + P V +L G C + N++ A
Sbjct: 443 VVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAI 502
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M E G PN Y LI C+ R++ A +L + + G T+N ++ GL
Sbjct: 503 ALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGL 562
Query: 422 CRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C++G + AL + ED G +P + + +I++L EK A LL +M+ KG
Sbjct: 563 CKEGMLDEALAMKSKMED-----NGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617
Query: 480 IL 481
+L
Sbjct: 618 LL 619
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 220/477 (46%), Gaps = 38/477 (7%)
Query: 27 INDVVKATDLVSRFN------MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGD 80
I+DVV D VS+FN TPS+ F IL LVK K+M G++ D
Sbjct: 109 IHDVVH--DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPD 166
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----R 136
T +IL+ C ++ F +L + G +PN++I TL+ LC G+V ++
Sbjct: 167 LVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHD 226
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
+++ + N V++ L+ CK A+ LL PDVV +++ LC
Sbjct: 227 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDK 286
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
V +A + F EM +G P+V TY+ LI +C G L A
Sbjct: 287 LVNEAYD-------------------FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAF 327
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL- 315
+ N+M + I+ + TY LI LC G++ + +L +M +KEG K + Y++++
Sbjct: 328 SLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM--TKEGVKPNVVTYSTLMD 385
Query: 316 -YGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
Y L E + + + ++ P ++ I G C +V++A +M+ + VP
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
N V Y+ LI C+ R+ A +LMKE+ G T+ ++L GLC+ N+ A+ L
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF 505
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
M+ RG P Y+ LI LC+ ++A L ++ KG D T+N ++
Sbjct: 506 ---MKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMI 559
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 183/407 (44%), Gaps = 64/407 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
PD ++ T+I GL + +++N+ A D + N + P + +++++ +
Sbjct: 270 PDVVMYNTIIDGLCKDKLVNE---AYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+M + D YTY IL+ LC ++ + LL VM GVKPN V Y+TL+
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C G+V A+ + M + P+ +++I+I CK +++ A+ LL + VP+
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPN 446
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VT +++ LC GR+ A+++ +KE+ +G +V TY
Sbjct: 447 TVTYNSLIDGLCKSGRITSALDL-------------------MKELHHRGQPADVITYTS 487
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ C+ LD A+ +F MK GI N TY LI GLC G R+ + K+ Q +
Sbjct: 488 LLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHI--LV 545
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+G + YN ++ GL +E DEAL +ME
Sbjct: 546 KGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKME-------------------------- 579
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
+ G +P+ V ++ +I + +++ +A +L+ EM G L
Sbjct: 580 -------DNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 226/498 (45%), Gaps = 69/498 (13%)
Query: 45 SLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
S+ + +++D L K D+D A+A +KM +G + TY L+ GLC R D +
Sbjct: 9 SVVTYTTLIDGLCKSGDLDAAQALL-QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQT 67
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCK 159
+ M G +P+ V YN+LIH LC ++ A + L+ + PN +T+S L+ C+
Sbjct: 68 VKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCR 127
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
L A L+ + G V ++V + C + R +
Sbjct: 128 RRRLDQARGLIREMILRGSVCNLVVYIDCIFGFC-----------------EARCQSSRY 170
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
CR EM G +P+V TYN IS C+ G LD L++ +M GI + VT+ ++I
Sbjct: 171 ECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIIS 230
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-- 337
GLC RIDD ++ + M + G Y+ +L L R N+ D E L+ M+ +
Sbjct: 231 GLCKANRIDDAFQVFKGMLE--RGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKA 288
Query: 338 -------------------------------------FPRAVDRSLKILGFCVDGNVEDA 360
P + + I G C GNV+DA
Sbjct: 289 GCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDA 348
Query: 361 KRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVL 418
+ +M++ G P+V+ ++ LI +C+ R+ +A +L+ EM +P T+NT++
Sbjct: 349 WKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLI 408
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
G + G++ A KL+ ++M+ + G P Y+ LI + G ++ A L +M K
Sbjct: 409 DGQSKFGSLKQA-KLLLQEMQAV--GCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAK 465
Query: 479 GILPDYLTWNSLLICLSQ 496
G PD +T+N++L S+
Sbjct: 466 GCFPDIITYNTVLSAFSK 483
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 232/545 (42%), Gaps = 64/545 (11%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ T+I GL ++ ++ ++ P++ + +++D L K K+M+
Sbjct: 13 YTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML 72
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
SG + D TY L+ GLC+ NR+ D +L + G PN + Y+TL+ C+ ++
Sbjct: 73 RSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLD 132
Query: 134 RARSLMSDM-----------------------------------------EEPNDVTFSI 152
+AR L+ +M P+ VT++
Sbjct: 133 QARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNT 192
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
I CK L L +LE+ G PDVVT ++ LC R+ DA ++ + E+G
Sbjct: 193 FISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERG 252
Query: 213 ----------------RLGKVKGGCRFLKEME--RKGCLPNVDTYNILISSYCETGVLDS 254
R ++ L+ M+ + GC+ V T+N I + C +G
Sbjct: 253 CVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPL 312
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A ++ M G N ++Y+ +I GLC G +DD K+ + M DS K + +N++
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG-CCKPDVIFFNTL 371
Query: 315 LYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ G + + +A + L +M+ P V + I G G+++ AK +M G
Sbjct: 372 ISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVG 431
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PNVV Y LI+ Y + EA L EM+ G P T+NTVLS + G + A
Sbjct: 432 CKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKA- 490
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ V + ++ P + Y LI C + LL +M +G D T+N L+
Sbjct: 491 EGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLI 550
Query: 492 ICLSQ 496
L++
Sbjct: 551 AKLAE 555
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 128/574 (22%), Positives = 228/574 (39%), Gaps = 102/574 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL +AR +D ++ + R P L +NS++ L +
Sbjct: 43 PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 102
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK--------------- 113
++++ +G + TY+ L+ C R+ L+ M RG
Sbjct: 103 LQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCE 162
Query: 114 ----------------------PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
P+ V YNT I LCK GK+ + ++ +M+ P+
Sbjct: 163 ARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDV 222
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VTF +I CK + +A + + G VPD +T + +L+ L R+ E+LE
Sbjct: 223 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEH 282
Query: 208 S------------------GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G R GK L M G LPN+ +YN +I C++
Sbjct: 283 MQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKS 342
Query: 250 GVLDSALDVFNDMKIDGI-SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G +D A + M G + + ++TLI G C GR+ ++L M+ +K +
Sbjct: 343 GNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMK-AKNICVPDV 401
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN+++ G + +A L++M+ + P V + I G+ G E+A+ FD+
Sbjct: 402 VTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDE 461
Query: 367 MIEEGGVPNVVIYDC-------------------------------------LIHAYCQE 389
M +G P+++ Y+ LI YC+
Sbjct: 462 MSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRA 521
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
E + L++EMT G+ + T+N +++ L V + V + M + + +P +
Sbjct: 522 EDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQM--LDQDCVPSA 579
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
++ L++ G SA ++ +M KG L D
Sbjct: 580 SIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVD 613
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 195/437 (44%), Gaps = 29/437 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + T I GL +A ++ ++ + + R + P + F SI+ L K + ID A
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQV 244
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS--RGVKPNSVIYNTLIHS 125
+ K M+ G D TY+I++ L NR+ ++L M++ G +N I +
Sbjct: 245 F-KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-P 180
LC++GK A++++ M E PN ++++ +I CK N+ +A L K G P
Sbjct: 304 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 363
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGE-----------------QGRLGKVKGGCRF 223
DV+ ++ C GR+ A ++L E Q + G +K
Sbjct: 364 DVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLL 423
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+EM+ GC PNV TY LI+ Y + G+ + A +F++M G + +TY+T++
Sbjct: 424 LQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSK 483
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
G + + Q +++ Y ++ G R ++ L L++M
Sbjct: 484 AGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDS 543
Query: 344 RSLKILGFCVDGNVE---DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ +L + E A + QM+++ VP+ I++ L+ + + V A +++
Sbjct: 544 YTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQ 603
Query: 401 EMTGHGYLPIASTFNTV 417
EM G+L AS +
Sbjct: 604 EMNEKGHLVDASNLEAL 620
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 152/317 (47%), Gaps = 26/317 (8%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G +V TY LI C++G LD+A + M G + N VTY LI GLC R
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
D ++ ++ M + G + + YNS+++GL N+ D+A L+++ + P +
Sbjct: 61 PHDAIQTVKRM--LRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY-DCLI---HAYCQEER--VREASEL 398
S ++ C ++ A+ +MI G V N+V+Y DC+ A CQ R R+ E+
Sbjct: 119 STLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEM 178
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++ G +P T+NT +SGLC+ G + L+++EE RG G P + +I
Sbjct: 179 IES----GRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG---GIPPDVVTFCSIISG 231
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHE 518
LC+ A + M+ +G +PD LT++ +L LS+ N + + V+
Sbjct: 232 LCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRA---------NRLDTVDEVLEH 282
Query: 519 LSAKEKRCKLRSLNHLA 535
+ A + C + H A
Sbjct: 283 MQAMKAGCVMEVYTHNA 299
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 71/198 (35%), Gaps = 38/198 (19%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI- 61
++ P+ + +I G + M + D +S P + +N++L K +
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMM 487
Query: 62 DLARAFYRK-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK------- 113
A Y++ K S D TY IL+ G C G LL M +RG
Sbjct: 488 SKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYN 547
Query: 114 -----------------------------PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
P++ I+N+L+ + G V ARS++ +M E
Sbjct: 548 VLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNE 607
Query: 145 PNDVTFSILICAYCKEEN 162
+ + + A KE N
Sbjct: 608 KGHLVDASNLEALNKESN 625
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/490 (27%), Positives = 224/490 (45%), Gaps = 31/490 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + + ++ GL + + + + + TP + + S++D L KE
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M G+ D Y L++ L T ++ + M S G P+ V +T+I L K
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++G A + ME PN+V +S LI CK + AL +L + PD +T
Sbjct: 139 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 198
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC G V E R F EM GC P+V TYNILIS
Sbjct: 199 YNVLIDGLCKSGDV-----------EAAR--------AFFDEMLEAGCKPDVYTYNILIS 239
Query: 245 SYCETGVLDSAL-DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ G D+A + + I+G + + TY ++ L +I++ + +++ + + G
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKI--TANG 297
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
I+ YN++L GL + + +EA++ L+++ P V + I G + +A
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ F +M G + V Y LI Q ++ +AS + K MT HG +P T +T++ GL
Sbjct: 358 KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 417
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ G +G A+++ + M RG P YS LI LC+ A +L QM
Sbjct: 418 SKAGRIGAAVRIFKS-ME--ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 474
Query: 482 PDYLTWNSLL 491
PD +T+N L+
Sbjct: 475 PDTITYNILI 484
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 232/517 (44%), Gaps = 32/517 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-DVLVKEDIDLARAF 67
PD + ++I GLG+ + + K ++ + + +++ ++L I A +
Sbjct: 54 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSV 113
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y K M + G D T + ++ GL R+G ++ M++RG+ PN V+Y+ LIH LC
Sbjct: 114 Y-KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 172
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K+ A +++ M++ P+ +T+++LI CK ++ A ++ G PDV
Sbjct: 173 KARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 232
Query: 184 TITKVLELLCSVGRVMDAVEIL-EESGEQG----------------RLGKVKGGCRFLKE 226
T ++ C G A L +E+ G + K++ +++
Sbjct: 233 TYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK 292
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ GC P + TYN L++ C+ G L+ A+D+ + +G + + VTY +LI GL R
Sbjct: 293 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 352
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+ K+ + M + G Y +++ L + + +A K M P V
Sbjct: 353 SFEAYKLFKEM--ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 410
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S I G G + A R F M G PN V+Y LIH C+ ++ A E++ +M
Sbjct: 411 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 470
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P T+N ++ GLC+ G+V A +E + G P Y+ LI C+ G
Sbjct: 471 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA---GCKPDVYTYNILISGFCKAGN 527
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT 499
+A + M + +T+ +L+ +C +Q T
Sbjct: 528 TDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLT 564
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 192/426 (45%), Gaps = 35/426 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E ++ +I GL +AR ++ ++ + + TP +N ++D L K D++ ARAF
Sbjct: 159 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAF 218
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLT-NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +M+ +G + D YTY IL+ G C N L G + Y ++ L
Sbjct: 219 F-DEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWL 277
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
KN K+ A +LM + P T++ L+ CK L A+ LL K G PDV
Sbjct: 278 AKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 337
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT T +++ L R +A ++ +E +G + GK+ K
Sbjct: 338 VTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKT 397
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M GC+P+V T + +I + G + +A+ +F M+ G++ N V Y LI GLC +
Sbjct: 398 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 457
Query: 287 IDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
+D L++L M+ K +P YN ++ GL + + A + +M P
Sbjct: 458 MDCALEMLAQMK------KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I GFC GN + A FD M NVV Y LI C+ ++ +AS +
Sbjct: 512 VYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQ 571
Query: 401 EMTGHG 406
M G
Sbjct: 572 HMKERG 577
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 166/345 (48%), Gaps = 24/345 (6%)
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------- 212
A+ L+EK + G P + T +L LC +GR+ +A+++L + + G
Sbjct: 5 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 64
Query: 213 RLGKVK---GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
LGK K + KEM +G + Y LI +TG + A V+ M G
Sbjct: 65 GLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVP 124
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ VT T+I GL GRI ++I + ME G Y+++++GL + + D ALE
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSME--ARGLAPNEVVYSALIHGLCKARKMDCALE 182
Query: 330 YLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L QM+K F P + ++ I G C G+VE A+ FD+M+E G P+V Y+ LI +C
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242
Query: 388 QEERVREASE-LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ AS L +E T +G T+ ++ L + + A+ L+E + G
Sbjct: 243 KAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALME---KITANGCT 299
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ LC+ G + A LL ++V G PD +T+ SL+
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 344
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 7/261 (2%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K++ ++++ GC P + TYN L++ C+ G L+ A+D+ + +G + + VTY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+LI GL R + K+ + M + G Y +++ L + + +A K M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEM--ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMT 118
Query: 336 K--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
P V S I G G + A R F M G PN V+Y LIH C+ ++
Sbjct: 119 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 178
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
A E++ +M P T+N ++ GLC+ G+V A +E + G P Y+
Sbjct: 179 CALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEA---GCKPDVYTYN 235
Query: 454 PLIKALCEKGGFQSASMLLVQ 474
LI C+ G +AS L Q
Sbjct: 236 ILISGFCKAGNTDAASHSLAQ 256
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/517 (26%), Positives = 232/517 (44%), Gaps = 42/517 (8%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDI--------------DLARAFYRKKMMA-SGVQGD 80
LVS +L++F+ I++ ++ D DL RA M GV
Sbjct: 157 LVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPG 216
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ Y +++ GLC R+ D KL M R V PN + YNTLI CK G++ A ++
Sbjct: 217 VFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRE 276
Query: 141 DME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M+ EP +TF+ L+ C+ + + A +LE+ +GFVPD T T + + G
Sbjct: 277 RMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCG 336
Query: 197 RVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
V ++ + EE+ +G + G ++ LK+ G P +N
Sbjct: 337 NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFN 396
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+++ YC+ G ++ A M+ G+ N VTY++L++ C +++ K ++ M
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKM--V 454
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
++G + YN+++ G R D + L++MEK L P + I C D N+
Sbjct: 455 EKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL 514
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A+ M+ G VPN IY+ LI C ++++A EM +P T+N ++
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+GLC++G V A L E R +G Y+ LI G Q A L M
Sbjct: 575 NGLCKKGKVMEAENLASEITR---KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631
Query: 479 GILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMV 515
GI P T++ L+ ++ L+ + EM+ +V
Sbjct: 632 GIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLV 668
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/517 (25%), Positives = 234/517 (45%), Gaps = 40/517 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDL 63
P F +++ GL RA+M+ + + + + + P + ++ D +K I L
Sbjct: 285 PTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITL 344
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ RK GVQ DYT +IL+ LC + ++L G+ P V +NT++
Sbjct: 345 SEEAVRK-----GVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIV 399
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ C+ G + +A + + ME PN VT++ L+ +C+ +N+ A ++K G +
Sbjct: 400 NGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459
Query: 180 PDVVTITKVLE---LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF------------- 223
P+V T +++ C R +E +E+ G + + + GC
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNV--ISYGCLINCLCKDANILEAE 517
Query: 224 --LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
L +M +G +PN YN+LI C G L A F++M I VTY+ LI GL
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPR 340
C G++ + + E +++G + YNS++ G +ALE + M+K
Sbjct: 578 CKKGKVMEAENLAS--EITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKP 635
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ +++ C + ++ + +M++ VP+ VIY+ LIH Y + V++A L
Sbjct: 636 TLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHS 695
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
M G P T+N ++ G ++G + LV DM+ RG +P + Y LI C
Sbjct: 696 AMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLV-NDMK--IRGLIPKTETYDILIVGHC 752
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ F A + +M G P ++L+ L ++
Sbjct: 753 KLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREE 789
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 184/379 (48%), Gaps = 34/379 (8%)
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNA----LVLLEKSFSFGFVPDVVTITKVLELL 192
+L S P FS ++ + C E +V+ +L++K G +P V ++ LE L
Sbjct: 101 TLFSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKD---GVLPSVASLNLFLESL 157
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
S R D +++ E E G +LG +K + M+R G P V
Sbjct: 158 VSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGV 217
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN++I C+ + A +F++M ++ N +TY+TLI G C G++++ I +
Sbjct: 218 FVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRER 277
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVD 354
M+ E + I +NS+L GL R +EA L++ME P + G
Sbjct: 278 MK--VENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKC 335
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDC--LIHAYCQEERVREASELMKEMTGHGYLPIAS 412
GNV+ + ++ + +G ++ Y C L++A C+E + +A E++K+ +G P+
Sbjct: 336 GNVDASITLSEEAVRKG--VQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGV 393
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
FNT+++G C+ G++ A +E+ M +G P Y+ L+K CE + A +
Sbjct: 394 FFNTIVNGYCQVGDINKAYTTIEK-MEAVGLR--PNHVTYNSLVKKFCEMKNMEEAEKCI 450
Query: 473 VQMVGKGILPDYLTWNSLL 491
+MV KG+LP+ T+N+L+
Sbjct: 451 KKMVEKGVLPNVETYNTLI 469
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 151/340 (44%), Gaps = 25/340 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G GR+ + + + + + + + P++ + +++ L K+ L
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ GV + Y +L+ G C+ ++ D F+ M +R + P V YN LI+ LCK
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCK 579
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A +L S++ + +T++ LI Y N+ AL L E G P + T
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNT 639
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEM 227
+++ G V+ VE + + Q L G V+ C M
Sbjct: 640 YHRLIAGCGKEGLVL--VEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E +G P+ TYN LI + + G + ++ NDMKI G+ TYD LI G C
Sbjct: 698 EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDF 757
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
D + M ++ G +S ++++ GL E + +A
Sbjct: 758 DGAYVWYREMFEN--GFTPSVSICDNLITGLREEGRSHDA 795
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 5/204 (2%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ ++I G A + ++ + + + + P+L ++ ++ KE + L Y++ M+
Sbjct: 605 YNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQE-ML 663
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+ D Y L+ V L M+++G++P+ + YN LI K G++
Sbjct: 664 QMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMH 723
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+ ++L++DM+ P T+ ILI +CK ++ A V + F GF P V ++
Sbjct: 724 KVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLI 783
Query: 190 ELLCSVGRVMDAVEILEESGEQGR 213
L GR DA I E +G+
Sbjct: 784 TGLREEGRSHDADVICSEMNMKGK 807
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 201/444 (45%), Gaps = 32/444 (7%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
+ S P SI F ++ + + + + V+ + + ++P L N +++ + +
Sbjct: 74 VHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQP 133
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ + KMM G + D T+ L+ G C NR+ D L + G +PN V Y TL
Sbjct: 134 CRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTL 193
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
IH LCKN + A + + M + PN VT++ L+ C+ +A LL G
Sbjct: 194 IHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGI 253
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+V+T T +++ VG++M+A E+ K M + P+V T
Sbjct: 254 QPNVITFTALIDAFVKVGKIMEAKEL-------------------YKVMIQMSVYPDVFT 294
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y LI+ C G LD A +F M+ +G N VTY TLI G C R++DG KI E
Sbjct: 295 YTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFY--E 352
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
S++G Y ++ G + D A E QM R+ +L G C +G
Sbjct: 353 MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGY 412
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VE A F M + N+V Y +I C+ +V +A +L + G P T+ T
Sbjct: 413 VEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTT 472
Query: 417 VLSGLCRQGNVGTA---LKLVEED 437
++SG CR+G + A K ++ED
Sbjct: 473 MISGFCRRGFIHEADALFKKMKED 496
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 182/395 (46%), Gaps = 30/395 (7%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
L M+ G+ P N +++ +C++ + RA + M EP+ VTF+ L+ +C
Sbjct: 104 LFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFC 163
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ +AL L ++ GF P+VVT T ++ LC + AVEI + G+ G
Sbjct: 164 HWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNG------ 217
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
PNV TYN L+S CE G A + DM GI N +T+ LI
Sbjct: 218 -------------IRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALI 264
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE--YLKQMEK 336
G+I + ++ ++M + + Y +++ GL + DEA + YL +
Sbjct: 265 DAFVKVGKIMEAKELYKVM--IQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNG 322
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+P V + I GFC VED + F +M ++G V N + Y LI YC R A
Sbjct: 323 YYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQ 382
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
E+ +M P T+N +L GLC G V AL ++ + MR R Y+ +I
Sbjct: 383 EVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKAL-MIFKYMR--KREMDINIVTYTIII 439
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +C+ G + A L + KG+ P+ +T+ +++
Sbjct: 440 QGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMI 474
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 111/242 (45%), Gaps = 7/242 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ ALD+F M + V + L+ + R D + + + M+ G +
Sbjct: 63 FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQIL--GISPVLYTC 120
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N V+ + R +Q A +L +M KL P V + + GFC +EDA FDQ++
Sbjct: 121 NIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG 180
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G PNVV Y LIH C+ + A E+ +M +G P T+N+++SGLC G
Sbjct: 181 MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSD 240
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A L+ + M+ RG P ++ LI A + G A L M+ + PD T+ +
Sbjct: 241 AAWLLRDMMK---RGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTA 297
Query: 490 LL 491
L+
Sbjct: 298 LI 299
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 8/179 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
P+E + T+I G +++ + D K +S+ + + + ++ LV D+A+
Sbjct: 325 PNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRP-DVAQE 383
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ +M + D TY +L+ GLC V + M+ R + N V Y +I +
Sbjct: 384 VF-NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGM 442
Query: 127 CKNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK GKV A SL S +PN +T++ +I +C+ + A L +K GF+P+
Sbjct: 443 CKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 9/197 (4%)
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
S Y +L Q +EAL+ +M + P VD + + + F+
Sbjct: 47 FSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFE 106
Query: 366 QMIEEGGVPNVVIYDC--LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
QM G P V+Y C +++ C+ + AS + +M G+ P TF ++L G C
Sbjct: 107 QMQILGISP--VLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCH 164
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+ AL L ++ +G G P Y+ LI LC+ A + QM GI P+
Sbjct: 165 WNRIEDALALFDQI---VGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPN 221
Query: 484 YLTWNSLLICLSQQTTW 500
+T+NSL+ L + W
Sbjct: 222 VVTYNSLVSGLCEIGRW 238
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/397 (30%), Positives = 210/397 (52%), Gaps = 36/397 (9%)
Query: 122 LIHSLCKNGKVGRARSLMSDME-----EPNDVTFSILICAYC--KEENLVNALV-LLEKS 173
+I LC+ G+V +A+ LM +M +PN T++ L+ AY K+ V+ ++ L+EK
Sbjct: 222 VIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKE 281
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
V V T + +++ S G + +A +I EE E+ RLG +
Sbjct: 282 ---QVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNM 338
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
K EM ++ +PN TY LI C+ G +++A + +M+ G+ N V ++T
Sbjct: 339 KRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTT 398
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK 336
+ G C G++D+ L++ +ME K+G + YN + GL + ++ DEA L M EK
Sbjct: 399 MDGYCRRGKMDEALRLQAIME--KKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEK 456
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P V ++ I +C +GN+ +A+R F M ++G VPN++ Y+ LI AYC++E+V++A
Sbjct: 457 GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQA 516
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSP 454
++ EM G LP T+++++ G C G V ALKL E ++GI R Y+
Sbjct: 517 HKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITR----NVATYTS 572
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+I L ++G A L +M+ G++PD + SL+
Sbjct: 573 MISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 23/267 (8%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
D +S+ ++ P+ + +++ + K A +M + GV + + M G C
Sbjct: 346 DEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRR 405
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
++ + +L +M+ +G+ + YN L + LCK + A+ +++ M E PN VTF
Sbjct: 406 GKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTF 465
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
++ I YCKE NL A L G VP+++T +++ C
Sbjct: 466 TMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYC----------------- 508
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
+ KVK + EM KG LP++ TY+ LI C G +D AL +FN+M++ GI+ N
Sbjct: 509 --KKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRN 566
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY ++I GL GR D+ K+ M
Sbjct: 567 VATYTSMISGLSKEGRADEAFKLYDEM 593
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 142/301 (47%), Gaps = 29/301 (9%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD---GFKLLHVMKSRGVKPNS 116
DI+ A + ++M ++ D Y Y+ + + + R+G+ F L M R + PN+
Sbjct: 302 DIEEAEKIF-EEMREKNIEMDVYVYSSM---ISWSRRLGNMKRAFALFDEMSQRDIVPNA 357
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEK 172
Y LI +CK G++ A L+ +M+ N V F+ + YC+ + AL L
Sbjct: 358 HTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAI 417
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGK 216
G DV T + LC + R +A IL E+G + G
Sbjct: 418 MEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGN 477
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
+ R ++ME+KG +PN+ TYN LI +YC+ + A + ++M G+ + TY +
Sbjct: 478 LAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSS 537
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
LI G C GR+D+ LK+ M +G ++ Y S++ GL +E + DEA + +M K
Sbjct: 538 LIHGECIVGRVDEALKLFNEMR--LKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMK 595
Query: 337 L 337
+
Sbjct: 596 I 596
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 178/397 (44%), Gaps = 35/397 (8%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLV----KEDIDLARAFYRKKMMASGVQGDDYTYAILMKG 90
++V + + P++ +N++L+ V ++ +D K+ + V TY+IL++
Sbjct: 241 EMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVA----TYSILIQW 296
Query: 91 LCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PN 146
+ + + K+ M+ + ++ + +Y+++I + G + RA +L +M + PN
Sbjct: 297 YSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPN 356
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
T+ LI CK + A +LL + S G ++V ++ C
Sbjct: 357 AHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYC------------- 403
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
R GK+ R ME+KG +V TYNIL + C+ D A + N M G
Sbjct: 404 ------RRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKG 457
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ N VT+ I C G + + ++ + ME K+G I YN+++ ++ + +
Sbjct: 458 VKPNVVTFTMFIEIYCKEGNLAEAERLFRDME--KKGEVPNIITYNTLIDAYCKKEKVKQ 515
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A + +M + L P S I G C+ G V++A + F++M +G NV Y +I
Sbjct: 516 AHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMIS 575
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+E R EA +L EM G +P F +++
Sbjct: 576 GLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 211/471 (44%), Gaps = 68/471 (14%)
Query: 11 ESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDL-ARAFY 68
E F+ + + G+A + V D + F ++K FNS+L+V+++E + A FY
Sbjct: 95 EKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFY 154
Query: 69 RKKMMASGV-------------------------------------QGDDYTYAILMKGL 91
+ A GV Q D YTY LM GL
Sbjct: 155 NHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGL 214
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPND 147
C +R+ + LL M+ G P+ V +N LI+ LCK G + R L+ +M PN+
Sbjct: 215 CKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNE 274
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VT++ LI C + L A+ LL++ S VP+VVT ++ L GR +D
Sbjct: 275 VTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALD------- 327
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
G R L ME +G N Y+ LIS + G A+ +F +M +
Sbjct: 328 ------------GARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKEC 375
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N + Y +I GLC G+ D+ L++L M +++ K Y+S++ G + +A
Sbjct: 376 ELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNR--CKPNAYTYSSLMKGFFEAGNGHKA 433
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+E K M K V S+ I G C DG V++A + QM+ +G P+VV Y +I+
Sbjct: 434 IEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMING 493
Query: 386 YCQEERVREASELMKEMTGH--GYLPIASTFNTVLSGLCRQGNVGTALKLV 434
V +A +L EM P T+N +L+ LC+Q ++ A+ L+
Sbjct: 494 LSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLL 544
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 134/297 (45%), Gaps = 25/297 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E + T+I GL + + D + P++ + +I++ LVK+ L A
Sbjct: 272 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARV 331
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G ++Y Y+ L+ GL + + +L M + + N+++Y+ +I LC+
Sbjct: 332 LALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCR 391
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK A ++S+M +PN T+S L+ + + N A+ + + F + V
Sbjct: 392 DGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVC 451
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LC G+V +A+ + +M KGC P+V Y +I+
Sbjct: 452 YSVLIHGLCKDGKVKEAMMV-------------------WAQMLGKGCKPDVVAYGSMIN 492
Query: 245 SYCETGVLDSALDVFNDM--KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
G+++ AL ++N+M + + VTY+ L+ LC I + +L M D
Sbjct: 493 GLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLD 549
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ VI GL R ++ ++ ++ P+ ++S++ + K M
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
++ Y++L+ GLC +V + + M +G KP+ V Y ++I+ L G V
Sbjct: 441 AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLV 500
Query: 133 GRARSLMSDM------EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A L ++M +P+ VT++IL+ A CK+ ++ A+ LL G PD+VT
Sbjct: 501 EDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCI 560
Query: 187 KVLELLC-SVGRVMDAVEILEESGEQGRLGK---VKGGCRFLKEMERKGCLPNVDTYNIL 242
L L + D E L+ G RL K V G + ++ M +K P T+ +
Sbjct: 561 IFLRTLREKLDPPQDGREFLD--GLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRV 618
Query: 243 ISSYCETGVLDSAL 256
+ C + +A+
Sbjct: 619 VEDLCNPKKVQAAI 632
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/503 (27%), Positives = 227/503 (45%), Gaps = 38/503 (7%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+PP+ + T+I + ++ D A + + P +N ++ L + + LA A
Sbjct: 86 APPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL-LAAA 144
Query: 67 --FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + G D Y+Y IL+KGLC R+ D ++ M +P Y L+
Sbjct: 145 CGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLD 204
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK +VG A +L+ +M PN VT++ LI C+E + LLEK P
Sbjct: 205 GLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSP 264
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T T+V+ LC + GKV G + L E KG V TYN
Sbjct: 265 DCWTYTQVVHGLC-------------------KHGKVGHGAKVLHEAIGKGVALEVLTYN 305
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI+ YC+ G + +ALDV MK + ++ T++ +I G C GG++ + L M +
Sbjct: 306 ALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGA 365
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
G +NS++ G ++ AL L ME+ + P ++ I C +G +E
Sbjct: 366 --GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLE 423
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A F + +G + VIY L+H YCQ + A LM++M +P T+NT++
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLI 483
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GLC+ + A+ L+++ + +G P + ++ LIK + A+ + QM+
Sbjct: 484 DGLCKVKRLDRAIDLLDKMKK---QGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISS 540
Query: 479 GILPDYLTWNSLLICLSQQTTWL 501
G PD T+ L T W
Sbjct: 541 GCKPDKQTYT-----LKISTDWF 558
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 152/592 (25%), Positives = 248/592 (41%), Gaps = 59/592 (9%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-E 59
MP + D + +I+GL A I+D + +SR P + + +LD L K
Sbjct: 151 MPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVR 210
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ A A +M+ GV + TY L+ GLC R D KLL M+ + P+ Y
Sbjct: 211 RVGEAEALL-GEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTY 269
Query: 120 NTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
++H LCK+GKVG ++ + +T++ LI YCK ++ AL +L+
Sbjct: 270 TQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKR 329
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKG 219
P V T +V+ C G+V A+ L + G +G+ K
Sbjct: 330 NRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKI 389
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
R L ME G LP+ TY I I + C+ G L+ A +F+ + + GI + V Y +L+
Sbjct: 390 ALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVH 449
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C G ID +++ M + E + YN+++ GL + + D A++ L +M+K +
Sbjct: 450 GYCQVGDIDSAFGLMEKM--ASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGI 507
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P ++ I D DA + ++QMI G P+ Y I E +E +
Sbjct: 508 EPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENI 567
Query: 398 LMK--EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
M EM G P T+N ++ + G K ++ + P YS L
Sbjct: 568 DMAVVEMHEAGVFPDVETYNAIIKAYV---DAGLKEKAFFAHVKMLSVPIDPDCTTYSIL 624
Query: 456 IKALCEK---GGFQSASM-----------LLVQMVGKGILPDYLTWNSLL-----ICLSQ 496
+ +C K F + + L QM P T+ +LL C +
Sbjct: 625 LNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLE 684
Query: 497 QTTWLLL-------LLLNEMVSFVMVVH-ELSAKEKRC-KLRSLNHLAHGAG 539
+ WLLL LL +M +++ + L + C + RS+ H + G
Sbjct: 685 EVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPG 736
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 132/561 (23%), Positives = 219/561 (39%), Gaps = 76/561 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + +DV K + + +P + ++ L K A
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKV 288
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV + TY L+ G C + +L +MK V P +N +IH C
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCC 348
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV +A + ++ M PN VTF+ LI C AL LL+ +G +PD T
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQT 408
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G++ +A + +G ++G + +++M
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA 468
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ C+P+V TYN LI C+ LD A+D+ + MK GI T++ LI+ + +
Sbjct: 469 SENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHA 528
Query: 289 DGLKILQLMEDSKEGSKGRISPYN-----SVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
D K+ + M S G K Y G +E D A+ + + +FP
Sbjct: 529 DAAKMYEQMISS--GCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHE-AGVFPDVET 585
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER------------ 391
+ I + G E A +M+ P+ Y L++ C ++
Sbjct: 586 YNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKM 645
Query: 392 --VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV-----------GTALKLVEEDM 438
VR EL ++M P ST+ +L GLC Q + G ++ L++EDM
Sbjct: 646 VDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSI-LLDEDM 704
Query: 439 ---------------------RGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
R + S PG L+ LC+ G A + M+
Sbjct: 705 SDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDML 764
Query: 477 GKGILPDYLTWNSLLICLSQQ 497
G G D + W L+ CL ++
Sbjct: 765 GLGYNYDEVVWKLLIDCLHEK 785
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 132/302 (43%), Gaps = 41/302 (13%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M + G PN TYN LI+++C+ +L A M+ G++ + TY+ L+ GLC G
Sbjct: 81 MLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGL 140
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ + M R S Y ++ GL + D+A +M + + R +
Sbjct: 141 LAAACGLFVQMPRRWGACYDRYS-YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTY 199
Query: 347 KIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+L G C V +A+ +M+ +G VPNVV Y+ LI CQE R + ++L+++M
Sbjct: 200 TVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEI 259
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL------------------ 446
+ P T+ V+ GLC+ G VG K++ E IG+G
Sbjct: 260 QRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHE---AIGKGVALEVLTYNALINGYCKGGD 316
Query: 447 -----------------PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
PG ++ +I C G A L QM G G+ P+ +T+NS
Sbjct: 317 MKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNS 376
Query: 490 LL 491
L+
Sbjct: 377 LI 378
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 120/264 (45%), Gaps = 12/264 (4%)
Query: 235 NVDTYNILISSYCETGV----LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
+V ++N + +Y G L L F M G N TY+TLI C + D
Sbjct: 50 DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR---SLK 347
L M ++ G YN ++ GL R A QM + + DR ++
Sbjct: 110 RAALVRMREA--GLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTIL 167
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C G ++DA R F +M P V Y L+ C+ RV EA L+ EM G
Sbjct: 168 IKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGV 227
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P T+N ++ GLC++G KL+E+ I R S P Y+ ++ LC+ G
Sbjct: 228 VPNVVTYNALIGGLCQEGRFDDVTKLLEK--MEIQRHS-PDCWTYTQVVHGLCKHGKVGH 284
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
+ +L + +GKG+ + LT+N+L+
Sbjct: 285 GAKVLHEAIGKGVALEVLTYNALI 308
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 141/332 (42%), Gaps = 42/332 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV--KEDIDLARA 66
PD + T+I GL + + ++ + D + + + P+ FN ++ ++ K+ D A+
Sbjct: 474 PDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKM 533
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV--MKSRGVKPNSVIYNTLIH 124
+ ++M++SG + D TY + + + + V M GV P+ YN +I
Sbjct: 534 Y--EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIK 591
Query: 125 SLCKNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEEN--------------LVNA 166
+ G +A ++S +P+ T+SIL+ C +++ + N
Sbjct: 592 AYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNL 651
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-----------ILEESGEQGRLG 215
L E+ P + T +L LC+ R ++ VE +L+E LG
Sbjct: 652 QELFEQMCESDAAPGISTYKALLRGLCNQCR-LEEVEWLLLKMQGNSILLDEDMSDYLLG 710
Query: 216 ------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+ C + M + P + + +L+S C++G A+ +F+DM G ++
Sbjct: 711 CYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNY 770
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+ V + LI L G L++L +M+ K
Sbjct: 771 DEVVWKLLIDCLHEKGHAGACLEMLSVMDAKK 802
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 233/532 (43%), Gaps = 102/532 (19%)
Query: 11 ESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
E+IFI + + G+A + + V + + + ++K FNS+L+V+++E
Sbjct: 124 ETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEG--------- 174
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL-LHVM--KSRGVKPNSVIYNTLIHSL 126
D++YA FK LHV S+G +PN + YN +I +L
Sbjct: 175 -----------DFSYA---------------FKFYLHVFGANSKGFQPNLLTYNLIIKAL 208
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G++ RA +M P+ T+S L+ CKE + A+ LL++ + G +P+
Sbjct: 209 CKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNP 268
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT + ++ L ++G+ R K+ + M KGC+PN TYN L
Sbjct: 269 VTFNVL-------------IDALSKNGDLSRAAKL------VDNMFLKGCVPNEVTYNTL 309
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C G LD AL + M N VTY T+I GL R +DG+ IL ME+
Sbjct: 310 IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE--R 367
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G K Y+S++ GL++E + + A+ K+M + P V I G C D ++A
Sbjct: 368 GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 427
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAY---------------------------------- 386
+ +M+ +G +PN Y L+ +
Sbjct: 428 EDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNG 487
Query: 387 -CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ R+REA + M G G P +++++ GLC G+V LKL E M+ S
Sbjct: 488 LCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE-MQCQEPKS 546
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P Y+ L ALC + A LL M+ +G PD LT N L L ++
Sbjct: 547 RPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 598
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 176/433 (40%), Gaps = 53/433 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I+ L + I+ V + N P + ++++++ L KE F
Sbjct: 196 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 255
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M A G + T+ +L+ L + KL+ M +G PN V YNTLIH LC
Sbjct: 256 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 315
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GK+ +A SL LEK S VP+ VT +
Sbjct: 316 KGKLDKALSL-------------------------------LEKMVSSKCVPNQVTYGTI 344
Query: 189 LELLCSVGRVMDAVEIL---EESGEQG-------------RLGKVKGGCRFLKEMERKGC 232
+ L R D V IL EE G++ + GK + R KEM KGC
Sbjct: 345 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV Y I C D A D+ +M G N TY +L++G G D
Sbjct: 405 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG--DSQKA 462
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
IL E + + + + +L GL + EAL M E L P V S I G
Sbjct: 463 ILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKG 522
Query: 351 FCVDGNVEDAKRCFDQM--IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C G+V+ + F +M E P+VV Y+ L +A C+++ + A +L+ M G
Sbjct: 523 LCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCD 582
Query: 409 PIASTFNTVLSGL 421
P + T N L L
Sbjct: 583 PDSLTCNIFLETL 595
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 204/412 (49%), Gaps = 31/412 (7%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EPNDV 148
C + + LL M +G P+ ++ LI + +A +M +E +P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI +CK + +A +L++ S F PD VT ++ LCS G++ A+++L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL--- 216
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
++ C P V TY ILI + G +D AL + ++M G+
Sbjct: 217 ----------------NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK 260
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ TY+T+IRG+C G +D ++++ +E +GS+ + YN +L L + + +E
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLE--LKGSEPDVISYNILLRALLNQGKWEEGE 318
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ + +M EK P V S+ I C DG +E+A M E+G P+ YD LI A+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GS 445
C+E R+ A E ++ M G LP +NTVL+ LC+ G AL++ + +G G
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK----LGEVGC 434
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P S Y+ + AL G A ++++M+ GI PD +T+NS++ CL ++
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 207/419 (49%), Gaps = 28/419 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA-- 135
Q D + Y L+ G C NR+ D ++L M+S+ P++V YN +I SLC GK+ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 136 --RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
L+SD +P +T++ILI A E + AL L+++ S G PD+ T ++ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 194 SVGRVMDAVEI---LEESGEQGRL-------------GKVKGGCRFLKEMERKGCLPNVD 237
G V A E+ LE G + + GK + G + + +M + C PNV
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+ILI++ C G ++ A+++ MK G++ + +YD LI C GR+D ++ L+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
+G I YN+VL L + + D+ALE ++ ++ P + + G
Sbjct: 395 --ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ A +M+ G P+ + Y+ +I C+E V EA EL+ +M + P T+N
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
VL G C+ + A+ ++E +G G P Y+ LI+ + G+++ +M L
Sbjct: 513 IVLLGFCKAHRIEDAINVLES---MVGNGCRPNETTYTVLIEGI-GFAGYRAEAMELAN 567
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 199/418 (47%), Gaps = 28/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + +I G + I+D + D + + +P +N ++ L + +DLA
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++ Q TY IL++ L V + KL+ M SRG+KP+ YNT+I +C
Sbjct: 216 L-NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V RA ++ ++E EP+ ++++IL+ A + L+ K FS P+VV
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + ++ LC G++ +A+ +L+ E+G R G++ FL+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GCLP++ YN ++++ C+ G D AL++F + G S N +Y+T+ L S G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG-- 452
Query: 288 DDGLKILQL-MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
D ++ L + +E G YNS++ L RE DEA E L M + P V
Sbjct: 453 -DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ +LGFC +EDA + M+ G PN Y LI EA EL ++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPR 340
C G + L +L+ M ++G + ++ G + +A+ ++ +EK P
Sbjct: 100 CRSGNYIESLHLLETM--VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 157
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ I GFC ++DA R D+M + P+ V Y+ +I + C ++ A +++
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ P T+ ++ +G V ALKL++E + RG P Y+ +I+ +C
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE---MLSRGLKPDMFTYNTIIRGMC 274
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++G A ++ + KG PD +++N LL L Q W
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKW 314
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 218/453 (48%), Gaps = 29/453 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
P+ + TV+RGL +R + V + + + + +++ L ++D A
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M SGVQ + Y+ L++G C + R D K+ M RG+KP+ +++ LI LC
Sbjct: 181 L-DEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK G+A + M EPN VT+++LI + CKE ++ AL L ++ G PDVV
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------------------RLGKVKGGCRFL 224
T ++ L V + +A+ LEE QG ++G++ +
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEM-IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVR 358
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ M +GC+ N+ TYN LI + + A+++ +++ I G+ + TY LI G
Sbjct: 359 EMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKM 418
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-LFPRAVD 343
+D K L M + G K + Y +L + ++ + A+ +M+K A+
Sbjct: 419 WEVDRAEKFLCTMR--QRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIA 476
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S I G C G+++ K+ M++EG P+ V Y LI+ Y + + EA ++K+MT
Sbjct: 477 YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMT 536
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
G++P + F++++ G +G LKL+ E
Sbjct: 537 ASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHE 569
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 199/415 (47%), Gaps = 29/415 (6%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
+Y +M+GLC + R G+ LL M++ GV+ + V Y TLI LC ++ A L+ +M
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184
Query: 143 ----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+PN V +S L+ YC+ + + E G PDV+ T +++ LC
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC----- 239
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ G+ G+ KVK M ++G PNV TYN+LI+S C+ G + AL +
Sbjct: 240 --------KEGKTGKAAKVK------DMMVQRGLEPNVVTYNVLINSLCKEGSVREALTL 285
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+M G++ + VTY+TLI GL +D+ + L+ M + + +NSV++GL
Sbjct: 286 RKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGL 345
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ + +A++ + M + V + I GF V+ A D++ G P+
Sbjct: 346 CKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDS 405
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y LI+ + + V A + + M G + +L+ +C+QG + A+ L E
Sbjct: 406 FTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNE 465
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G ++ YS +I C+ G ++ L+ M+ +G+ PD +T++ L+
Sbjct: 466 MDKNCGLDAIA----YSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLI 516
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 155/338 (45%), Gaps = 62/338 (18%)
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD---TYN 240
T L +L GR DA +L + R V C L LP+V +YN
Sbjct: 38 TAAPFLAVLFRRGRA-DAAALLNR---RLRGAPVTEACSLL------SALPDVRDAVSYN 87
Query: 241 ILISSYCETG--VLDSALDVFNDMKIDG---ISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
++++ C G L A + DM + N V+Y T++RGLC+ R + + +L+
Sbjct: 88 TVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLR 147
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG 355
M+ S G + + Y +++ GL ++ D ALE L
Sbjct: 148 SMQAS--GVRADVVTYGTLIRGLCDASELDAALELL------------------------ 181
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
D+M G PNVV+Y CL+ YC+ R ++ ++ ++M+ G P F
Sbjct: 182 ---------DEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFT 232
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ LC++G G A K+ +DM + RG P Y+ LI +LC++G + A L +M
Sbjct: 233 GLIDDLCKEGKTGKAAKV--KDMM-VQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEM 289
Query: 476 VGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFV 513
KG+ PD +T+N+L+ LS +L ++E +SF+
Sbjct: 290 DDKGVAPDVVTYNTLIAGLSG------VLEMDEAMSFL 321
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 24/275 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +VI GL + + VK ++++ +L +N ++ ++ + +A
Sbjct: 333 PDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNL 392
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ SG++ D +TY+IL+ G V K L M+ RG+K Y L+ ++C
Sbjct: 393 M-DELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMC 451
Query: 128 KNGKVGRARSLMSDMEEP---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ G + RA L ++M++ + + +S +I CK ++ L++ G PD VT
Sbjct: 452 QQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVT 511
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ + +LG ++ R LK+M G +P+V ++ LI
Sbjct: 512 YSMLINMY-------------------AKLGDLEEAERVLKQMTASGFVPDVAVFDSLIK 552
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
Y G D L + ++M+ ++++ T+IR
Sbjct: 553 GYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 151/380 (39%), Gaps = 91/380 (23%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ ++RG R+ DV K + +SR + P + +F ++D L KE A
Sbjct: 191 PNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKV 250
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI----- 123
+ M+ G++ + TY +L+ LC V + L M +GV P+ V YNTLI
Sbjct: 251 KDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSG 310
Query: 124 --------------------------------HSLCKNGKVGRARSLMSDMEEP----ND 147
H LCK G++ +A + M E N
Sbjct: 311 VLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNL 370
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT-------------ITKVLELLCS 194
VT++ LI + + + A+ L+++ G PD T + + + LC+
Sbjct: 371 VTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCT 430
Query: 195 V------GRVMDAVEILEESGEQGRLGK----------------------VKGGCR---- 222
+ + + +L +QG + + + G C+
Sbjct: 431 MRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDM 490
Query: 223 -----FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+++M +G P+ TY++LI+ Y + G L+ A V M G + +D+L
Sbjct: 491 KTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSL 550
Query: 278 IRGLCSGGRIDDGLKILQLM 297
I+G + G+ D LK++ M
Sbjct: 551 IKGYSAEGQTDKVLKLIHEM 570
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/532 (27%), Positives = 233/532 (43%), Gaps = 102/532 (19%)
Query: 11 ESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
E+IFI + + G+A + + V + + + ++K FNS+L+V+++E
Sbjct: 100 ETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEG--------- 150
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL-LHVM--KSRGVKPNSVIYNTLIHSL 126
D++YA FK LHV S+G +PN + YN +I +L
Sbjct: 151 -----------DFSYA---------------FKFYLHVFGANSKGFQPNLLTYNLIIKAL 184
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G++ RA +M P+ T+S L+ CKE + A+ LL++ + G +P+
Sbjct: 185 CKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNP 244
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT + ++ L ++G+ R K+ + M KGC+PN TYN L
Sbjct: 245 VTFNVL-------------IDALSKNGDLSRAAKL------VDNMFLKGCVPNEVTYNTL 285
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C G LD AL + M N VTY T+I GL R +DG+ IL ME+
Sbjct: 286 IHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEE--R 343
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G K Y+S++ GL++E + + A+ K+M + P V I G C D ++A
Sbjct: 344 GQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEA 403
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAY---------------------------------- 386
+ +M+ +G +PN Y L+ +
Sbjct: 404 EDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNG 463
Query: 387 -CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ R+REA + M G G P +++++ GLC G+V LKL E M+ S
Sbjct: 464 LCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE-MQCQEPKS 522
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P Y+ L ALC + A LL M+ +G PD LT N L L ++
Sbjct: 523 RPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRER 574
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 176/433 (40%), Gaps = 53/433 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I+ L + I+ V + N P + ++++++ L KE F
Sbjct: 172 PNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFL 231
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M A G + T+ +L+ L + KL+ M +G PN V YNTLIH LC
Sbjct: 232 LDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCL 291
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GK+ +A SL LEK S VP+ VT +
Sbjct: 292 KGKLDKALSL-------------------------------LEKMVSSKCVPNQVTYGTI 320
Query: 189 LELLCSVGRVMDAVEIL---EESGEQG-------------RLGKVKGGCRFLKEMERKGC 232
+ L R D V IL EE G++ + GK + R KEM KGC
Sbjct: 321 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 380
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV Y I C D A D+ +M G N TY +L++G G D
Sbjct: 381 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKG--DSQKA 438
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
IL E + + + + +L GL + EAL M E L P V S I G
Sbjct: 439 ILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKG 498
Query: 351 FCVDGNVEDAKRCFDQM--IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C G+V+ + F +M E P+VV Y+ L +A C+++ + A +L+ M G
Sbjct: 499 LCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCD 558
Query: 409 PIASTFNTVLSGL 421
P + T N L L
Sbjct: 559 PDSLTCNIFLETL 571
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 219/477 (45%), Gaps = 45/477 (9%)
Query: 48 IFNSILDVLV-KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
IF +L L + +D A ++M G + +Y IL+KGLC R + +L+H+
Sbjct: 130 IFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHM 189
Query: 107 MKSRG---VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
M G PN V Y T+I LCK V RA+ + M + PN+ T++ LI Y
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+ +L++ + G PD V +L+ LC GR +A I + +G
Sbjct: 250 TGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTI 309
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
G + FL M R G P+ +NI+ ++Y + ++D A+ +F+ M+
Sbjct: 310 YGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMR 369
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+S V Y LI LC GR+DD +L+ + EG I ++S++YGL ++
Sbjct: 370 QQWLSPGVVNYGALIDALCKLGRVDDA--VLKFNQMINEGVTPDIFVFSSLVYGLCTVDK 427
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKI---------LGFCVDGNVEDAKRCFDQMIEEGGVP 374
++A EKLF +D+ +++ C +G V +A+R D M+ P
Sbjct: 428 WEKA-------EKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRP 480
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+V+ Y+ L+ +C R+ EA++L+ M G P T+NT+L G C+ + A L
Sbjct: 481 DVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLF 540
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E + +G PG Y+ ++ L + G F A L + M+ D T+ +L
Sbjct: 541 REMLM---KGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIIL 594
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 225/507 (44%), Gaps = 42/507 (8%)
Query: 22 GRARM----INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI----DLARAFYRKKMM 73
GRAR ++D +K D + + S++ FN +L V+ + +L + + + +
Sbjct: 23 GRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIR 82
Query: 74 ASGVQ--GDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLCKNG 130
V+ TY IL+ C R+ GF ++K+ N+VI+ L+ LC
Sbjct: 83 ECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAK 142
Query: 131 KVGRARS-LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG---FVPDV 182
+V A L+ M E N ++++IL+ C E+ AL L+ G P+V
Sbjct: 143 RVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNV 202
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT T V++ LC V A + + ++G GK K + L+E
Sbjct: 203 VTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQE 262
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G P+ Y +L+ C+ G A ++F+ + GI + Y L+ G + G
Sbjct: 263 MSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGA 322
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+ + L LM + G +N + ++ DEA+ +M + L P V+
Sbjct: 323 LSEMHSFLDLM--VRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNY 380
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
I C G V+DA F+QMI EG P++ ++ L++ C ++ +A +L E+
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD 440
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G A+ FN ++ LCR+G V A +L++ +R R P Y+ L+ C G
Sbjct: 441 QGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVR---PDVISYNTLVDGHCLTGR 497
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A+ LL MV G+ PD T+N+LL
Sbjct: 498 IDEAAKLLDVMVSIGLKPDEFTYNTLL 524
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 216/490 (44%), Gaps = 58/490 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P +I+ ++ G ++++ DL+ R ++P IFN + + K+ ID A
Sbjct: 305 PHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHI 364
Query: 68 Y---RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ R++ ++ GV Y L+ LC RV D + M + GV P+ ++++L++
Sbjct: 365 FDKMRQQWLSPGV----VNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVY 420
Query: 125 SLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC K +A L ++ + N F+IL+C C+E ++ A L++ P
Sbjct: 421 GLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRP 480
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DV++ +++ C GR+ +A ++L+ M G P+ TYN
Sbjct: 481 DVISYNTLVDGHCLTGRIDEAAKLLDV-------------------MVSIGLKPDEFTYN 521
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ YC+ +D A +F +M + G++ VTY+T++ GL GR + ++ M ++
Sbjct: 522 TLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINN 581
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD------ 354
+ K I Y +L GL R N DEA K+F + L++ F ++
Sbjct: 582 RR--KCDIYTYTIILNGLCRNNFVDEAF-------KMFQSLCSKDLQLDIFTINIMIGAL 632
Query: 355 ---GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
G EDA F + G VP+V Y + +E + E EL M +G P +
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNS 692
Query: 412 STFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRG------SLPGSGHYSPLIKALCEK 462
N ++ L +G++G A L ++E + S+ Y L K+L EK
Sbjct: 693 RMLNALVRWLLHRGDIGRAGVYLSKLDEKNFSLEASTTSMLISIYSRAEYQQLAKSLPEK 752
Query: 463 GGFQSASMLL 472
F S+ L
Sbjct: 753 YRFPQRSLQL 762
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 165/362 (45%), Gaps = 29/362 (8%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVVTITKVLELLCSVGRVMDAVE 203
P+ T++ILI +C+ L + G+ + + V ++L+ LC RV +A +
Sbjct: 90 PSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATD 149
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
IL L+ M GC NV +YNIL+ C + AL++ + M
Sbjct: 150 IL------------------LRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMA 191
Query: 264 IDG---ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DG + N VTY T+I GLC +D + Q M D +G + Y +++G
Sbjct: 192 DDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMID--KGVRPNNHTYTCLIHGYLS 249
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ E ++ L++M L P V ++ + C +G +A+ FD +I +G P+V I
Sbjct: 250 TGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTI 309
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y L+H Y E + E + M +G P FN + + ++ + A+ + ++ M
Sbjct: 310 YGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDK-M 368
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
R + PG +Y LI ALC+ G A + QM+ +G+ PD ++SL+ L
Sbjct: 369 RQ--QWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVD 426
Query: 499 TW 500
W
Sbjct: 427 KW 428
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDID 62
SI PDE + T++ G +AR I+D + +TP + +N+IL L +
Sbjct: 510 SIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFC 569
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A+ Y M+ + + D YTY I++ GLC N V + FK+ + S+ ++ + N +
Sbjct: 570 EAKELYLN-MINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIM 628
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I +L K G+ A L + + P+ T+ ++ KE +L L G
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGT 688
Query: 179 VPDVVTITKVLELLCSVGRVMDA-VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P+ R+++A V L G+ GR G +L +++ K
Sbjct: 689 APN--------------SRMLNALVRWLLHRGDIGRAGV------YLSKLDEKNFSLEAS 728
Query: 238 TYNILISSY 246
T ++LIS Y
Sbjct: 729 TTSMLISIY 737
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 223/467 (47%), Gaps = 35/467 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
IQ P+ F+ V RA + D +K L+ + + P+L I N+ + +LV + +L
Sbjct: 277 IQLCPEAFGFVMV--SYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGN-ELK 333
Query: 65 RAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+A + ++M+ G+ + TY L+KG C ++V +L+ M S+G P+ V Y T++
Sbjct: 334 KALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVM 393
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC++ ++ R L+ M+ P+ VT++ LI K + AL +L+++ F
Sbjct: 394 GLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRF 453
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
D V + ++ C G++ A E++ EM KGC P+V T
Sbjct: 454 KVDKVEYSAIVHAYCKEGKIQKAKELVS-------------------EMFSKGCDPDVVT 494
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y ++ +C G LD A + M N VTY T + GLC G+ + K++ + E
Sbjct: 495 YTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSE 554
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+ E Y+ V++GL RE + +EA + +++M + FP V+ +L + C DG
Sbjct: 555 E--EWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGK 612
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+A + + + +G NVV + +IH +CQ++ + A L+ +M P T+
Sbjct: 613 PREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTA 672
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
++ L + + A +L M+ + +G +P Y +I C KG
Sbjct: 673 LIDALAKTDRIEEATELT---MKMLRQGLVPSPVTYRSVIHQYCRKG 716
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 47/380 (12%)
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEIL---EESGEQGRL-------------GKVK 218
+FGFV +V+ ++ GR+ DA+++L +++G + L ++K
Sbjct: 283 AFGFV--MVSYSRA-------GRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELK 333
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
RF + M G PNV TYN LI YC +D A+++ + M G S + V+Y T++
Sbjct: 334 KALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVM 393
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LC R+++ ++++ M+ + ++ YNS++ L + DEALE L++ EKL
Sbjct: 394 GLLCRDKRLNEIRELIKKMQTDSKLLPDHVT-YNSLIQMLSKHGHGDEALEILQEAEKLR 452
Query: 339 PRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ V+ S + +C +G ++ AK +M +G P+VV Y ++ +C+ ++ +A
Sbjct: 453 FKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAK 512
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---EEDMRGIGRGSLPGSGHYS 453
++M++M H P A T+ T L+GLCR G A K++ EE+ P + YS
Sbjct: 513 KMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEW------WTPNAITYS 566
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL-----SQQTTWLLLLLLNE 508
++ L +G A ++ +M+GKG P+ + N L+ L ++ LL +N+
Sbjct: 567 VVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNK 626
Query: 509 -----MVSFVMVVHELSAKE 523
+V+F V+H K+
Sbjct: 627 GCAVNVVNFTTVIHGFCQKD 646
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 6/206 (2%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F TVI G + + + D + N P + +++D L K D KM+
Sbjct: 635 FTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKML 694
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ TY ++ C RV D KLL M + + YN +I LCK G +
Sbjct: 695 RQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQTA--YNLVIEKLCKFGYLE 752
Query: 134 RARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A SL+ ++ + T +L+ +Y ++A + + F+ +PD+ KV
Sbjct: 753 EANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLCEKVS 812
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLG 215
+ L G++ +A ++ E+G +
Sbjct: 813 KRLVVEGKLEEADRLVLRFVERGHVS 838
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 218/468 (46%), Gaps = 34/468 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ + +L+ + K +M A G + TY +++ G+C RV D ++
Sbjct: 185 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 244
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L+ + S G +P+ V Y T++ LC + + L ++M + PN+VTF +L+ +C+
Sbjct: 245 LNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCR 304
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+ A+ +L++ G P+ V+ +C GRV DA + L G G
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
R G+ + L EM RK C PN T+N I C+ G+++ A+ + M
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G S VTY+ L+ G C GR+D L++ + + Y ++L GL +
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP-----CEPNTITYTTLLTGLCHAER 479
Query: 324 QDEALEYLKQM-EKLFP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
D A E L +M +K P AV ++ + FC G VE+A +QM+E G PN++ ++
Sbjct: 480 LDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 539
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE--EDMR 439
L+ ++ EA EL+ + G T+++V+ L R+ A++++ +DM
Sbjct: 540 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDM- 598
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
G P G Y+ ++ ALC++ A MV G +P+ T+
Sbjct: 599 ----GMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTY 642
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 210/448 (46%), Gaps = 63/448 (14%)
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEE 161
M RG +P+ V Y L+ ++CK+ G A +++ +M PN VT++++I C+E
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------- 212
+ +A +L + S+GF PD+V+ T VL+ LC+ R D + E ++
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296
Query: 213 -------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
R G V+ + L++M + GC PN NI+I++ C+ G +D A D N+M +
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356
Query: 266 GISWNFVTYDTLIRGLCSGGR-----------------------------------IDDG 290
G + + ++Y T++RGLC GR I+
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
+K+++LM + G I YN++++G + + D ALE + P + + + G
Sbjct: 417 IKLIELMPEY--GCSVGIVTYNALVHGFCVQGRVDSALELFNNL-PCEPNTITYTTLLTG 473
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C ++ A +MI++ N V ++ L+ +CQ+ V EA EL+ +M HG P
Sbjct: 474 LCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPN 533
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
TFNT+L G+ + N AL+L + G + +G + YS ++ L + + A
Sbjct: 534 LITFNTLLDGITKDCNSEEALEL----LHGLVSKGVSLDTITYSSVVDVLSREDRTEEAI 589
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+L + G+ P +N +L L ++
Sbjct: 590 QMLHAVQDMGMRPKVGMYNKILFALCKR 617
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 199/420 (47%), Gaps = 23/420 (5%)
Query: 9 PDESIFITVIRGLGRARMINDV-VKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + TV++GL AR +DV V ++V + P+ F+ ++ + +
Sbjct: 255 PDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDMLVRFFCRGGMVERAIQ 313
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M G + I++ +C RV D + L+ M G P+++ Y T++ LC
Sbjct: 314 VLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLC 373
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+ A+ L+ +M PN+VTF+ IC C++ + A+ L+E +G +V
Sbjct: 374 RAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIV 433
Query: 184 TITKVLELLCSVGRVMDAVEILEE-SGEQGRLG------------KVKGGCRFLKEMERK 230
T ++ C GRV A+E+ E + ++ L EM +K
Sbjct: 434 TYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQK 493
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C N T+N+L+S +C+ G ++ A+++ N M G + N +T++TL+ G+ ++
Sbjct: 494 DCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEA 553
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA-VDRSLKIL 349
L++L + SK S I+ Y+SV+ L RE++ +EA++ L ++ + R V KIL
Sbjct: 554 LELLHGLV-SKGVSLDTIT-YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKIL 611
Query: 350 -GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
C + A F M+ G +PN Y LI E ++EA ++ E+ G L
Sbjct: 612 FALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 124/281 (44%), Gaps = 25/281 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARA 66
PP+E F T I L + +I +K +L+ + + + +N+++ V+ +D A
Sbjct: 394 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 453
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + + TY L+ GLC R+ +LL M + N+V +N L+
Sbjct: 454 LFNNL----PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFF 509
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ G V A L++ M E PN +TF+ L+ K+ N AL LL S G D
Sbjct: 510 CQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDT 569
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR---------FLKE 226
+T + V+++L R +A+++L + G KV C+ F
Sbjct: 570 ITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAY 629
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
M GC+PN TY ILI G+L A V +++ G+
Sbjct: 630 MVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 5/202 (2%)
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
+ G + + Y +L + + + EA+ L +M P V ++ I G C +G V+
Sbjct: 180 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 239
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DAK +++ G P++V Y ++ C R + L EM +P TF+ ++
Sbjct: 240 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 299
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
CR G V A++++++ + G P + + +I A+C++G A L M
Sbjct: 300 RFFCRGGMVERAIQVLQQMSQ---HGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
G PD +++ ++L L + W
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRW 378
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G P T+ +L +C+ G A+ +++E MR +G P Y+ +I +C
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDE-MRA--KGCTPNIVTYNVIINGMCR 234
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-LLLLLLNEMVSFVMVVHELS 520
+G A +L ++ G PD +++ ++L L W + +L EMV V +E++
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 207/425 (48%), Gaps = 32/425 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D +Y+ ++ G CL + KL+ M+ +G+KPN YN++I LCK+GK
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V A ++ +M P+ V ++ LI +CK N+ A L ++ VPD + T
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
V+ LC G++M+A ++ +M +G P+ TY LI YC
Sbjct: 121 VICGLCRCGKMMEADKVF-------------------NKMFSRGVEPDEVTYTTLIDGYC 161
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
++G ++ A + N M G++ N VTY L GLC G++D ++L M +G +
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM--CGKGLQLN 219
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
I YNS++ GL + +A++ +++ME ++P + + + +C G + A
Sbjct: 220 ICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLR 279
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M++ G P V+ ++ L++ +C + + L+ M G +P +T+N+++ C +
Sbjct: 280 EMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRN 339
Query: 426 NVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
N ++ E +G+ RG +P S Y+ LIK C+ + A L +M KG
Sbjct: 340 N----MRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTA 395
Query: 485 LTWNS 489
++NS
Sbjct: 396 SSYNS 400
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 190/373 (50%), Gaps = 27/373 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M G++ + YTY ++ LC + +V D ++L M ++G+ P++V+Y TLI CK
Sbjct: 34 QEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKL 93
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + A L +ME+ P+ + ++ +IC C+ ++ A + K FS G PD VT
Sbjct: 94 GNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTY 153
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ C G + A + +M + G PNV TY L
Sbjct: 154 TTLIDGYCKSGEMEKAFSLH-------------------NQMVQSGLTPNVVTYTALADG 194
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G +D+A ++ ++M G+ N TY++L+ GLC G I +K+++ ME + G
Sbjct: 195 LCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVA--GMY 252
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ +++ + + +A E L++M L P + ++ + GFC+ G +ED +R
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M+E+G +PN Y+ L+ YC +R +E+ K M G +P ++T+N ++ G C+
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCK 372
Query: 424 QGNVGTALKLVEE 436
N+ A L +E
Sbjct: 373 ARNMKEAWFLHKE 385
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 214/451 (47%), Gaps = 26/451 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + TVI G + V+K + + P+L +NSI+ +L K +D A
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ M+ G+ D Y L+ G C + +KL M+ + + P+ + Y +I LC
Sbjct: 68 LRE-MINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ A + + M EP++VT++ LI YCK + A L + G P+VV
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T + + LC +G+V A E+L E +G + G ++ + ++EM
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E G P+ T+ L+ +YC+TG + A ++ +M G+ +T++ L+ G C G +
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+DG ++L M + +G + YNS++ N E K M + P + +
Sbjct: 307 EDGERLLAWMLE--KGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C N+++A +M E+G Y+ +I + +++++ EA EL +EM
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
G A +N + +GN+ TAL+L +E
Sbjct: 425 GMAADAEIYNLFVDISYGEGNMETALELCDE 455
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 160/327 (48%), Gaps = 36/327 (11%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PDVV+ + V+ C G + + + ++EM+ KG PN+
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVL-------------------KLIQEMQMKGLKPNL 45
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN +I C++G +D A V +M GI + V Y TLI G C G I K+
Sbjct: 46 YTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDE 105
Query: 297 MEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
ME K RI P Y +V+ GL R + EA + +M + P V + I G
Sbjct: 106 ME------KQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDG 159
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+C G +E A +QM++ G PNVV Y L C+ +V A+EL+ EM G G
Sbjct: 160 YCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLN 219
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+N++++GLC+ GN+ A+KL+EE G P + ++ L+ A C+ G A
Sbjct: 220 ICTYNSLVNGLCKSGNIRQAVKLMEEMEVA---GMYPDTITFTTLMDAYCKTGEMVKAHE 276
Query: 471 LLVQMVGKGILPDYLTWNSLL--ICLS 495
LL +M+ +G+ P +T+N L+ C+S
Sbjct: 277 LLREMLDRGLQPTVITFNVLMNGFCMS 303
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 172/371 (46%), Gaps = 35/371 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + VI GL R + + K + + + P + +++D K ++ +AF
Sbjct: 113 PDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSG-EMEKAFS 171
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ SG+ + TY L GLC +V +LLH M +G++ N YN+L++ LC
Sbjct: 172 LHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLC 231
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G + +A LM +ME P+ +TF+ L+ AYCK +V A LL + G P V+
Sbjct: 232 KSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVI 291
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C G + D G R L M KG +PN TYN L+
Sbjct: 292 TFNVLMNGFCMSGMLED-------------------GERLLAWMLEKGIMPNTTTYNSLM 332
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC + +++ M G+ + TY+ LI+G C + + + + M +++G
Sbjct: 333 KQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM--AEKG 390
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD-----GNVE 358
S YNS++ G +++ + EA E ++M + + +I VD GN+E
Sbjct: 391 FNLTASSYNSIIKGFFKKKKISEARELFEEMRR---EGMAADAEIYNLFVDISYGEGNME 447
Query: 359 DAKRCFDQMIE 369
A D+ IE
Sbjct: 448 TALELCDEAIE 458
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 222/491 (45%), Gaps = 33/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDIDLARA 66
P +F + L M+ + ++ + RF + P + N +L K + D+ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F K M+ +G + +TY I++ +C V L MK RG+ P++V YN++I
Sbjct: 250 F--KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G++ +M+ EP+ +T++ LI +CK L L + G P+V
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V+ + +++ C G + A+ +F +M R G +PN TY L
Sbjct: 368 VSYSTLVDAFCKEGMMQQAI-------------------KFYVDMRRVGLVPNEYTYTSL 408
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + C+ G L A + N+M G+ WN VTY LI GLC R+ + ++ M+ +
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA-- 466
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G ++ YN++++G + D ALE L +++ + P + I G C +E A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K ++M E G N +IY L+ AY + E L+ EM TF ++ G
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC+ V A+ G + + ++ +I LC+ ++A+ L QMV KG+
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQA--NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 481 LPDYLTWNSLL 491
+PD + SL+
Sbjct: 645 VPDRTAYTSLM 655
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 225/482 (46%), Gaps = 39/482 (8%)
Query: 34 TDLVSRF-------NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYA 85
TD V RF P++ +N ++D + KE D++ AR + ++M G+ D TY
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF-EEMKFRGLVPDTVTYN 301
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
++ G R+ D MK +P+ + YN LI+ CK GK+ +M+
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+PN V++S L+ A+CKE + A+ G VP+ T T +++ C +G + DA
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 202 VEILEESGEQG-------RLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISS 245
+ E + G + G C +M+ G +PN+ +YN LI
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ + +D AL++ N++K GI + + Y T I GLCS +I+ ++ M++ G K
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC--GIK 539
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
Y +++ ++ E L L +M++L + +L G C + V A
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 364 FDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F+++ + G+ N I+ +I C++ +V A+ L ++M G +P + + +++ G
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 423 RQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+QGNV AL L + M IG + L Y+ L+ L Q A L +M+G+GI
Sbjct: 660 KQGNVLEALAL-RDKMAEIGMKLDLLA---YTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 482 PD 483
PD
Sbjct: 716 PD 717
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 194/449 (43%), Gaps = 68/449 (15%)
Query: 50 NSILD--VLVKEDIDLARAFYR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
NS+L VL K D D+ + + + G D +++L+ + + +
Sbjct: 162 NSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSK 217
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
MK V P + N L+H K GK + DM P T++I+I CKE +
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A L E+ G VPD VT +++ VGR+ D V C
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV------------------C- 318
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F +EM+ C P+V TYN LI+ +C+ G L L+ + +MK +G+ N V+Y TL+ C
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
G + +K M R+ L E + +
Sbjct: 379 KEGMMQQAIKFYVDMR--------RVG---------------------LVPNEYTYTSLI 409
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
D + KI GN+ DA R ++M++ G NVV Y LI C ER++EA EL +M
Sbjct: 410 DANCKI------GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G +P +++N ++ G + N+ AL+L+ E GRG P Y I LC
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK---GRGIKPDLLLYGTFIWGLCSL 520
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++A +++ +M GI + L + +L+
Sbjct: 521 EKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 172/398 (43%), Gaps = 26/398 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P++ +++++D KE + + M G+ ++YTY L+ C + D F
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L + M GV+ N V Y LI LC ++ A L M+ PN +++ LI +
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
K +N+ AL LL + G PD++ + LCS L K+
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS-------------------LEKI 523
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ + EM+ G N Y L+ +Y ++G L + ++MK I VT+ L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
I GLC + + + + G + + + +++ GL ++NQ + A +QM +
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDF-GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
L P + + G GNV +A D+M E G +++ Y L+ ++++A
Sbjct: 643 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
++EM G G P +VL G + A++L
Sbjct: 703 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 213/449 (47%), Gaps = 32/449 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P F T+I GLG+ V+ D + P + +I++ L K + LA
Sbjct: 43 PTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGL 102
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KKM +G Q + TY+ L+ LC RV + + MK++ + P Y +LI LC
Sbjct: 103 F-KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLC 161
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A +L+++M PN VTF++L+ +CKE ++ A +L+ G PDVV
Sbjct: 162 NFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVV 221
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +M + E E +L V M KGC P+V +Y+ILI
Sbjct: 222 TYNS----------LMYGYSMWTEVVEARKLFDV---------MITKGCKPDVFSYSILI 262
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+ +D A +FN+M G + N V+Y+TLI GLC GR+ + + + M + G
Sbjct: 263 NGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTN--G 320
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAK 361
+ + Y +L G ++ +A + M+ + P V ++ + C GN++DA+
Sbjct: 321 NLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAR 380
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F ++ G PNV IY +I+ C+E + EA E + M G P ++N ++ G
Sbjct: 381 ELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGF 440
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ + A+ L+ E MR RG + +G
Sbjct: 441 LQHKDESRAVHLIGE-MR--DRGFITDAG 466
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 183/399 (45%), Gaps = 56/399 (14%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN T +ILI +C+ + + +L K G P +VT T ++ L VG+ AVE+
Sbjct: 8 PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67
Query: 205 LEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ +G ++G+ K+ME GC NV TY+ LI S C+
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED--------- 299
++ ALD+F+ MK IS TY +LI+GLC+ R + +L M
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187
Query: 300 ------------------------SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM- 334
++ G + + YNS++YG + EA + M
Sbjct: 188 FNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMI 247
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ P S+ I G+C +++AK+ F++MI +G PN V Y+ LIH CQ R+R
Sbjct: 248 TKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLR 307
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHY 452
EA +L K M +G LP T+ +L G C+QG +G A +L R + L P Y
Sbjct: 308 EAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL----FRAMQSTYLKPNLVMY 363
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ L+ A+C+ G + A L ++ G+ P+ + +++
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 108/239 (45%), Gaps = 7/239 (2%)
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M++ G+S N T + LI C R+D G +L + K G + I + +++ GL +
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLA--KGIKLGLQPTIVTFTTLINGLGKV 58
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ +A+E M P + I G C G A F +M E G NVV Y
Sbjct: 59 GKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTY 118
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
LIH+ C+ RV EA ++ M P T+ +++ GLC A L+ E M
Sbjct: 119 STLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNE-MT 177
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
+ +P ++ L+ C++G +A +L M G+ PD +T+NSL+ S T
Sbjct: 178 SLN--IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 223/462 (48%), Gaps = 35/462 (7%)
Query: 43 TPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
TP + FN IL LVK A + +R+ + +G++ T ILM C T + F
Sbjct: 7 TPPILQFNHILASLVKINHYPTAISLFRQ-LEFNGIKPSIVTLTILMNCYCHTGGITFLF 65
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAY 157
+L + G +PNS+ + TLI +C NG+ A +++ + + V+++IL+
Sbjct: 66 SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGL 125
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK A+ +L K++ DVV + +++ LC V DA
Sbjct: 126 CKMGETRAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAY--------------- 167
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
R EM KG PNV T++IL+ + C+ A+++ M G+ N VTY +
Sbjct: 168 ----RLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAI 223
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
+ G C +++ L I +M +EG + + YN ++ GL ++ + DEA+ K+M +
Sbjct: 224 MDGYCLVNQVNKALNIFNVM--VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWK 281
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
K+ P V ++ I G C G + + D+M G +++ Y+ L+HA C+ + +A
Sbjct: 282 KINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQA 341
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L+KE+ G P T+ T++ GLC+ G + A + +E + G Y+ +
Sbjct: 342 ITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILT---EGYHITVWTYNVM 398
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
I LC+KG F A LL +M +PD +++ +++ LS++
Sbjct: 399 INGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEK 440
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 191/384 (49%), Gaps = 31/384 (8%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ ++A G + D +YAILM GLC ++G+ + +++ V + V+Y+T+I SL
Sbjct: 101 LFHDHVVAHGFKLDQVSYAILMNGLC---KMGETRAAMQMLRKTWVNADVVMYSTIIDSL 157
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK V A L S+M PN TFSIL+ A CK+ A+ LL G P+V
Sbjct: 158 CKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNV 217
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ C V +V A+ I M ++G PNV YNI+
Sbjct: 218 VTYGAIMDGYCLVNQVNKALNIFNV-------------------MVQEGVEPNVWCYNII 258
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ C+ +D A+++F +M I+ + VTY+ LI GLC G+I L+++ M
Sbjct: 259 INGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSI-- 316
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G I YNS+L+ L + + D+A+ +K++ + + P + I G C DG +EDA
Sbjct: 317 GKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDA 376
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F +++ EG V Y+ +I+ C++ EA L+ M + +P A ++ T++
Sbjct: 377 YVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYA 436
Query: 421 LCRQG-NVGTALKLVEEDMRGIGR 443
L +G V T L +RG+ +
Sbjct: 437 LSEKGETVKTNKLLCAMIVRGLSK 460
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 161/342 (47%), Gaps = 28/342 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D ++ T+I L + + + D + + + P++ F+ ++D L K+
Sbjct: 146 DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLL 205
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
MM GV+ + TY +M G CL N+V + +VM GV+PN YN +I+ LCK
Sbjct: 206 AMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKK 265
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A +L +M P+ VT++ILI CK + +L L+++ S G D++T
Sbjct: 266 KRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITY 325
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+L LC + A+ + +KE++ +G PNV TY LI
Sbjct: 326 NSLLHALCKNHHLDQAITL-------------------VKEIKDQGIQPNVCTYTTLIDG 366
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G L+ A +F ++ +G TY+ +I GLC G D+ L +L MED+
Sbjct: 367 LCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDN--ACI 424
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
Y +++Y L +++ E ++ K + + R + + LK
Sbjct: 425 PDAVSYETIIYAL---SEKGETVKTNKLLCAMIVRGLSKRLK 463
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 235/501 (46%), Gaps = 39/501 (7%)
Query: 42 MTPSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P+L+ +N +L L V+ D+D A + + G+ D TY+ LM G NR+ +
Sbjct: 155 IAPNLQTYNIMLRSLCVRGDLDRAVTLF-DSLRCRGLAPDRITYSTLMSGFVKNNRLDNA 213
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-----EEPNDVTFSILIC 155
LL M S V+P++V YN L+ +NG+ +A + + PN T+++++
Sbjct: 214 LYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLD 273
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
CK A + E+ + PD++T ++ LC V A + E + G
Sbjct: 274 GLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVP 333
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
G+V +F M G + NV +YNI++ + G++D A D++
Sbjct: 334 DVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG-IRNVTSYNIMLKGLFDGGMVDKATDLW 392
Query: 260 NDM-KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+ K D +S + VT+ T+I GLC G + L+IL+ E G + Y+S++ GL
Sbjct: 393 ELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILE--EARTSGKELDEFSYSSMISGL 450
Query: 319 YRENQQDEALEYLKQ--MEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
++ + D+A++ ++ M+ P + + I GFC DA R + QM E P
Sbjct: 451 CKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTT 510
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ Y+ LIH C+ E+ EAS +EM G + +T+ +++ GLCR + AL L +
Sbjct: 511 ITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQ 570
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK-GILPDYLTWNSLLI--- 492
+ +G ++ LI LC G AS LL +M K P+ +T+N+L+
Sbjct: 571 IL---DKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFY 627
Query: 493 ---CLSQQTTWLLLLLLNEMV 510
C + + + +L N +V
Sbjct: 628 ETGCFDKAASLWMAILENGLV 648
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 235/501 (46%), Gaps = 37/501 (7%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKE 59
MP S + PD + ++ G R ++ + LV +P+L +N +LD L K
Sbjct: 220 MP-SYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKL 278
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ ++M+A+ Q D TY ++ GLC + V ++ M G+ P+ VIY
Sbjct: 279 GMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIY 338
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEP---NDVTFSILICAYCKE---ENLVNALVLLEKS 173
N+L+ C G+VG A M N +++I++ + + LLEK
Sbjct: 339 NSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKD 398
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
S PD+VT + ++ LC G +++ILEE+ G KE++
Sbjct: 399 DSLS--PDMVTFSTMIHGLCEKGFANKSLQILEEARTSG------------KELDEF--- 441
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
+Y+ +IS C+ G LD A+ ++ + +D N Y+ LI G C + D +++
Sbjct: 442 ----SYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRV 497
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GF 351
M ++ + S I+ YN++++GL + + EA + ++M EK V+ ++ G
Sbjct: 498 YSQMAEN-DCSPTTIT-YNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGL 555
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT-GHGYLPI 410
C D ++ A ++Q++++G +VV+++ LIH C +V EAS+L+ EM + P
Sbjct: 556 CRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPN 615
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+NT++ G G A L M + G +P Y+ IK LC
Sbjct: 616 VVTYNTLMDGFYETGCFDKAASLW---MAILENGLVPDIISYNTRIKGLCSCNRTPEGVQ 672
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
LL +M+ GI+P +TWN L+
Sbjct: 673 LLNEMLASGIIPTAITWNILV 693
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 200/444 (45%), Gaps = 29/444 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + ++ GL + M + + + N P + + +++ L + D+D A
Sbjct: 263 PNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARV 322
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +M+ +G+ D Y L+KG C RVG+ +K M G++ N YN ++ L
Sbjct: 323 Y-SEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLF 380
Query: 128 KNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G V +A L +E+ P+ VTFS +I C++ +L +LE++ + G D
Sbjct: 381 DGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDE 440
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
+ + ++ LC GR+ DAV++ E+ + K R +
Sbjct: 441 FSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQ 500
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M C P TYN LI C+ A +M G + TY +LIRGLC +
Sbjct: 501 MAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKK 560
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVD 343
ID L + + D +G + + +N +++GL + DEA + L +M++ P V
Sbjct: 561 IDGALALWNQILD--KGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT 618
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ + GF G + A + ++E G VP+++ Y+ I C R E +L+ EM
Sbjct: 619 YNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEML 678
Query: 404 GHGYLPIASTFNTVLSGLCRQGNV 427
G +P A T+N ++ + + G +
Sbjct: 679 ASGIIPTAITWNILVRAVIKYGPI 702
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM------EKLFPRAVDRSLKILGFCVDGN 356
G + +N++L R + +A + + ++ P ++ + CV G+
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ A FD + G P+ + Y L+ + + R+ A L+ EM + P A +N
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L G R G A+++ E+ +R G+ P Y+ ++ LC+ G F+ A + +MV
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVR--DPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMV 292
Query: 477 GKGILPDYLTWNSLLICLSQQT 498
PD +T+ +++ L + T
Sbjct: 293 ANNHQPDMITYGTMIHGLCRST 314
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 202/413 (48%), Gaps = 30/413 (7%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
++++ G C + RV +LL M GVK N++ YN+L+ + + R ++ ME
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
EP T++IL+ ++ + E+ S DV + V+ C G V
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A E+ +E +G G PN TY LI+ +C+ G +++A +
Sbjct: 267 ASEVFDEC-----VG--------------NGIEPNEHTYGALINGFCKIGQMEAAEMLVT 307
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DM++ G+ N + ++T+I G C +D L+I +ME K G + + YN++ GL R
Sbjct: 308 DMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIME--KMGIELDVYTYNTLACGLRR 365
Query: 321 ENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
N+ DEA L+ M EK + P V + I C +G++ +A+R F +M G P++V
Sbjct: 366 ANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 425
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ ++ Y ++ +REA KEM G +P ++ ++ G C G V AL+L EE
Sbjct: 426 YNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMK 485
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ RGS P Y+ LI L ++G + A L M+G G+ PD +++L+
Sbjct: 486 Q---RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 191/426 (44%), Gaps = 31/426 (7%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P S+ +P S+ V+ G ++ + + D + R + + +NS+LD +E
Sbjct: 138 PDSV-TPLSASV---VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKD 193
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A K M G++ TY IL+ GL + + MKS+ + + Y++
Sbjct: 194 DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSS 253
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I++ C+ G V RA + + EPN+ T+ LI +CK + A +L+ G
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ + +++ C V A+EI + + ME+ G +V
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEI-----------------KMI--MEKMGIELDVY 354
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN L +D A ++ M G+ N V+Y TLI C+ G + + ++ + M
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ G++ + YN ++ G ++ EA + K+MEK L P + + G CV+G
Sbjct: 415 --AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNG 472
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A R F++M + G PN+V Y LI +E R EA +L M G G P + ++
Sbjct: 473 KVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYS 532
Query: 416 TVLSGL 421
++ L
Sbjct: 533 ALVGSL 538
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 222/477 (46%), Gaps = 33/477 (6%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDV---LVKEDI 61
+Q PP F ++ + + + + ++ + + F + P++ + +++ L + I
Sbjct: 55 MQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKI 114
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
A + KM+ G + D TY L+ GLC +LL M + +PN YNT
Sbjct: 115 GEALHLF-DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 173
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I SLCK+ +V A +L S+M P+ T++ LI A C + LL +
Sbjct: 174 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 233
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+PDVV+ V++ LC G+V +A ++++ K ++R GC+PNV
Sbjct: 234 IMPDVVSFNTVVDALCKEGKVTEAHDVVD------------------KMIQRGGCMPNVI 275
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+YN LI+ YC+ +D A+ +F +M + + VTY TLI GLC R+ D + + M
Sbjct: 276 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 335
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDG 355
+ + Y +L L + EA+ LK +E L P ++ I G C G
Sbjct: 336 VACSQIPN--LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 393
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+E A+ F + +G P+V Y +I+ C+ + EAS+L +EM +G +N
Sbjct: 394 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 453
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+ G R A++L++E + RG + + +K L + G QS +L
Sbjct: 454 TITRGFLRNNETSRAIQLLQE---MVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 507
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 182/398 (45%), Gaps = 34/398 (8%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
S+ +NT+ +G + ++ P+ V F+ L+ + K ++ L L + S
Sbjct: 36 SLHFNTI------DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89
Query: 176 FGFVPDVVTITKVLELLCSV--GRVMDAVEILEESGEQG----------------RLGKV 217
FG P++ T+ ++ C + G++ +A+ + ++ +G ++G
Sbjct: 90 FGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNT 149
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
R L M +K C PNV YN +I S C+ + A ++F++M GIS + TY++L
Sbjct: 150 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSL 209
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
I LC+ +L M DSK + +N+V+ L +E + EA + + +M +
Sbjct: 210 IHALCNLCEWKHVATLLNEMVDSKIMPD--VVSFNTVVDALCKEGKVTEAHDVVDKMIQR 267
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
P + + I G+C ++ A F +M + +P+ V Y LIH C ER+++
Sbjct: 268 GGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQD 327
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYS 453
A L EM +P T+ +L LC+ + A+ L ++ I +L P +
Sbjct: 328 AIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMAL----LKAIEGSNLDPDIQVNN 383
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I +C G ++A L + KG+ PD T++ ++
Sbjct: 384 IAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 421
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEER--VREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
QM G PN+ LI+++C R + EA L +M G G+ P T+ T+++GLC+
Sbjct: 86 QMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 145
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
GN A++L+ + + P Y+ +I +LC+ A L +MV KGI PD
Sbjct: 146 VGNTSAAIRLLGS---MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPD 202
Query: 484 YLTWNSLLICLSQQTTW-LLLLLLNEMV 510
T+NSL+ L W + LLNEMV
Sbjct: 203 IFTYNSLIHALCNLCEWKHVATLLNEMV 230
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC--VDGNVEDAKRCFDQ 366
+N +L + + L QM+ + P + I FC G + +A FD+
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDK 123
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MI EG P+VV Y LI+ C+ A L+ M P +NT++ LC+
Sbjct: 124 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 183
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
V A L E + +G P Y+ LI ALC ++ + LL +MV I+PD ++
Sbjct: 184 VTEAFNLFSE---MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 240
Query: 487 WNSLLICLSQQ 497
+N+++ L ++
Sbjct: 241 FNTVVDALCKE 251
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 225/494 (45%), Gaps = 33/494 (6%)
Query: 26 MINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDIDLARAFYRKKMMASGVQGDDYT 83
M+ + ++ + RF + P + N +L K + D+ R F K M+ +G + +T
Sbjct: 75 MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF--KDMIGAGARPTVFT 132
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y I++ +C V L MK RG+ P++V YN++I K G++ +M+
Sbjct: 133 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 192
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
EP+ +T++ LI +CK L L + G P+VV+ + +++ C G +
Sbjct: 193 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 252
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A+ +F +M R G +PN TY LI + C+ G L A +
Sbjct: 253 QAI-------------------KFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 293
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
N+M G+ WN VTY LI GLC R+ + ++ M+ + G ++ YN++++G
Sbjct: 294 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA--GVIPNLASYNALIHGFV 351
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ D ALE L +++ + P + I G C +E AK ++M E G N +
Sbjct: 352 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 411
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
IY L+ AY + E L+ EM TF ++ GLC+ V A+
Sbjct: 412 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 471
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G + + ++ +I LC+ ++A+ L QMV KG++PD + SL+ +Q
Sbjct: 472 SNDFGLQA--NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ 529
Query: 498 TTWLLLLLLNEMVS 511
L L L + ++
Sbjct: 530 GNVLEALALRDKMA 543
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 229/490 (46%), Gaps = 39/490 (7%)
Query: 34 TDLVSRF-------NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYA 85
TD V RF P++ +N ++D + KE D++ AR + ++M G+ D TY
Sbjct: 111 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF-EEMKFRGLVPDTVTYN 169
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
++ G R+ D MK +P+ + YN LI+ CK GK+ +M+
Sbjct: 170 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 229
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+PN V++S L+ A+CKE + A+ G VP+ T T +++ C +G + DA
Sbjct: 230 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 289
Query: 202 VEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ E + G ++K +M+ G +PN+ +YN LI
Sbjct: 290 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 349
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ + +D AL++ N++K GI + + Y T I GLCS +I+ ++ M++ G K
Sbjct: 350 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC--GIK 407
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
Y +++ ++ E L L +M++L + +L G C + V A
Sbjct: 408 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 467
Query: 364 FDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F+++ + G+ N I+ +I C++ +V A+ L ++M G +P + + +++ G
Sbjct: 468 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 527
Query: 423 RQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+QGNV AL L + M IG + L Y+ L+ L Q A L +M+G+GI
Sbjct: 528 KQGNVLEALAL-RDKMAEIGMKLDLLA---YTSLVWGLSHCNQLQKARSFLEEMIGEGIH 583
Query: 482 PDYLTWNSLL 491
PD + S+L
Sbjct: 584 PDEVLCISVL 593
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 233/511 (45%), Gaps = 35/511 (6%)
Query: 11 ESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
++ F T+I+ L + + K +V TP++ +FN +++ K +D+D A
Sbjct: 148 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 207
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M+ G + +T+ IL+ GLC NRVG+ +LL M + G PN V Y+T+I+ LCK
Sbjct: 208 -EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCK 266
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V A L ME PN VT +ILI CK + + A L + G PD++T
Sbjct: 267 QGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIIT 326
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFLKEM 227
+++ LC +V +A ++ + E G LG++ CR +
Sbjct: 327 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 386
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG P++ TY LI YC+T +++ +M G T ++ GL G
Sbjct: 387 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 446
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-----EKLFPRAV 342
+ +++ M + G YN V+ G+ R ++ ++AL L+Q+ K P +
Sbjct: 447 ERAIQLFDSM--AARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSS 504
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ C G +DAK+ +M E G V Y+ L+ + +R EA+++ + M
Sbjct: 505 AVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P ST N V+S LC V A +LV+ R G P + LI C+
Sbjct: 565 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQ---RMSKLGCCPDIETCNTLIGGYCKS 621
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
G A LL +M G+ P+ T + LL C
Sbjct: 622 GRADLARKLLEEMTEAGLEPNDTTHD-LLEC 651
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 140/532 (26%), Positives = 240/532 (45%), Gaps = 67/532 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKK 71
+ T+++GL A + + ++ +++ + P + + +++ L K D A+ R+
Sbjct: 46 VHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLRE- 103
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC-KNG 130
M+A G D T++ L+ GLC F++L + RG+ + + T+I LC K
Sbjct: 104 MIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYN 163
Query: 131 KVGRARSLM----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V A ++ + P + F+++I +CK ++L +A LLE G VP+V T T
Sbjct: 164 SVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFT 223
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ LC RV +A ++LE+ M GC PNV TY+ +I+
Sbjct: 224 ILITGLCKANRVGEAQQLLEK-------------------MVTGGCSPNVVTYSTVINGL 264
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G +D A ++F M+ N VT++ LI GLC RI++ ++ M ++ G
Sbjct: 265 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET--GCAP 322
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKL---FPRAVDRSLKILGFCVDGNVEDAKRC 363
I YNS++ GL + Q DEA + + + + AV S G+ G + DA R
Sbjct: 323 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 382
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST---------- 413
F ++++G P++ Y LI YC+ R E EL++EM G+ P +T
Sbjct: 383 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 442
Query: 414 -------------------------FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+N V+ G+ R AL ++E+ + R P
Sbjct: 443 GNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPS 502
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
S L+++LC+ G A LL +M +G ++N LL LS+ W
Sbjct: 503 SSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRW 554
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 194/435 (44%), Gaps = 47/435 (10%)
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
MA + +TY IL++G + +LL MKS G + N+V++ TL+ LC G+V
Sbjct: 1 MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60
Query: 133 GRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A R++ D P+ +T++ L+ A CK A +L + + G PD VT + +
Sbjct: 61 VEALEHFRAMAKDCA-PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT-YNILISSYC 247
++ LC G A +LE+ ++G + N D + +I C
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRG--------------------MGNSDAAFETIIQRLC 159
Query: 248 -ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ ++ A V + G + + ++ +I G C +D K+L++M ++G
Sbjct: 160 NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVM--IEKGCVP 217
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ + ++ GL + N+ EA + L++M P V S I G C G V+DA F
Sbjct: 218 NVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELF 277
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
M PNVV ++ LI C+ +R+ EA +L M G P T+N+++ GLC+
Sbjct: 278 QLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKS 337
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSG-------HYSPLIKALCEKGGFQSASMLLVQMVG 477
V A +L + ++P SG YS L G A + +V
Sbjct: 338 FQVDEAFQLFQ---------TIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVD 388
Query: 478 KGILPDYLTWNSLLI 492
KG PD T+ SL++
Sbjct: 389 KGFSPDLATYTSLIL 403
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 175/358 (48%), Gaps = 30/358 (8%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN T+ ILI + +L A+ LLE+ S GF + V T +++ LC GRV++A+E
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
K C P+V TY L+ + C+ G D A + +M
Sbjct: 67 FRAMA--------------------KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIA 106
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL-YRENQ 323
G + + VT+ TLI GLC G + ++L+ + + G + + +++ L + N
Sbjct: 107 RGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE--DVIQRGMGNSDAAFETIIQRLCNKYNS 164
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ A + L + + P + +L I GFC +++ A + + MIE+G VPNV +
Sbjct: 165 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 224
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI C+ RV EA +L+++M G P T++TV++GLC+QG V A +L + R
Sbjct: 225 LITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER-- 282
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
R P ++ LI LC+ + A L +M G PD +T+NSL+ +C S Q
Sbjct: 283 -RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 339
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 198/413 (47%), Gaps = 31/413 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K DIDLA
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A+ ++ + Y+ ++ LC D L M+++GV+PN + Y++LI LC
Sbjct: 248 L-NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L+SDM E PN VTF+ LI A+ KE LV A L ++ PD+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A + E M K C PNV TYN LI
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTYNTLI 407
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ +D +++F +M G+ N VTY TLI G D+ + + M +G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM--VSDG 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ I G C G VED
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
F + +G P+V+IY+ +I +C++ EA L ++M G LP + T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 33/405 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L++ ME E N V +S +I + CK + +AL L + + G P+V+T +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ R DA +L + E+ + GK+ + EM ++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M N VTY+TLI G C RID+G
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G Y ++++G ++ D A KQM + + P + + +
Sbjct: 420 VELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A F+ + P + Y+ +I C+ +V + +L ++ G
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 409 PIASTFNTVLSGLCRQG---NVGTALKLVEEDMRGIGRGSLPGSG 450
P +NT++SG CR+G + + ED G LP SG
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMRED------GPLPDSG 576
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 76/449 (16%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ G+ N YN LI+ C+ ++ A +L+ M EP+ VT S L+ YC +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------- 212
+ +A+ L+++ G+ PD +T T ++ L + +AV +++ ++G
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 213 ------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+ G + L +ME NV Y+ +I S C+ D AL++F +M+ G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ N +TY +LI LC+ R D ++L M + K + +N+++ +E + E
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN--VVTFNALIDAFVKEGKLVE 348
Query: 327 ALEYLKQMEKLFPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
A EKL+ + RS+ I GFC+ +++AK F+ MI + PNVV
Sbjct: 349 A-------EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 378 IYDCLIHAYCQEERVREASELMKEMTG--------------HGYL--------------- 408
Y+ LI+ +C+ +R+ E EL +EM+ HG+
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 409 ------PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P T+NT+L GLC+ G + A+ + E R P Y+ +I+ +C+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME---PTIYTYNIMIEGMCKA 518
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + L + KG+ PD + +N+++
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 126/316 (39%), Gaps = 50/316 (15%)
Query: 192 LCSVGRVM-----DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+C GR D EIL +L G M + LP++ +N L+S+
Sbjct: 39 MCYWGRAFSSGSGDYREILRNGLHSMKLDDAIG---LFGGMVKSRPLPSIFEFNKLLSAI 95
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ D + + M+ GIS N TY+ LI C
Sbjct: 96 AKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC------------------------ 131
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCF 364
R +Q AL L +M KL P V S + G+C + DA
Sbjct: 132 -------------RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
DQM+E G P+ + + LIH + EA L+ M G P T+ V++GLC++
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G++ A L+ + ++ YS +I +LC+ A L +M KG+ P+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVV---IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 485 LTWNSLLICLSQQTTW 500
+T++SL+ CL W
Sbjct: 296 ITYSSLISCLCNYERW 311
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 209/439 (47%), Gaps = 31/439 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
+ F +++R RA + + +K ++ ++PS+ FNS+L +L+K ++A+ Y
Sbjct: 148 EARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVY 207
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV D +T+ IL++G C+ V DGF++ + + G +P+ V YNTL+ LC+
Sbjct: 208 DEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCR 267
Query: 129 NGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
GKV A +++ M + PN VT++ LI YC + + AL + E+ + G +
Sbjct: 268 AGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANN 327
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T +++ LC + +ILE + G P+ T+N L
Sbjct: 328 ITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS------------------PDTCTFNTL 369
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QLMED-- 299
+ +C G LD AL VF M I + TY L+R LC GG + +L +L+E
Sbjct: 370 MHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429
Query: 300 --SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFPRAVDRSLKILGFCVDGN 356
S +G K ++ YN + L + +A + +Q M + I+G C +G
Sbjct: 430 LLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGT 489
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
E M+ + +P+ Y+ LI+ ++ A + +++M + P +STF++
Sbjct: 490 FESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHS 549
Query: 417 VLSGLCRQGNVGTALKLVE 435
+L+ L QG + L++
Sbjct: 550 ILAKLLEQGRTSESASLIQ 568
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 224/501 (44%), Gaps = 90/501 (17%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF-YRKKMM 73
TV++ LG R + ++ + T + + + S+L++L + ++ AR F + +
Sbjct: 81 TVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140
Query: 74 ASG-VQGDDYTYAILMKGLCLTNRVG---DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ G V+ + + LM+ NR G + K+ +MKS GV P+ V +N+L+ L K
Sbjct: 141 SRGIVKLEARFFNSLMRNF---NRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKR 197
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ A+ + +M P+ TF+ILI +C + + + FG PDVVT
Sbjct: 198 GRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVT 257
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC--LPNVDTYNIL 242
+++ LC R GKV +K M +K PNV TY L
Sbjct: 258 YNTLVDGLC-------------------RAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTL 298
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I YC ++ AL VF +M G+ N +TY+TLI+GLC + + KI ++E +
Sbjct: 299 IRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE---KIKDILEGT-- 353
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
G SP +N++++ C GN++
Sbjct: 354 AGDGTFSPDTCTFNTLMHC---------------------------------HCHAGNLD 380
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM-------TGHGYLPIA 411
DA + F++M E P+ Y L+ + CQ +A +L+ ++ +G G P+
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASM 470
+ +N + LC G A K + MR RG+ P S Y LI C++G F+S
Sbjct: 441 AAYNPIFKYLCETGKTKKAEKAFRQLMR---RGTQDPPS--YKTLIMGHCKEGTFESGYE 495
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
LLV M+ K LPD+ T+ SL+
Sbjct: 496 LLVLMLRKDFLPDFETYESLI 516
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 24/334 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +IRG M++D + + +SRF P + +N+++D L + + A+
Sbjct: 218 PDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAG-KVTVAYN 276
Query: 69 RKKMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K M + + TY L++G C + + M ++G+K N++ YNTLI
Sbjct: 277 VVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKG 336
Query: 126 LCKNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC+ K + + ++ P+ TF+ L+ +C NL +AL + E+ P
Sbjct: 337 LCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQP 396
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T + ++ LC G A ++L++ E+ L + GC P V YN
Sbjct: 397 DSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL------------LSGDGCKPLVAAYN 444
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+ CETG A F + G + + +Y TLI G C G + G ++L LM
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLM--L 501
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
++ Y S++ GL ++ AL+ L++M
Sbjct: 502 RKDFLPDFETYESLINGLLHMDKPLLALQSLEKM 535
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 153/422 (36%), Gaps = 104/422 (24%)
Query: 14 FITVIRGLGRARM---INDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYR 69
+ T+I+GL AR I D+++ T F +P FN+++ ++D A +
Sbjct: 330 YNTLIKGLCEARKFEKIKDILEGTAGDGTF--SPDTCTFNTLMHCHCHAGNLDDALKVF- 386
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-------GVKPNSVIYNTL 122
++M +Q D TY+ L++ LC LL + R G KP YN +
Sbjct: 387 ERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPI 446
Query: 123 IHSLCKNGKVGRA----RSLMSD-MEEPNDVTFSILICAYCKE----------------- 160
LC+ GK +A R LM ++P ++ LI +CKE
Sbjct: 447 FKYLCETGKTKKAEKAFRQLMRRGTQDP--PSYKTLIMGHCKEGTFESGYELLVLMLRKD 504
Query: 161 --------ENLVN----------ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
E+L+N AL LEK P+ T +L L GR ++
Sbjct: 505 FLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESA 564
Query: 203 EILE---ESGEQGRLGKVKGGCRFL-------------------------KEMERKGC-- 232
+++ + + L G R L +E+ R C
Sbjct: 565 SLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHC 624
Query: 233 ------------------LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
++D N +I CE L A ++ + G+
Sbjct: 625 RKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQ 684
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ L L +G ++++ + + ME + G ++S N + + L + +EA K+M
Sbjct: 685 NQLKVSLEAGEKLEEAEFVSKRMEPVEMGVHQQLSCQNQLKFSLKAGGKLEEAESVQKRM 744
Query: 335 EK 336
E+
Sbjct: 745 ER 746
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 217/455 (47%), Gaps = 32/455 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+++ NS+L + +K + A +M ++ YT+ I++ LC ++
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ M++ GVKPN V YNT++H C +G+V A ++++ M+ EP+ T+ LI CK
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ L A + E+ G P V +++ C+ G + A
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA------------------ 345
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ EM +KG P + TYN LI + D A + +++ GIS + +TY+ LI
Sbjct: 346 -SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Query: 280 GLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G C R + K L ++ G K Y S+L+ L ++N+ EA + K++ E
Sbjct: 405 GYC---RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P A+ + I G C + NV+ A M P+ V ++ ++ +C+E +V EA
Sbjct: 462 VLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
EL EM G P +FNT++SG R+G++ A ++ E + G P Y+ L+
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNE---MLDTGFNPTVLTYNALV 578
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ LC+ A LL +MV KG+ PD T+ +L+
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 32/415 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ L+K C NR + F+ + MK +GV P N+L+ K + A L ++M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ + TF+I+I CKE L A + + G P++VT ++ CS GRV
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A IL M+R+ P+ TY LIS C+ G L+ A +F
Sbjct: 274 AADAIL-------------------TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF 314
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+M G+ + V Y+TLI G C+ G +D M K+G +S YNS+++ L+
Sbjct: 315 EEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM--LKKGISPTMSTYNSLIHALF 372
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
E + DEA +K++++ + P A+ ++ I G+C N + A D+M+ G P
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y L+H ++ R++EA +L K++T G LP A FN ++ G C NV A +L
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFEL---- 488
Query: 438 MRGIGRGSLPGSG-HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ + R +P ++ +++ C +G + A L +M +GI PD++++N+L+
Sbjct: 489 LKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 65/404 (16%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSIL 153
TN + + F+ L + R +S++++ LI S C + A
Sbjct: 129 TNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEA-----------------F 171
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
C Y +E G +P + T +L L +
Sbjct: 172 ECFYTMKEK--------------GVLPTIETCNSLLSLFL-------------------K 198
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
L + + EM R +V T+NI+I+ C+ G L A D M+ G+ N VT
Sbjct: 199 LNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT 258
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALE 329
Y+T++ G CS GR++ IL M+ + +I P Y S++ G+ ++ + +EA +
Sbjct: 259 YNTIVHGYCSSGRVEAADAILTTMK------RQKIEPDSFTYGSLISGMCKQGRLEEASK 312
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M + L P AV + I GFC GN++ A D+M+++G P + Y+ LIHA
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
E+R EA ++KE+ G P A T+N +++G CR N A L+ ++M + G P
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF-LLHDEM--LASGIKP 429
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ L+ L +K + A L ++ +G+LPD + +N+L+
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALI 473
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 7/225 (3%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+ +D LI+ C R D+ + M++ +G I NS+L + N+ + A
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKE--KGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 332 KQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M +L ++ + I+ C +G ++ AK M G PN+V Y+ ++H YC
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
RV A ++ M P + T+ +++SG+C+QG + A K+ EE + +G P +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEE---MVQKGLRPSA 326
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
Y+ LI C KG AS +M+ KGI P T+NSL+ L
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 23/249 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R D + + P+ K + S+L VL K++
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KK+ + GV D + L+ G C + V F+LL M V P+ V +NT++ C+
Sbjct: 454 FKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV AR L +M+ +P+ ++F+ LI Y + ++ +A + + GF P V+T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC ++G L + LKEM KG P+ TY LI
Sbjct: 574 YNALVQGLCK--------------NQEGDLAE-----ELLKEMVSKGMTPDDTTYFTLIE 614
Query: 245 SYCETGVLD 253
+ + D
Sbjct: 615 GIAKVNIPD 623
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 148/512 (28%), Positives = 231/512 (45%), Gaps = 61/512 (11%)
Query: 42 MTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
M P LK N +L +L D ID+AR Y M+ G++ TY ++ C +V +
Sbjct: 150 MLPDLKNCNRVLRLLRDRDSSIDVAREVY-NVMVECGIRPTVVTYNTMLDSFCKQGKVQE 208
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILIC 155
+LL M+ G PN V YN L++ L +G++ +A+ L+ +M E + T+ LI
Sbjct: 209 ALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIR 268
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
YC++ L A L E+ S G VP +VT ++ LC GRV DA ++L+ +
Sbjct: 269 GYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP 328
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
RLG + E+ +G +P+V TYN LI C G LD A+ +
Sbjct: 329 DLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLK 388
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGR-----------IDDGLKI------------LQL 296
++M G + T+ L+RG C G ++ GL+ L+L
Sbjct: 389 DEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 448
Query: 297 MEDSK----------EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ SK G + YN + GL++ EA E +K+M L P V
Sbjct: 449 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 508
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I + G++ A+ F +M+ +G P+VV Y LIH+Y R++ A EM
Sbjct: 509 TSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 568
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T+N +++GLC+ + A K E +G P Y+ LI C G
Sbjct: 569 KGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQ---AKGISPNKYTYTILINENCNLGH 625
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+Q A L M+ + I PD T ++LL L++
Sbjct: 626 WQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 186/404 (46%), Gaps = 62/404 (15%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD-----MEE--PNDVTFSILICAYCKE 160
+ G K + + Y ++ L +NG + A +M ME + + +L+ Y K+
Sbjct: 73 RQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKK 132
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELL----CSVGRVMDAVEILEESGEQG---- 212
L L++ K S G +PD+ +VL LL S+ + ++ E G +
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVT 192
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ GKV+ + L +M++ GCLPN TYN+L++ +G L+ A ++ +M
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ + TYD LIRG C G++D+ ++ + E G+ + YN+++YGL
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGE--EMLSRGAVPTLVTYNTIMYGL----- 305
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
C G V DA++ D M+ + +P++V Y+ LI
Sbjct: 306 ----------------------------CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLI 337
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ Y + + EA L E+ G +P T+NT++ GLCR G++ A++L +E I
Sbjct: 338 YGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDE---MIKH 394
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
G P ++ L++ C+ G A L +M+ +G+ PD +
Sbjct: 395 GPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAY 438
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 141/314 (44%), Gaps = 22/314 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G R I + + + PS+ +N+++D L + D+D+A
Sbjct: 328 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRL 387
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G D +T+ IL++G C + +L M +RG++P+ Y T I
Sbjct: 388 -KDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL 446
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G +A + +M P+ +T+++ I K NL A L++K G VPD V
Sbjct: 447 KLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV 506
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T T ++ G + A + E +G G++K EM
Sbjct: 507 TYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEM 566
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG PNV TYN LI+ C+ +D A F +M+ GIS N TY LI C+ G
Sbjct: 567 HEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHW 626
Query: 288 DDGLKILQLMEDSK 301
+ L++ + M D +
Sbjct: 627 QEALRLYKDMLDRE 640
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ +N++++ L K +D A F+ +M A G+ + YTY IL+ C + +
Sbjct: 573 PNVITYNALINGLCKVRKMDQAYKFF-TEMQAKGISPNKYTYTILINENCNLGHWQEALR 631
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL 138
L M R ++P+S ++ L+ L K+ K R L
Sbjct: 632 LYKDMLDREIQPDSCTHSALLKHLNKDYKSHVVRHL 667
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 236/503 (46%), Gaps = 30/503 (5%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
S+ V+R R+ + D R++ P ++ ++LDVL K + +
Sbjct: 164 SLVCAVLRSQADERVALNFFYWADRQWRYSHHPL--VYYTLLDVLSKTKLCQGARRVLRL 221
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G++ + +M ++ + ++L +M+ GV+PN I NT I+ L K K
Sbjct: 222 MTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCK 281
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ +A + M+ +P+ VT++ LI YC + +AL L+ S G PD V+
Sbjct: 282 LEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYT 341
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERK 230
V+ LC ++ ++E+ + L G FLKE E K
Sbjct: 342 VMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDK 401
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G + Y+ ++ S+C+ G +D A + DM + + VTY ++ G C GRID+
Sbjct: 402 GFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEA 461
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKI 348
K+LQ M K G K Y ++L GL + EA E + E+ + P A+ + +
Sbjct: 462 KKMLQQM--YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVM 519
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF +G + +A +M+E+G P V + LI + CQ ++V EA + ++E G
Sbjct: 520 HGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCA 579
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
F TV+ G C+ G++ AL ++ EDM + P + Y+ L AL +KG A
Sbjct: 580 INVVNFTTVIHGFCQIGDMEAALSVL-EDMYLSNKH--PDAVTYTALFDALGKKGRLDEA 636
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
+ L+V+M+ KG+ P +T+ S++
Sbjct: 637 AELIVKMLSKGLDPTPVTFRSVI 659
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 233/502 (46%), Gaps = 70/502 (13%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKM 72
F V+ RA + + ++ L+ + + P+L I N+ + VLVK L +A + ++M
Sbjct: 234 FGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVK-GCKLEKALRFLERM 292
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+G++ D TY L+KG C NR+ D +L+ + S+G P+ V Y T++ LCK K+
Sbjct: 293 QVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKI 352
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ + LM M + P+ VT++ LI K + +AL L+++ GF D V +
Sbjct: 353 EQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSA 412
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR+ +A + + +M + C P+V TY ++ +C
Sbjct: 413 IVHSFCQKGRMDEAKSL-------------------VIDMYSRSCNPDVVTYTAIVDGFC 453
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G +D A + M G N V+Y L+ GLC G+ + +++ + E+ +
Sbjct: 454 RLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEE-HWWTPNA 512
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
I+ Y V++G RE + EA + ++M EK FP V+ +L I C + V +AK+ +
Sbjct: 513 IT-YGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLE 571
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQ-----------------------------------EE 390
+ + +G NVV + +IH +CQ +
Sbjct: 572 ECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKG 631
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ EA+EL+ +M G P TF +V+ C+ G V L L++ R + R P
Sbjct: 632 RLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLD---RMVKRK--PFRT 686
Query: 451 HYSPLIKALCEKGGFQSASMLL 472
Y+ +I+ LC+ G + A LL
Sbjct: 687 IYNHVIEKLCDFGNLEEAEKLL 708
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 198/477 (41%), Gaps = 64/477 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDV-VKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
PPD+ + TV+ L + + I V +V N+ P +N+++ +L K D A
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392
Query: 66 AFYRKK----------------------------------MMASGVQGDDYTYAILMKGL 91
AF ++ M + D TY ++ G
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
C R+ + K+L M G KPN+V Y L++ LC +GK AR +++ EE PN
Sbjct: 453 CRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 512
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+T+ +++ + +E L A L + GF P V I +++ LC +V++A
Sbjct: 513 ITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAK----- 567
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
++L+E KGC NV + +I +C+ G +++AL V DM +
Sbjct: 568 --------------KYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNK 613
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ VTY L L GR+D+ +++ M +G + SV++ + + D+
Sbjct: 614 HPDAVTYTALFDALGKKGRLDEAAELIVKM--LSKGLDPTPVTFRSVIHRYCQWGRVDDM 671
Query: 328 LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L L +M K P + I C GN+E+A++ +++ + L+ +
Sbjct: 672 LNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCL 731
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
++ A ++ +M P V L GN+ A KL+ +R + RG
Sbjct: 732 KKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLM---LRFVERG 785
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 144/509 (28%), Positives = 231/509 (45%), Gaps = 30/509 (5%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLV-SRFNMTPSLKIFNSILDVLVKED-IDLA 64
+ P + ++ A M+ K + V ++ P + N +L +LV++ D A
Sbjct: 1072 AAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDA 1131
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R Y +M+ D+Y+ +L++GLCL RV +G KL+ G P+ V YN LI
Sbjct: 1132 RKLY-DEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLID 1190
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
C+ G +GR L+ +ME P VT+ LI K+ +L L + GF P
Sbjct: 1191 GYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSP 1250
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+V V++ LC A+ IL++ G G V+ FL
Sbjct: 1251 NVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFL 1310
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+E R+ PN +Y LI +C G L A D+ +M G + + VT+ LI GL
Sbjct: 1311 REAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVA 1370
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G++ + L + + M + + I YN ++ GL ++ A L++M + + P
Sbjct: 1371 GKVSEALIVREKMTERQVFPDVNI--YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEF 1428
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I GF N+ DA++ F+ M +G P++V + +I YCQ + EA M M
Sbjct: 1429 VYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNM 1488
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G +P T+ TV+SG +QGN+ AL+ + DM I R P YS LI C+
Sbjct: 1489 RKVGCIPDEFTYTTVISGYAKQGNLNGALRWL-CDM--IKRKCKPNVVTYSSLINGYCKT 1545
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A L M + + P+ +T+ L+
Sbjct: 1546 GDTDFAEGLFANMQAEALSPNVVTYTILI 1574
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 197/456 (43%), Gaps = 78/456 (17%)
Query: 9 PDESIFITVIRGL---GRAR----MINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
PD F T+I GL G R + + ++ ++ + TP + F +++V D+
Sbjct: 1285 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDL 1344
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ +MM G D T+ L+ GL + +V + + M R V P+ IYN
Sbjct: 1345 LV-------EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1397
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI LCK + A++++ +M E P++ ++ LI + + ENL +A + E G
Sbjct: 1398 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 1457
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
PD+V+ +++ C G + +A+ + + G + G + G
Sbjct: 1458 ICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1517
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R+L +M ++ C PNV TY+ LI+ YC+TG D A +F +M+ + +S N VTY LI
Sbjct: 1518 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILI--- 1574
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE-------NQQDEALEYL-KQ 333
G + K+L+ GLY E + D L YL
Sbjct: 1575 ---GSLFKKDKVLRA--------------------GLYFETMLLNHCSPNDVTLHYLVNG 1611
Query: 334 MEKLFPRAVDRSLKILGFCVDGNVEDAKRC----FDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ P ++ C + + K F +++ + G P Y+ +I + C+
Sbjct: 1612 LTSCTPCVIN------SICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRH 1665
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+REA + M GY+P TF ++L G C G
Sbjct: 1666 NMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 1701
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 6/248 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D+ D M + G + L+ G + K+ + + + + GS ++
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVRE-QYGSLPEVTHC 1115
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIE 369
N +L L + + D+A + +M A + S +L G C++ VE+ + +
Sbjct: 1116 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1175
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G +P+VV Y+ LI YC+ + L+ EM G+LP T+ ++++ L ++G++
Sbjct: 1176 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEK 1235
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
L E MR RG P Y+ +I ALC+ A ++L QM G PD +T+N+
Sbjct: 1236 IGSLFLE-MRK--RGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNT 1292
Query: 490 LLICLSQQ 497
L+ L +
Sbjct: 1293 LITGLCHE 1300
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 97/224 (43%), Gaps = 23/224 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PDE + TVI G + +N ++ D++ R P++ ++S+++ K D D A
Sbjct: 1495 PDEFTYTTVISGYAKQGNLNGALRWLCDMIKR-KCKPNVVTYSSLINGYCKTGDTDFAEG 1553
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
+ M A + + TY IL+ L ++V M PN V + L
Sbjct: 1554 LF-ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612
Query: 123 -------IHSLC--------KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL 167
I+S+C K+ + + L+ D+ +P + ++ +I + C+ L AL
Sbjct: 1613 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 1672
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+ G+VP+ +T +L CSVG+ ++ IL +Q
Sbjct: 1673 DFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILPNEFQQ 1716
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 222/473 (46%), Gaps = 38/473 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ +V+K +V TP LK + D + +D+ ++M G + ++Y I
Sbjct: 114 LGNVIKKGFIVDAIAFTPMLKGLCA--DKRTSDAMDIVL----RRMTQLGCIPNVFSYNI 167
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
L+KGLC NR + +LL +M G P+ V Y T+I+ K G + +A +M +
Sbjct: 168 LLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLD 227
Query: 145 ----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
PN VT+S +I A CK + + A+ +L G +P+ T ++ CS G+ +
Sbjct: 228 RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKE 287
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A+ FLK+M G P+V TYN L+ C+ G A +F+
Sbjct: 288 AIG-------------------FLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M G+ TY TL++G + G + + +L LM + G ++ ++ +
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRNGIHPNHYVFSILICAYAK 386
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ + D+A+ +M + L P V I C G VEDA R F+QMI+E P ++
Sbjct: 387 QGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIV 446
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ LIH+ C ++ +A EL+ EM G FN+++ C++G V + KL + +
Sbjct: 447 YNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMV 506
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R G P YS LI C G A+ LL MV G+ PD +T+N+L+
Sbjct: 507 R---IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 211/438 (48%), Gaps = 32/438 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + T+++G + ++ DL+ R + P+ +F+ ++ K+ +D A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D TY ++ LC + RV D + M + P +++YN+LIHSLC
Sbjct: 397 F-SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A+ L+ +M + + + F+ +I ++CKE ++ + L + G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G++ +A + L M G P+ TYN LI
Sbjct: 516 TYSTLIDGYCLAGKMDEAT-------------------KLLASMVSVGMKPDCVTYNTLI 556
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+ ++ AL +F +M+ G+S + +TY+ +++GL R ++ + +S G
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--G 614
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
++ +S YN +L+GL + N DEAL + + + R+ I+ G ++AK
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + G VP+V Y + ++ + E +L M +G + N+++ L
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734
Query: 422 CRQGNV---GTALKLVEE 436
++G++ GT L +++E
Sbjct: 735 LQRGDITRAGTYLFMIDE 752
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 172/382 (45%), Gaps = 26/382 (6%)
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+D PN T+ IL+ + C L L GF+ D + T +L+ LC+ R
Sbjct: 84 ADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTS 143
Query: 200 DAVEI-LEESGEQGRLGKV-------KGGC---------RFLKEMERKG--CLPNVDTYN 240
DA++I L + G + V KG C L+ M G C P+V +Y
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+I+ + + G LD A +++M GI N VTY ++I LC +D +++L M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM--V 261
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
K G YNS+++G Q EA+ +LK+M + + P V + + C +G
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A++ FD M + G P + Y L+ Y + + E L+ M +G P F+ ++
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+QG V A+ LV MR +G P + Y +I LC+ G + A QM+ +
Sbjct: 382 CAYAKQGKVDQAM-LVFSKMR--QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
+ P + +NSL+ L W
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKW 460
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 227/488 (46%), Gaps = 32/488 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +IRGL + I+D D + R + PS+ +N+++D K L A
Sbjct: 286 PNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSG-RLKDALG 344
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K +M +G DD+TY L+ GLC + + +LL+ +RG P + + +I+ C
Sbjct: 345 IKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYC 403
Query: 128 KNGKVG---RARSLMSDMEEPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K+ R +S+M + D+ + +LI K+ L A L + F+ G P+VV
Sbjct: 404 KAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVV 463
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C VG+V A+E+ K E +GC PN TY+ LI
Sbjct: 464 IYTSIIDAYCKVGKVGAALEVF-------------------KLTEHEGCRPNAWTYSSLI 504
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ L A+ + M+ DGI+ +TY TLI+G C D+ ++ ++ME + G
Sbjct: 505 YGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME--QNG 562
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
YN + L + + +EA +L + + + SL + GF GN E A
Sbjct: 563 LTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSL-VDGFSKAGNTEFAAAL 621
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
++M+ EG + Y L+ A C+++++ EA ++ +MT G + ++S + +
Sbjct: 622 IEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIK 681
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+G A + E I G P + Y+ I + C+ G + A L+ +M G+ PD
Sbjct: 682 EGKHDHAKSMFNE---MISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPD 738
Query: 484 YLTWNSLL 491
+T+N +
Sbjct: 739 VVTYNVFI 746
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 227/503 (45%), Gaps = 37/503 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
+R L R M + K + + + P +N+++ KE + +A ++R + S
Sbjct: 154 ALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRL-LRES 212
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G++ D YT L+ G C T + LL +M G + N Y LI LC+ V A
Sbjct: 213 GMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREA 272
Query: 136 RSL----MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L + D PN T+++LI CKE + +A VLL++ G VP V T +++
Sbjct: 273 LVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDG 332
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C GR+ DA+ G + L ME GC P+ TYN LI C G
Sbjct: 333 YCKSGRLKDAL-----------------GIKTL--MEGNGCNPDDWTYNSLIHGLC-GGK 372
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D A ++ N G S +T+ +I G C +IDD L++ +M SK K + Y
Sbjct: 373 PDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSK--CKLDLQAY 430
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
++ L ++++ EA + L ++ L P V + I +C G V A F
Sbjct: 431 GVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEH 490
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
EG PN Y LI+ Q++++ +A L+ +M G P T+ T++ G C++
Sbjct: 491 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 550
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L E + G P Y+ L ALC+ G + A LV+ KG++ +T+ S
Sbjct: 551 AFRLFEMMEQN---GLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTS 604
Query: 490 LLICLSQQ-TTWLLLLLLNEMVS 511
L+ S+ T L+ +MV+
Sbjct: 605 LVDGFSKAGNTEFAAALIEKMVN 627
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/524 (21%), Positives = 226/524 (43%), Gaps = 40/524 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G +A I+D ++ ++ L+ + ++ VL+K+
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ A+G+ + Y ++ C +VG ++ + + G +PN+ Y++LI+ L +
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQ 509
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ +A +L++ M+E P +T++ LI CK+ NA L E G PD
Sbjct: 510 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 569
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKGGCRFLKEMERKG 231
+ + LC GR +A L + G + G + +++M +G
Sbjct: 570 YNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEG 629
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C + TY++L+ + C+ L+ AL + + M + G+ N V Y +I + G+ D
Sbjct: 630 CKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAK 689
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
+ M S G K Y + + + +EA + +ME+ + P V ++ I
Sbjct: 690 SMFNEMISS--GHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFIN 747
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE----------------RVR 393
G G ++ A +MI+ PN Y L+ + + ++
Sbjct: 748 GCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLD 807
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+L++ M HG P A T++++++G C+ + A L++ +G+ P Y+
Sbjct: 808 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDH---MLGKDISPNEEIYT 864
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LIK C+ F+ A+ + M+ G P +++ L+ L +
Sbjct: 865 MLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDE 908
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 207/459 (45%), Gaps = 35/459 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ ++I + + ++ L P+ ++S++ L+ +D L +A
Sbjct: 460 PNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLI-QDQKLHKAMA 518
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G+ TY L++G C + + F+L +M+ G+ P+ YN L +LC
Sbjct: 519 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 578
Query: 128 KNGKVGRARS-LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+G+ A S L+ VT++ L+ + K N A L+EK + G D T +
Sbjct: 579 KSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYS 638
Query: 187 KVLELLCSVGRVMDAVEILEE---SGEQGRL-------------GKVKGGCRFLKEMERK 230
+L+ LC ++ +A+ IL++ G +G + GK EM
Sbjct: 639 VLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISS 698
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TY + ISSYC+ G ++ A + +M+ +G++ + VTY+ I G G +D
Sbjct: 699 GHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCA 758
Query: 291 LKILQLMEDS-------------KEGSKGRISPYNSV-LYGLYRENQQDEALEYLKQMEK 336
L+ M D+ K K ++ + V G++ + D + L++M K
Sbjct: 759 FSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVK 818
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P AV S I GFC +E+A D M+ + PN IY LI C + +
Sbjct: 819 HGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEK 878
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
A+ + M G+ P +++ +++GLC +G+ A L
Sbjct: 879 AASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKAL 917
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 12/257 (4%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN+ + S + + +++ + +G+ + VTY+T+I C G + + +L+
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
+S G + N++L G R +A L M + R + S IL G C
Sbjct: 211 ES--GMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRC 268
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V +A M+++G PN+ Y LI C+E R+ +A L+ EM G +P T+N
Sbjct: 269 VREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNA 328
Query: 417 VLSGLCRQGNVGTAL--KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
++ G C+ G + AL K + E G G P Y+ LI LC G A LL
Sbjct: 329 MIDGYCKSGRLKDALGIKTLME-----GNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNG 382
Query: 475 MVGKGILPDYLTWNSLL 491
+ +G P +T+ +++
Sbjct: 383 AIARGFSPTVITFTNII 399
>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
Length = 693
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 219/473 (46%), Gaps = 33/473 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAFYRKKM 72
F ++ RA + ++ L+ + P + I N ++VLV +D A F ++M
Sbjct: 132 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFA-ERM 190
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
GV+ D YTY L+KGLC RV D +++ VM G P+ + Y T++ LCK +V
Sbjct: 191 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 250
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R L+ M P+ VT+++LI K + AL L +S F D V +
Sbjct: 251 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 310
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR+ +A EI + EM KGC P+V TY+ ++ +C
Sbjct: 311 IVHSFCLNGRMAEAKEI-------------------VGEMISKGCQPDVVTYSTVVDGFC 351
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G LD A + M + N VT+ L+ GLC G+ + ++L E+ E
Sbjct: 352 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEE--EWWTPS 409
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y+ V++G RE + E+ + + QM + FP V+ +L I C DG +AK +
Sbjct: 410 DITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFME 469
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q +G NVV + +IH + ++ + A LM +M P T+ V+ L ++G
Sbjct: 470 QCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKG 529
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ A LVE + + RG LP Y +I CEKG + LL +M+ +
Sbjct: 530 RLKEATGLVE---KMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLAR 579
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 228/505 (45%), Gaps = 44/505 (8%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKI-------------FNSILDVLVKEDIDLARAFYR 69
R+R++ D + +L R + +P L+ ++L + D+ A F+R
Sbjct: 61 RSRLVRDTCRLLEL--RESWSPKLEAQLRHLLRVLSPPQVRAVLRAQARGDVRRAFEFFR 118
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ +A LM ++ ++LH+M+ G P+ I N ++ L
Sbjct: 119 WADRQWRYRHAP-EFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVA 177
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+V +A M EP+ T++ LI C +V+A+ ++ G PD ++
Sbjct: 178 GRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISY 237
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEME 228
V+ LC RV + +L+ L G FL+E E
Sbjct: 238 YTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESE 297
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K + Y+ ++ S+C G + A ++ +M G + VTY T++ G C G +D
Sbjct: 298 GKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELD 357
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSL 346
K+++ M K K + ++L GL + + EA E L + E+ + P + S+
Sbjct: 358 QARKMMKHM--YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSV 415
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ GF +G ++++ QM+++G P V + LIHA C++ + EA + M++ G
Sbjct: 416 VMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKG 475
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
F TV+ G RQG++ +AL L++ DM R P Y+ ++ AL +KG +
Sbjct: 476 CTINVVNFTTVIHGFSRQGDLESALSLMD-DMYLSNRH--PDVVTYTVVVDALGKKGRLK 532
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A+ L+ +M+ +G+LP +T+ +++
Sbjct: 533 EATGLVEKMLNRGLLPTPVTYRTVI 557
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 217/496 (43%), Gaps = 61/496 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +I+GL AR + D ++ ++ + P + +++ L KE ++ R
Sbjct: 197 PDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGL 256
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ +G+ D TY +L+ GL + + L + + + + V Y+ ++HS C
Sbjct: 257 LQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFC 316
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
NG++ A+ ++ +M +P+ VT+S ++ +C+ L A +++ + P+ V
Sbjct: 317 LNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTV 376
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +L LC VG+ +A E+L +S E+ R GK+K C + +M
Sbjct: 377 THTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQM 436
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+KG P N+LI + C+ G A D + G + N V + T+I G G +
Sbjct: 437 LQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDL 496
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ L LM+D +Y N+ P V ++
Sbjct: 497 ESA---LSLMDD------------------MYLSNRH--------------PDVVTYTVV 521
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G +++A ++M+ G +P V Y +IH YC++ + + L+++M
Sbjct: 522 VDALGKKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQ- 580
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+ S +N V+ LC G + A L+ + +R S+ + L+++ +G
Sbjct: 581 -EMKSAYNQVVEKLCAFGKLNEAYSLLYKILRT---ASVRDAQTCHILMESFLNRGLGLQ 636
Query: 468 ASMLLVQMVGKGILPD 483
A + +M + ++PD
Sbjct: 637 AYNVACRMFRRNLIPD 652
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 136/314 (43%), Gaps = 13/314 (4%)
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
RV+ ++ Q R G V+ F + +R+ + + L+ SY G L SA+
Sbjct: 91 RVLSPPQVRAVLRAQAR-GDVRRAFEFFRWADRQWRYRHAPEFAQLMLSYSRAGKLRSAM 149
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
V + M+ DG + + + + L GR+D L+ + M + G + + YN ++
Sbjct: 150 RVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAERMR--RVGVEPDVYTYNCLIK 207
Query: 317 GLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGF-CVDGNVEDAKRCFDQMIEEGGV- 373
GL + +A+E + M + P ++ F C + VE+ + +M + G+
Sbjct: 208 GLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLF 267
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ V Y+ LIH + EA E ++E G + ++ ++ C G + A ++
Sbjct: 268 PDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEI 327
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-- 491
V E I +G P YS ++ C G A ++ M P+ +T +LL
Sbjct: 328 VGE---MISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNG 384
Query: 492 ICLSQQTT--WLLL 503
+C +T+ W LL
Sbjct: 385 LCKVGKTSEAWELL 398
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 206/436 (47%), Gaps = 31/436 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T++ GL + ++ V + + P L + ++++ L K + DLA
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M ++ D Y+ ++ LC V D L M ++G++P+ Y++LI LC
Sbjct: 228 LNK-MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE L+ A L ++ P++V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C R+ +A +I M K CLP+V TYN LI
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIF-------------------TLMVSKDCLPDVVTYNTLI 387
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ + +++F DM G+ N VTY TLI G D+ + + M +G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM--VSDG 445
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ G C G VED
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G P+V+ Y+ +I +C++ EA L +M G LP + T+NT++
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 421 LCRQGNVGTALKLVEE 436
R G+ + +L++E
Sbjct: 565 HLRDGDKAASAELIKE 580
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 219/455 (48%), Gaps = 32/455 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ NS+L+ + +M+ G Q D T+ L+ GL N+ + L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ M +G +P+ V Y +I+ LCK G+ A +L++ ME E + V +S +I + CK
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
++ +AL L + + G PDV T + ++ LC+ GR DA
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA------------------ 294
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
R L +M + PNV T+N LI ++ + G L A +F++M I N VTY++LI
Sbjct: 295 -SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C R+D+ +I LM SK+ ++ YN+++ G + + + +E + M + L
Sbjct: 354 GFCMHDRLDEAQQIFTLMV-SKDCLPDVVT-YNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
V + I GF + ++A+ F QM+ +G PN++ Y+ L+ C+ ++ +A
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLI 456
+ + + P T+N + G+C+ G V L ++G+ P Y+ +I
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK----PDVIAYNTMI 527
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+KG + A L ++M G LPD T+N+L+
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 216/449 (48%), Gaps = 37/449 (8%)
Query: 50 NSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL-MKGLCLTNRVGDGFKLLHVMK 108
N++L + + E +DL + + S V+ AI MK L G+ ++L
Sbjct: 39 NALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL---- 94
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
GV N YN +I+ LC+ ++ A +++ M + P+ VT + L+ +C +
Sbjct: 95 --GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A+ L+++ G+ PD VT T ++ L + +AV ++E
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER----------------- 195
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M KGC P++ TY +I+ C+ G D AL++ N M+ I + V Y T+I LC
Sbjct: 196 --MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
+DD L + M++ +G + + Y+S++ L + +A L M K+ P V
Sbjct: 254 RHVDDALNLFTEMDN--KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I F +G + +A++ FD+MI+ PN+V Y+ LI+ +C +R+ EA ++ M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
LP T+NT+++G C+ V ++L + R RG + + Y+ LI +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR---RGLVGNTVTYTTLIHGFFQA 428
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+A M+ QMV G+ P+ +T+N+LL
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ T+I G +A ++ + + P++ +N++LD L K ++ A + + +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYL 476
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
S ++ D YTY I+ +G+C +V DG+ L + +GVKP+ + YNT+I CK G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +L M+E P+ T++ LI A+ ++ + + L+++ S F D T V
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 189 LELL 192
++L
Sbjct: 597 TDML 600
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 233/503 (46%), Gaps = 32/503 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I G R + + + D + + + P++ ++ I++ L + ++ A
Sbjct: 379 PDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAI 438
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ M+ +G++ + Y LM RV + +L M+ +G+ P+ YN+LI C
Sbjct: 439 LRE-MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 497
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ AR+ + +M E PN T+ I Y K + A + S G +P+V
Sbjct: 498 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 557
Query: 184 TITKVLELLCSVGRVMDAVE----ILEESGEQ------------GRLGKVKGGCRFLKEM 227
T ++E C G V +A IL Q R GK+ E+
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ KG LPN TYN LIS C+ G +D A + +M I GI+ + VTY+ LI GLC G I
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ + +E G Y +++ G + A + L++M + P A +
Sbjct: 678 ERAKNLFDDIEG--RGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 735
Query: 346 LKILGFCV-DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ IL FC + E A F +M+E+ G + V ++ LI YC+ +++EA+ L++EM
Sbjct: 736 V-ILNFCCKEEKFEKALDLFQEMLEK-GFASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
++P T+ +++ C+ G +G A +L E R +P + Y+ L+ G
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQE---RNVMPTAKTYTSLLHGYHNIGN 850
Query: 465 FQSASMLLVQMVGKGILPDYLTW 487
S L +MV KGI PD +T+
Sbjct: 851 MSEVSALFEEMVAKGIEPDKMTY 873
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 235/492 (47%), Gaps = 34/492 (6%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDY 82
+AR++++ ++ + + P L ++ +++ E +M+ G++ +
Sbjct: 253 KARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G + F++ M + G++ N +I+NTL++ +CK GK+ +A +M +M
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
EP+ T+S+LI +C+ +N+ A LL++ P V+T + ++ LC
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC----- 427
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
R G ++G L+EM G PN Y L++++ + G ++ + +
Sbjct: 428 --------------RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMI 473
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
M+ GI + Y++LI G C R+++ LME + + Y + + G
Sbjct: 474 LERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY--LMEMLERRLRPNAHTYGAFIDGY 531
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ + + A Y +M + P + I G C +GNV +A F ++ + +V
Sbjct: 532 SKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDV 591
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y LIH + ++ EA + E+ G LP A T+N+++SG C+QGNV A +L+EE
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Query: 437 D-MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
++GI P Y+ LI LC+ G + A L + G+G+ P+ +T+ +++ C
Sbjct: 652 MCIKGIN----PDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707
Query: 494 LSQQTTWLLLLL 505
S+ T LL
Sbjct: 708 KSKNPTAAFQLL 719
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 132/526 (25%), Positives = 226/526 (42%), Gaps = 77/526 (14%)
Query: 30 VVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY--RKKMMASGVQGDDYTYAIL 87
+++++D+ + N I + IL V + L FY + KM S Q D + L
Sbjct: 51 LMESSDIPKKLNTDI---IRSVILQNQVGDPKRLLNFFYWSQHKMGTSTAQQDLDVLSAL 107
Query: 88 MKGLCLTNRVGDGFKLLHVM------------------KSRGVKPNSVIYNTLIHSLCKN 129
LC +N G L+ + +S PNSVI++ L+ S K
Sbjct: 108 AVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKM 167
Query: 130 GKVGRARSLMSDMEEPNDVTF--SILICAYCKEENLV-NALVLLEKSF----SFGFVPDV 182
G + A ++ P + F S+L C + L N + L K F + +PDV
Sbjct: 168 GFLVEAVNVFLG---PKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDV 224
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T ++ C VG V DA +L E GE+ RL + + M KG +P++ TY+IL
Sbjct: 225 YTYTNMISAHCKVGNVKDAKRVLLEMGEKARL--LDEAIELKRSMVDKGLVPDLYTYDIL 282
Query: 243 ISSYC-----------------------------------ETGVLDSALDVFNDMKIDGI 267
I+ +C G ++ A + ++M GI
Sbjct: 283 INGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGI 342
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N + ++TL+ G+C G+++ L+I+Q M + +G + Y+ ++ G R A
Sbjct: 343 EANLIIWNTLLNGVCKAGKMEKALEIMQEMME--KGVEPDSQTYSLLIEGHCRGQNMARA 400
Query: 328 LEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E L +M+ KL P + S+ I G C GN++ +M+ G PN V+Y L+ A
Sbjct: 401 FELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+ +E RV E+ +++ M G LP +N+++ G C+ + A + M + R
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL---MEMLERRL 517
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + Y I + G + A +M+ G+LP+ + +L+
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 563
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 187/374 (50%), Gaps = 12/374 (3%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++MM+ G D TY+ ++ LC ++V F+L MK G+ P+ +Y TLI S CK
Sbjct: 211 REMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKA 270
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR+ +ME PN VT++ LI AY K + A + E S G P++VT
Sbjct: 271 GFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTY 330
Query: 186 TKVLELLCSVGRVMDAVEILE-ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ LC G++ A +I + E + V R + + PNV TY L+
Sbjct: 331 TALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE---PNVFTYGALVD 387
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ + A D+ M ++G N V YD LI G C G++D+ ++ M + G
Sbjct: 388 GLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLEC--GY 445
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+S++ L+++ + D AL+ L +M P V + I G C G ++A +
Sbjct: 446 DPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 505
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
M E+G PNVV Y +I + + RV + EL+++M+ G P T+ +++ C
Sbjct: 506 LMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCC 565
Query: 423 RQGNVGTALKLVEE 436
G + A KL+EE
Sbjct: 566 STGLLDEAHKLLEE 579
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 233/540 (43%), Gaps = 86/540 (15%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+A L+ + P ++ ++ L + + + +M AS + TY IL+ G
Sbjct: 28 EALSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGC 87
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
++G ++L +M + G P+ I+N+L+H+ C++G A L+ M + P
Sbjct: 88 LNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGY 147
Query: 148 VTFSILICAYCK-EENLVNALVLLEKSF-------------------------------- 174
V ++ILI C EE + L L EK++
Sbjct: 148 VVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAY 207
Query: 175 -------SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------------- 212
S GF+PD T +KV+ LC+ +V A ++ +E G
Sbjct: 208 NVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSF 267
Query: 213 -RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ G ++ + EMER GC PNV TY LI +Y ++ + A +V+ M G + N
Sbjct: 268 CKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNI 327
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSK---------------EGSKGRISPYNSVLY 316
VTY LI GLC G+I+ +I ++M+ ++ + Y +++
Sbjct: 328 VTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVD 387
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL + Q EA + LK M E P V I G C G +++A+ F M+E G P
Sbjct: 388 GLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDP 447
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
NV Y LI +++R+ A +++ +M + P + ++ GLC+ G A KL+
Sbjct: 448 NVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 507
Query: 435 ---EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
EE +G P Y+ +I + G + LL QM KG P+++T+ L+
Sbjct: 508 VMMEE------KGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 192/448 (42%), Gaps = 55/448 (12%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G + D++T LC + G + L +++ P++V+Y +I LC+
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLC---KSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASL 57
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A ++ M PN +T+ IL+C +E L +L + G P
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C R G + LK+M + GC P YNILI C
Sbjct: 118 LVHAYC-------------------RSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGIC 158
Query: 248 ET-----GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ VLD A + +M G+ N V R LC G+ + +++ M
Sbjct: 159 SSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMM---- 214
Query: 303 GSKGRI---SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
SKG I S Y+ V+ L ++ ++A + ++M++ + P + I FC G +
Sbjct: 215 -SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFI 273
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A+ FD+M +G PNVV Y LIHAY + +V +A+E+ + M G P T+ +
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTAL 333
Query: 418 LSGLCRQGNVGTALKL-------------VEEDMRGI-GRGSLPGSGHYSPLIKALCEKG 463
+ GLC+ G + A ++ V+ R + G + P Y L+ LC+
Sbjct: 334 IDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAY 393
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A LL M +G P+++ +++L+
Sbjct: 394 QVKEARDLLKSMSVEGCEPNHVVYDALI 421
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 196/451 (43%), Gaps = 46/451 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + +I ++R ++ + +++ TP++ + +++D L K I+ A
Sbjct: 290 PNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQI 349
Query: 68 YRKKMMASGVQGDD-----------------YTYAILMKGLCLTNRVGDGFKLLHVMKSR 110
Y K M V+ D +TY L+ GLC +V + LL M
Sbjct: 350 Y-KIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVE 408
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA 166
G +PN V+Y+ LI CK GK+ A+ + + M E PN T+S LI K++ L A
Sbjct: 409 GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLA 468
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L +L K P+VV T++++ LC VG+ +A + +
Sbjct: 469 LKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY-------------------KLMVM 509
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME KGC PNV TY +I + ++G ++ L++ M G + NFVTY LI CS G
Sbjct: 510 MEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGL 569
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+D+ K+L+ M+ + ++ Y V+ G RE L + P A +
Sbjct: 570 LDEAHKLLEEMKQTYWPR--HVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRV 627
Query: 347 KILGFCVDGNVEDAKRCFDQM--IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
I F G +E A +++ N I+ LI + +A EL +M
Sbjct: 628 LIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMIS 687
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
G +P S ++ GL R AL+L++
Sbjct: 688 RGSIPELSILVHLIKGLLRVNRWEEALQLLD 718
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 226/494 (45%), Gaps = 29/494 (5%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD +I R + + + P FN+++ L E + A
Sbjct: 182 PPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEG-KIGEAL 240
Query: 68 YR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ K + G Q D TY LM GLC +LL M + +PN + YNT+I SL
Sbjct: 241 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 300
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ +V A +L S+M P+ T++ LI A C + LL + + +P+V
Sbjct: 301 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 360
Query: 183 VTITKVLELLCSVGRVM---DAVEILEESGEQGRL----GKVKGGC---------RFLKE 226
V + V++ LC G + D V+++ + G + + + G C +
Sbjct: 361 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 420
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M KGC+PNV +YNILI+ YC+ +D A+ + M + G+ + VTY+TLI GLC GR
Sbjct: 421 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 480
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
+ + + M S G + Y +L L + + EA+ LK +E L +
Sbjct: 481 LQHAIALFHEMVAS--GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 538
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ I G C G +E A+ F + +G P+V Y+ +IH C+ + EA++L ++M
Sbjct: 539 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 598
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G +NT++ G R A +L++E + G + +++ L + G
Sbjct: 599 NGCSRDGCIYNTIIRGFLRSNETFGATQLLQE---MLAEGFSADVSTTTLIVEMLSDDGL 655
Query: 465 FQSASMLLVQMVGK 478
QS L ++ VG+
Sbjct: 656 DQSFERLRLRGVGE 669
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 209/464 (45%), Gaps = 57/464 (12%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
++D + + + + + PS F +L + K +M + G+ D YT I
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN 146
L+ C R+G F +L + G +P++ +NTLI LC GK+G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE------------ 238
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
AL L +K+ GF PDVVT ++ LC VG A+
Sbjct: 239 -------------------ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI---- 275
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
R L+ M +K C PNV YN +I S C+ + A ++F++M G
Sbjct: 276 ---------------RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG 320
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
IS + TY++LI LC+ +L M +SK + +++V+ L +E
Sbjct: 321 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK--IMPNVVVFSTVVDALCKEGMIAI 378
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A + + M K + P V + + G C+ +++A + FD M+ +G VPNV Y+ LI+
Sbjct: 379 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 438
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
YCQ +R+ +A L+++M+ G + T+NT++ GLC G + A+ L E + G
Sbjct: 439 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE---MVASG 495
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+P Y L+ LC+ A +LL + G + D L +N
Sbjct: 496 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 539
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 208/439 (47%), Gaps = 31/439 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
+ F +++R RA + + +K ++ ++PS+ FNS+L +L+K ++A+ Y
Sbjct: 148 EARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVY 207
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV D +T+ IL++G C+ V DGF++ + + G +P+ V YNTL+ LC+
Sbjct: 208 DEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCR 267
Query: 129 NGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
GKV A +++ M + PN VT++ LI YC + + AL + E+ + G +
Sbjct: 268 AGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANN 327
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T +++ LC + +ILE + G P+ T+N L
Sbjct: 328 ITYNTLIKGLCEARKFEKIKDILEGTAGDGTFS------------------PDTCTFNTL 369
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QLMED-- 299
+ +C G LD AL VF M I + TY L+R LC GG + +L +L+E
Sbjct: 370 MHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKI 429
Query: 300 --SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFPRAVDRSLKILGFCVDGN 356
S +G K ++ YN + L + +A + +Q M + I+G C +G
Sbjct: 430 LLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGT 489
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
E M+ + P+ Y+ LI+ ++ A + +++M + P +STF++
Sbjct: 490 FESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHS 549
Query: 417 VLSGLCRQGNVGTALKLVE 435
+L+ L QG + L++
Sbjct: 550 ILAKLLEQGRASESASLIQ 568
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 223/501 (44%), Gaps = 90/501 (17%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF-YRKKMM 73
TV++ LG R + ++ + T + + + S+L++L + ++ AR F + +
Sbjct: 81 TVLQTLGFLRDTSKALQFFNWAQEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR 140
Query: 74 ASG-VQGDDYTYAILMKGLCLTNRVG---DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ G V+ + + LM+ NR G + K+ +MKS GV P+ V +N+L+ L K
Sbjct: 141 SRGIVKLEARFFNSLMRNF---NRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKR 197
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ A+ + +M P+ TF+ILI +C + + + FG PDVVT
Sbjct: 198 GRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVT 257
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC--LPNVDTYNIL 242
+++ LC R GKV +K M +K PNV TY L
Sbjct: 258 YNTLVDGLC-------------------RAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTL 298
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I YC ++ AL VF +M G+ N +TY+TLI+GLC + + KI ++E +
Sbjct: 299 IRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFE---KIKDILEGT-- 353
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
G SP +N++++ C GN++
Sbjct: 354 AGDGTFSPDTCTFNTLMHC---------------------------------HCHAGNLD 380
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM-------TGHGYLPIA 411
DA + F++M E P+ Y L+ + CQ +A +L+ ++ +G G P+
Sbjct: 381 DALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLV 440
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASM 470
+ +N + LC G A K + MR RG+ P S Y LI C++G F+S
Sbjct: 441 AAYNPIFKYLCETGKTKKAEKAFRQLMR---RGTQDPPS--YKTLIMGHCKEGTFESGYE 495
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
LLV M+ K PD+ T+ SL+
Sbjct: 496 LLVLMLRKDFXPDFETYESLI 516
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 150/334 (44%), Gaps = 24/334 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +IRG M++D + + +SRF P + +N+++D L + + A+
Sbjct: 218 PDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAG-KVTVAYN 276
Query: 69 RKKMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K M + + TY L++G C + + M ++G+K N++ YNTLI
Sbjct: 277 VVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKG 336
Query: 126 LCKNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC+ K + + ++ P+ TF+ L+ +C NL +AL + E+ P
Sbjct: 337 LCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQP 396
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T + ++ LC G A ++L++ E+ L + GC P V YN
Sbjct: 397 DSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL------------LSGDGCKPLVAAYN 444
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+ CETG A F + G + + +Y TLI G C G + G ++L LM
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLM--L 501
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
++ Y S++ GL ++ AL+ L++M
Sbjct: 502 RKDFXPDFETYESLINGLLHMDKPLLALQSLEKM 535
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 122/316 (38%), Gaps = 29/316 (9%)
Query: 9 PDESIFITVIRGLGRA-------RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--E 59
PD + + ++R L + +++ +++ L+S P + +N I L + +
Sbjct: 396 PDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGK 455
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+AF +++M G Q D +Y L+ G C G++LL +M + P+ Y
Sbjct: 456 TKKAEKAF--RQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETY 512
Query: 120 NTLIHSLCKNGK----VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+LI+ L K + ++ PN TF ++ ++ + L++
Sbjct: 513 ESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLD 572
Query: 176 FGFVPDVVTITKVLELLCSVG---RVMDAVEILEESGEQGRLG----------KVKGGCR 222
++ T + LL G + V +L G ++ KV G +
Sbjct: 573 KNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSK 632
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L ++D N +I CE L A ++ + G+ + L L
Sbjct: 633 LLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLK 692
Query: 283 SGGRIDDGLKILQLME 298
+GG++++ + + ME
Sbjct: 693 AGGKLEEAESVQKRME 708
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 210/427 (49%), Gaps = 30/427 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K+M G + D T+ L+ GLCL +V L+ M G +P+ V YN++++ +C++G
Sbjct: 148 KVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSG 207
Query: 131 KVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A ++ MEE N DV T+S +I + C++ + A+ L ++ + G VVT
Sbjct: 208 DTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 267
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ LC G+ D G LK+M + +PNV T+N+L+ +
Sbjct: 268 SLVRGLCKAGKWND-------------------GALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ G L A +++ +M GIS N +TY+TL+ G C R+ + +L LM +K
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK--CSP 366
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I + S++ G + D+ ++ + + K L AV S+ + GFC G ++ A+ F
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M+ G +P+V+ Y L+ C ++ +A E+ +++ + T++ G+C+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G V A L +G P Y+ +I LC+KG A++LL +M G P+
Sbjct: 487 GKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543
Query: 485 LTWNSLL 491
T+N+L+
Sbjct: 544 CTYNTLI 550
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 209/441 (47%), Gaps = 30/441 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + F T+I GL ++ V D + P + +NSI++ + + D LA
Sbjct: 156 PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDM 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M V+ D +TY+ ++ LC + L M+++G+K + V YN+L+ LC
Sbjct: 216 LRK-MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK L+ DM PN +TF++L+ + KE L A L ++ + G P+++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R+ +A +L+ M R C P++ T+ LI
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDL-------------------MVRNKCSPDIVTFTSLI 375
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D + VF ++ G+ N VTY L++G C G+I ++ Q M G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHG 433
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +L GL + ++ALE + Q K+ V + I G C G VEDA
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNV+ Y +I C++ + EA+ L+++M G P T+NT++
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 422 CRQGNVGTALKLVEEDMRGIG 442
R G++ + KL+EE M+ G
Sbjct: 554 LRDGDLTASAKLIEE-MKSCG 573
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 148/327 (45%), Gaps = 61/327 (18%)
Query: 16 TVIRGLGRARMIND-VVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMM 73
+++RGL +A ND + D+VSR + P++ FN +LDV VKE + A Y K+M+
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQEANELY-KEMI 325
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + TY LM G C+ NR+ + +L +M P+ V + +LI C +V
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+ ++ + N VT+SIL+ +C+ + A L ++ S G +PDV+T +L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 190 ELLCSVGRVMDAVEILEESGEQGRL------------GKVKGG----------------- 220
+ LC G++ A+EI E+ ++ ++ G KGG
Sbjct: 446 DGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 221 --------------CR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
C+ L++ME G PN TYN LI ++ G L ++
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ +MK G S + + +I L SG
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 108/231 (46%), Gaps = 16/231 (6%)
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DD + + Q M S+ + ++ + R Q + L++ KQ+E + ++
Sbjct: 70 DDAIALFQEMIRSRPLPG--LVDFSRFFSAIARTKQFNLVLDFCKQLE---LNGIAHNIY 124
Query: 348 ILGFCVDGNVEDAKRCFD-----QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
L ++ K CF ++++ G P+ ++ LI+ C E +V +A L+ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM 184
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCE 461
+G P T+N++++G+CR G+ A ++ + + R + YS +I +LC
Sbjct: 185 VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFT----YSTIIDSLCR 240
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL-LLLLNEMVS 511
G +A L +M KGI +T+NSL+ L + W LLL +MVS
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
VD +DA F +MI +P +V + A + ++ + K++ +G
Sbjct: 65 VDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 124
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T N +++ CR A ++ + M+ G P + ++ LI LC +G A +L+
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMK---LGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181
Query: 473 VQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
+MV G PD +T+NS++ IC S T+ +L
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDML 216
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 213/458 (46%), Gaps = 38/458 (8%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + N ++D + D+D A A M G++ TY ++KGLC R +
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALV-DSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKE 248
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+ M V P+ +N LI C+ G+V A +M+ P+ V+FS LI +
Sbjct: 249 VFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFS 308
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ + +A L + G VPD V T V+ C G + +A+ + +E
Sbjct: 309 RRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE----------- 357
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M GCLP+V TYN L++ C+ L A + N+M+ G++ + T+ TLI
Sbjct: 358 --------MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLI 409
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--K 336
G C G ++ L++ + ++ + + YNS++ G+ R+ +A E M +
Sbjct: 410 HGYCRQGNFENALQLFDTL--LRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + S+ I C G VEDA D+M+++G +PN+ Y+ +I YC+ V++
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYS 453
+ +++M P TFNT++ G ++ N+ A ++E++M P + Y+
Sbjct: 528 QFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM------VRPDAVTYN 581
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+I E+G Q A + M GI PD T+ SL+
Sbjct: 582 MIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLI 619
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 195/408 (47%), Gaps = 29/408 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +I G R + + VK + +TP + F+ ++ + + ++D A A+
Sbjct: 260 PDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAY 319
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ M G+ D Y +++ G C + + ++ M G P+ V YNTL++ LC
Sbjct: 320 LRE-MKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLC 378
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A L+++MEE P+ TF+ LI YC++ N NAL L + PDVV
Sbjct: 379 KQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVV 438
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ +C G + A E+ ++ M + LPN TY+ILI
Sbjct: 439 TYNSLIDGMCRKGDLAKANELWDD-------------------MHAREILPNHITYSILI 479
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S+CE G ++ A ++M G N TY+++I+G C G + G + LQ M ++
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR--QDN 537
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ +N++++G +E A MEK + P AV ++ I GF GN++DA
Sbjct: 538 VFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAG 597
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
R F M + G P+ Y LI+ + ++A +L EM G+ P
Sbjct: 598 RVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 199/430 (46%), Gaps = 38/430 (8%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++AS + +L++ + + + F+ ++ V + N L+ L + G
Sbjct: 78 LLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGW 137
Query: 132 VGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A R ++S E N T +I++ +YCK A ++ + PDVVT
Sbjct: 138 PHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNV 197
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ + R G V + M +G P + TYN ++ C
Sbjct: 198 LID-------------------ARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLC 238
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ D A +VF M ++ + +++ LI G C G + + +K + M+
Sbjct: 239 KHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRY------ 292
Query: 308 ISP---YNSVLYGLY-RENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
++P S L GL+ R + D A YL++M+ L P V ++ I GFC G++ +A
Sbjct: 293 VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R D+M+ G +P+VV Y+ L++ C++ R+ +A +L+ EM G P TF T++ G
Sbjct: 353 RVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGY 412
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
CRQGN AL+L + +R R P Y+ LI +C KG A+ L M + IL
Sbjct: 413 CRQGNFENALQLFDTLLRQRLR---PDVVTYNSLIDGMCRKGDLAKANELWDDMHAREIL 469
Query: 482 PDYLTWNSLL 491
P+++T++ L+
Sbjct: 470 PNHITYSILI 479
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 132/317 (41%), Gaps = 46/317 (14%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N T NI++ SYC+T D A V ++M+ + + VT++ LI G +D + ++
Sbjct: 156 NAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD 354
M + G K I YNSVL G C
Sbjct: 216 DSM--ANRGLKPGIVTYNSVLK---------------------------------GLCKH 240
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ AK F M + P+V ++ LI +C+ V+EA + KEM P +F
Sbjct: 241 RRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF 300
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+ ++ R+G + A + E M+G+G +P Y+ +I C G A + +
Sbjct: 301 SCLIGLFSRRGEMDHAGAYLRE-MKGLG--LVPDGVIYTMVIGGFCRAGSMSEALRVRDE 357
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVSFVMVVHELSAKEKRCKLRSLNH 533
MVG G LPD +T+N+LL L +Q L LLNEM E C +L H
Sbjct: 358 MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM-------EERGVTPDLCTFTTLIH 410
Query: 534 LAHGAGSVWLGLRIHDT 550
G+ L++ DT
Sbjct: 411 GYCRQGNFENALQLFDT 427
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCL 93
++V + N+ P+++ +NSI+ + ++ + F +KM V D T+ L+ G
Sbjct: 497 EMVKKGNL-PNIRTYNSIIKGYCRSGNVKKGQQFL-QKMRQDNVFPDLITFNTLIHGYIK 554
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV---GRARSLMSDME-EPNDVT 149
+ F + ++M+ V+P++V YN +I+ + G + GR M D EP+ T
Sbjct: 555 EENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYT 614
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+ LI + N A L ++ GF PD
Sbjct: 615 YMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/520 (26%), Positives = 231/520 (44%), Gaps = 80/520 (15%)
Query: 28 NDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQG----- 79
NDV A L +R N TP FN IL LVK + +KM G++
Sbjct: 64 NDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 123
Query: 80 ------------------------------DDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
D T+ L+KGLCL ++ F + +
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMS----DMEEPNDVTFSILICAYCKEENLVN 165
G + + Y TLIH LCK G+ A L+ ++ +PN V ++ +I + CK + +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A L + S G PDVVT + ++ C +G++ DA+++
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN------------------- 284
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M + P+V T+NIL++++C+ G + VF+ M GI NFVTY++L+ G C
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
++ I M ++ G I Y+ ++ G + + DEA+ K+M + + P V
Sbjct: 345 EVNKAKSIFNTM--AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S I G G + A + DQM + G P + Y+ ++ A C+ +V +A L+ ++
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH------YSPLIK 457
G P T++ ++ GLC+ G + ED R + G L GH Y+ +I+
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKL--------EDARKVFEGLLV-KGHNLNVDTYTIMIQ 513
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C +G F A LL +M G +PD T+ +++ L ++
Sbjct: 514 GFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKK 553
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 194/408 (47%), Gaps = 28/408 (6%)
Query: 63 LARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ +AF + K++A G D +Y L+ GLC LL + V+PN V+YNT
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNT 230
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I S+CK V A L S+M P+ VT+S LI +C L +A+ L K
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN 290
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
PDV T ++ C G++ + + + +QG + +V
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAK 350
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
M + G P++ +Y+I+I+ +C+ D A+++F +M I + VTY +LI GL
Sbjct: 351 SIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGL 410
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
GRI L+++ M D G I YNS+L L + +Q D+A+ L +++ + P
Sbjct: 411 SKSGRISYALQLVDQMHD--RGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQP 468
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
S+ I G C G +EDA++ F+ ++ +G NV Y +I +C E EA L+
Sbjct: 469 NMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALL 528
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+M +G +P A T+ ++ L ++ A KL+ E I RG P
Sbjct: 529 SKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLRE---MIARGVRP 573
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 188/434 (43%), Gaps = 60/434 (13%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
N V D L + + R P + +N ++ SL K+ L ME +PN V
Sbjct: 63 NNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 122
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ILI +C+ + A + K G+VPD +T T +++ LC G++ A ++
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G ++G+ + L+ ++ PNV YN +I S C+ +++
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A D+F++M GIS + VTY LI G C G+++D + + M
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM---------------- 286
Query: 314 VLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + P ++ + FC DG +++ K FD M+++G
Sbjct: 287 -------------------ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN V Y+ L+ YC + V +A + M G P +++ +++G C+ A+ L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-- 491
+E R + +P YS LI L + G A L+ QM +G+ P T+NS+L
Sbjct: 388 FKEMHR---KNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDA 444
Query: 492 ICLSQQTTWLLLLL 505
+C Q + LL
Sbjct: 445 LCKIHQVDKAIALL 458
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 183/354 (51%), Gaps = 38/354 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVL-----VKED 60
P+ ++ T+I + + +++N+ A DL S ++P + +++++ + +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNE---AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDA 279
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDL KM+ ++ D YT+ IL+ C ++ +G + +M +G+KPN V YN
Sbjct: 280 IDLFN-----KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYN 334
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+L+ C +V +A+S+ + M + P+ ++SI+I +CK + A+ L ++
Sbjct: 335 SLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK 394
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
+PDVVT + +++ L GR+ A++++++ ++G ++ +V
Sbjct: 395 NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKA 454
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
L +++ KG PN+ TY+ILI C++G L+ A VF + + G + N TY +I+G
Sbjct: 455 IALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQG 514
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
C G ++ L +L MED+ G Y ++ L+++++ D A + L++M
Sbjct: 515 FCVEGLFNEALALLSKMEDN--GCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/494 (27%), Positives = 232/494 (46%), Gaps = 40/494 (8%)
Query: 78 QGDDYTYAILMKGL---CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
Q D+ MK L C + + + L M +RG KP+ ++ LI K+ +
Sbjct: 71 QDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEK 130
Query: 135 ARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
A +M +E+ P+ ++ +I +CK + + +A +L++ GF PDVVT ++
Sbjct: 131 AIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGN 190
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C GR+ A+ R + ++ + C P V TY ILI + G
Sbjct: 191 FCGRGRLDLAL-------------------RVMDQLLKDNCKPTVITYTILIEATITQGG 231
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+D A+ + ++M G+ + TY+ ++ G+C G +D + L + SK G +S Y
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRI--SKNGCVAGVSTY 289
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N +L L E + + + + M + P + S I C DG +++AK M E
Sbjct: 290 NILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKE 349
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+ P+ YD LI A C+E +V A E + +M G+LP ++N++L+ LC+ GN
Sbjct: 350 KALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADE 409
Query: 430 ALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL + E+ +G G P +G Y+ L AL G A ++++M+ GI PD +T+N
Sbjct: 410 ALNIFEK----LGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYN 465
Query: 489 SLLICLSQ-----QTTWLLLLLLNEMVSFVMVVHELSAKEKRCKL-RSLNHLAHGAGSVW 542
SL+ CL + Q LL+ + V+ + CK+ R ++ + A V
Sbjct: 466 SLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVN 525
Query: 543 LGLRIHDTTHTFII 556
G ++TT+T +I
Sbjct: 526 EGCLPNETTYTLLI 539
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 210/478 (43%), Gaps = 37/478 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +I+G + I ++ +++ + P + +N+++ K D +D A
Sbjct: 110 PDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKV 168
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M G + D TY IL+ C R+ +++ + KP + Y LI +
Sbjct: 169 L-DRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATI 227
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G + A L+ +M P+ T+++++ CKE L A L + G V V
Sbjct: 228 TQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVS 287
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L ++L E GK + G + + +M KGC PN TY+ LI
Sbjct: 288 TYNILLR------------DLLNE-------GKWEYGEKLMSDMLVKGCEPNPITYSTLI 328
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++ C G +D A +V MK ++ + +YD LI LC G++D ++ L M G
Sbjct: 329 TALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISG--G 386
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
I YNS+L L + DEAL +++ ++ P A + G+ A
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM-TGHGYLPIASTFNTVLSG 420
+M+ G P+ + Y+ LI C++ V +A EL+ +M P ++NTVL G
Sbjct: 447 GMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLG 506
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA---SMLLVQM 475
LC+ + A++++ + G LP Y+ LI+ + G A + LLV M
Sbjct: 507 LCKVQRIIDAIEVLAA---MVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLVNM 561
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 139/474 (29%), Positives = 212/474 (44%), Gaps = 74/474 (15%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDI-DLAR 65
E FI + + G+A + KA DL R F + K FNS+L+V+++E + A
Sbjct: 125 EKCFIVIFKAYGKAHLPE---KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRAL 181
Query: 66 AFYRKKMMASGV-------------------------------------QGDDYTYAILM 88
FY + A GV + D YTY LM
Sbjct: 182 EFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLM 241
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
GLC +R+ + LL M+ G P+ V +N LI+ LCK G + RA L+ +M
Sbjct: 242 DGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCI 301
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN+VT++ LI C + L A+ LL++ S VP+VVT ++ L GR +D
Sbjct: 302 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALD---- 357
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
G C L ME +G N Y+ LIS + G A+ +F +M +
Sbjct: 358 --------------GAC-VLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV 402
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G N + Y +I GLC G+ DD +++L M + +G +S++ G +
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEM--TNKGCTPNAYTCSSLMKGFFEAGNS 460
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
A+E K M K V S+ I G C DG V++A + QM+ +G P+VV Y +
Sbjct: 461 HRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSM 520
Query: 383 IHAYCQEERVREASELMKEMTGHG--YLPIASTFNTVLSGLCRQGNVGTALKLV 434
I+ V +A +L EM G P T+N +L+ LC+Q ++ A+ L+
Sbjct: 521 INGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLL 574
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 25/297 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E + T+I GL + + D + P++ + +I++ LVK+ L A
Sbjct: 302 PNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACV 361
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G ++Y Y+ L+ GL + + L M +G + N+++Y+ +I LC+
Sbjct: 362 LALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCR 421
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK A ++S+M PN T S L+ + + N A+ + + F + V
Sbjct: 422 DGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVC 481
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LC G+V +A+ + +M KGC P+V Y+ +I+
Sbjct: 482 YSVLIHGLCKDGKVKEAMMV-------------------WTQMLGKGCKPDVVAYSSMIN 522
Query: 245 SYCETGVLDSALDVFNDMKIDGI--SWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
G+++ A+ ++N+M G + VTY+ L+ LC I + +L M D
Sbjct: 523 GLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLD 579
>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
Length = 794
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 230/526 (43%), Gaps = 80/526 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P S F ++ A D V+A + F P+ ++N+IL LV I LA A
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
Y +M+A+G + TY +LM GLC GD K+ M RG+ PN IY L+ SL
Sbjct: 194 LY-NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA---LVLLE-------- 171
C GK+ A L+ M++ P++VT++ + CK + A LV+L+
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312
Query: 172 KSFS---------------FGFV---------PDVVTITKVLELLCSVGRVMDAVEILEE 207
K +S FG+ PDVV T ++ GR+ DA+
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS---- 368
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
FL M++KG +P+ YN ++ C+ G L+ A + ++M + +
Sbjct: 369 ---------------FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ T +I GLC G +D+ ++I M + G + YN+++ G YRE + +EA
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEM--GEHGCDPTVMTYNALIDGFYREGRLEEA 471
Query: 328 LEYLKQME-----KLFPRAV--------DRSLKIL--GFCVDGNVEDAKRCFDQMIEEGG 372
+ME LF R SL+ L C G V A + +I+ G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
VP+VV Y+ LI+ C+ + A L KE+ G P T+ T++ GL R A+
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
L + ++ GS P Y+ ++++LC A L + + K
Sbjct: 592 LFQNILQS---GSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 208/468 (44%), Gaps = 50/468 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PDE + + GL + +N+ + ++ LK ++ ++D L + AR F
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQ-----ARRFD 329
Query: 68 ----YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
Y K M+ + D Y I+++G R+ D L VMK +G P++ YNT++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 124 HSLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC +G + RA +L S+M + N V T +I+IC CK + A+ + ++ G
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILE--ESGEQGRL----------------------- 214
P V+T +++ GR+ +A + E G L
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHD 509
Query: 215 ----GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G+V + L+ + G +P+V TYN LI+ C+ LD A+ +F ++++ GIS +
Sbjct: 510 MCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPD 569
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--- 327
+TY TLI GL R +D + + Q + S GS +S YNS++ L R + +A
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQS--GSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Query: 328 -LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L+YL + FP + DG+++D R ++ +E G + Y +
Sbjct: 628 WLDYLPKKYN-FPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGL 686
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
CQ R +A + + G + +++ LC N+ A+ ++
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 187/444 (42%), Gaps = 76/444 (17%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
F L ++ G+ +S + L+ + G+ A S M+E P ++ ++ A
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
++ AL L + + G P+ T +++ LC G DA+++ +E
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE--------- 232
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M +G +PNV Y +L+SS C G +D A+ + MK G + VTY+
Sbjct: 233 ----------MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282
Query: 277 LIRGLCSGGRIDDGLKILQLMEDS--KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ GLC GR+++ + L +++D G KG Y+ ++ GL++ + DE Y K M
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG----YSCLIDGLFQARRFDEGFGYYKTM 338
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE--- 389
+ P V ++ I G G +EDA D M ++G VP+ Y+ ++ C
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 390 ER--------------------------------VREASELMKEMTGHGYLPIASTFNTV 417
ER V EA ++ EM HG P T+N +
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNAL 458
Query: 418 LSGLCRQGNVGTALKLVEEDMRG----------IGRGSLPGSGHYSPLIKALCEKGGFQS 467
+ G R+G + A L + G +G + S L+ +C+ G
Sbjct: 459 IDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLK 518
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL ++ G++PD +T+N+L+
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLI 542
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
++ D D + G+ + + L+ S GR D ++ M++ + S+ YN
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQ--SRPTAFVYN 176
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L L AL +M P ++ + G C G DA + FD+M++
Sbjct: 177 TILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDR 236
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PNV IY L+ + C ++ EA +L+ M G LP T+N LSGLC+ G V A
Sbjct: 237 GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEA 296
Query: 431 LK---LVEEDMRGIG--------------RGSLPGSGHY--------SP-------LIKA 458
+ ++++ +G R G G+Y SP +I+
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRG 356
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E G + A L M KG +PD +N++L
Sbjct: 357 CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 364 FDQMIEE--GGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
FD + + G+P + + L+ A+ R +A + M P A +NT+L
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
L G + AL L R + G P Y+ L+ LC++G A + +M+ +GI
Sbjct: 182 LVDSGVILLALALYN---RMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGI 238
Query: 481 LPDYLTWNSLLICL 494
+P+ + LL L
Sbjct: 239 MPNVKIYTVLLSSL 252
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 204/460 (44%), Gaps = 68/460 (14%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P FN++ D K ++ + Y + M+ +G Y IL+ LC + +K
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVY-QGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEEN 162
LLH M+ + K ++ Y+T+I+ LCK +V AR L
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL------------------------ 102
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+EK + PD +T ++E LC R+ DA+ +EE
Sbjct: 103 -------IEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEE--------------- 139
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
M +G P+ YN ++S C+ ++ A +F M I+ N VTY+TLI GLC
Sbjct: 140 ----MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLC 195
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLYRENQQDEALEYLKQMEK--L 337
RI+ ++ + M KG + YN+++ G ++ A + +M +
Sbjct: 196 KAWRIETAYELFKEM-----AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNC 250
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V + I G G V+ A D M+++G PNV Y CLI +C+ RV EA +
Sbjct: 251 VPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHK 310
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLI 456
L+++M G P T+N +L+ LCR + A KL RG+ R P Y+ L+
Sbjct: 311 LLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKL----FRGMAQRRCHPTVVTYNTLL 366
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ALC A L +M+ KG PD +T+++L L++
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTR 406
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 174/361 (48%), Gaps = 30/361 (8%)
Query: 49 FNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+++I++ L K ++ AR K MA D TY +++ LC T R+ D + M
Sbjct: 83 YSTIINWLCKLNRVEEARELIEK--MARYAPPDALTYGPIVERLCKTKRIDDALATVEEM 140
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
+RG+KP++ IYN ++ LC+ KV AR L M + PN VT++ LI CK +
Sbjct: 141 ATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRI 200
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A L ++ G+VP V+ +++ C ++ A ++ ++
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK---------------- 244
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M R C+PNV TY LI ++G + +A +V + M G++ N TY LI G C
Sbjct: 245 ---MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
R+D+ K+L+ M +G + YN +L L R ++ ++A + + M + P
Sbjct: 302 VRRVDEAHKLLEQM--VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + + C ++ A R + +MI +G P+ + YD L + +V EA ELM++
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419
Query: 402 M 402
M
Sbjct: 420 M 420
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 178/403 (44%), Gaps = 41/403 (10%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVT----FSILICAYCKEEN 162
M R V P + +NT+ K G++ + + + M E + ILI CK N
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
A LL F + + ++ LC + RV +A E++E+
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP--------- 111
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
P+ TY ++ C+T +D AL +M GI + Y+ ++ GLC
Sbjct: 112 -----------PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLC 160
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EK 336
++++ + + M K RI+P YN+++ GL + + + A E K+M +
Sbjct: 161 QEEKVEEARLLFEKM------VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V + I GFC ++ AK FD+M+ VPNVV Y LI + +V+ A+
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA 274
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
E++ M G P +T++ ++ G C+ V A KL+E+ + +G P Y+ L+
Sbjct: 275 EVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQ---MVTQGIAPTVVTYNILL 331
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
+LC + A L M + P +T+N+LL +C +Q
Sbjct: 332 NSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 374
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 155/324 (47%), Gaps = 22/324 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR 65
+PPD + ++ L + + I+D + + ++ + P I+N +L L +E+ ++ AR
Sbjct: 110 APPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEAR 169
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +KM+ + + TY L+ GLC R+ ++L M +G P V YNTLI
Sbjct: 170 LLF-EKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 228
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK + A+ + M PN VT++ LI K + A +L+ G P+
Sbjct: 229 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 288
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
V T + +++ C V RV +A ++LE+ QG R K++ + +
Sbjct: 289 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 348
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
M ++ C P V TYN L+ + C LD A ++ +M G + +TYDTL GL G
Sbjct: 349 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 408
Query: 286 RIDDGLKILQLMEDSKEGSKGRIS 309
++ + ++++ M+ +K GR S
Sbjct: 409 KVHEAQELMEKMKLTKRNPFGRSS 432
>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
Length = 794
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 230/526 (43%), Gaps = 80/526 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P S F ++ A D V+A + F P+ ++N+IL LV I LA A
Sbjct: 134 PASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
Y +M+A+G + TY +LM GLC GD K+ M RG+ PN IY L+ SL
Sbjct: 194 LY-NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA---LVLLE-------- 171
C GK+ A L+ M++ P++VT++ + CK + A LV+L+
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312
Query: 172 KSFS---------------FGFV---------PDVVTITKVLELLCSVGRVMDAVEILEE 207
K +S FG+ PDVV T ++ GR+ DA+
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS---- 368
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
FL M++KG +P+ YN ++ C+ G L+ A + ++M + +
Sbjct: 369 ---------------FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ T +I GLC G +D+ ++I M + G + YN+++ G YRE + +EA
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEM--GEHGCDPTVMTYNALIDGFYREGRLEEA 471
Query: 328 LEYLKQME-----KLFPRAV--------DRSLKIL--GFCVDGNVEDAKRCFDQMIEEGG 372
+ME LF R SL+ L C G V A + +I+ G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
VP+VV Y+ LI+ C+ + A L KE+ G P T+ T++ GL R A+
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
L + ++ GS P Y+ ++++LC A L + + K
Sbjct: 592 LFQNILQS---GSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 208/468 (44%), Gaps = 50/468 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PDE + + GL + +N+ + ++ LK ++ ++D L + AR F
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQ-----ARRFD 329
Query: 68 ----YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
Y K M+ + D Y I+++G R+ D L VMK +G P++ YNT++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 124 HSLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC +G + RA +L S+M + N V T +I+IC CK + A+ + ++ G
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILE--ESGEQGRL----------------------- 214
P V+T +++ GR+ +A + E G L
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHD 509
Query: 215 ----GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G+V + L+ + G +P+V TYN LI+ C+ LD A+ +F ++++ GIS +
Sbjct: 510 MCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPD 569
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--- 327
+TY TLI GL R +D + + Q + S GS +S YNS++ L R + +A
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQS--GSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Query: 328 -LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L+YL + FP + DG+++D R ++ +E G + Y +
Sbjct: 628 WLDYLPKKYN-FPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGL 686
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
CQ R +A + + G + +++ LC N+ A+ ++
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 187/444 (42%), Gaps = 76/444 (17%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
F L ++ G+ +S + L+ + G+ A S M+E P ++ ++ A
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
++ AL L + + G P+ T +++ LC G DA+++ +E
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE--------- 232
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M +G +PNV Y +L+SS C G +D A+ + MK G + VTY+
Sbjct: 233 ----------MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282
Query: 277 LIRGLCSGGRIDDGLKILQLMEDS--KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ GLC GR+++ + L +++D G KG Y+ ++ GL++ + DE Y K M
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG----YSCLIDGLFQARRFDEGFGYYKTM 338
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE--- 389
+ P V ++ I G G +EDA D M ++G VP+ Y+ ++ C
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 390 ER--------------------------------VREASELMKEMTGHGYLPIASTFNTV 417
ER V EA ++ EM HG P T+N +
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNAL 458
Query: 418 LSGLCRQGNVGTALKLVEEDMRG----------IGRGSLPGSGHYSPLIKALCEKGGFQS 467
+ G R+G + A L + G +G + S L+ +C+ G
Sbjct: 459 IDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLK 518
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL ++ G++PD +T+N+L+
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLI 542
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
++ D D + G+ + + L+ S GR D ++ M++ + S+ YN
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQ--SRPTAFVYN 176
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L L AL +M P ++ + G C G DA + FD+M++
Sbjct: 177 TILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDR 236
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PNV IY L+ + C ++ EA +L+ M G LP T+N LSGLC+ G V A
Sbjct: 237 GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEA 296
Query: 431 LK---LVEEDMRGIG--------------RGSLPGSGHY--------SP-------LIKA 458
+ ++++ +G R G G+Y SP +I+
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRG 356
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E G + A L M KG +PD +N++L
Sbjct: 357 CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 132/501 (26%), Positives = 242/501 (48%), Gaps = 45/501 (8%)
Query: 24 ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAFYRKKMMASGVQGDD 81
+RM++D + + N+ PS++ +NS+L L DI D+ + SG
Sbjct: 96 SRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVY-----NDIKDSGTPQSA 150
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
T +I++ GLC +R D L + P+ V +NT++ CK G A+S
Sbjct: 151 RTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCM 210
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M + P+ +++ILI ++ AL L G PD+VT V + +G
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270
Query: 198 VMDAVEILEES-GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ A EI+++ ++G ++G ++ R +++ G NV Y+
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYS 330
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+L+SS C+ G +D AL + +M+ + + + VTY LI GLC G++ +++
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY------ 384
Query: 301 KEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILGFCVD 354
KE RI P ++ +L GL + +A Y M L P ++ I G+
Sbjct: 385 KEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKL 444
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G+VE+A R + ++ ++ P++V ++ LI+ +C+ +V EA L++ + HG P A T+
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTY 504
Query: 415 NTVLSGLCRQGNVGTALK-LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
T+++ C +GN+ + L+E +++ I P Y+ +IK LC++ + + LL
Sbjct: 505 TTLMNAYCEEGNINKLHELLLEMNLKDIE----PTVVTYTVVIKGLCKQRKLEESVQLLE 560
Query: 474 QMVGKGILPDYLTWNSLLICL 494
M KG+ PD +T+N+++ C
Sbjct: 561 DMRAKGLAPDQITYNTIIQCF 581
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 252/535 (47%), Gaps = 72/535 (13%)
Query: 42 MTPSLKIFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
PS+ FN+I+ K + D+A++F+ M+ G+ D Y+Y IL+ GL + + +
Sbjct: 181 FAPSVVSFNTIMSRYCKLGLADVAKSFF-CMMLKYGILPDTYSYNILIHGLIVAGSMEEA 239
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPNDVTFSILIC 155
+L + M+ +G++P+ V Y + G + AR ++ M +P+ VT+++LIC
Sbjct: 240 LELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLIC 299
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
+C+ N+ AL L S GF +V+ + +L LC G+V +A+++L E
Sbjct: 300 GHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQP 359
Query: 213 -------------RLGKVKGGCRFLKEME-------------------RKGCL------- 233
+ GKV+ + KEM KG L
Sbjct: 360 DLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYF 419
Query: 234 ---------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
P+V YNI+I Y + G ++ A+ ++ ++ I+ + VT+++LI G C
Sbjct: 420 DSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKN 479
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
++ + ++L+ ++ G + Y +++ E ++ E L +M + + P V
Sbjct: 480 RKVVEARRLLESIK--LHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVV 537
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ I G C +E++ + + M +G P+ + Y+ +I +C+ + +R+A EL+ +M
Sbjct: 538 TYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDM 597
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALK-LVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
H P +T+N ++ GLCR G+V A + LV R I + Y+ +IKA C
Sbjct: 598 LIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVA----YTTMIKAHCV 653
Query: 462 KGGFQSASMLLVQMVGKGI---LPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVS 511
KG Q A + QMV KG + DY + L CL + + ++L++ VS
Sbjct: 654 KGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVS 708
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 190/432 (43%), Gaps = 62/432 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GL + + ++ + + P+ + IL L ++ + Y
Sbjct: 359 PDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMY 418
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ S ++ D Y I++ G V + +L ++ + + P+ V +N+LI+ CK
Sbjct: 419 FDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCK 478
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNAL--VLLEKSFSFGFVPDV 182
N KV AR L+ ++ EP+ VT++ L+ AYC+E N +N L +LLE + P V
Sbjct: 479 NRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGN-INKLHELLLEMNLK-DIEPTV 536
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T V++ LC ++ ++V++LE+ M KG P+ TYN +
Sbjct: 537 VTYTVVIKGLCKQRKLEESVQLLED-------------------MRAKGLAPDQITYNTI 577
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +C+ + A ++ +DM I + TY+ LI GLC G ++D ++L ++D
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQD--- 634
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
R V Y + I CV G+ + A +
Sbjct: 635 ----RNINLTKVAY----------------------------TTMIKAHCVKGDAQRAVK 662
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F QM+E+G ++ Y +I+ C+ + EA M G P F +L+
Sbjct: 663 VFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFH 722
Query: 423 RQGNVGTALKLV 434
R G+V + +L+
Sbjct: 723 RAGHVHSVFELL 734
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 149/345 (43%), Gaps = 57/345 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ +++GL M++D D + N+ P + ++N ++D VK D++ A
Sbjct: 394 PNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRL 453
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y K++ + T+ L+ G C +V + +LL +K G++P++V Y TL+++ C
Sbjct: 454 Y-KRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYC 512
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + + L+ +M EP VT++++I CK+ L ++ LLE + G PD +
Sbjct: 513 EEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQI 572
Query: 184 T-------------ITKVLELL----------------------CSVGRVMDAVEILEES 208
T + K ELL C G V DA +L
Sbjct: 573 TYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSL 632
Query: 209 GEQG-RLGKV------KGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++ L KV K C + +M KG ++ Y+ +I+ C+ ++
Sbjct: 633 QDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLI 692
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+ A F M DG+S + ++ ++ G + ++L +M
Sbjct: 693 NEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK----EDIDLA 64
PD+ + T+I+ +A+ + + D + N+ P+ +N ++D L + ED D
Sbjct: 569 PDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRV 628
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + Y ++K C+ K+ H M +G + + Y+ +I+
Sbjct: 629 LV----SLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVIN 684
Query: 125 SLCKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK + A+ ++SD P+ F +++ A+ + ++ + LL FG +
Sbjct: 685 RLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLH 744
Query: 181 D 181
D
Sbjct: 745 D 745
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 198/407 (48%), Gaps = 32/407 (7%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P L + +++ L K D DLA K M ++ Y ++ GLC + D
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNK-MEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 72
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
L M+++G++PN V Y++LI LC G+ A L+SDM E P+ TFS LI A+
Sbjct: 73 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
KE LV A L ++ P +VT + ++ C R+ +A ++ E
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF----------- 181
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M K C P+V TYN LI +C+ ++ ++VF +M G+ N VTY+ LI
Sbjct: 182 --------MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL---EYLKQME 335
+GL G D +I + M +G I YN++L GL + + ++A+ EYL Q
Sbjct: 234 QGLFQAGDCDMAQEIFKEM--VSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRS 290
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
K+ P ++ I G C G VED F + +G P+VV Y+ +I +C++ EA
Sbjct: 291 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 350
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
L KEM G LP + +NT++ R G+ + +L++E MR G
Sbjct: 351 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKE-MRSCG 396
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 203/406 (50%), Gaps = 27/406 (6%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
L+ M ++G +P+ V Y +++ LCK G A +L++ ME EP + ++ +I C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K +++ +AL L ++ + G P+VVT + ++ LC+ GR DA +L + E+
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ GK+ + EM ++ P++ TY+ LI+ +C LD A +F M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ VTY+TLI+G C R+++G+++ + M S+ G G YN ++ GL++
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYNILIQGLFQAG 240
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D A E K+M + + P + + + G C +G +E A F+ + P + Y+
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+I C+ +V + +L ++ G P +NT++SG CR+G+ A L +E
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
G+LP SG Y+ LI+A G ++++ L+ +M G D T
Sbjct: 361 ---GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 161/327 (49%), Gaps = 26/327 (7%)
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
+ L+++ + G PD+VT V+ LC G A +L + EQG+L
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLE----------- 48
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
P V YN +I C+ +D AL++F +M+ GI N VTY +LI LC+ GR
Sbjct: 49 -------PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 101
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
D ++L M + K + +++++ +E + EA + +M K + P V
Sbjct: 102 WSDASRLLSDMIERKINPD--VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 159
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S I GFC+ +++AK+ F+ M+ + P+VV Y+ LI +C+ +RV E E+ +EM+
Sbjct: 160 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 219
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G + T+N ++ GL + G+ A ++ +E + G P Y+ L+ LC+ G
Sbjct: 220 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE---MVSDGVPPNIMTYNTLLDGLCKNGK 276
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A ++ + + P T+N ++
Sbjct: 277 LEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYG 317
M G + VTY ++ GLC G D +L ME +G++ P YN+++ G
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME------QGKLEPGVLIYNTIIDG 60
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + D+AL K+ME + P V S I C G DA R MIE P+
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V + LI A+ +E ++ EA +L EM P T++++++G C + A ++ E
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
+ + P Y+ LIK C+ + + +M +G++ + +T+N L+ L
Sbjct: 181 ---FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237
Query: 496 Q 496
Q
Sbjct: 238 Q 238
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 23/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F +I + + + K D + + ++ PS+ ++S+++ D +D A+
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ D TY L+KG C RV +G ++ M RG+ N+V YN LI L
Sbjct: 179 F-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 237
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD PN +T++ L+ CK L A+V+ E P +
Sbjct: 238 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 297
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D ++ +G V G CR KEM
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LPN YN LI + G +++ ++ +M+ G + + T L+ + GR+
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRL 416
Query: 288 D 288
D
Sbjct: 417 D 417
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + T++ GL + + + + + R M P++
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-------------------- 297
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
TY I+++G+C +V DG+ L + +GVKP+ V YNT+I C
Sbjct: 298 ---------------TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 342
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A +L +M+E PN ++ LI A ++ + + L+++ S GF D
Sbjct: 343 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 402
Query: 184 TITKVLELL 192
TI V +L
Sbjct: 403 TIGLVTNML 411
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLI 456
L+ M G P T+ V++GLC++G+ A L+ + + +G L PG Y+ +I
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK----MEQGKLEPGVLIYNTII 58
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
LC+ A L +M KGI P+ +T++SL+ CL W
Sbjct: 59 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 102
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 195/403 (48%), Gaps = 27/403 (6%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G + Y L+ GLC + +LL + + V+PN V+YNT+I S+C
Sbjct: 148 FHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC 207
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V A L S+M P+ VT+S LI +C L +A+ L K S PDV
Sbjct: 208 KVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVY 267
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL----------------KEM 227
T + +++ C GRV +A +L +QG V C + M
Sbjct: 268 TFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM 327
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G NV +YNI+I+ +C+ +D A+++F +M I + VTY++LI GLC G+I
Sbjct: 328 AQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI 387
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
LK++ M D G YNS+L L + +Q D+A+ L +M E + P +
Sbjct: 388 SYALKLVDEMHD--RGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYT 445
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C G ++DA+ F+ ++ +G V Y +I +C + +A L+ +M +
Sbjct: 446 ILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDN 505
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
G +P A T+ ++ L + A KL+ E I RG L G
Sbjct: 506 GCIPNAKTYEIIILSLFEKDENDMAEKLLRE---MIARGLLFG 545
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 206/469 (43%), Gaps = 63/469 (13%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL 87
+ +V + + + N TP + F IL LVK + ++M +G+ D T+ IL
Sbjct: 38 HSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNIL 97
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---- 143
+ F + + +G +PN++ TLI LC G++ +A +
Sbjct: 98 INCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGF 157
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
N V + LI CK AL LL + P+VV +++ +C V V +A +
Sbjct: 158 HLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 217
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ EM KG P+V TY+ LIS +C G L+ A+ +FN M
Sbjct: 218 LYS-------------------EMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMI 258
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ I+ + T+ L+ G C GR+ + +L +M K+G K + Y S++ G
Sbjct: 259 SEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM--MKQGIKPDVVTYCSLMDG------ 310
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+C+ V AK F+ M + G NV Y+ +I
Sbjct: 311 ---------------------------YCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMI 343
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIG 442
+ +C+ ++V EA L KEM +P T+N+++ GLC+ G + ALKLV+E RG+
Sbjct: 344 NGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ Y+ ++ ALC+ A LL +M +GI PD T+ L+
Sbjct: 404 HDKIT----YNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILI 448
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 203/432 (46%), Gaps = 30/432 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ G + + T L+KGLCL ++ + + G N V Y TLI+ LCK G+
Sbjct: 117 ILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQ 176
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A L+ ++ +PN V ++ +I + CK + + A L + S G PDVVT +
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C +G++ DA+ + + M + P+V T++IL+ +C
Sbjct: 237 LISGFCILGKLNDAIGLFNK-------------------MISEEINPDVYTFSILVDGFC 277
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G + A +V M GI + VTY +L+ G C +++ I M ++ G
Sbjct: 278 KEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM--AQGGVTAN 335
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN ++ G + + DEA+ K+M + + P V + I G C G + A + D
Sbjct: 336 VQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVD 395
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M + G + + Y+ ++ A C+ +V +A L+ +M G P T+ ++ GLC+ G
Sbjct: 396 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGG 455
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ A + E+ + +G Y+ +I+ C+ F A LL +M G +P+
Sbjct: 456 RLKDAQNIFEDLLV---KGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAK 512
Query: 486 TWNSLLICLSQQ 497
T+ +++ L ++
Sbjct: 513 TYEIIILSLFEK 524
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 180/348 (51%), Gaps = 26/348 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARA 66
P+ ++ T+I + + +++N+ +++VS+ ++P + +++++ + ++ A
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYSALISGFCILGKLNDAIG 252
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ K M++ + D YT++IL+ G C RV + +L +M +G+KP+ V Y +L+
Sbjct: 253 LFNK-MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGY 311
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C +V +A+S+ + M + N +++I+I +CK + + A+ L ++ +PDV
Sbjct: 312 CLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDV 371
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
VT +++ LC G++ A+++++E ++G + +V L +
Sbjct: 372 VTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTK 431
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M+ +G P++ TY ILI C+ G L A ++F D+ + G + TY +I+G C
Sbjct: 432 MKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDL 491
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
D L +L MED+ G Y ++ L+ +++ D A + L++M
Sbjct: 492 FDKALALLSKMEDN--GCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 204/448 (45%), Gaps = 38/448 (8%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFK-LLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ +G + +D L+KGLC RVG+ LL M G P++V Y+ L+ C
Sbjct: 124 ILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNEN 183
Query: 131 KVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L+ M PN VT++ +I CK + A + ++ G P+
Sbjct: 184 RAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNND 243
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC-----------------RFLKE 226
T ++ S+G+ + V++LE+ +G +K C FL
Sbjct: 244 TYNCLIHGYLSIGKWKEVVQMLEKMSARG----LKPDCYTYGSLLNYLCALSEMHSFLDL 299
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G P+ +NI S+Y + G++D A+D+FN M+ G+S N V Y LI LC GR
Sbjct: 300 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 359
Query: 287 IDDG-LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+DD +K Q++ EG I +NS++YGL ++ + A E + +M + + P AV
Sbjct: 360 VDDAEVKFNQMI---NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVF 416
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I C G V + +R D M G P+ Y LI YC R EA ++ M
Sbjct: 417 FNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMV 476
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P T+NT+L G C + A L E +R +G PG Y+ ++ L +
Sbjct: 477 SIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLR---KGVTPGVVTYNTILHGLFQTK 533
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
F A L + M+ G D T+N +L
Sbjct: 534 RFSEAKELYLNMINSGTKCDIYTYNIIL 561
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 204/467 (43%), Gaps = 73/467 (15%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS---RGVKPNSVIYNTLIHSL 126
++M G D +Y+IL+KG C NR + +LL +M + R PN V Y T+I L
Sbjct: 158 QRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGL 217
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK RA + M +PN+ T++ LI Y + +LEK + G PD
Sbjct: 218 CKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDC 277
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T +L LC++ + FL M G P+ +NI
Sbjct: 278 YTYGSLLNYLCALSEMHS----------------------FLDLMVENGLSPDHHIFNIF 315
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSK 301
S+Y + G++D A+D+FN M+ G+S N V Y LI LC GR+DD +K Q++
Sbjct: 316 FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI---N 372
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-------EKLF---------------- 338
EG I +NS++YGL ++ + A E + +M +F
Sbjct: 373 EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVME 432
Query: 339 --------------PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
P A + I G+C+ G ++A++ FD M+ G P V Y+ L+H
Sbjct: 433 GRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLH 492
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
YC R+ +A L +EM G P T+NT+L GL + A +L + I G
Sbjct: 493 GYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELY---LNMINSG 549
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ Y+ ++ LC+ A + + KG+ + +T+ ++
Sbjct: 550 TKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMI 596
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/425 (28%), Positives = 192/425 (45%), Gaps = 37/425 (8%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V + TY+IL+ LC R+ F ++ G + N ++ N L+ LC +VG A
Sbjct: 94 VAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAM 153
Query: 137 S-LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLE---KSFSFGFVPDVVTITKV 188
L+ M E P+ V++SIL+ +C E AL LL P+VVT T V
Sbjct: 154 DVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTV 213
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ LC ++ D E + ++M G PN DTYN LI Y
Sbjct: 214 IDGLCK-AQLFDRAEGV------------------FQQMIDNGVKPNNDTYNCLIHGYLS 254
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G + + M G+ + TY +L+ LC+ + + L LM ++ I
Sbjct: 255 IGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHI 311
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
+N + D+A++ +M + L P V+ I C G V+DA+ F+Q
Sbjct: 312 --FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQ 369
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MI EG PN+V+++ L++ C ++ A EL+ EM G P A FNT++ LC G
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGR 429
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
V +L++ M + G P + Y+PLI C G A + MV G+ P +T
Sbjct: 430 VMEGRRLIDL-MEHV--GVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVT 486
Query: 487 WNSLL 491
+N+LL
Sbjct: 487 YNTLL 491
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 223/500 (44%), Gaps = 40/500 (8%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV----- 57
H PP+ + TVI GL +A++ + + + P+ +N ++ +
Sbjct: 199 HGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKW 258
Query: 58 KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
KE + + +KM A G++ D YTY L+ LC + + L +M G+ P+
Sbjct: 259 KEVVQML-----EKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENGLSPDHH 310
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
I+N + K G + +A + + M + PN V + LI A CK + +A V +
Sbjct: 311 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 370
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
+ G P++V ++ LC+V + A E++ E +QG +G+V
Sbjct: 371 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 430
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
G R + ME G P+ +Y LIS YC G D A VF+ M G+S VTY+TL
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTL 490
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ G CS RIDD + + M ++G + YN++L+GL++ + EA E M
Sbjct: 491 LHGYCSASRIDDAYCLFREM--LRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 548
Query: 338 FPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ + I+ G C V++A + F + +G N++ + +I A + R +A
Sbjct: 549 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 608
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+L + +G +P T+ V L +G++ L + G+ P S + L
Sbjct: 609 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKN---GTAPNSQMLNAL 665
Query: 456 IKALCEKGGFQSASMLLVQM 475
++ L +G A L ++
Sbjct: 666 VRRLLHRGDISRAGAYLSKL 685
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 132/303 (43%), Gaps = 39/303 (12%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN TY+ILI C G L + F + G N + + L++GLC G R+ + + +
Sbjct: 96 PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-----EKLFPRAVDRSLKI 348
L L + G Y+ +L G EN+ +EALE L+ M P V + I
Sbjct: 156 L-LQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVI 214
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C + A+ F QMI+ G PN Y+CLIH Y + +E +++++M+ G
Sbjct: 215 DGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK 274
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEED------------------------------- 437
P T+ ++L+ LC + + L L+ E+
Sbjct: 275 PDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 334
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
MR G P +Y LI ALC+ G A + QM+ +G+ P+ + +NSL+ L
Sbjct: 335 MR--QHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV 392
Query: 498 TTW 500
W
Sbjct: 393 DKW 395
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK----ED-IDLARAFYRKK 71
++ GL ++ +++ K + + ++ F ++ L+K ED +DL A
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAA----- 614
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
+ A+G+ + TY ++ + L + + L M+ G PNS + N L+ L G
Sbjct: 615 IPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGD 674
Query: 132 VGRARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEK 172
+ RA + +S ++E N T S+LI + +E +A L EK
Sbjct: 675 ISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSLPEK 719
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/495 (26%), Positives = 220/495 (44%), Gaps = 64/495 (12%)
Query: 54 DVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK 113
D+L ++L Y K M + D YTY L+ C +V +G +L M+ +G
Sbjct: 207 DLLKGNRVELFWKVY--KGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCI 264
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL 169
PN V Y+ +I LC+ G V A L M P++ ++ LI +C+++ +
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------R 213
L++ ++ G PD V T ++ + A ++ EE + +
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSY--------------------------- 246
+G ++ EM G P++ TYN LI Y
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444
Query: 247 --------CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
C G L A ++F +M G+ N V Y T+++GL GR ++ +KIL +M+
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
D +G + YN+V+ G + + +E YL +M + L P I G+C G
Sbjct: 505 D--QGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGE 562
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ A+R F +M++ G PN VI LI YC++ +A + M G LP T +
Sbjct: 563 MQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSV 622
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ GL + G + A+ + E + +G +P Y+ LI LC++G ++A L M
Sbjct: 623 LIHGLSKNGKLQEAMGVFSELL---DKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMC 679
Query: 477 GKGILPDYLTWNSLL 491
KGI P+ +T+N+L+
Sbjct: 680 KKGINPNIVTYNALI 694
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 238/537 (44%), Gaps = 29/537 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ T+++GL + + +K ++ ++P + +N+++ K Y
Sbjct: 475 PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSY 534
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+A G++ + YTY + G C + + M G+ PN VI LI CK
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594
Query: 129 NGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G +A R ++ P+ T S+LI K L A+ + + G VPDV T
Sbjct: 595 DGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T ++ LC G + A E+ ++ ++G +LG++ +
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG N TY+ +I+ YC++ L A +F+ MK+ G+ + Y LI G C G +
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
L + M + S +N+++ G ++ + EA + ++ M + P V ++
Sbjct: 775 KALSLFLGMVEEGIAS---TPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTI 831
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I C GN+++A++ F +M + +PNV+ Y L+H Y + R E L EM G
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARG 891
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P ++ ++ ++GN ALKLV +DM + G Y+ LI ALC+
Sbjct: 892 IKPDDLAWSVMVDAHLKEGNWIKALKLV-DDM--LSEGVNVCKNLYTILIDALCKHNNLS 948
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVSFVMVVHELSAK 522
+L ++ +G T +L+ C + T L +L MV + + E S +
Sbjct: 949 EVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRSFLNLLEFSVR 1005
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/556 (24%), Positives = 230/556 (41%), Gaps = 97/556 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + VI GL RA +++ ++ ++ + P I+ +++D ++
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G++ D Y L+ G + +G F++ M +R +K N+ Y LIH LCK
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCK 384
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL--------------------- 163
G + +A L S+M +P+ T++ LI Y K +N+
Sbjct: 385 IGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYM 444
Query: 164 ----VNALV----------LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
VN L L ++ S+G P++V T +++ L GR +A++IL
Sbjct: 445 CGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+QG + GK++ G +L EM KG PNV TY I YC G +
Sbjct: 505 DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQ 564
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+A F +M GI+ N V LI G C G + M D
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLD-------------- 610
Query: 314 VLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+ + P S+ I G +G +++A F +++++G V
Sbjct: 611 ---------------------QGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLV 649
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+V Y LI C+E ++ A EL +M G P T+N +++GLC+ G + A +L
Sbjct: 650 PDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAREL 709
Query: 434 VEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL- 491
+ +G+ R S+ YS +I C+ A L M G+ PD + +L+
Sbjct: 710 FDGIPEKGLARNSVT----YSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALID 765
Query: 492 -ICLSQQTTWLLLLLL 506
C + T L L L
Sbjct: 766 GCCKAGNTEKALSLFL 781
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 153/321 (47%), Gaps = 32/321 (9%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
VPDV T T ++ C R+GKV+ G L +ME KGC+PN+
Sbjct: 227 AIVPDVYTYTNLINAYC-------------------RVGKVEEGKHVLFDMEEKGCIPNL 267
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY+++I+ C G +D AL++ M G+ + Y TLI G C R +G +L
Sbjct: 268 VTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDE 327
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL-----KILGF 351
M G K Y +++ G +++ A + E++F R + + I G
Sbjct: 328 MYTM--GLKPDHVAYTALINGFVKQSDIGGAFQV---KEEMFARKIKLNTFTYYALIHGL 382
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G++E A+ F +M G P++ Y+CLI Y + + + +A EL+ E+ A
Sbjct: 383 CKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANA 442
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+++GLC G++ A +L +E I G P Y+ ++K L ++G F+ A +
Sbjct: 443 YMCGAIVNGLCHCGDLTRANELFQE---MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKI 499
Query: 472 LVQMVGKGILPDYLTWNSLLI 492
L M +G+ PD +N+++I
Sbjct: 500 LGVMKDQGLSPDVFCYNTVII 520
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 18/322 (5%)
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEE--SGEQGRLGKVKGGCRFLKEMERKGCLPN 235
F ++ T + + +LC+ G +A +LE + + + KE+ +
Sbjct: 103 FSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSSS 162
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V + ILI Y + G L+ A+ VF K + ++L + L G R++ K+ +
Sbjct: 163 VVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYK 222
Query: 296 LMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
G G I P Y +++ R + +E L ME+ P V S+ I
Sbjct: 223 -------GMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIA 275
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C G+V++A M +G +P+ IY LI +C+++R E ++ EM G P
Sbjct: 276 GLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKP 335
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
+ +++G +Q ++G A + V+E+M R + Y LI LC+ G + A
Sbjct: 336 DHVAYTALINGFVKQSDIGGAFQ-VKEEM--FARKIKLNTFTYYALIHGLCKIGDLEKAE 392
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L +M GI PD T+N L+
Sbjct: 393 DLFSEMTMMGIKPDIQTYNCLI 414
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 205/419 (48%), Gaps = 28/419 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA-- 135
Q D + Y L+ G C NR+ D ++L M+S+ P++V YN +I SLC GK+ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 136 --RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
L+SD +P +T++ILI A E + AL L+++ S G PD+ T ++ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 194 SVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVD 237
G V A E++ +G GK + G + + +M + C PNV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+ILI++ C G ++ A+++ MK G++ + +YD LI C GR+D ++ L+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
+G I YN+VL L + + D+ALE ++ ++ P + + G
Sbjct: 395 --ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ A +M+ G P+ + Y+ +I C+E V EA EL+ +M + P T+N
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
VL G C+ + A+ ++E +G G P Y+ LI+ + G+++ +M L
Sbjct: 513 IVLLGFCKAHRIEDAINVLES---MVGNGCRPNETTYTVLIEGI-GFAGYRAEAMELAN 567
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 31/412 (7%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EPNDV 148
C + + LL M +G P+ ++ LI + +A +M +E +P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI +CK + +A +L++ S F PD VT ++ LCS G++ A+++L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL--- 216
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
++ C P V TY ILI + G +D AL + ++M G+
Sbjct: 217 ----------------NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK 260
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ TY+T+IRG+C G +D ++++ +E +G + + YN +L L + + +E
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLE--LKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ + +M EK P V S+ I C DG +E+A M E+G P+ YD LI A+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GS 445
C+E R+ A E ++ M G LP +NTVL+ LC+ G AL++ + +G G
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK----LGEVGC 434
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P S Y+ + AL G A ++++M+ GI PD +T+NS++ CL ++
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 199/418 (47%), Gaps = 28/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + +I G + I+D + D + + +P +N ++ L + +DLA
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++ Q TY IL++ L V + KL+ M SRG+KP+ YNT+I +C
Sbjct: 216 L-NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V RA ++ ++E EP+ ++++IL+ A + L+ K FS P+VV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + ++ LC G++ +A+ +L+ E+G R G++ FL+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GCLP++ YN ++++ C+ G D AL++F + G S N +Y+T+ L S G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG-- 452
Query: 288 DDGLKILQL-MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
D ++ L + +E G YNS++ L RE DEA E L M + P V
Sbjct: 453 -DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ +LGFC +EDA + M+ G PN Y LI EA EL ++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPR 340
C G + L +L+ M ++G + ++ G + +A+ ++ +EK P
Sbjct: 100 CRSGNYIESLHLLETM--VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 157
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ I GFC ++DA R D+M + P+ V Y+ +I + C ++ A +++
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ P T+ ++ +G V ALKL++E + RG P Y+ +I+ +C
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE---MLSRGLKPDMFTYNTIIRGMC 274
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++G A ++ + KG PD +++N LL L Q W
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
Length = 812
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 145/526 (27%), Positives = 230/526 (43%), Gaps = 80/526 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P S F ++ A D V+A + F P+ ++N+IL LV I LA A
Sbjct: 134 PASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVDSGVILLALA 193
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
Y +M+A+G + TY +LM GLC GD K+ M RG+ PN IY L+ SL
Sbjct: 194 LY-NRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA---LVLLE-------- 171
C GK+ A L+ M++ P++VT++ + CK + A LV+L+
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312
Query: 172 KSFS---------------FGFV---------PDVVTITKVLELLCSVGRVMDAVEILEE 207
K +S FG+ PDVV T ++ GR+ DA+
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALS---- 368
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
FL M++KG +P+ YN ++ C+ G L+ A + ++M + +
Sbjct: 369 ---------------FLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNL 413
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ T +I GLC G +D+ ++I M + G + YN+++ G YRE + +EA
Sbjct: 414 VLDSTTQTIMICGLCKRGLVDEAMQIFDEM--GEHGCDPTVMTYNALIDGFYREGRLEEA 471
Query: 328 LEYLKQME-----KLFPRAV--------DRSLKIL--GFCVDGNVEDAKRCFDQMIEEGG 372
+ME LF R SL+ L C G V A + +I+ G
Sbjct: 472 RMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGV 531
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
VP+VV Y+ LI+ C+ + A L KE+ G P T+ T++ GL R A+
Sbjct: 532 VPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
L + ++ GS P Y+ ++++LC A L + + K
Sbjct: 592 LFQNILQS---GSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK 634
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 208/468 (44%), Gaps = 50/468 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PDE + + GL + +N+ + ++ LK ++ ++D L + AR F
Sbjct: 275 PDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQ-----ARRFD 329
Query: 68 ----YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
Y K M+ + D Y I+++G R+ D L VMK +G P++ YNT++
Sbjct: 330 EGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
Query: 124 HSLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC +G + RA +L S+M + N V T +I+IC CK + A+ + ++ G
Sbjct: 390 KVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCD 449
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILE--ESGEQGRL----------------------- 214
P V+T +++ GR+ +A + E G L
Sbjct: 450 PTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHD 509
Query: 215 ----GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G+V + L+ + G +P+V TYN LI+ C+ LD A+ +F ++++ GIS +
Sbjct: 510 MCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPD 569
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--- 327
+TY TLI GL R +D + + Q + S GS +S YNS++ L R + +A
Sbjct: 570 EITYGTLIDGLLRAHRENDAMMLFQNILQS--GSSPSLSIYNSMMRSLCRMKKLSQAINL 627
Query: 328 -LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L+YL + FP + DG+++D R ++ +E G + Y +
Sbjct: 628 WLDYLPKKYN-FPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGL 686
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
CQ R +A + + G + +++ LC N+ A+ ++
Sbjct: 687 CQVRRTDDALRIFHTLQEFGIDITPACCALLINYLCWDRNLNAAVDIM 734
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 187/444 (42%), Gaps = 76/444 (17%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
F L ++ G+ +S + L+ + G+ A S M+E P ++ ++ A
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKA 181
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
++ AL L + + G P+ T +++ LC G DA+++ +E
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDE--------- 232
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M +G +PNV Y +L+SS C G +D A+ + MK G + VTY+
Sbjct: 233 ----------MLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNA 282
Query: 277 LIRGLCSGGRIDDGLKILQLMEDS--KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ GLC GR+++ + L +++D G KG Y+ ++ GL++ + DE Y K M
Sbjct: 283 FLSGLCKVGRVNEAFQRLVMLQDGGFALGLKG----YSCLIDGLFQARRFDEGFGYYKTM 338
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE--- 389
+ P V ++ I G G +EDA D M ++G VP+ Y+ ++ C
Sbjct: 339 LERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDL 398
Query: 390 ER--------------------------------VREASELMKEMTGHGYLPIASTFNTV 417
ER V EA ++ EM HG P T+N +
Sbjct: 399 ERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNAL 458
Query: 418 LSGLCRQGNVGTALKLVEEDMRG----------IGRGSLPGSGHYSPLIKALCEKGGFQS 467
+ G R+G + A L + G +G + S L+ +C+ G
Sbjct: 459 IDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLK 518
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL ++ G++PD +T+N+L+
Sbjct: 519 AYKLLRSIIDSGVVPDVVTYNTLI 542
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
++ D D + G+ + + L+ S GR D ++ M++ + S+ YN
Sbjct: 119 EAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQ--SRPTAFVYN 176
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L L AL +M P ++ + G C G DA + FD+M++
Sbjct: 177 TILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDR 236
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PNV IY L+ + C ++ EA +L+ M G LP T+N LSGLC+ G V A
Sbjct: 237 GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEA 296
Query: 431 LK---LVEEDMRGIG--------------RGSLPGSGHY--------SP-------LIKA 458
+ ++++ +G R G G+Y SP +I+
Sbjct: 297 FQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRG 356
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E G + A L M KG +PD +N++L
Sbjct: 357 CAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVL 389
>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Cucumis sativus]
Length = 830
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 234/498 (46%), Gaps = 45/498 (9%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR 65
+P E +I GL + D + ++ + PS+ N+I+ K ID+AR
Sbjct: 233 APQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVAR 291
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+F+ M+ +G+ D ++Y IL+ GLC+ + + M+ GV+P+ V YNTL
Sbjct: 292 SFF-CLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKG 350
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
G + AR ++ M P+ VT++ LIC +C+ N+ AL L +++ S GF +
Sbjct: 351 FLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLN 410
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
V+ +L LC VGR+ +A+ + + EME P+ Y+I
Sbjct: 411 VIFYNMLLSCLCKVGRIEEALTLFD-------------------EMETLRLEPDFIVYSI 451
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID------DGLKILQ 295
LI C+ G + A ++ M++ + ++ GL G I D +
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEK-LFPRAVDRSLKILGFCV 353
LMED + YN ++ G R + EA++ Y K +E+ + P V + I GFC
Sbjct: 512 LMED--------VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCR 563
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G++ +A++ + + +G VP+VV Y L++AYC+ ++E + EM + +P T
Sbjct: 564 RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVT 623
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ ++ GLCRQ + +L+L+E +G LP S Y+ +I+ C+ A L
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLE---YMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYN 680
Query: 474 QMVGKGILPDYLTWNSLL 491
M+ P +T+ L+
Sbjct: 681 MMLLHNCDPTQVTYKVLI 698
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 228/486 (46%), Gaps = 42/486 (8%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD 81
R MI+D + + N S+ +NS+L + DI ++ SG +
Sbjct: 181 SRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWD---VYNEIKVSGAPQSE 237
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
T +IL+ GLC +++ D LH ++ V P+ V NT++ CK G + ARS
Sbjct: 238 CTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCL 296
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M + + +++IL+ C ++ AL + G PDVVT + + G
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAK-----GF 351
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
++ LG + G + +++M +G P++ TY LI +C+ G ++ AL
Sbjct: 352 LL--------------LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALK 397
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNS 313
+ + G N + Y+ L+ LC GRI++ L + ME R+ P Y+
Sbjct: 398 LRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETL------RLEPDFIVYSI 451
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+++GL +E A + +QM ++ FP + +LG +GN+ +A+ FD
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+ +VV+Y+ +I Y + + + EA +L +M G P TFNT+++G CR+G++ A
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K++E +G +P Y+ L+ A CE G Q L +M ++P ++T+ L+
Sbjct: 572 KMLEVIRL---KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 492 ICLSQQ 497
L +Q
Sbjct: 629 KGLCRQ 634
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 224/508 (44%), Gaps = 37/508 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
++ GL A +++ + TD + + + P + +N++ + + +KM+ G
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ D TY L+ G C + + KL SRG K N + YN L+ LCK G++ A
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVL-----LEKSFSFGFVPDVV---- 183
+L +ME EP+ + +SILI CKE + A L L++ F F V
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491
Query: 184 ----TITKVLELLCSVGRVMDAVE--ILEESGEQG--RLGKVKGGCRFLKEMERKGCLPN 235
I++ + R MD +E +L G RL + + +M +G P+
Sbjct: 492 FKNGNISEARNYFDTWTR-MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V T+N LI+ +C G L A + +++ G+ + VTY TL+ C G + + L
Sbjct: 551 VVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLH 610
Query: 296 LMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
ME + + P Y ++ GL R+N+ E+L+ L+ M + L P +V + I
Sbjct: 611 EMEANA------VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
FC + A + ++ M+ P V Y LI+A C +++ ++ +
Sbjct: 665 CFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITL 724
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ T++ C +G V AL + + +G + YS +I LC++G A
Sbjct: 725 KKVTYMTIIKAHCAKGQVSKALGYFNQ---MLAKGFVISIRDYSAVINRLCKRGLITEAK 781
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
V M+ +G+ PD ++L QQ
Sbjct: 782 YFFVMMLSEGVTPDPEICKTVLNAFHQQ 809
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 180/445 (40%), Gaps = 103/445 (23%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R++ ++ G + + Y +L+ LC R+ + L M++ ++P+ ++Y+ LIH LCK
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCK 458
Query: 129 NGKVGRARSLMSDM----EEPND-----------------------------------VT 149
G V RA L M + P+ V
Sbjct: 459 EGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVL 518
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++I+I Y + + + A+ L K G P VVT ++ C G +M+A ++LE
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV-- 576
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+ KG +P+V TY L+++YCE G + ++M+ + +
Sbjct: 577 -----------------IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLYRENQQDE 326
VTY LI+GLC ++ + L++L+ M +KG + YN+++ + + +
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMY-----AKGLLPDSVTYNTIIQCFCKGKEITK 674
Query: 327 ALEY----------------------------LKQMEKLFPRAVDRSLK---------IL 349
AL+ LK ++++ DR++ I
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIK 734
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
C G V A F+QM+ +G V ++ Y +I+ C+ + EA M G P
Sbjct: 735 AHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTP 794
Query: 410 IASTFNTVLSGLCRQGNVGTALKLV 434
TVL+ +QGN + + +
Sbjct: 795 DPEICKTVLNAFHQQGNNSSVFEFL 819
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 186/416 (44%), Gaps = 37/416 (8%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DID 62
+++ PD ++ +I GL + + + + + P ++L L K +I
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498
Query: 63 LARAFY----RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
AR ++ R +M D Y I++ G + + + +L + M RG+ P+ V
Sbjct: 499 EARNYFDTWTRMDLME-----DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVT 553
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF 174
+NTLI+ C+ G + AR ++ + P+ VT++ L+ AYC+ N+ L +
Sbjct: 554 FNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME 613
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
+ VP VT T +++ LC ++ +++++LE M KG LP
Sbjct: 614 ANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEY-------------------MYAKGLLP 654
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+ TYN +I +C+ + AL ++N M + VTY LI LC G + D +++
Sbjct: 655 DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMV 714
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAV-DRSLKILGFC 352
+ED K Y +++ + Q +AL Y QM K F ++ D S I C
Sbjct: 715 VSIEDRNITLKK--VTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLC 772
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G + +AK F M+ EG P+ I +++A+ Q+ E + + G++
Sbjct: 773 KRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 142/499 (28%), Positives = 222/499 (44%), Gaps = 46/499 (9%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N P K F + ++VK K + + G++ D YT I++ LC N G
Sbjct: 66 NPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFG 125
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICA 156
F +L VM GV P V + TLI+ LC G V RA +E + N T+ +I
Sbjct: 126 FSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIING 185
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVV-TITKVLELLCSVGRVMDAVEILEESGEQG--- 212
CK + A++ LEK DVV + +++ LC G V +A+ + +G
Sbjct: 186 LCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQP 245
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
G+ K L M RKG +PNV T+N+L+ ++C+ G++ A +
Sbjct: 246 DLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIM 305
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
M G+ + VTY+++I G C ++ D +K+ +LM +G + Y+S+++G
Sbjct: 306 GFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELM--IHKGFLPNLVTYSSLIHGWC 363
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ ++AL L +M L P V S I GFC G E AK F M E PN+
Sbjct: 364 KTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQ 423
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
++ + + EA L +EM +N VL G+C G + A +L
Sbjct: 424 TCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFS-- 481
Query: 438 MRGIGRGSLPGSG------HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP G Y+ +IK LC++G A LL++M G LP+ T+N +
Sbjct: 482 -------CLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFV 534
Query: 492 ICL------SQQTTWLLLL 504
L S+ T +LLL+
Sbjct: 535 RGLLQRYDISRSTKYLLLM 553
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 198/437 (45%), Gaps = 65/437 (14%)
Query: 39 RFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLT--- 94
+ + P++ F ++++ L E ++ARA + + G Q + YTY ++ GLC
Sbjct: 134 KIGVDPTVVTFATLINGLCAEG-NVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDT 192
Query: 95 ---------------------------------NRVGDGFKLLHVMKSRGVKPNSVIYNT 121
V + L M S+G++P+ V YN+
Sbjct: 193 SGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNS 252
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LIH LC G+ A +L+ +M PN TF++L+ +CK+ + A ++ G
Sbjct: 253 LIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVG 312
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PDVVT V+ C + ++ DAV++ E M KG LPN+
Sbjct: 313 VEPDVVTYNSVISGHCLLSQMGDAVKVFE-------------------LMIHKGFLPNLV 353
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+ LI +C+T ++ AL + +M G++ + VT+ TLI G C G+ + ++ M
Sbjct: 354 TYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTM 413
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ + + +L GL++ EA+ ++MEK L V ++ + G C G
Sbjct: 414 HEHDQHPNLQTCAI--ILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFG 471
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ DA+ F + +G +VV Y +I C+E + +A L+ +M +G LP T+N
Sbjct: 472 KLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYN 531
Query: 416 TVLSGLCRQGNVGTALK 432
+ GL ++ ++ + K
Sbjct: 532 VFVRGLLQRYDISRSTK 548
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 190/453 (41%), Gaps = 63/453 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T+I GL + + D + + + +I++ L K Y
Sbjct: 139 PTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILY 198
Query: 69 RKKMMASGVQGDDY-TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+K+ D Y+ +M LC V + L M S+G++P+ V YN+LIH LC
Sbjct: 199 LEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLC 258
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A +L+ +M PN TF++L+ +CK+ + A ++ G PDVV
Sbjct: 259 NFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVV 318
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T V+ C + ++ DAV++ E M KG LPN+ TY+ LI
Sbjct: 319 TYNSVISGHCLLSQMGDAVKVFEL-------------------MIHKGFLPNLVTYSSLI 359
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+T ++ AL + +M G++ + VT+ TLI G C G+ + ++ M + +
Sbjct: 360 HGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQH 419
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--------------------------- 336
+ +L GL++ EA+ ++MEK
Sbjct: 420 PNLQTCAI--ILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQ 477
Query: 337 -LFPRAVDRSLKI---------LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
LF + +KI G C +G ++DA+ +M E G +PN Y+ +
Sbjct: 478 ELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
Q + +++ + M G G A+T ++S
Sbjct: 538 LQRYDISRSTKYLLLMKGKGLSADATTTELLIS 570
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 39/156 (25%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
H P+ ++ GL + + ++ + + + N+ ++ I+N +LD
Sbjct: 414 HEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLD-------- 465
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
G+C ++ D +L + S+G+K + V Y T+
Sbjct: 466 ---------------------------GMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTM 498
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
I LCK G + A +L+ MEE PN+ T+++ +
Sbjct: 499 IKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFV 534
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 241/514 (46%), Gaps = 34/514 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PDE + T+I G IN + + + R ++ PS+ + +++D + D AR
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M +GV+ + TY+ L+ G C +++G L+ ++SR + N +Y LI C
Sbjct: 392 LYE-MQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFC 450
Query: 128 KNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+V +A+ +++D +P+ +T+S LI CK + +L + G +P+ V
Sbjct: 451 QLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNV 510
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C G +A++ + G R G + +F + M
Sbjct: 511 LYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM 570
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R +V ++N +I SYC+ G + A V+++M G + TY +L+RGLC GG +
Sbjct: 571 SRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHL 630
Query: 288 DDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ + L+E + + + N++L G+ + DEAL+ ++M + P
Sbjct: 631 VQAKEFMVYLLEKACAIDEKTL---NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTY 687
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT- 403
++ + GFC G V A M+E+G VP+ + Y CL++ E +V+ AS + +E+
Sbjct: 688 TILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIIC 747
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEK 462
G +N++++G + G + +E MR + + P S Y+ L+ +K
Sbjct: 748 KEGLYADCIAYNSMMNGYLKGGQINE----IERLMRNMHENEVYPSSASYNILMHGYIKK 803
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G L MV +GI PD +T+ L+ L +
Sbjct: 804 GQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 837
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 217/471 (46%), Gaps = 29/471 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+ +N+IL+ VK+ + M +G++ D YTY I++ LC R + L
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLL 321
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L M+ + P+ YNTLIH GK+ A + + M +P+ T++ LI YC+
Sbjct: 322 LKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
A +L + G P +T + +L C ++ A+++++ +
Sbjct: 382 NGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTM 441
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+LG+V + LK M G P+V TY+ LI+ C+ G++ ++ + M+
Sbjct: 442 YTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 501
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ N V Y TL+ C G + LK ++ + G +N++L YRE
Sbjct: 502 KSGVLPNNVLYTTLVFYFCKAGHAKEALK--YFVDIYRSGLVANSVIHNALLCSFYREGM 559
Query: 324 QDEA---LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
EA +Y+ +M+ F A + I +C GNV +A +D M+ G P++ Y
Sbjct: 560 IAEAEQFKQYMSRMKISFDVASFNCI-IDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYG 618
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ CQ + +A E M + T NT+L G+C+ G + AL L E +
Sbjct: 619 SLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCE---KM 675
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ R LP + Y+ L+ C++G A +LL M+ KG++PD + + LL
Sbjct: 676 VTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLL 726
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 219/507 (43%), Gaps = 44/507 (8%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDY 82
R MI + + +SR ++ + FN I+D + L M+ G D
Sbjct: 556 REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 615
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L++GLC + + + + + + NTL+ +CK+G + A L M
Sbjct: 616 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 675
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
P+ T++IL+ +CK +V AL+LL+ G VPD + T +L L + G+V
Sbjct: 676 VTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 735
Query: 199 MDAVEILEE------------SGEQGRLGKVKGGC-----RFLKEMERKGCLPNVDTYNI 241
A + +E + G +KGG R ++ M P+ +YNI
Sbjct: 736 KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 795
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ Y + G L L ++ DM +GI + VTY LI GLC G I+ +K L+ M
Sbjct: 796 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM--VL 853
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQME------------------KLFPRAVD 343
EG ++ ++ +++ AL+ M+ + P V
Sbjct: 854 EGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVA 913
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S + G C G VE+A F ++ G VP + + L+H C+E ++ +A L + M
Sbjct: 914 ESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLME 973
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G T+N +++GLC + + AL L EE M+ +G LP Y L A+ G
Sbjct: 974 SCGLKVDVVTYNVLITGLCNKKCICDALDLYEE-MK--SKGLLPNITTYITLTGAMYATG 1030
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSL 490
Q LL + +GI+P Y SL
Sbjct: 1031 TMQDGEKLLKDIEDRGIVPSYKHPESL 1057
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 219/493 (44%), Gaps = 28/493 (5%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D A + SL N+IL+ LV + + K+ + D T I++
Sbjct: 178 DAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVL 237
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----E 144
LC ++ +L MK+ + PN+V YNT+++ K G+ A ++ DME E
Sbjct: 238 NSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIE 296
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+ T++I+I CK + A +LL++ PD + ++ G++ A+ I
Sbjct: 297 ADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYI 356
Query: 205 LEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ Q R G+ R L EM+ G P+ TY+ L++ YC+
Sbjct: 357 FNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCK 416
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L ALD+ ++ IS N Y LI G C G + +IL+ M +G +
Sbjct: 417 HSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCM--LADGIDPDV 474
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y++++ G+ + E E L +M+K + P V + + FC G+ ++A + F
Sbjct: 475 ITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVD 534
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
+ G V N VI++ L+ ++ +E + EA + + M+ ++FN ++ C++GN
Sbjct: 535 IYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGN 594
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
V A + + +R G P Y L++ LC+ G A +V ++ K D T
Sbjct: 595 VLEAFSVYDNMVR---HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 651
Query: 487 WNSLLICLSQQTT 499
N+LL+ + + T
Sbjct: 652 LNTLLVGICKHGT 664
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 186/429 (43%), Gaps = 28/429 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M+A G+ D TY+ L+ G+C + + ++L M+ GV PN+V+Y TL+ CK
Sbjct: 463 KCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 522
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G A D+ N V + L+C++ +E + A + DV +
Sbjct: 523 GHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASF 582
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEMER 229
+++ C G V++A + + G + +G C+ F+ +
Sbjct: 583 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K C + T N L+ C+ G LD ALD+ M I + TY L+ G C G++
Sbjct: 643 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVP 702
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSL 346
L +LQ+M + +G Y +L GL E Q A +++ E L+ + +
Sbjct: 703 ALILLQMMLE--KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNS 760
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G+ G + + +R M E P+ Y+ L+H Y ++ ++ L ++M G
Sbjct: 761 MMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG 820
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ ++ GLC G + A+K +E + + G P + + LIKA EK
Sbjct: 821 IKPDNVTYRLLIFGLCEYGLIEIAVKFLE---KMVLEGVFPDNLAFDILIKAFSEKSKMS 877
Query: 467 SASMLLVQM 475
+A L M
Sbjct: 878 NALQLFSYM 886
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 228/512 (44%), Gaps = 47/512 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T++ +A + +K + R + + I N++L +E + +
Sbjct: 507 PNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQF 566
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M + D ++ ++ C V + F + M G P+ Y +L+ LC+
Sbjct: 567 KQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 626
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A+ M + E ++ T + L+ CK L AL L EK + +PD T
Sbjct: 627 GGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYT 686
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +L+ C G+V+ A+ +L+ M KG +P+ Y L++
Sbjct: 687 YTILLDGFCKRGKVVPALILLQM-------------------MLEKGLVPDTIAYTCLLN 727
Query: 245 SYCETGVLDSALDVFNDMKI-DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
G + +A +F ++ +G+ + + Y++++ G GG+I++ ++++ M +++
Sbjct: 728 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 787
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN +++G ++ Q L + M E + P V L I G C G +E A
Sbjct: 788 PSS--ASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAV 845
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA----------------SELMKEMTGH 405
+ ++M+ EG P+ + +D LI A+ ++ ++ A EL ++M
Sbjct: 846 KFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKAL 905
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G +P ++++ GLC+ G V A+ + MR G +P ++ L+ LC++
Sbjct: 906 GVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA---GMVPTIATFTTLMHGLCKEFKI 962
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A L M G+ D +T+N L+ L +
Sbjct: 963 DDAFHLKQLMESCGLKVDVVTYNVLITGLCNK 994
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 161/355 (45%), Gaps = 27/355 (7%)
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+S + N + +L+ AY KE +++A + GF + + +L L + +
Sbjct: 152 ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKS 211
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
L+ES ++RK L +V T NI+++S C G L A +
Sbjct: 212 EYVWLFLKES------------------LDRKFPL-DVTTCNIVLNSLCTQGKLSKAESM 252
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
MK + N VTY+T++ GR L+IL ME K G + + YN ++ L
Sbjct: 253 LQKMKNCRLP-NAVTYNTILNWYVKKGRCKSALRILDDME--KNGIEADLYTYNIMIDKL 309
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ + A LK+M + L P + I GF +G + A F+QM+ + P+V
Sbjct: 310 CKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSV 369
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y LI YC+ R EA ++ EM G P T++ +L+G C+ +G AL L++
Sbjct: 370 ATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKY 429
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R R Y+ LI C+ G A +L M+ GI PD +T+++L+
Sbjct: 430 -LR--SRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALI 481
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 137/307 (44%), Gaps = 41/307 (13%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY-RKKM 72
+ +++ G + IN++ + + + PS +N ++ +K+ L+R Y + M
Sbjct: 758 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG-QLSRTLYLYRDM 816
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G++ D+ TY +L+ GLC + K L M GV P+++ ++ LI + + K+
Sbjct: 817 VKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKM 876
Query: 133 GRARSLMSDMEE--------------------PNDVTFSILICAYCKEENLVNALVLLEK 172
A L S M+ P++V S ++ CK + A+++
Sbjct: 877 SNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS 936
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
G VP + T T ++ LC ++ DA + + ME G
Sbjct: 937 IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQ-------------------LMESCGL 977
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+V TYN+LI+ C + ALD++ +MK G+ N TY TL + + G + DG K
Sbjct: 978 KVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEK 1037
Query: 293 ILQLMED 299
+L+ +ED
Sbjct: 1038 LLKDIED 1044
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P E +++RGL + + + + + R M P++ F +++ L KE + AF+
Sbjct: 909 PSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKE-FKIDDAFH 967
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K++M S G++ D TY +L+ GLC + D L MKS+G+ PN Y TL ++
Sbjct: 968 LKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 1027
Query: 128 KNGKVGRARSLMSDMEE 144
G + L+ D+E+
Sbjct: 1028 ATGTMQDGEKLLKDIED 1044
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/525 (26%), Positives = 230/525 (43%), Gaps = 45/525 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F + G+G+ ++K + R P + ++ L + ++M
Sbjct: 423 FSRCLCGVGKFEKAFQILKE---MMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMK 479
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+GV D YTY IL+ C + M+S G PN V Y L+H+ K+ ++
Sbjct: 480 RAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLI 539
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK----------SFSF--- 176
+A + M + PN VT+S LI CK + A + EK F F
Sbjct: 540 QAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGN 599
Query: 177 ---GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
P+VVT +++ LC +V DA E+L+ G ++GK+
Sbjct: 600 DTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKI 659
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
M + G LP+V TY LI + G LD A+ V ++M D + N VTY +
Sbjct: 660 DNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAM 719
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
I GL G I+ L +L LME+ +G + Y +++ GL + + D +L+ KQM
Sbjct: 720 IDGLSKVGEIEKALNLLSLMEE--KGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P V + I C G +++A D+M ++ Y C + + ++ +
Sbjct: 778 GCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIAS 835
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L++EM H +PIA + ++ + G + TAL+L +E + ++ +G Y+ L
Sbjct: 836 LGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASL 895
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
I+ALC + A L +M KGI+PD + + SL+ L + W
Sbjct: 896 IQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKW 940
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 202/453 (44%), Gaps = 49/453 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G + G +++++M + G PN ++N+L+H C G A L + M
Sbjct: 308 TYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRM 367
Query: 143 ----EEPNDVTFSILICAYCKEENLVNA--LVLLEKSF----SFGFVPDVVTITKVLELL 192
P V ++I I + C +E L NA L L+EK + + V + V L
Sbjct: 368 TTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCL 427
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
C VG+ A +IL+E +G + KV+ +EM+R G P+V
Sbjct: 428 CGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDV 487
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY ILI S+C+ G+++ A F++M+ G S N VTY L+ ++ I
Sbjct: 488 YTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHR 547
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-------EKLF----------- 338
M D+ Y++++ GL + + +A E +++ E F
Sbjct: 548 MVDA--ACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIA 605
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V I G C V DA D M+ G PN ++YD LI +C+ ++ A E+
Sbjct: 606 PNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEV 665
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
MT GYLP T+ +++ + + G + A+K++ E + P Y+ +I
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE---MLNDSCNPNVVTYTAMIDG 722
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L + G + A LL M KG P+ +T+ +L+
Sbjct: 723 LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALI 755
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 206/458 (44%), Gaps = 54/458 (11%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE- 59
S+ P+ + ++ +++ + ++A D+ R P+ +++++D L K
Sbjct: 515 SVGCSPNVVTYTALLHAYLKSKQL---IQAHDIFHRMVDAACYPNAVTYSALIDGLCKAG 571
Query: 60 DIDLARAFYRKKMMASG-VQGDDY--------------TYAILMKGLCLTNRVGDGFKLL 104
+I A Y K + SG V+ D Y TY L+ GLC +V D +LL
Sbjct: 572 EIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELL 631
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
M + G +PN ++Y+ LI CK GK+ A+ + M + P+ T++ LI K+
Sbjct: 632 DAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKD 691
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
L A+ +L + + P+VVT T +++ L VG + A+ +L
Sbjct: 692 GRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLL--------------- 736
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
ME KGC PNV TY LI +TG D++L +F M G + N+VTY LI
Sbjct: 737 ----SLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINH 792
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLF 338
C+ G +D+ +L M+ + + Y+ + G ++ +L L++ME +
Sbjct: 793 CCAAGLLDEAHLLLDEMKHTH--WPKHLQGYHCAVQGFSKKFIA--SLGLLEEMESHETV 848
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV---IYDCLIHAYCQEERVREA 395
P A + I F G +E A +++E N+ +Y LI A C +V EA
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEA 908
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
L EMT G +P F +++ GL AL+L
Sbjct: 909 FTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 200/500 (40%), Gaps = 49/500 (9%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
++R R + ++ ++ + F PS +N+++ VL +K+M ASG
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
D T + LC R D L++++ ++V+ +I L + A
Sbjct: 235 FCMDRSTIGYFAQALCKVGRWADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAM 291
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
S + M PN VT+ L+ + K++ ++ + G P+ ++
Sbjct: 292 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGY 351
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC----- 247
C+ G A + M G P YNI I S C
Sbjct: 352 CNAGDYAYAY-------------------KLFNRMTTCGSPPGYVAYNIFIGSICGQEEL 392
Query: 248 -ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+LD V+ +M N V R LC G+ + +IL+ M ++G
Sbjct: 393 PNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEM--MRKGFVP 450
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
S Y V+ L + + +++ ++M++ + P ++ I FC G +E A+ F
Sbjct: 451 DTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWF 510
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M G PNVV Y L+HAY + +++ +A ++ M P A T++ ++ GLC+
Sbjct: 511 DEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKA 570
Query: 425 GNVGTALKL----------VEEDMRGIGRGSL---PGSGHYSPLIKALCEKGGFQSASML 471
G + A ++ VE D G + P Y LI LC+ A L
Sbjct: 571 GEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHEL 630
Query: 472 LVQMVGKGILPDYLTWNSLL 491
L M+ G P+ + +++L+
Sbjct: 631 LDAMLAAGCEPNQIVYDALI 650
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 154/401 (38%), Gaps = 67/401 (16%)
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL------------------ 191
++L+ C+ AL L + FG+ P VT ++++
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231
Query: 192 -----------------LCSVGRVMDAVEILEESGEQGRLGKV---------------KG 219
LC VGR DA+ +LE+ E L V
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNMLEK--EDFNLDTVLCTQMISGLMEASLFNE 289
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
FL M C+PNV TY L+S + + + N M +G + N +++L+
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
G C+ G K+ M GS YN + + + + A E L +EK++
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTC--GSPPGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYE 406
Query: 340 RAVDRS-----LKILGF----CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+ S + F C G E A + +M+ +G VP+ Y +I CQ +
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+V ++ L +EM G P T+ ++ C+ G + A +E MR + G P
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDE-MRSV--GCSPNVV 523
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ L+ A + A + +MV P+ +T+++L+
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALI 564
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 125/319 (39%), Gaps = 58/319 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P++ ++ +I G + I++ + +++ PS+ + S++D + K+ +DLA
Sbjct: 641 PNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ + TY ++ GL + LL +M+ +G PN V Y LI L
Sbjct: 701 L-SEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLG 759
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILI---CA------------------------ 156
K GK + L M PN VT+ +LI CA
Sbjct: 760 KTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQ 819
Query: 157 --YCK----EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE--- 207
+C + + +L LLE+ S VP +++ GR+ A+E+ +E
Sbjct: 820 GYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879
Query: 208 ---------SGEQGRL-------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+G L +V+ EM RKG +P++ + L+ E
Sbjct: 880 VSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNK 939
Query: 252 LDSALDVFNDMKIDGISWN 270
D AL + +G++W
Sbjct: 940 WDEALQLCYGRCHEGVNWQ 958
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 143/510 (28%), Positives = 228/510 (44%), Gaps = 33/510 (6%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDL 63
++ PP+ ++ L R R V + DL+ P++ FN ++D L KE ++
Sbjct: 163 LRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNIVIDFLCKEGELVE 218
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
ARA + +M A G D TY L+ G + + +L+ M+ G + V YN LI
Sbjct: 219 ARALF-VRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALI 277
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ K G++ +A S +M+ N VTFS + A+CKE + A+ L + G +
Sbjct: 278 NCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+ T T +++ C GR+ DA+ +L+E QG + GKV
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L MER G N Y LI + + ALD+ N MK G+ + Y TLI GLC
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
++D+ +L M G + Y +++ L++ ++ EA+ L ++ P
Sbjct: 458 DQKVDEAKSLLHKMAGC--GLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNV 515
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V I G C G++ +A F++M E G PNV Y LI +C+ + +A LM E
Sbjct: 516 VTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNE 575
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G + +++ G +Q N+ A L + I G Y+ I C
Sbjct: 576 MIDKGMSLDKVVYTSLIDGYMKQANLQDAFAL---KTKMIESGLQLDLYCYTCFISGFCN 632
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A +L +M+G GI PD +N L+
Sbjct: 633 MNMMQEARGVLSEMIGTGITPDKTVYNCLI 662
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 204/447 (45%), Gaps = 60/447 (13%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYC 158
D + L ++ V PN+ N ++ L +N + G R L + PN TF+I+I C
Sbjct: 152 DAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLC 211
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
KE LV A L + + G PDVVT +++ G + + +++ E + G
Sbjct: 212 KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVV 271
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ G+++ + EM+R+G + NV T++ + ++C+ G++ A+ +F M
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGL------------------------------- 291
++ G+ N TY +L+ G C GR+DD +
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391
Query: 292 ----KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+L LME + G K Y ++++G + N + AL+ L QM K +D SL
Sbjct: 392 AEADNVLSLME--RGGVKANELLYTTLIHGHFMNNNSERALDLLNQM-KNKGMELDVSLY 448
Query: 348 ---ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
I G C D V++AK +M G PN VIY ++ A + + EA L+ ++
Sbjct: 449 GTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILD 508
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G+ P T+ ++ GLC+ G++ A+ + MR +G P Y+ LI C+ G
Sbjct: 509 SGFQPNVVTYCALIDGLCKAGSISEAISHFNK-MRELGLD--PNVQAYTALIDGFCKIGS 565
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A L+ +M+ KG+ D + + SL+
Sbjct: 566 LNKAMHLMNEMIDKGMSLDKVVYTSLI 592
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 172/388 (44%), Gaps = 24/388 (6%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
+ R + ++ F++ +D KE + +M G+ +++TY L+ G C R
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
+ D LL M +G+ PN V Y ++ LCK GKV A +++S ME + N++ ++
Sbjct: 356 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI + N AL LL + + G DV ++ LC +V +A +L + G
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG 475
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ GK L ++ G PNV TY LI C+ G + A+
Sbjct: 476 LRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAI 535
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
FN M+ G+ N Y LI G C G ++ + ++ M D +G Y S++
Sbjct: 536 SHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMID--KGMSLDKVVYTSLID 593
Query: 317 GLYRE-NQQDEALEYLKQMEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
G ++ N QD K +E L + I GFC +++A+ +MI G P
Sbjct: 594 GYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 653
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEM 402
+ +Y+CLI Y + + EAS L EM
Sbjct: 654 DKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 182/408 (44%), Gaps = 43/408 (10%)
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
L+ + F VP+V T V++ LC G +++A + F++ M+
Sbjct: 187 LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARAL------------------FVR-MK 227
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC P+V TYN LI Y + G L+ + ++M+ G + + VTY+ LI GR++
Sbjct: 228 AMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRME 287
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
M+ ++G + +++ + +E EA++ QM + P +
Sbjct: 288 KAYSYFGEMK--RQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTS 345
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C G ++DA D+M+ +G VPNVV Y ++ C+E +V EA ++ M G
Sbjct: 346 LVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGG 405
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ T++ G N AL L+ + M+ +G Y LI LC+
Sbjct: 406 VKANELLYTTLIHGHFMNNNSERALDLLNQ-MKN--KGMELDVSLYGTLIWGLCKDQKVD 462
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICL-----SQQTTWLLLLLLN-----EMVSFVMVV 516
A LL +M G G+ P+ + + +++ L + LL +L+ +V++ ++
Sbjct: 463 EAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALI 522
Query: 517 HELSAKEKRCKLRSLNH-LAHGAGSVWLGLRIHDTTHTFIIDRRVEIG 563
L CK S++ ++H LGL + +T +ID +IG
Sbjct: 523 DGL------CKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIG 564
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 140/345 (40%), Gaps = 55/345 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E + +++ G +A ++D + D + + P++ + ++D L KE
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M GV+ ++ Y L+ G + N LL+ MK++G++ + +Y TLI LCK
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCK 457
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ KV A+SL+ M PN V ++ ++ A K A+ LL K GF P+VVT
Sbjct: 458 DQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVT 517
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ LC G + +A+ + E G ++G + + EM
Sbjct: 518 YCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMI 577
Query: 229 RKG-----------------------------------CLPNVDTYNILISSYCETGVLD 253
KG ++ Y IS +C ++
Sbjct: 578 DKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQ 637
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
A V ++M GI+ + Y+ LIR G +++ + ME
Sbjct: 638 EARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P VD L +L G ++DA R ++ + PN + H + R R+
Sbjct: 133 LPSVVDTLLSLLA--DHGLLDDAVRALARVRQLRVPPNTRTCN---HILLRLARNRQGG- 186
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L++ + +P TFN V+ LC++G + A L +R G P Y+ LI
Sbjct: 187 LVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALF---VRMKAMGCSPDVVTYNSLID 243
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ G + L+ +M G D +T+N+L+ C S+
Sbjct: 244 GYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSK 282
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 215/447 (48%), Gaps = 27/447 (6%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+D A R + + G + D +Y +++GLC+ R G L+ M + G PN V ++
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI LC+NG R + + M E P+ ++ +I CKEE L A +L + S+
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G P+VV +L+ LCS R +A +L E ++ + G V
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
L++M GC+P+V TY +I+ +C+ G++D A+ + M G N V+Y +++G
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKG 436
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
LCS R D +++ M ++G +N+++ L ++ ++A+E LKQM
Sbjct: 437 LCSAERWVDAEELMSQM--IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCS 494
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + S I G GN ++A + M+++G PN +IY + A E R+ + ++
Sbjct: 495 PDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQM 554
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ + A +N V+S LC++G A++ + + G +P Y+ LI+
Sbjct: 555 FENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLA---YMVSSGCVPNESTYTILIRG 611
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYL 485
L +G + A +L ++ KG L +L
Sbjct: 612 LASEGFVKEAQEILTELCSKGALRKHL 638
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 204/444 (45%), Gaps = 28/444 (6%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK----NGKV 132
V + YTY L++ LC R+ D +L M RG P +Y+ + + C+ G V
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166
Query: 133 GRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSF-SFGFVPDVVTITKVLEL 191
G R L + ++++ A C + + A+ LL SFG PDVV+ VL
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226
Query: 192 LCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPN 235
LC R +++EE G R G + +M GC P+
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V Y +I C+ L+ A + N M G+S N V Y+TL++GLCS R ++ +L
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
M D K+ ++ +N ++ L + D +E L+QM P + + I GFC
Sbjct: 347 EMFD-KDCPLDDVT-FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+G +++A M G PN V Y ++ C ER +A ELM +M G P T
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
FNT+++ LC++G V A++L+++ + G P YS +I L + G A LL
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGNTDEALELLN 521
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ 497
MV KG+ P+ + ++S+ LS +
Sbjct: 522 VMVKKGMSPNTIIYSSIASALSGE 545
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 198/422 (46%), Gaps = 24/422 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + V+RGL AR V + + P++ F++++ L + +
Sbjct: 215 PDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEV 274
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D YA ++ G+C R+ +L+ M S G+ PN V YNTL+ LC
Sbjct: 275 HAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCS 334
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L+++M + +DVTF+IL+ C+ + + +LE+ G +PDV+T
Sbjct: 335 ADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVIT 394
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-RLGKV------KGGC---------RFLKEME 228
T V+ C G + +AV +L G R V KG C + +M
Sbjct: 395 YTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMI 454
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++GC PN T+N LI+ C+ G+++ A+++ M ++G S + ++Y T+I GL G D
Sbjct: 455 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTD 514
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSL 346
+ L++L +M K+G Y+S+ L E + ++ ++ + ++ R AV +
Sbjct: 515 EALELLNVM--VKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNA 572
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I C G + A M+ G VPN Y LI E V+EA E++ E+ G
Sbjct: 573 VISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632
Query: 407 YL 408
L
Sbjct: 633 AL 634
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 204/452 (45%), Gaps = 34/452 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y ++ G C R G + S V PN+ Y L+ +LC G++ A +++ DM
Sbjct: 82 YNAMVAGYC---RAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
P + + + A C+ A+ +L G DV VL+ +C G V
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 200 DAVEILE--------ESGEQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNIL 242
+AV +L E ++G C ++EM GC PN+ T++ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C G+ + +V M G + + Y T+I G+C R++ IL M
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRM--PSY 316
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL--GFCVDGNVED 359
G + YN++L GL ++ +EA L +M +K P D + IL C +G V+
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLD-DVTFNILVDFLCQNGLVDR 375
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
+QM+E G +P+V+ Y +I+ +C+E + EA L++ M G P ++ VL
Sbjct: 376 VIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLK 435
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLC A +L+ + I +G P ++ LI LC+KG + A LL QM+ G
Sbjct: 436 GLCSAERWVDAEELMSQ---MIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 492
Query: 480 ILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMV 510
PD +++++++ L + T L LLN MV
Sbjct: 493 CSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 177/403 (43%), Gaps = 30/403 (7%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVT-FSILICAYCKEENLVNALVLLEKSFSFGF 178
+ LI SLC G+ A +S V ++ ++ YC+ L A + S
Sbjct: 51 SALIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLAAARR---LAASVPV 107
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
P+ T ++ LC+ GR+ DA+ +L++ +G R +G
Sbjct: 108 APNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVG 167
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-GISWNFVTYDTLIRGL 281
L+++ +GC +V N+++ + C+ G +D A+ + D+ G + V+Y+ ++RGL
Sbjct: 168 VLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGL 227
Query: 282 CSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
C R + LME+ G I +++++ L R + E QM +
Sbjct: 228 CMARRWG---HVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + I G C + +E A+ ++M G PNVV Y+ L+ C +R EA L
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ EM TFN ++ LC+ G V ++++E+ + G +P Y+ +I
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLE---HGCMPDVITYTTVING 401
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
C++G A MLL M G P+ +++ +L L W+
Sbjct: 402 FCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWV 444
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 23/291 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P D+ F ++ L + +++ V++ + + P + + ++++ KE +
Sbjct: 354 PLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 413
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M A G + + +Y I++KGLC R D +L+ M +G PN V +NTLI+ LC
Sbjct: 414 LLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLC 473
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +A L+ M P+ +++S +I K N AL LL G P+ +
Sbjct: 474 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTI 533
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ + L GR+ +++ E ++ + YN +I
Sbjct: 534 IYSSIASALSGEGRINKVIQMFE-------------------NIQDTTVRSDAVLYNAVI 574
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
SS C+ G D A++ M G N TY LIRGL S G + + +IL
Sbjct: 575 SSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 148/545 (27%), Positives = 247/545 (45%), Gaps = 45/545 (8%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDD-----YTYAILMK 89
+V N PS NS+L++LVK I+ A Y + M GDD YT +I++K
Sbjct: 159 VVKLHNSLPSTYACNSLLNLLVKHRRIETAHQLYDE--MIDRDNGDDICVDNYTTSIMVK 216
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
GLCL R+ DG KL+ +G PN V YNTLI CK G+V A L ++ P
Sbjct: 217 GLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIP 276
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
TF L+ +CK +LL + G +V +++ +G + A + L
Sbjct: 277 TLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTL 336
Query: 206 EESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+E E G+V+ + L++ R+G PN TY L+ YC+
Sbjct: 337 KEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQ 396
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G A D +M G+ + ++Y LI GL G +D L I M + G +
Sbjct: 397 GEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMN--RGILPDAN 454
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN ++ GL+++ + A L +M + + P A + + GF GN+++AK+ F +
Sbjct: 455 IYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLI 514
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
IE+G P VV Y+ +I + + + A + +M ++P TF+T++ G +Q N+
Sbjct: 515 IEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNM 574
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
LK+ + + P Y+ LI C KG + A L M G+ P +T+
Sbjct: 575 NAVLKIFG---LMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTY 631
Query: 488 NSLL--IC----LSQQTTWLLLLLLNEM----VSFVMVVHELSAKEKRCKLRSLNHLAHG 537
+ L+ C L + ++ L+L+N+ +F +V+ + + R N+L
Sbjct: 632 SILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHEN 691
Query: 538 AGSVW 542
+ S++
Sbjct: 692 SRSMF 696
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 205/495 (41%), Gaps = 44/495 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I + + K + R + P+ + ++ K+ Y
Sbjct: 346 PDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDY 405
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M SG++ D +Y L+ GL + V + M +RG+ P++ IYN L++ L K
Sbjct: 406 LIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFK 465
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A+ ++++M + P+ ++ L+ + + NL A L + G P VV
Sbjct: 466 KGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVG 525
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ G + +A+ ++ +M R +P++ T++ +I
Sbjct: 526 YNVMIKGFSKSGMMDNAILCID-------------------KMRRAHHVPDIFTFSTIID 566
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y + +++ L +F M N VTY +LI G C G K+ +M G
Sbjct: 567 GYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRS--HGL 624
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC---------V 353
K + Y+ ++ +E + +A+ Y + M K P + GF
Sbjct: 625 KPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSRE 684
Query: 354 DGNVEDAKRC-----FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
N+ + R F +MI +G Y+C++ CQ+ V+ A +L +M G
Sbjct: 685 PNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLC 744
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
A +F ++ G+C +GN ++ D+ G L + YS + +GG A
Sbjct: 745 SDAVSFVALIHGICLEGNSKEWRNMISCDL---NEGELQIALKYSLELDKFIPEGGISEA 801
Query: 469 SMLLVQMVGKGILPD 483
S +L M+ + P+
Sbjct: 802 SGILQAMIKGYVSPN 816
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 208/448 (46%), Gaps = 31/448 (6%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ PS + N +LDV V +++A + +M GV D ++ +++ C RV +
Sbjct: 185 LVPSTQTLNCVLDVAVGMGLVEIAENMF-VEMCQRGVSPDCVSFKLMVVACCNMGRVLEA 243
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+ L+ M RG ++ +I + C+ G V R M E PN + F+ LI
Sbjct: 244 ERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALING 303
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
CK+ ++ A LLE+ G+ P+V T T +++ LC G A +
Sbjct: 304 LCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL------------ 351
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
FLK + G PNV TY +I+ YC+ L+ A + + M+ G+ N TY T
Sbjct: 352 ------FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
LI G C G +++ LM KEG I YN+++ GL ++ DEA L ++
Sbjct: 406 LIDGHCKVGNFVRAYELMDLM--GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSV 463
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L V ++ + C + + F++M++ G P++ Y LI +C++++++E
Sbjct: 464 HGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKE 523
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
+ L +E G +P T+ +++ G CR GN A+KL + R G P S Y
Sbjct: 524 SERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ---RMSNHGCAPDSITYGA 580
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILP 482
LI LC++ A L M+ KG+ P
Sbjct: 581 LISGLCKESKLDDARNLYDAMMDKGLSP 608
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 188/426 (44%), Gaps = 50/426 (11%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y KM+ G+ + + L+ GLC + F+LL M RG KPN + TLI LC
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 128 KNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A L SD +PN T++ +I YCKE+ L A +LL + G VP+
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T +++ C VG + A E+++ G++G PN+ TYN +
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS-------------------PNIYTYNAI 441
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C+ G LD A + N + + G+ + VTY L+ C + L M K
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM--LKV 499
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL---------KILGFCV 353
G I Y +++ R+ Q +K+ E+LF AV L I G+C
Sbjct: 500 GFTPDIHSYTTLISTFCRQKQ-------MKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
GN A + F +M G P+ + Y LI C+E ++ +A L M G P T
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612
Query: 414 FNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+ C++ + TA+ +++ + R R + L++ LC +G A++
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQWIRT-------VNTLVRKLCSEGKLDMAALFF 665
Query: 473 VQMVGK 478
+++ K
Sbjct: 666 HKLLDK 671
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 173/377 (45%), Gaps = 27/377 (7%)
Query: 141 DMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
++E N+V ++ + + L A+ ++ + + G VP T+ VL++ +G V
Sbjct: 149 NLERANEV-MQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEI 207
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A + E ++G +G+V R+L M +G + + T ++I
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIID 267
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
++C+ G ++ + F M G++ N + + LI GLC G I ++L+ E + G
Sbjct: 268 AFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLE--EMVRRGW 325
Query: 305 KGRISPYNSVLYGLYRENQQDEALE-YLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
K + + +++ GL ++ ++A +LK + + P + I G+C + + A+
Sbjct: 326 KPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAE 385
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M E+G VPN Y LI +C+ A ELM M G+ P T+N ++ GL
Sbjct: 386 MLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGL 445
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSG-HYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C++G++ A +L+ + + L G Y+ L+ C + + + +M+ G
Sbjct: 446 CKKGSLDEAYRLLNK----VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501
Query: 481 LPDYLTWNSLLICLSQQ 497
PD ++ +L+ +Q
Sbjct: 502 TPDIHSYTTLISTFCRQ 518
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 139/327 (42%), Gaps = 40/327 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + T+I G + + DL+ + +P++ +N+I+D L K+ +D A
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA--- 454
Query: 68 YR--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
YR K+ G+Q D TY ILM C + M G P+ Y TLI +
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIST 514
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ ++ + L + P T++ +IC YC+ N A+ L ++ + G PD
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+T ++ LC ++ DA + + M KG P T
Sbjct: 575 SITYGALISGLCKESKLDDARNLYD-------------------AMMDKGLSPCEVTRLT 615
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L YC+ +A++V + +++ W T +TL+R LCS G++D + D K
Sbjct: 616 LAYEYCKKDDSSTAINVLD--RLEKRQW-IRTVNTLVRKLCSEGKLDMAALFFHKLLD-K 671
Query: 302 EGSKGRIS-------PYNSVLYGLYRE 321
E + R++ Y S YGL E
Sbjct: 672 EPNVNRVTLLGFMNKCYESNKYGLVSE 698
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 205/430 (47%), Gaps = 32/430 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLC 127
++M G + ++Y IL+KGLC NR + +LL +M G P+ V Y T+I+
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +A +M + PN VT+S +I A CK + + A+ +L G +P+
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ CS G+ +A+ FLK+M G P+V TYN L+
Sbjct: 271 TYNSIVHGYCSSGQPKEAIG-------------------FLKKMHSDGVEPDVVTYNSLM 311
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G A +F+ M G+ TY TL++G + G + + +L LM + G
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRNG 369
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
++ ++ ++ + D+A+ +M + L P V I C G VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R F+QMI+E P ++Y+ LIH+ C ++ +A EL+ EM G FN+++
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++G V + KL + +R G P YS LI C G A+ LL MV G+
Sbjct: 490 CKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 482 PDYLTWNSLL 491
PD +T+N+L+
Sbjct: 547 PDCVTYNTLI 556
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 211/438 (48%), Gaps = 32/438 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + T+++G + ++ DL+ R + P+ +F+ ++ K+ +D A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D TY ++ LC + RV D + M + P +++YN+LIHSLC
Sbjct: 397 F-SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A+ L+ +M + + + F+ +I ++CKE ++ + L + G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G++ +A + L M G P+ TYN LI
Sbjct: 516 TYSTLIDGYCLAGKMDEAT-------------------KLLASMVSVGMKPDCVTYNTLI 556
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+ ++ AL +F +M+ G+S + +TY+ +++GL R ++ + +S G
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--G 614
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
++ +S YN +L+GL + N DEAL + + + R+ I+ G ++AK
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + G VP+V Y + ++ + E +L M +G + N+++ L
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734
Query: 422 CRQGNV---GTALKLVEE 436
++G++ GT L +++E
Sbjct: 735 LQRGDITRAGTYLFMIDE 752
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 171/382 (44%), Gaps = 26/382 (6%)
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+D PN T+ ILI + C L L GF D + T +L+ LC+ R
Sbjct: 84 ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143
Query: 200 DAVEI-LEESGEQGRLGKV-------KGGC---------RFLKEMERKG--CLPNVDTYN 240
DA++I L + G + V KG C L+ M G C P+V +Y
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+I+ + + G LD A +++M GI N VTY ++I LC +D +++L M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM--V 261
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
K G YNS+++G Q EA+ +LK+M + + P V + + C +G
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A++ FD M + G P + Y L+ Y + + E L+ M +G P F+ ++
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+QG V A+ LV MR +G P + Y +I LC+ G + A QM+ +
Sbjct: 382 CAYAKQGKVDQAM-LVFSKMR--QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
+ P + +NSL+ L W
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKW 460
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 171/378 (45%), Gaps = 25/378 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD + TVI L ++ + D ++ + + ++P ++NS++ L + + D A+
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ G+ D + ++ C RV + KL +M GVKP+ + Y+TLI C
Sbjct: 467 ILE-MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GK+ A L++ M +P+ VT++ LI YCK + +ALVL + S G PD++
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESGEQGRLGK----VKGGCRF-----LKEMERKG 231
T +L+ L R A E+ + ESG Q L + G C+ M +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Query: 232 CLPNVD----TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
CL ++ T+NI+I + + G D A D+F + +G+ + TY + L G +
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSL 346
++ + ME++ + R+ NS++ L + A YL + EK F +
Sbjct: 706 EELDDLFLSMEENGCTANSRM--LNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTAS 763
Query: 347 KILGFCVDGNVEDAKRCF 364
L G ++ C
Sbjct: 764 LFLDLLSGGKYQEYHSCI 781
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 10/277 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + T+I G A +++ K + M P +N++++ K ++ A
Sbjct: 512 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVL 571
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ M +SGV D TY I+++GL T R +L + G + YN ++H LC
Sbjct: 572 FRE-MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC 630
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KN A + ++ + TF+I+I A K A L + G VPDV
Sbjct: 631 KNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVR 690
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + + E L G + + ++ E G + ++++ ++G + TY +I
Sbjct: 691 TYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMI 750
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ S +F D+ G + Y + IRG
Sbjct: 751 DEK-HFSLEASTASLFLDLLSGG---KYQEYHSCIRG 783
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 205/430 (47%), Gaps = 32/430 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLC 127
++M G + ++Y IL+KGLC NR + +LL +M G P+ V Y T+I+
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +A +M + PN VT+S +I A CK + + A+ +L G +P+
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ CS G+ +A+ FLK+M G P+V TYN L+
Sbjct: 271 TYNSIVHGYCSSGQPKEAIG-------------------FLKKMHSDGVEPDVVTYNSLM 311
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G A +F+ M G+ TY TL++G + G + + +L LM + G
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRNG 369
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
++ ++ ++ + D+A+ +M + L P V I C G VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R F+QMI+E P ++Y+ LIH+ C ++ +A EL+ EM G FN+++
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++G V + KL + +R G P YS LI C G A+ LL MV G+
Sbjct: 490 CKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 482 PDYLTWNSLL 491
PD +T+N+L+
Sbjct: 547 PDCVTYNTLI 556
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 211/438 (48%), Gaps = 32/438 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + T+++G + ++ DL+ R + P+ +F+ ++ K+ +D A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D TY ++ LC + RV D + M + P +++YN+LIHSLC
Sbjct: 397 F-SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A+ L+ +M + + + F+ +I ++CKE ++ + L + G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G++ +A + L M G P+ TYN LI
Sbjct: 516 TYSTLIDGYCLAGKMDEAT-------------------KLLASMVSVGMKPDCVTYNTLI 556
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+ ++ AL +F +M+ G+S + +TY+ +++GL R ++ + +S G
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--G 614
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
++ +S YN +L+GL + N DEAL + + + R+ I+ G ++AK
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + G VP+V Y + ++ + E +L M +G + N+++ L
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734
Query: 422 CRQGNV---GTALKLVEE 436
++G++ GT L +++E
Sbjct: 735 LQRGDITRAGTYLFMIDE 752
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 170/382 (44%), Gaps = 26/382 (6%)
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+D PN T+ ILI + C L L GF D + T +L+ LC+ R
Sbjct: 84 ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143
Query: 200 DAVEI-LEESGEQGRLGKV-------KGGC---------RFLKEMERKG--CLPNVDTYN 240
DA++I L + G + V KG C L+ M G C P+V +Y
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+I+ + + G LD A +++M GI N VTY ++I LC +D +++L M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM--V 261
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
K G YNS+++G Q EA+ +LK+M + P V + + C +G
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A++ FD M + G P + Y L+ Y + + E L+ M +G P F+ ++
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+QG V A+ LV MR +G P + Y +I LC+ G + A QM+ +
Sbjct: 382 CAYAKQGKVDQAM-LVFSKMR--QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
+ P + +NSL+ L W
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKW 460
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 171/378 (45%), Gaps = 25/378 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD + TVI L ++ + D ++ + + ++P ++NS++ L + + D A+
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ G+ D + ++ C RV + KL +M GVKP+ + Y+TLI C
Sbjct: 467 ILE-MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GK+ A L++ M +P+ VT++ LI YCK + +ALVL + S G PD++
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESGEQGRLGK----VKGGCRF-----LKEMERKG 231
T +L+ L R A E+ + ESG Q L + G C+ M +
Sbjct: 586 TYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNL 645
Query: 232 CLPNVD----TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
CL ++ T+NI+I + + G D A D+F + +G+ + TY + L G +
Sbjct: 646 CLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLL 705
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSL 346
++ + ME++ + R+ NS++ L + A YL + EK F +
Sbjct: 706 EELDDLFLSMEENGCTANSRM--LNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTAS 763
Query: 347 KILGFCVDGNVEDAKRCF 364
L G ++ C
Sbjct: 764 LFLDLLSGGKYQEYHSCI 781
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 252/542 (46%), Gaps = 66/542 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
++S+F +IR +AR + + +A L+ T S+ N+++ LV+ ++LA Y
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 69 RKKMMASGVQGDDYTYAILMKGLCL---TNRVG--------------------------- 98
+++ SGV + YT I++ LC +VG
Sbjct: 224 -QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 99 -----DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ F+L++ M +G P YNT+I+ LCK+GK RA+ + ++M P+ T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ L+ CK+ ++V + S VPD+V + ++ L G + A+
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 210 EQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
E G + ++G CR EM ++GC +V TYN ++ C+ +L
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A +FN+M + + T LI G C G + + +++ Q M++ + + + YN+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR--IRLDVVTYNT 520
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+L G + D A E M +++ P + S+ + C G++ +A R +D+MI +
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P V+I + +I YC+ + +++M G++P ++NT++ G R+ N+ A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 432 KLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
LV+ E+ +G G +P Y+ ++ C + + A ++L +M+ +G+ PD T+
Sbjct: 641 GLVKKMEEEQG---GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 490 LL 491
++
Sbjct: 698 MI 699
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 187/394 (47%), Gaps = 36/394 (9%)
Query: 29 DVVKA----TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYT 83
DVV+ +D+ SR ++ P L F+S++ + + ++D A ++ + +G+ D+
Sbjct: 355 DVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYF-NSVKEAGLIPDNVI 412
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y IL++G C + L + M +G + V YNT++H LCK +G A L ++M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P+ T +ILI +CK NL NA+ L +K DVVT +L+ VG +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A EI +M K LP +Y+IL+++ C G L A V+
Sbjct: 533 TAKEIW-------------------ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M I + +++I+G C G DG L+ M EG YN+++YG
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM--ISEGFVPDCISYNTLIYGFV 631
Query: 320 RENQQDEALEYLKQMEK----LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
RE +A +K+ME+ L P + + GFC +++A+ +MIE G P+
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
Y C+I+ + ++ + EA + EM G+ P
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 199/455 (43%), Gaps = 59/455 (12%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
S +D + +L++ ++ + + +++S+G + N LI SL + G V
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 135 ARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A + ++ N T +I++ A CK+ + L + G PD+VT ++
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
S G + +A E+ + M KG P V TYN +I+ C+ G
Sbjct: 279 AYSSKGLMEEAFEL-------------------MNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ A +VF +M G+S + TY +L+ C G + + K+ M S++ +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR-SRDVVPDLVC- 377
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
++S++ R D+AL Y +++ L P V ++ I G+C G + A ++M+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
++G +VV Y+ ++H C+ + + EA +L EMT P + T ++ G C+ GN+
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 429 TAL----KLVEEDMR-----------GIGRGS-----------------LPGSGHYSPLI 456
A+ K+ E+ +R G G+ LP YS L+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
ALC KG A + +M+ K I P + NS++
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 158/373 (42%), Gaps = 25/373 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +++ R+ ++ + + V + P I+ ++ ++ +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R +M+ G D TY ++ GLC +G+ KL + M R + P+S LI CK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M+E + VT++ L+ + K ++ A + S +P ++
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LCS G + +A + + EM K P V N +I
Sbjct: 553 YSILVNALCSKGHLAEAFRVWD-------------------EMISKNIKPTVMICNSMIK 593
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC +G M +G + ++Y+TLI G + +++ ME+ + G
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YNS+L+G R+NQ EA L++M + P + I GF N+ +A R
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 363 CFDQMIEEGGVPN 375
D+M++ G P+
Sbjct: 714 IHDEMLQRGFSPD 726
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 25/281 (8%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R G++ L M R+ + ++ N L S++ G DS
Sbjct: 125 RSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV----------------- 167
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+D LIR ++ + + L+ +G I N+++ L R + A +
Sbjct: 168 -FDLLIRTYVQARKLREAHEAFTLLRS--KGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 333 QMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++ + +L I+ C DG +E Q+ E+G P++V Y+ LI AY +
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EA ELM M G G+ P T+NTV++GLC+ G A ++ E +R G P S
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS---GLSPDST 341
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y L+ C+KG + M + ++PD + ++S++
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 307 RISPYNSVLYGLYR-ENQQDEALEYLKQMEKLFPRAVDRSLKILG----FCVDGNVEDAK 361
R++P +V+ LYR N ++ Q+ FP SL + G + DA+
Sbjct: 75 RLNPL-AVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQ 133
Query: 362 RCFDQMIEEGGVP-----------------NVVIYDCLIHAYCQEERVREASELMKEMTG 404
C +MI GV N ++D LI Y Q ++REA E +
Sbjct: 134 SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRS 193
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKALCEKG 463
G+ N ++ L R G V A + +E R G+G + ++ ALC+ G
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT----LNIMVNALCKDG 249
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ L Q+ KG+ PD +T+N+L+ S +
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 30/413 (7%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
++++ G C + RV +LL M GVK N++ YN+L+ + + R ++ ME
Sbjct: 71 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 130
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
EP T++IL+ ++ + E+ S DV + V+ C G V
Sbjct: 131 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 190
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A E+ +E +G G PN TY LI+ +C+ G +++A +
Sbjct: 191 ASEVFDEC-----VG--------------NGIEPNEHTYGALINGFCKIGQMEAAEMLVT 231
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DM++ G+ N + ++T+I G C +D L+I +ME K G + + YN++ GL R
Sbjct: 232 DMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIME--KMGIELDVYTYNTLACGLRR 289
Query: 321 ENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
N+ DEA L+ M EK + P V + I C +G++ +A+R F +M G P++V
Sbjct: 290 ANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 349
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ ++ Y ++ +REA EM G +P ++ ++ G C G V AL+L EE
Sbjct: 350 YNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMK 409
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ RGS P Y+ LI L ++G + A L M+G G+ PD +++L+
Sbjct: 410 Q---RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 459
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 190/426 (44%), Gaps = 31/426 (7%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P S+ +P S+ V+ G ++ + + D + R + + +NS+LD +E
Sbjct: 62 PDSV-TPLSASV---VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKD 117
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A K M G++ TY IL+ GL + + MKS+ + + Y++
Sbjct: 118 DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSS 177
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I++ C+ G V RA + + EPN+ T+ LI +CK + A +L+ G
Sbjct: 178 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 237
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ + +++ C V A+EI + + ME+ G +V
Sbjct: 238 VGINQIVFNTMIDGYCRKNMVDKALEI-----------------KMI--MEKMGIELDVY 278
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN L +D A ++ M G+ N V+Y TLI C+ G + + ++ + M
Sbjct: 279 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 338
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ G++ + YN ++ G ++ EA + +MEK L P + + G CV+G
Sbjct: 339 --AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNG 396
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A R F++M + G PN+V Y LI +E R EA +L M G G P + ++
Sbjct: 397 KVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYS 456
Query: 416 TVLSGL 421
++ L
Sbjct: 457 ALVGSL 462
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 211/441 (47%), Gaps = 30/441 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + F T+I+GL +++ V D + P + +NSI++ + + D LA
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 205
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M V+ D +TY+ ++ LC + L M+++G+K + V YN+L+ LC
Sbjct: 206 LRK-MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK L+ DM PN +TF++L+ + KE L A L ++ + G P+++
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R+ +A +L+ M R C P++ T+ LI
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDL-------------------MVRNKCSPDIVTFTSLI 365
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D + VF ++ G+ N VTY L++G C G+I ++ Q M G
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHG 423
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +L GL + ++ALE + Q K+ V + I G C G VEDA
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNV+ Y +I C++ + EA+ L+++M G P T+NT++
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 422 CRQGNVGTALKLVEEDMRGIG 442
R G++ + KL+EE M+ G
Sbjct: 544 LRDGDLTASAKLIEE-MKSCG 563
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 233/499 (46%), Gaps = 43/499 (8%)
Query: 15 ITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMA 74
I + + + R+R + +V D F+ K FN +LD + K++
Sbjct: 63 IALFQEMIRSRPLPSLV---DFSRFFSAIARTKQFNLVLD-------------FCKQLEL 106
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ + YT I++ C + + +L + G +P++ +NTLI L GKV
Sbjct: 107 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 166
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L+ M E P+ VT++ ++ C+ + AL LL K DV T + +++
Sbjct: 167 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 226
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC G + A+ + +E +G + GK G LK+M + +P
Sbjct: 227 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 286
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV T+N+L+ + + G L A +++ +M GIS N +TY+TL+ G C R+ + +L
Sbjct: 287 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 346
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
LM +K I + S++ G + D+ ++ + + K L AV S+ + GFC
Sbjct: 347 DLMVRNK--CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 404
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++ A+ F +M+ G +P+V+ Y L+ C ++ +A E+ +++
Sbjct: 405 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 464
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ T++ G+C+ G V A L +G P Y+ +I LC+KG A++LL
Sbjct: 465 MYTTIIEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 521
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M G P+ T+N+L+
Sbjct: 522 RKMEEDGNAPNDCTYNTLI 540
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F ++I+G + ++D +K +S+ + + ++ ++ + I LA
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNR------------------------------- 96
+ ++M++ GV D TY IL+ GLC +
Sbjct: 416 F-QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474
Query: 97 ----VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
V D + L + +GVKPN + Y +I LCK G + A L+ MEE PND
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 534
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
T++ LI A+ ++ +L + L+E+ S GF D +I V+++L S
Sbjct: 535 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSA 581
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 16/235 (6%)
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DD + + Q M S+ + ++ + R Q + L++ KQ+E + ++
Sbjct: 60 DDAIALFQEMIRSRPLPS--LVDFSRFFSAIARTKQFNLVLDFCKQLE---LNGIAHNIY 114
Query: 348 ILGFCVDGNVEDAKRCFD-----QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
L ++ K CF ++++ G P+ ++ LI E +V EA L+ M
Sbjct: 115 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 174
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCE 461
+G P T+N++++G+CR G+ AL L+ + + R + YS +I +LC
Sbjct: 175 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT----YSTIIDSLCR 230
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL-LLLLNEMVSFVMV 515
G +A L +M KGI +T+NSL+ L + W LLL +MVS +V
Sbjct: 231 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 285
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A+ +MI+ G PN + Y LI +C+E R+ EA++++ M G S +L+
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG----DSDIRYLLA 773
Query: 420 GLCRQGNVGT 429
GL R+ G+
Sbjct: 774 GLMRKKRKGS 783
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 29/402 (7%)
Query: 39 RFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV 97
+ ++ P+++ N +LD LVK+ D Y M+A G + TY L+ G C
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVY-GDMVARGASPNVVTYGTLIDGCCRQGDF 209
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
F+L M + + P VIY LI LC ++ A S+ M PN T++ +
Sbjct: 210 LKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTM 269
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
+ YCK ++ AL L ++ G +P+VVT +++ LC ++ A
Sbjct: 270 MDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSAR----------- 318
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
+FL +M G +PN+ YN LI YC+ G L AL + ++++ I + T
Sbjct: 319 --------KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFT 370
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y LI+GLC R+++ +LQ M+ K+G YN+++ G +E ++A+E Q
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMK--KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + + P + S I G+C G +E A + +M+ +G +P+VV Y LI + ++
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
+EA L KEM G P T + ++ GLC+ G + A+KL
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/391 (29%), Positives = 181/391 (46%), Gaps = 58/391 (14%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCL 93
D+V+R +P++ + +++D ++ D +AF +M+ + Y IL++GLC
Sbjct: 183 DMVAR-GASPNVVTYGTLIDGCCRQG-DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+R+ + + M++ G+ PN YNT++ CK V +A L +M PN VT
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F ILI CK + +V+A L SFG VP++ +++ C G + +A+ + E
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 210 EQGRLGKV-------KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ L V KG C L+EM++KG LPN TYN LI YC+ G ++
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A++V + M GI N +T+ TLI G C G+++ +
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM---------------------- 458
Query: 314 VLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GLY E ++ L P V + I G DGN ++A R +M E G
Sbjct: 459 ---GLYTE----------MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTG 404
PNV CLI C++ R+ +A +L TG
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTG 536
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 176/394 (44%), Gaps = 30/394 (7%)
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L V V P N ++ L K G+ + DM PN VT+ LI C+
Sbjct: 146 LWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCR 205
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ + + A L ++ P VV T ++ LC R+ +A +
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF-------------- 251
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ M G LPN+ TYN ++ YC+ + AL+++ +M DG+ N VT+ LI
Sbjct: 252 -----RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
GLC + K L ++ + G I YN ++ G + EAL ++EK +
Sbjct: 307 GLCKTDEMVSARKFL--IDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEI 364
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P S+ I G C +E+A +M ++G +PN V Y+ LI YC+E + +A E
Sbjct: 365 LPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIE 424
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+ +MT G P TF+T++ G C+ G + A+ L E + +G LP Y+ LI
Sbjct: 425 VCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE---MVIKGLLPDVVAYTALID 481
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G + A L +M G+ P+ T + L+
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLI 515
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 198/449 (44%), Gaps = 63/449 (14%)
Query: 93 LTNRVGD-GFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTF 150
LT R + +L H + R + N +Y+ +IH L +AR LM D+ + +
Sbjct: 45 LTCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSR 104
Query: 151 SILICAYCKEENLVNAL-----------VLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
IC C N+++ L VL+ G V + + + +++L ++
Sbjct: 105 RSRIC--CSVFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACN 162
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
++ L + G + KV G +M +G PNV TY LI C G A +F
Sbjct: 163 MVLDGLVKKGRFDTMWKVYG------DMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M I V Y LIRGLC RI + + + M +S G + YN+++ G
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNS--GMLPNLYTYNTMMDGYC 274
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +ALE ++M + L P V + I G C + A++ M G VPN+
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 378 IYDCLIHAYCQE-----------------------------------ERVREASELMKEM 402
+Y+CLI YC+ +R+ EA L++EM
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G+LP A T+NT++ G C++GN+ A+++ + +G P +S LI C+
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTE---KGIEPNIITFSTLIDGYCKA 451
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G ++A L +MV KG+LPD + + +L+
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 156/333 (46%), Gaps = 26/333 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P I+ +IRGL I++ + M P+L +N+++D K + A
Sbjct: 226 PTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALEL 285
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++M+ G+ + T+ IL+ GLC T+ + K L M S GV PN +YN LI C
Sbjct: 286 Y-QEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A SL S++E+ P+ T+SILI C + + A LL++ GF+P+ V
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ C G + A+E+ + E+G + GK++ EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG LP+V Y LI + + G A + +M+ G+ N T LI GLC GRI
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
D +K+ +K G+ S N + LY+
Sbjct: 525 SDAIKLFL----AKTGTDTTGSKTNELDRSLYQ 553
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 125/308 (40%), Gaps = 28/308 (9%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+R + + D ++ +K L + + +G ++ ++ + G +P + +LI
Sbjct: 617 FFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMY 676
Query: 127 CKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
G V A ++ ++ N ++++ +I AY + AL L + PD+VT+T
Sbjct: 677 SATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVT 736
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
L +G +D E + + +G ++ N LI+ Y
Sbjct: 737 VALSACADLG-ALDMGEWIHAY------------------IRHRGLDTDLCLNNSLINMY 777
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ G + +A + + N VT+ ++ G +++G + + M++ +
Sbjct: 778 SKCGEIGTA------RRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDY-SLRP 830
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
RIS + ++ L R EA E++ +M V R+L LG C + D K
Sbjct: 831 RISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTL--LGACSLQGMWDKKMLVRN 888
Query: 367 MIEEGGVP 374
I++ P
Sbjct: 889 QIKQRRDP 896
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 201/413 (48%), Gaps = 30/413 (7%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
++++ G C + RV +LL M GVK N++ YN+L+ + + R ++ ME
Sbjct: 147 SVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMEN 206
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
EP T++IL+ ++ + E+ S DV + V+ C G V
Sbjct: 207 EGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRR 266
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A E+ +E +G G PN TY LI+ +C+ G +++A +
Sbjct: 267 ASEVFDEC-----VG--------------NGIEPNEHTYGALINGFCKIGQMEAAEMLVT 307
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DM++ G+ N + ++T+I G C +D L+I +ME K G + + YN++ GL R
Sbjct: 308 DMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIME--KMGIELDVYTYNTLACGLRR 365
Query: 321 ENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
N+ DEA L+ M EK + P V + I C +G++ +A+R F +M G P++V
Sbjct: 366 ANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 425
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ ++ Y ++ +REA EM G +P ++ ++ G C G V AL+L EE
Sbjct: 426 YNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMK 485
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ RGS P Y+ LI L ++G + A L M+G G+ PD +++L+
Sbjct: 486 Q---RGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALV 535
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 190/426 (44%), Gaps = 31/426 (7%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P S+ +P S+ V+ G ++ + + D + R + + +NS+LD +E
Sbjct: 138 PDSV-TPLSASV---VVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKD 193
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A K M G++ TY IL+ GL + + MKS+ + + Y++
Sbjct: 194 DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSS 253
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I++ C+ G V RA + + EPN+ T+ LI +CK + A +L+ G
Sbjct: 254 VINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRG 313
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ + +++ C V A+EI + + ME+ G +V
Sbjct: 314 VGINQIVFNTMIDGYCRKNMVDKALEI-----------------KMI--MEKMGIELDVY 354
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN L +D A ++ M G+ N V+Y TLI C+ G + + ++ + M
Sbjct: 355 TYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREM 414
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ G++ + YN ++ G ++ EA + +MEK L P + + G CV+G
Sbjct: 415 --AGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNG 472
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A R F++M + G PN+V Y LI +E R EA +L M G G P + ++
Sbjct: 473 KVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYS 532
Query: 416 TVLSGL 421
++ L
Sbjct: 533 ALVGSL 538
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 205/430 (47%), Gaps = 32/430 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLC 127
++M G + ++Y IL+KGLC NR + +LL +M G P+ V Y T+I+
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +A +M + PN VT+S +I A CK + + A+ +L G +P+
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ CS G+ +A+ FLK+M G P+V TYN L+
Sbjct: 271 TYNSIVHGYCSSGQPKEAIG-------------------FLKKMHSDGVEPDVVTYNSLM 311
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G A +F+ M G+ TY TL++G + G + + +L LM + G
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRNG 369
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
++ ++ ++ + D+A+ +M + L P V I C G VEDA
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R F+QMI+E P ++Y+ LIH+ C ++ +A EL+ EM G FN+++
Sbjct: 430 RYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSH 489
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++G V + KL + +R G P YS LI C G A+ LL MV G+
Sbjct: 490 CKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546
Query: 482 PDYLTWNSLL 491
PD +T+N+L+
Sbjct: 547 PDCVTYNTLI 556
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 211/438 (48%), Gaps = 32/438 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + T+++G + ++ DL+ R + P+ +F+ ++ K+ +D A
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D TY ++ LC + RV D + M + P +++YN+LIHSLC
Sbjct: 397 F-SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A+ L+ +M + + + F+ +I ++CKE ++ + L + G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G++ +A + L M G P+ TYN LI
Sbjct: 516 TYSTLIDGYCLAGKMDEAT-------------------KLLASMVSVGMKPDCVTYNTLI 556
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+ ++ AL +F +M+ G+S + +TY+ +++GL R ++ + +S G
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITES--G 614
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
++ +S YN +L+GL + N DEAL + + + R+ I+ G ++AK
Sbjct: 615 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAK 674
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + G VP+V Y + ++ + E +L M +G + N+++ L
Sbjct: 675 DLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKL 734
Query: 422 CRQGNV---GTALKLVEE 436
++G++ GT L +++E
Sbjct: 735 LQRGDITRAGTYLFMIDE 752
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 171/382 (44%), Gaps = 26/382 (6%)
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+D PN T+ ILI + C L L GF D + T +L+ LC+ R
Sbjct: 84 ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143
Query: 200 DAVEI-LEESGEQGRLGKV-------KGGC---------RFLKEMERKG--CLPNVDTYN 240
DA++I L + G + V KG C L+ M G C P+V +Y
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+I+ + + G LD A +++M GI N VTY ++I LC +D +++L M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSM--V 261
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
K G YNS+++G Q EA+ +LK+M + + P V + + C +G
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A++ FD M + G P + Y L+ Y + + E L+ M +G P F+ ++
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+QG V A+ LV MR +G P + Y +I LC+ G + A QM+ +
Sbjct: 382 CAYAKQGKVDQAM-LVFSKMR--QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
+ P + +NSL+ L W
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKW 460
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 243/502 (48%), Gaps = 54/502 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLV--KEDIDL 63
DE + ++VI+ G+ M + +A D+ R F P+++ +N++L+ V K+ + +
Sbjct: 77 DEDVALSVIKTYGKNSMPD---QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
F +GV + TY +L+K C L M G KP+ Y+T+I
Sbjct: 134 ESLF--AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ L K GK+ A L +M E P+ ++ILI + KE++ A+ L ++ V
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 180 -PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+V T ++ L GRV D ++I E +K+ ER+ ++ T
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWER----------------MKQNERE---KDLYT 292
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y+ LI C+ G +D A VFN++ S + VTY+T++ G C G+I + L++ ++ME
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR---AVDRS---LKILGFC 352
+ I YN ++ GL + DEA + +L P A D++ + I G C
Sbjct: 353 HKNSVN---IVSYNILIKGLLENGKIDEA----TMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
V+G V A ++ GG +V Y +I C+++R+ EAS L+KEM+ HG +
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASML 471
N ++ GL R +G A +R +G+ G P Y+ LI LC+ G F AS
Sbjct: 466 VCNALIGGLIRDSRLGEASFF----LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAF 521
Query: 472 LVQMVGKGILPDYLTWNSLLIC 493
+ +M+ G PD T+ S+L+C
Sbjct: 522 VKEMLENGWKPDLKTY-SILLC 542
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 221/505 (43%), Gaps = 27/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + TVI L +A ++D ++ D +S + P + +N ++D +KE D A
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + S V + T+ I++ GL RV D K+ MK + + Y++LIH LC
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 128 KNGKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNALVL---LEKSFSFGFVP 180
G V +A S+ ++++E VT++ ++ +C+ + +L L +E S V
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS 361
Query: 181 DVVTITKVLE-----LLCSVGRVMDAVEILEESGEQGRL-------GKVKGGCRFLKEME 228
+ I +LE + R+M A + G G V ++E+E
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +V Y +I C+ L+ A ++ +M G+ N + LI GL R+
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ L+ M K G + + YN ++ GL + + EA ++K+M P S+
Sbjct: 482 EASFFLREM--GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C D ++ A + Q ++ G +V++++ LIH C ++ +A +M M
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
T+NT++ G + G+ A ++ M +G P Y+ ++K LC G
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRA-TVIWGYMYKMGLQ--PDIISYNTIMKGLCMCRGVS 656
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A GI P TWN L+
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILV 681
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 57 VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
+KE ++L R K + + +Y IL+KGL ++ + + +M ++G +
Sbjct: 341 IKESLELWRIMEHKNSV------NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEK 172
Y IH LC NG V +A +M ++E DV ++ +I CK++ L A L+++
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGK 216
G + ++ L R+ +A L E G+ G + GK
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
F+KEM G P++ TY+IL+ C +D AL++++ G+ + + ++
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
LI GLCS G++DD + ++ ME + YN+++ G ++ + A M K
Sbjct: 575 LIHGLCSVGKLDDAMTVMANME--HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
L P + + + G C+ V A FD G P V ++ L+ A
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 111/275 (40%), Gaps = 58/275 (21%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + ++I L + + + + +S+ + + + N+++ L+++ +F+
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP--------------- 114
++M +G + +Y IL+ GLC + G+ + M G KP
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 115 --------------------NSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
+ +++N LIH LC GK+ A ++M++ME N VT+
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ + K + A V+ + G PD+++ +++ LC V A+E
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME------- 660
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
F + G P V T+NIL+ +
Sbjct: 661 ------------FFDDARNHGIFPTVYTWNILVRA 683
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 230/507 (45%), Gaps = 42/507 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P + F ++ A + V+A + F+ P+ ++N++ VLV I LA A
Sbjct: 141 PAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALA 200
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
Y +M++SG + TY +LM GLC D K+ M RG+ P+ IY L+ SL
Sbjct: 201 LY-NRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSL 259
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C G++ A L+ M+E P++VT+++ + CK + A E GF +
Sbjct: 260 CNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGL 319
Query: 183 VTITKVLELLCSVGRVMDAV----EILEESGEQ------------GRLGKVKGGCRFLKE 226
+ + +++ L GR + + E+L +S G+ K L E
Sbjct: 320 IGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDE 379
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M+ KG +P+ YN L+ + + G +D A + ++M + + + T++ +I GLC G
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-----KLFPRA 341
ID +++ E + G + YN+++ GLYR +EA +ME LF R
Sbjct: 440 IDKAMQVFD--EMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRL 497
Query: 342 V--------DRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
SL+ L G C G V A + +IE G VP+VV Y+ LI+ C+ +
Sbjct: 498 TLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKN 557
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ A L KE+ G P T+ T++ GL R A L + +R G SLP
Sbjct: 558 LDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLP---I 614
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGK 478
Y+ ++++LC A L + + K
Sbjct: 615 YNTMMRSLCRMKKLSQAINLWLDYLPK 641
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 188/471 (39%), Gaps = 76/471 (16%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A+G+ + L+ R + + M +P + +YN + L G +
Sbjct: 137 AAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVIL 196
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A +L + M PN T+ +L+ CK V+AL + ++ G VPDV T +L
Sbjct: 197 LALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLL 256
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
LC+ GR+ DA GRL L M+ GC P+ TY + +S C+
Sbjct: 257 SSLCNEGRIEDA----------GRL---------LCSMKENGCPPDEVTYTVFLSGLCKA 297
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK----------------- 292
G +D A F ++ G + + Y LI GL GR D+GL
Sbjct: 298 GRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLY 357
Query: 293 ----------------ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
L L E +G YN++L L+ D A + +M
Sbjct: 358 TILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQ 417
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ + ++ I G C G ++ A + FD+M E G P V+ Y+ LI + + E
Sbjct: 418 NNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEE 477
Query: 395 ASELMKEMT-------------GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
A L +M G + + ++ G+C+ G V A KL +RGI
Sbjct: 478 ARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKL----LRGI 533
Query: 442 -GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G +P Y+ LI LC+ A L ++ KGI PD +T+ +L+
Sbjct: 534 IESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 213/490 (43%), Gaps = 81/490 (16%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PPDE + + GL +A +++ +L+ T L ++ ++D L + D +
Sbjct: 281 PPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLS 340
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+Y +M+ + D Y IL++ R D F LL MK +G P++ YNTL+ +L
Sbjct: 341 YY-TEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKAL 399
Query: 127 CKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G + RA+SLMS+M + N V T +I+IC CK+ + A+ + ++ G P V
Sbjct: 400 FDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTV 459
Query: 183 VTITKVLELLCSVGRVMDAVEILE--ESGEQGRL-------------------------- 214
+T +++ L G + +A + E G L
Sbjct: 460 MTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQ 519
Query: 215 -GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
G+V + L+ + G +P+V TYN LI+ C+ LD AL +F ++++ GIS + +T
Sbjct: 520 SGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEIT 579
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA----LE 329
Y TLI GL R +D + Q + + G + YN+++ L R + +A L+
Sbjct: 580 YGTLIDGLWRAHRENDATMLFQNI--LRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLD 637
Query: 330 YLKQMEKLFPRA--------------VDRSLK--------------------ILGFCVDG 355
YL + L P +D ++K ++G C
Sbjct: 638 YLPKKYNLSPEDEVIANARKCFEDGFLDETVKELIKIDQVYGSLNPNPYTIWVIGLCQVR 697
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDC---LIHAYCQEERVREASELMKEMTGHGYLPIAS 412
++DA R F ++EE G+ VV C LI+ C + + A ++M ++
Sbjct: 698 KIDDALRIF-HILEEFGI--VVTPACCALLINYLCWDRNLNAAVDIMMYTLSKRFIVSQP 754
Query: 413 TFNTVLSGLC 422
N +L LC
Sbjct: 755 VGNRLLRSLC 764
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 107/275 (38%), Gaps = 36/275 (13%)
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+ D D + G+ + L+ S GR + ++ M D + YN+
Sbjct: 127 AMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFV--YNA 184
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
V L AL +M P + + + G C G DA + FD+M+E G
Sbjct: 185 VFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERG 244
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
VP+V IY L+ + C E R+ +A L+ M +G P T+ LSGLC+ G V A
Sbjct: 245 IVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAF 304
Query: 432 KLVEEDMRG--------------------------------IGRGSLPGSGHYSPLIKAL 459
E G +G+ P Y+ LI+
Sbjct: 305 HRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRF 364
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
E G + A +LL +M KG +PD +N+LL L
Sbjct: 365 AEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKAL 399
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 359 DAKRCFDQMIEE--GGVPN-VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
DA FD + + G+P + L+ A+ R +EA E M P A +N
Sbjct: 124 DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYN 183
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
V L +G + AL L R + G LP S Y L+ LC++G A + +M
Sbjct: 184 AVFQVLVDRGVILLALALYN---RMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEM 240
Query: 476 VGKGILPDYLTWNSLLICLSQQ 497
+ +GI+PD + LL L +
Sbjct: 241 LERGIVPDVKIYTVLLSSLCNE 262
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 234/497 (47%), Gaps = 58/497 (11%)
Query: 43 TPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
P ++N +L ++ED +DL A Y K ++ +G D +T L++ L R+
Sbjct: 105 APPTPVYNRLLLAALREDRLDLVEALY-KDLLLAGATPDVFTRNALLEALSAAGRMDLAR 163
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEE 161
++ M +R N L C+ G+ A +++ M E N V + ++ +C+E
Sbjct: 164 RVFDAMPAR----NEFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREG 219
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI---LEESGEQGRLGKVK 218
+ A L+++ + G P+VVT + LC GRV++A I ++E+ EQG
Sbjct: 220 RVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQG------ 273
Query: 219 GGCRFLKEMERKGCLPNVD--TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
LP D T+++++S +C+ G++D A + + M+ G +Y+
Sbjct: 274 --------------LPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNR 319
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--LEYLKQM 334
+ GL GR+ + ++L M + EG + YN ++ GL +E + + +E +
Sbjct: 320 WLSGLVKNGRVGEAQELLSEM--AHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRS 377
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ P V + + +C GN A R D+M ++G PN+ Y+ L+ + + R E
Sbjct: 378 GVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTE 437
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-------DMRGIG----- 442
L++ M+ GY ++ N ++ GLCR + A+ +V+ +R +G
Sbjct: 438 VERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVS 497
Query: 443 --------RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--I 492
+ LP YS L+ ALC++G F A LV+M+GK I PD + +++ +
Sbjct: 498 LVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGY 557
Query: 493 CLSQQTTWLLLLLLNEM 509
C+ +T+ L + +L +M
Sbjct: 558 CMHGKTS-LAIKVLRDM 573
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 210/455 (46%), Gaps = 56/455 (12%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ G C RV + +L+ M+++G+ PN V +N I +LCK G+V A + +DM+E
Sbjct: 211 VVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAW 270
Query: 145 ------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
P+ VTF +++ +C + A VL++ GF+ V + + L L GRV
Sbjct: 271 EQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRV 330
Query: 199 MDAVEILEESGEQGRLGK-------VKGGC--------RFLKEMERKGCL-PNVDTYNIL 242
+A E+L E +G V G C R +++ R G + P+V TY L
Sbjct: 331 GEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSL 390
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ +YC G +A + ++M G + N TY+ L++ L GR + ++L+ M S++
Sbjct: 391 LHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERM--SEK 448
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-------------------------EKL 337
G + N ++ GL R ++ + A++ + M +
Sbjct: 449 GYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSC 508
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + S + C +G ++AK+ +MI + P+ VIYD IH YC + A +
Sbjct: 509 LPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIK 568
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLI 456
++++M P ++N ++ G + LKL+ E +GI + Y+ LI
Sbjct: 569 VLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMT----YNSLI 624
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K+ C +G A LL +M+ I+P+ ++ L+
Sbjct: 625 KSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLI 659
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 226/504 (44%), Gaps = 28/504 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD+ F ++ G A M+++ D++ ++ +N L LVK
Sbjct: 277 PDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQEL 336
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M GVQ + YTY I++ GLC + D ++ ++S + P+ V Y +L+H+ C
Sbjct: 337 LSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCS 396
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G A ++ +M + PN T+++L+ + K LLE+ G+ D +
Sbjct: 397 KGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTAS 456
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME----RKGCLPNVDTYN 240
+++ LC ++ A++I++ +GRL + G F+ + K CLP+ TY+
Sbjct: 457 CNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYS 516
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+++ C+ G D A +M IS + V YDT I G C G+ +K+L+ ME
Sbjct: 517 TLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDME-- 574
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
K YN +++G + + DE L+ + +M++ + + + I FC G V
Sbjct: 575 KRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVN 634
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK-EMTGHG-----YLPIAS 412
A D+M++ VPNV + LI A+C+ A + ++ G Y + +
Sbjct: 635 KAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCT 694
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+T + + + TAL +MR I S P Y +I LC+ A LL
Sbjct: 695 ELSTYARWIEAKNILETAL-----EMR-ISIQSFP----YKRIIAGLCDVSEADHAHSLL 744
Query: 473 VQMVGKGILPDYLTWNSLLICLSQ 496
+ KG D T+ ++ LS+
Sbjct: 745 KLFIAKGYSFDPATFMPVIDALSE 768
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 216/455 (47%), Gaps = 32/455 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+++ NS+L + +K + A +M ++ YT+ I++ LC ++
Sbjct: 184 PTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 243
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ M++ GVKPN V YNT++H C +G+V A ++++ M+ EP+ T+ LI CK
Sbjct: 244 VGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCK 303
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ L A + E+ G P V +++ C+ G + A
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMA------------------ 345
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ EM +KG P + TYN LI + D A + +++ GIS + +TY+ LI
Sbjct: 346 -SAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILIN 404
Query: 280 GLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G C R + K L ++ G K Y S+L+ L ++N+ EA + K++ E
Sbjct: 405 GYC---RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + + I G C + NV+ A M P+ V ++ ++ +C+E +V EA
Sbjct: 462 VLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEAR 521
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
EL EM G P +FNT++SG R+G++ A ++ E + G P Y+ L+
Sbjct: 522 ELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNE---MLDTGFNPTVLTYNALV 578
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ LC+ A LL +MV KG+ PD T+ +L+
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLI 613
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 202/415 (48%), Gaps = 32/415 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ L+K C NR + F+ + MK +GV P N+L+ K + A L ++M
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ + TF+I+I CKE L A + + G P++VT ++ CS GRV
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A IL M+R+ P+ TY LIS C+ G L+ A +F
Sbjct: 274 AADAIL-------------------TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIF 314
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+M G+ + V Y+TLI G C+ G +D M K+G +S YNS+++ L+
Sbjct: 315 EEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEM--LKKGISPTMSTYNSLIHALF 372
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
E + DEA +K++++ + P A+ ++ I G+C N + A D+M+ G P
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKK 432
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y L+H ++ R++EA +L K++T G LP FN ++ G C NV A +L
Sbjct: 433 TYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFEL---- 488
Query: 438 MRGIGRGSLPGSG-HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ + R +P ++ +++ C +G + A L +M +GI PD++++N+L+
Sbjct: 489 LKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 65/404 (16%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSIL 153
TN + + F+ L + R +S++++ LI S C + A
Sbjct: 129 TNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEA-----------------F 171
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
C Y +E G +P + T +L L +
Sbjct: 172 ECFYTMKEK--------------GVLPTIETCNSLLSLFL-------------------K 198
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
L + + EM R +V T+NI+I+ C+ G L A D M+ G+ N VT
Sbjct: 199 LNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT 258
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALE 329
Y+T++ G CS GR++ IL M+ + +I P Y S++ G+ ++ + +EA +
Sbjct: 259 YNTIVHGYCSSGRVEAADAILTTMK------RQKIEPDSFTYGSLISGMCKQGRLEEASK 312
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M + L P AV + I GFC GN++ A D+M+++G P + Y+ LIHA
Sbjct: 313 IFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALF 372
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
E+R EA ++KE+ G P A T+N +++G CR N A L+ ++M + G P
Sbjct: 373 MEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAF-LLHDEM--LASGIKP 429
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ L+ L +K + A L ++ +G+LPD + +N+L+
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI 473
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 7/225 (3%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+ +D LI+ C R D+ + M++ +G I NS+L + N+ + A
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKE--KGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 332 KQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M +L ++ + I+ C +G ++ AK M G PN+V Y+ ++H YC
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
RV A ++ M P + T+ +++SG+C+QG + A K+ EE + +G P +
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEE---MVQKGLRPSA 326
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
Y+ LI C KG AS +M+ KGI P T+NSL+ L
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHAL 371
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 23/249 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G R D + + P+ K + S+L VL K++
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KK+ + GV D + L+ G C + V F+LL M V P+ V +NT++ C+
Sbjct: 454 FKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCR 513
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV AR L +M+ +P+ ++F+ LI Y + ++ +A + + GF P V+T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC ++G L + LKEM KG P+ TY LI
Sbjct: 574 YNALVQGLCK--------------NQEGDLAE-----ELLKEMVSKGMTPDDTTYFTLIE 614
Query: 245 SYCETGVLD 253
+ + D
Sbjct: 615 GIAKVNIPD 623
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 228/467 (48%), Gaps = 28/467 (5%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
++ +L VL K + + M+ G+ +A +M ++ + ++L +M
Sbjct: 138 VYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMM 197
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
+ GV+PN +I NT IH L K+ +A + M+ PN VT++ LI YC +
Sbjct: 198 QKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQV 257
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--------- 214
+A+ L+ + G PD V+ V+ LC R+ + ++E+ + +L
Sbjct: 258 EHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNT 317
Query: 215 --------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
G FL+E E +G + Y+ +++S+C G +D A ++ N+M G
Sbjct: 318 LVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKG 377
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
S + VTY ++ GLC G++++ K+LQ M K G K Y ++L GL + E
Sbjct: 378 CSPDVVTYTAVVNGLCKVGKVEEAKKMLQQM--YKHGCKPNTVSYTALLNGLCQHGNSLE 435
Query: 327 ALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A E + E+ + P A+ S+ + G +G + +A +M+ +G P V + LI
Sbjct: 436 AREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIK 495
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+ C E+++ EA + M+E G A F TV+ G C+ N+ TAL L+ +DM +
Sbjct: 496 SLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLL-DDMYLNNKH 554
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + ++ +I AL +KG + A++ ++M+ KG+ P +T+ +++
Sbjct: 555 --PDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVI 599
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 225/483 (46%), Gaps = 40/483 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKM 72
F V+ RA + + ++ ++ + + P+L I N+ + VLV + L +A + ++M
Sbjct: 174 FAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMAN-KLEKALRFLERM 232
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ + TY L+KG C +V +L+ M +G P+ V Y T++ LC++ ++
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRI 292
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R+LM M + P+ VT++ L+ K + AL L ++ GF D V +
Sbjct: 293 KEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSA 352
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C GR+ A EI+ E +G ++GKV+ + L++M + G
Sbjct: 353 IVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHG 412
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PN +Y L++ C+ G A ++ N + D + N +TY ++ GL G++ +
Sbjct: 413 CKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEAC 472
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR-----AVDRSL 346
+++ M +G N ++ L E + +EA ++ ME+ R AV+ +
Sbjct: 473 DVVREM--LTKGFFPTPVEINLLIKSLCLEQKMNEAKKF---MEECLNRGCAVNAVNFTT 527
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I GFC N++ A D M P+ V + +I A ++ R+ EA+ +M G
Sbjct: 528 VIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKG 587
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+ V+ C+ G V +KL+ + + R R + Y+ +I+ LC G
Sbjct: 588 LDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCRTA------YNQVIEKLCNFGNP 641
Query: 466 QSA 468
++A
Sbjct: 642 EAA 644
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 180/356 (50%), Gaps = 33/356 (9%)
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
F+ ++ +Y + L NA+ +L G P++ L+C+ A+ +L +
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNL--------LICNT-----AIHVLVMA 219
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
K++ RFL+ M+ G PNV TYN LI YC+ ++ A+++ +M G
Sbjct: 220 N------KLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCP 273
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ V+Y T++ LC RI + +++ M + +++ YN++++ L + DEAL
Sbjct: 274 PDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVT-YNTLVHMLSKHGHADEAL 332
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E+L++ E+ V S + FC+ G ++ AK ++MI +G P+VV Y +++
Sbjct: 333 EFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGL 392
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---EEDMRGIGR 443
C+ +V EA +++++M HG P ++ +L+GLC+ GN A +++ EED
Sbjct: 393 CKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDW----- 447
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
P + YS ++ L +G A ++ +M+ KG P + N L+ +CL Q+
Sbjct: 448 -WTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQK 502
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 207/432 (47%), Gaps = 44/432 (10%)
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
M SG Q + T + L+KG+C +V D +L M G + + ++Y LI++L K +
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 133 GRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
RA R ++S++ N T+ ++I + CK+ + L + + + G P+V+ + +
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC VG++ +AV + + EM +G NV TYN LI + C
Sbjct: 121 INGLCRVGKLREAVNLFD-------------------EMVSQGIKANVITYNSLIHASCR 161
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G+ A F+ M +GI + VT+ TLI L G++ + KI +LM K+G I
Sbjct: 162 FGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELM--IKQGEAPNI 219
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK---------ILGFCVDGNVED 359
YNS+L GL +Q D A+ +LF V+R +K I G+C G E+
Sbjct: 220 VTYNSLLNGLCLHHQMDHAV-------RLFEVMVERGIKIDVISYNTLINGYCTSGKTEE 272
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F +M E P++ Y L+ A Q R+R A EL M G P T+ +L
Sbjct: 273 AMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLD 332
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLC+ G + A+ V ++ I P YS LI + + ++SA + ++ G
Sbjct: 333 GLCKNGCIEEAID-VFRSLKSIKYK--PSIRIYSILIGGMFQARRWESAMEIFDEIPTVG 389
Query: 480 ILPDYLTWNSLL 491
++P+ +T+N ++
Sbjct: 390 LVPNIVTYNIMI 401
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 225/482 (46%), Gaps = 32/482 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ T+++G+ + D ++ D ++R + ++ +++ L K
Sbjct: 7 PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M++ G+ +TY +++ LC G K+ M + G+ PN ++Y++LI+ LC+
Sbjct: 67 HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A +L +M + N +T++ LI A C+ A + G +PDVVT
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ L G+V +A +I E M ++G PN+ TYN L++
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFEL-------------------MIKQGEAPNIVTYNSLLN 227
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C +D A+ +F M GI + ++Y+TLI G C+ G+ ++ + + + M+ E
Sbjct: 228 GLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ--YEEL 285
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
I+ Y +L LY+ + A E M+ P ++ + G C +G +E+A
Sbjct: 286 TPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAID 345
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + P++ IY LI Q R A E+ E+ G +P T+N +++GLC
Sbjct: 346 VFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLC 405
Query: 423 RQGNVGTALKL-VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
++G + A +L V+ + G + + ++ +I+ ++ Q A L +M K
Sbjct: 406 KEGKLLEAERLFVQMEESGCEQDEIS----FNFIIRGFLQENQVQKAMEFLKRMREKNFS 461
Query: 482 PD 483
P+
Sbjct: 462 PN 463
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 174/400 (43%), Gaps = 59/400 (14%)
Query: 52 ILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG 111
++D L K+ + + ++M+ G+ + Y+ L+ GLC ++ + L M S+G
Sbjct: 85 VIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQG 144
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNAL 167
+K N + YN+LIH+ C+ G A S M P+ VTF+ LI K+ + A
Sbjct: 145 IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAY 204
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------------- 212
+ E G P++VT +L LC ++ AV + E E+G
Sbjct: 205 KIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGY 264
Query: 213 -RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GK + ++M+ + P++ TY IL+ + + G + +A ++FN+M+I G S +
Sbjct: 265 CTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSL 324
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
TY L+ GLC G I++ + + + ++ K RI Y+ ++ G+++ + + A+E
Sbjct: 325 DTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI--YSILIGGMFQARRWESAMEIF 382
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDG---------------------------------- 355
++ L P V ++ I G C +G
Sbjct: 383 DEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQE 442
Query: 356 -NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
V+ A +M E+ PN + L++ Y + + E
Sbjct: 443 NQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSE 482
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 59/331 (17%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G+ P++VT++ +++ +C G+VMDA+E+ ++ M R G ++
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDK-------------------MTRSGFQGDI 44
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
Y LI++ +T A+++ M + S NF TY +I LC G GLK+ +
Sbjct: 45 LLYGYLINALRKTRQARRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFRE 104
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGN 356
M + + P + S I G C G
Sbjct: 105 MINMG-----------------------------------ICPNVIVYSSLINGLCRVGK 129
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ +A FD+M+ +G NV+ Y+ LIHA C+ +EA+ +M G G LP TF T
Sbjct: 130 LREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTT 189
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ L ++G V A K+ E I +G P Y+ L+ LC A L MV
Sbjct: 190 LIDHLSKKGKVQEAYKIFE---LMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246
Query: 477 GKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
+GI D +++N+L+ C S +T + L
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLF 277
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--I 61
SI+ P I+ +I G+ +AR ++ D + + P++ +N +++ L KE +
Sbjct: 352 SIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLL 411
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ R F +M SG + D+ ++ +++G N+V + L M+ + PN +
Sbjct: 412 EAERLFV--QMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLM 469
Query: 122 LIH 124
L++
Sbjct: 470 LVN 472
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 243/521 (46%), Gaps = 69/521 (13%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKM 72
F+ V+ RA + D +K L+ R + P+L I N+ +DV V+ + L +A + ++M
Sbjct: 248 FLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRAN-RLEKALRFLERM 306
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ + TY +++G C +RV + +LL M S+G P+ V Y T++ LCK ++
Sbjct: 307 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRI 366
Query: 133 GRARSLMSDMEEP-----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R LM M + + VT++ LI K ++ AL L+ + GF D V +
Sbjct: 367 VEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSA 426
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ LC GR+ +A +++ E +G C P+V TY +++ +C
Sbjct: 427 IVHALCKEGRMSEAKDLINEMLSKGH------------------CPPDVVTYTAVVNGFC 468
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G +D A + M G N V+Y L+ GLC G+ + +++ + E+ + S
Sbjct: 469 RLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEE-QWWSPNS 527
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
I+ Y+ +++GL +E + EA + +++M + FP V+ +L + C DG +A++ +
Sbjct: 528 IT-YSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFME 586
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEE----------------------------------- 390
+ + +G NVV + +IH +CQ +
Sbjct: 587 ECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKG 646
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ EA+ELMK+M G P T+ TV+ C+ V + ++E+ + ++
Sbjct: 647 RIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMILRQKCKTI---- 702
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +I+ LC G + A LL +++ D T +L+
Sbjct: 703 -YNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALM 742
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 223/529 (42%), Gaps = 48/529 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
V+R R+ D R+ P ++ S+L+VL K + M
Sbjct: 182 AVLRSQDDERVALKFFYWADRQWRYRHDPM--VYYSMLEVLSKTKMCQGARRVLVLMKRR 239
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ + +M ++ D K+L +M+ GV+PN +I NT I + ++ +A
Sbjct: 240 GIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKA 299
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ M+ PN VT++ +I YC + A+ LL+ S G +PD V+ ++
Sbjct: 300 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGY 359
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC R+++ +++++ ++ G + + TYN LI +
Sbjct: 360 LCKEKRIVEVRDLMKKMAKE------------------HGLVRDQVTYNTLIHMLTKHDH 401
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP- 310
D AL D + G + V Y ++ LC GR+ + ++ M SKG P
Sbjct: 402 ADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML-----SKGHCPPD 456
Query: 311 ---YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y +V+ G R + D+A + L+ M P V + + G C G +A+ +
Sbjct: 457 VVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMN 516
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
E+ PN + Y L+H +E ++ EA ++++EM G+ P N +L LCR G
Sbjct: 517 MSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 576
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A K +EE + +G +++ +I C+ +A +L M D
Sbjct: 577 RTHEARKFMEE---CLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVF 633
Query: 486 TWNSLLICLSQ-----QTTWLLLLLLNE-----MVSFVMVVHELSAKEK 524
T+ +L+ L + + T L+ +L++ V++ V+H EK
Sbjct: 634 TYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEK 682
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 239/510 (46%), Gaps = 44/510 (8%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLV 57
H +++ P SI F ++ L ++ N A L R +TP + FN +L+
Sbjct: 56 HLLRTKPTSSIIEFNKILGSLVKSNN-NHYPTAISLSRRLEFHGITPDIFTFN----ILI 110
Query: 58 KEDIDLARAFYRKKMMAS----GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK 113
+A + MMA G + D T+ L+KGLCL +V + + + G
Sbjct: 111 NCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFH 170
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVL 169
+ Y TLI+ LCK G+ A ++ ++ + N V ++ +I + CK + +++A L
Sbjct: 171 LDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYEL 230
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
+ + PDVVT + ++ C VG++ +A + +EM
Sbjct: 231 YSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLF-------------------REMVL 271
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K P+ T+NIL+ + C+ G L A ++ M +G+ N VTY +L+ G C +++
Sbjct: 272 KNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNK 331
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLK 347
+L + S+ G+ Y +++ G + DEAL M+ + P V +
Sbjct: 332 AKHVLNTI--SQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C G + A D+M + G N+ Y+CLI A C+ V +A L+K++ G
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P TFN ++ GLC+ G + A + V +D+ + +G + Y+ ++ LC++G F
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNA-QDVFQDL--LSKGYSVNAWTYNIMVNGLCKEGLFDE 506
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A LL +M GI+PD +T+ +L+ L +
Sbjct: 507 AEALLSKMDDNGIIPDAVTYETLIQALFHK 536
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 209/455 (45%), Gaps = 34/455 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD F +I +N + + P FN+++ L VKE +
Sbjct: 101 PDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALH- 159
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ ++A G D ++Y L+ GLC ++L + + VK N V+YNT+I
Sbjct: 160 ----FHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTII 215
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
SLCK+ V A L S M P+ VTFS LI +C L A L +
Sbjct: 216 DSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN 275
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RF 223
PD T +++ LC G + A +L ++G + V G C
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHV 335
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L + + G PN +Y +I+ +C+ ++D AL +FNDM+ GI+ + VTY++LI GLC
Sbjct: 336 LNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCK 395
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GRI +++ M D+ G I YN ++ L + + D+A+ +K++ + + P
Sbjct: 396 SGRISYAWELVDEMHDN--GQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDM 453
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
++ I G C G +++A+ F ++ +G N Y+ +++ C+E EA L+ +
Sbjct: 454 YTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSK 513
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
M +G +P A T+ T++ L + A KL+ E
Sbjct: 514 MDDNGIIPDAVTYETLIQALFHKDENEKAEKLLRE 548
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 141/309 (45%), Gaps = 20/309 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +I G + + + N+ P FN ++D L KE
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
MM GV + TY+ LM G CL N+V +L+ + G PN+ Y T+I+ CK
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
V A SL +DM+ P+ VT++ LI CK + A L+++ G ++ T
Sbjct: 361 IKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFT 420
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ LC V A+ ++++ +QG ++G++K +++
Sbjct: 421 YNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLL 480
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG N TYNI+++ C+ G+ D A + + M +GI + VTY+TLI+ L +
Sbjct: 481 SKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENE 540
Query: 289 DGLKILQLM 297
K+L+ M
Sbjct: 541 KAEKLLREM 549
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + I G C++G V++A D ++ G + Y LI+ C+ R A ++
Sbjct: 136 PDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQM 195
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++++ G +NT++ LC+ V A +L + I + P +S LI
Sbjct: 196 LRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQ---MIAKKISPDVVTFSALIYG 252
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-----LLLLLLNEMVSFV 513
C G + A L +MV K I PDY T+N L+ L ++ +L++++ E V
Sbjct: 253 FCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPN 312
Query: 514 MVVHELSAKEKRCKLRSLNHLAHGAGSV 541
+V + S + C + +N H ++
Sbjct: 313 VVTYS-SLMDGYCLVNQVNKAKHVLNTI 339
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/459 (30%), Positives = 208/459 (45%), Gaps = 38/459 (8%)
Query: 47 KIFNSILDVLVK-----EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
++ N L+ L+K + D A ++M G D ++Y L+KGLC+ + +
Sbjct: 126 RVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEAL 185
Query: 102 KLLHVMKSRG---VKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILI 154
+LL M + G PN V Y+T+I K G+V +A L +M P+ VT+S LI
Sbjct: 186 ELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
CK + + A +L+ F G +P+ T ++ CS+G++ +AV
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAV------------ 293
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
R LK+M G P+V TY +LI YC+ G A VF+ M G N Y
Sbjct: 294 -------RLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIY 346
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
L+ G + G + D +L LM ++G +N ++ + D+A+ +M
Sbjct: 347 HILLHGYATKGALIDVRDLLDLM--IRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404
Query: 335 EK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ L P V S I C G VEDA F+QM+ EG PN++ + LIH C
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
++ EL EM G P A NT++ LC++G V A DM I G P Y
Sbjct: 465 KKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF--DMV-IHIGVKPNVVSY 521
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ LI C G + +MV G+ PD T+N+LL
Sbjct: 522 NTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 228/504 (45%), Gaps = 37/504 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
+I+GL + +D A D+V R TP + +N+++ L E M
Sbjct: 135 LIKGLCDGKRTDD---AMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHM 191
Query: 73 MASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
A G + +Y+ ++ G V + L M +G P+ V Y++LI LCK
Sbjct: 192 TADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKA 251
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ +A +++ M + PN T++I+I YC L A+ LL+K G PDVVT
Sbjct: 252 QAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTY 311
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD-------- 237
+++ C +GR +A + + +G+ L KG L +V
Sbjct: 312 ILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR 371
Query: 238 --------TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+NILI +Y + G +D A+ F +M+ +G+ + V+Y T+I LC GR++D
Sbjct: 372 DGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVED 431
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYR--ENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ M EG I + S+++GL E ++ E L + + P A+ +
Sbjct: 432 AVYHFNQM--VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTI 489
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ C +G V +A+ FD +I G PNVV Y+ LI YC ++ E+ + M G
Sbjct: 490 MDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGL 549
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P + T+N +L+G + G V AL L E R + S + ++ L + G +
Sbjct: 550 RPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITS---NIILHGLFQAGRIVA 606
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L ++MV +G T+N++L
Sbjct: 607 ARELYMKMVDRGTQLRIETYNTVL 630
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 230/511 (45%), Gaps = 37/511 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
PPD + ++I GL +A+ +N + + P+ + +N ++ ++E +
Sbjct: 235 PPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVR 294
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L KKM SG+Q D TY +L++ C R + + M +G KPNS IY+ L
Sbjct: 295 LL-----KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHIL 349
Query: 123 IHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+H G + R L+ M F+ILICAY K + A+ + G
Sbjct: 350 LHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 409
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
PDVV+ + V+ +LC +GRV DAV + +G +G+ K
Sbjct: 410 RPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 469
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
EM +G P+ N ++ + C+ G + A D F+ + G+ N V+Y+TLI G C
Sbjct: 470 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC 529
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR-- 340
G++D+ +K M G + YN++L G ++ + ++AL ++M + +
Sbjct: 530 FVGKMDESIKQFDRM--VSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFC 587
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
A+ ++ + G G + A+ + +M++ G + Y+ ++ C+ V EA + +
Sbjct: 588 AITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFE 647
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ + TFN V++ L + G + A L + RG +P YS +IK+
Sbjct: 648 DLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSA---MVLRGPVPHVITYSLMIKSRI 704
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E+G + + L + M G D N ++
Sbjct: 705 EEGLLEESDDLFLSMEKNGCAADSHMLNVII 735
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 190/469 (40%), Gaps = 65/469 (13%)
Query: 45 SLKIFNSILDVLVKED--------IDLARAFYRKKMMASGVQ---GDDYTYAILMKGLCL 93
S+ FNS+L V+ + D LA + + M SGV + Y IL++ C
Sbjct: 48 SVHAFNSVLTVVARADSSSSPRHSAALAVSLF-NTMARSGVNMMAANRYIIGILIRCFCT 106
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSIL 153
R+ F + G + +V N LI LC + A +
Sbjct: 107 VGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDM--------------- 151
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
+ + G+ PDV + +++ LC + +A+E+L G
Sbjct: 152 ---------------VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGG 196
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
C PNV +Y+ +I + + G +D A +F++M G + VT
Sbjct: 197 YN----------------CSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVT 240
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y +LI GLC ++ ILQ M D +G YN ++ G Q +EA+ LK+
Sbjct: 241 YSSLIDGLCKAQAMNKAEAILQHMFD--KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKK 298
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M L P V L I +C G +A+ FD M+ +G PN IY L+H Y +
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGA 358
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ + +L+ M G FN ++ + G V A+ E MR G P
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE-MRQ--NGLRPDVVS 415
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
YS +I LC+ G + A QMV +G+ P+ +++ SL+ L W
Sbjct: 416 YSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 222/491 (45%), Gaps = 26/491 (5%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDY 82
R MI + + +SR ++ + FN I+D + L M+ G D
Sbjct: 506 REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 565
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L++GLC + + + + + + NTL+ +CK+G + A L M
Sbjct: 566 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 625
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
P+ T++IL+ +CK +V AL+LL+ G VPD + T +L L + G+V
Sbjct: 626 VTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQV 685
Query: 199 MDAVEILEESGEQGRL------------GKVKGGC-----RFLKEMERKGCLPNVDTYNI 241
A + +E + L G +KGG R ++ M P+ +YNI
Sbjct: 686 KAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNI 745
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ Y + G L L ++ DM +GI + VTY LI GLC G I+ +K L+ M +
Sbjct: 746 LMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEE 805
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
G + + + Y +++ R D A E + M+ L P V S + G C G VE+
Sbjct: 806 SGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEE 865
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F ++ G VP + + L+H C+E ++ +A L + M G T+N +++
Sbjct: 866 AIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLIT 925
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLC + + AL L EE M+ +G LP Y L A+ G Q LL + +G
Sbjct: 926 GLCNKKCICDALDLYEE-MK--SKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 982
Query: 480 ILPDYLTWNSL 490
I+P Y SL
Sbjct: 983 IVPSYKHPESL 993
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 222/526 (42%), Gaps = 46/526 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-------------V 55
PDE + T+I G IN + + + R ++ PS+ + +++D V
Sbjct: 332 PDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRV 391
Query: 56 LVKEDIDLARAFYRKK-------MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
L + I R K M+A G+ D TY+ L+ G+C + + ++L M+
Sbjct: 392 LYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
GV PN+V+Y TL+ CK G A D+ N V + L+C++ +E +
Sbjct: 452 KSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIA 511
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV------- 217
A + DV + +++ C G V++A + + G +
Sbjct: 512 EAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLL 571
Query: 218 KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+G C+ F+ + K C + T N L+ C+ G LD ALD+ M I
Sbjct: 572 RGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNIL 631
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ TY L+ G C G+I L +LQ+M + +G Y +L GL E Q A
Sbjct: 632 PDTYTYTILLDGFCKRGKIVPALILLQMMLE--KGLVPDTIAYTCLLNGLVNEGQVKAAS 689
Query: 329 EYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+++ E L+ + + + G+ G + + +R M E P+ Y+ L+H
Sbjct: 690 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 749
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
Y ++ ++ L ++M G P T+ ++ GLC G + A+K +E+ M G
Sbjct: 750 YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEK-MVLEESGL 808
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P HY LI A C G A L M G++P + +S++
Sbjct: 809 QPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIV 854
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/533 (23%), Positives = 224/533 (42%), Gaps = 87/533 (16%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+ +N+IL+ VK+ + M +G++ D YTY I++ LC R + L
Sbjct: 262 PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLL 321
Query: 104 LHVMKSRGVKPNSVIYNTLIHSL-----------------------------------CK 128
L M+ + P+ YNTLIH C+
Sbjct: 322 LKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCR 381
Query: 129 NGKVGRARSLMSDME------------------------EPNDVTFSILICAYCKEENLV 164
NG+ AR ++ +M+ +P+ +T+S LI CK +
Sbjct: 382 NGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIH 441
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------ 212
+L + G +P+ V T ++ C G +A++ + G
Sbjct: 442 ETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALL 501
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
R G + +F + M R +V ++N +I SYC+ G + A V+++M G
Sbjct: 502 CSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWP 561
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ TY +L+RGLC GG + + + L+E + + + N++L G+ + DEA
Sbjct: 562 PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTL---NTLLVGICKHGTLDEA 618
Query: 328 LEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
L+ ++M + P ++ + GFC G + A M+E+G VP+ + Y CL++
Sbjct: 619 LDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNG 678
Query: 386 YCQEERVREASELMKEMT-GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
E +V+ AS + +E+ G +N++++G + G + +E MR +
Sbjct: 679 LVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINE----IERLMRNMHEN 734
Query: 445 SL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ P S Y+ L+ +KG L MV +GI PD +T+ L+ L +
Sbjct: 735 EVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCE 787
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 128/512 (25%), Positives = 221/512 (43%), Gaps = 59/512 (11%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D A + SL N+IL+ LV + + K+ + D T I++
Sbjct: 178 DAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVL 237
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----E 144
LC ++ +L MK+ + PN+V YNT+++ K G+ A ++ DME E
Sbjct: 238 NSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIE 296
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+ T++I+I CK + A +LL++ PD + ++ G++ A+ I
Sbjct: 297 ADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYI 356
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ M R+ P+V TY LI YC G D A V +M+I
Sbjct: 357 FNQ-------------------MLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQI 397
Query: 265 --------------------DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
DGI + +TY LI G+C G I + +IL M+ K G
Sbjct: 398 TGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ--KSGV 455
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
Y ++++ + EAL+Y + + L +V + + F +G + +A++
Sbjct: 456 LPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQ 515
Query: 363 CFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F Q + + +V ++C+I +YCQ V EA + M HG+ P T+ ++L GL
Sbjct: 516 -FKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 574
Query: 422 CRQGNVGTALKLVE---EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C+ G++ A + + E I +L + L+ +C+ G A L +MV +
Sbjct: 575 CQGGHLVQAKEFMVYLLEKACAIDEKTL------NTLLVGICKHGTLDEALDLCEKMVTR 628
Query: 479 GILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
ILPD T+ LL ++ + L+L +M+
Sbjct: 629 NILPDTYTYTILLDGFCKRGKIVPALILLQMM 660
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 188/456 (41%), Gaps = 100/456 (21%)
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALV 168
SR N + L+++ K GKV A + + M+E S+ C N++NALV
Sbjct: 153 SRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECG-FKASLFSC-----NNILNALV 206
Query: 169 ----------LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
L++S F DV T VL LC+ G++ A +L+ K+K
Sbjct: 207 GINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQ---------KMK 257
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
CR LPN TYN +++ Y + G SAL + +DM+ +GI + TY+ +I
Sbjct: 258 N-CR----------LPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMI 306
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM 334
LC R +L+ M + ++P YN++++G + E + + A+ QM
Sbjct: 307 DKLCKLKRSARAYLLLKRMREVN------LTPDECSYNTLIHGFFGEGKINLAIYIFNQM 360
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ--------------------MIEEGG 372
+ L P + I G+C +G ++A+R + M+ +G
Sbjct: 361 LRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGI 420
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P+V+ Y LI+ C+ + E E++ M G LP + T++ C+ G+ ALK
Sbjct: 421 DPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALK 480
Query: 433 LVEEDMR-GIGRGSLPGS-------------------------------GHYSPLIKALC 460
+ R G+ S+ + ++ +I + C
Sbjct: 481 YFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYC 540
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
++G A + MV G PD T+ SLL L Q
Sbjct: 541 QRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQ 576
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P E +++RGL + + + + + R M P++ F +++ L KE + AF+
Sbjct: 845 PSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKE-FKIDDAFH 903
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K++M S G++ D TY +L+ GLC + D L MKS+G+ PN Y TL ++
Sbjct: 904 LKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMY 963
Query: 128 KNGKVGRARSLMSDMEE 144
G + L+ D+E+
Sbjct: 964 ATGTMQDGEKLLKDIED 980
>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
Length = 642
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 218/475 (45%), Gaps = 53/475 (11%)
Query: 44 PSLKIFNS-ILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P ++N IL L + +DL A Y K ++ +G Q D +T +L++ LC R+ +
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALY-KDLLLAGAQPDVFTRNLLLRALCDAGRMELAQR 166
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEEN 162
+ M R N + L C+ G+ A ++ M N V + ++ +CKE
Sbjct: 167 VFEAMPVR----NEFSFGILARGYCRAGRSVDALKVLDGMPSMNLVVCNTVVAGFCKEGL 222
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A L+E+ G P+VVT + LC GRV+DA I ++ E + G +
Sbjct: 223 VEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPR---- 278
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
P+ T+++++S +C+ G +D A + + M+ G +Y+ + GL
Sbjct: 279 -----------PDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLV 327
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA--LEYLKQMEK 336
GR+ + ++L +E + RI P YN ++ GL +E + +A +E +
Sbjct: 328 RNGRVGEAHELL------REMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGV 381
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P V + + +C GN+ A R D+M ++G PN Y+ L+ + + R EA
Sbjct: 382 MSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAE 441
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV----EEDMRGIGR--------- 443
L++ M+ GY + N ++ GLCR + A+ +V EE +GR
Sbjct: 442 RLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVV 501
Query: 444 -------GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP YS LI ALC++G F A L++M+ K I PD + +++ +
Sbjct: 502 SDSSISQRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFI 556
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 204/459 (44%), Gaps = 48/459 (10%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMM 73
TV+ G + ++ + + + + + P++ FNS + L K +D R F K M
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIF--KDMQ 269
Query: 74 ASGVQG----DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
G D T+ +++ G C V + L+ +M+ G YN + L +N
Sbjct: 270 EDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRN 329
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+VG A L+ +M PN T++I++ CKE +A + S PDVVT
Sbjct: 330 GRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTY 389
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +L CS G + A IL+E M +KGC PN TYN+L+ S
Sbjct: 390 TSLLHAYCSKGNIAAANRILDE-------------------MAQKGCAPNSFTYNVLLQS 430
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
G A + M G S + + +I GLC ++D + I+ M + +
Sbjct: 431 LWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTAL 490
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
GR+ NS L + D ++ ++ P + S+ I C +G ++AK+
Sbjct: 491 GRLG--NSFLSVV-----SDSSIS-----QRCLPDRITYSILISALCKEGRFDEAKKKLL 538
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+MI + P+ VIYD IH YC+ + A +++++M G P T+N ++ G +
Sbjct: 539 EMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKH 598
Query: 426 NVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKG 463
+KL+ E + +G+ P Y+ LIK+ C++G
Sbjct: 599 KSDEIMKLMSEMEEKGVS----PNVLTYNSLIKSFCQQG 633
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 125/304 (41%), Gaps = 46/304 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL + D + + + M+P + + S+L + A
Sbjct: 349 PNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRI 408
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G + +TY +L++ L R + +LL M +G ++ N +I LC+
Sbjct: 409 LDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCR 468
Query: 129 NGKVGRARSLMSDMEE---------------------------PNDVTFSILICAYCKEE 161
N K+ A ++ M E P+ +T+SILI A CKE
Sbjct: 469 NSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEG 528
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC 221
A L + PD V + C G+ A+++L
Sbjct: 529 RFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVL---------------- 572
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
++ME+KGC P+ TYN+LI + E D + + ++M+ G+S N +TY++LI+
Sbjct: 573 ---RDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSF 629
Query: 282 CSGG 285
C G
Sbjct: 630 CQQG 633
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M G TY +L++G ++ + KL+ M+ +GV PN + YN+LI S C+
Sbjct: 573 RDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQ 632
Query: 130 GKVGR 134
G + R
Sbjct: 633 GMLTR 637
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 207/441 (46%), Gaps = 32/441 (7%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P + IL LVK LAR + M+ SGV D+Y Y ++ C +
Sbjct: 158 IAPDQHTASQILFSLVKIRQFALARHLF-DGMLHSGVLLDEYVYTAGIRAYCEVRNLDGA 216
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICA 156
L+ M+ G K ++V YN LI+ LCKN +V A S+++ ++VT L+
Sbjct: 217 KGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYG 276
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
+C+ E L AL + GFVP + +L+ L GRV +A + + GE R+
Sbjct: 277 FCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGEL-RM-- 333
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
+PN+ YN L+++ C+ G+ A + N+M G+ N VTY
Sbjct: 334 ----------------VPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAI 377
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
LI LC G +DD L +L M + +G + + PYNS++ +++ D A+ +L +M +
Sbjct: 378 LIHSLCKRGMMDDALCMLDRMRE--KGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVE 435
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P A S I G C G++ A +M E+G N + LI+ +C+ +++ E
Sbjct: 436 IGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDE 495
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
AS L +MT P TFN V+ G C G++ A +L ++ M RG P + Y
Sbjct: 496 ASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMM---CRGLTPDNYTYRS 552
Query: 455 LIKALCEKGGFQSASMLLVQM 475
LI LC G A + +
Sbjct: 553 LISGLCLTDGASKAKEFVADL 573
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/539 (23%), Positives = 231/539 (42%), Gaps = 61/539 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P E+ ++ GL + + + + + M P++ +N++L+ + K +
Sbjct: 300 PSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRL 359
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G++ ++ TYAIL+ LC + D +L M+ +GV+ YN+LI+ CK
Sbjct: 360 VNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCK 419
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A +S+M E PN ++S +I C++ +L A+ L K G + T
Sbjct: 420 KDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYT 479
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGR----------------LGKVKGGCRFLKEME 228
T ++ C ++ +A + + E +G ++ + +M
Sbjct: 480 FTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMM 539
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G P+ TY LIS C T A + D++ + N + L+ G C GR+
Sbjct: 540 CRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLT 599
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ + M + G K + + ++Y +++ +++ ++M++ + P V +
Sbjct: 600 EAYHVWNEM--AMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTC 657
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I + +GN+ A C+D+MI +G +PN V Y L++ C+ + A L KEM
Sbjct: 658 MINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASH 717
Query: 407 YLPIASTF----------------------------------NTVLSGLCRQGNVGTALK 432
+LP + TF NT++ G C+ G + A+
Sbjct: 718 FLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLANIVSVNTLIKGFCKVGQIQEAID 777
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ R G P YS +I LC+KG A L +M+ KG+ PD + +N L+
Sbjct: 778 LIS---RSTENGFFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILI 833
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 240/559 (42%), Gaps = 100/559 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+E + +I L + M++D + D + + ++ +NS+++ K +D+D+A F
Sbjct: 370 PNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGF 429
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G+ + +Y+ ++ GLC + +L M +GV N+ + LI+ C
Sbjct: 430 L-SEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFC 488
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K+ A L + M E PN+VTF+ +I YC ++ A L ++ G PD
Sbjct: 489 KAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNY 548
Query: 184 T-----------------------------------ITKVLELLCSVGRVMDAVEILEES 208
T +T +L C GR+ +A + E
Sbjct: 549 TYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEM 608
Query: 209 GEQGRLGKV------------------KGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
G GK+ + C +EM+ KG P+ + +I+ Y + G
Sbjct: 609 AMWG--GKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEG 666
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ AL+ +++M DG N VTY L+ LC + +L+ KE P
Sbjct: 667 NMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSA----ELL--CKEMLASHFLP 720
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
NS + + L+Y F +GN+E AK + M++
Sbjct: 721 -NSYTFNCF--------LDY--------------------FATEGNLETAKDLYFAMLQ- 750
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + N+V + LI +C+ +++EA +L+ T +G+ P +++TV+ LC++G++ A
Sbjct: 751 GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEA 810
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
++L E + +G P Y+ LI+ G + + MV KG+ P++ T +L
Sbjct: 811 IELWNEMLY---KGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRAL 867
Query: 491 LICLSQQTTWLLLLLLNEM 509
+ S + L+L+ ++
Sbjct: 868 FVGTSLMSKGNTLMLIPDV 886
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I +C N++ AK +M +EG + V Y+ LI+ C+ +RVREA ++ M G
Sbjct: 204 IRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGV 263
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T T++ G CR + AL++ + R G +P + S ++ L +KG +
Sbjct: 264 AADEVTCRTLVYGFCRTEELDMALEMTGDMAR---LGFVPSEANCSFMLDGLRKKGRVEE 320
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L Q+ ++P+ +N+LL
Sbjct: 321 AFRLACQLGELRMVPNIFAYNALL 344
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 139/492 (28%), Positives = 222/492 (45%), Gaps = 33/492 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + F +I A +N A + + + F +L L E A
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHS 125
++M G D ++Y L+KGLC + + +L+H+M G PN V Y T+IH
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K G VG+A +L M + PN VT + +I CK + + A +L++ +P+
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T ++ S G+ +AV R LKEM R G PNV TY++
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAV-------------------RILKEMSRDGQRPNVVTYSM 362
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI C++G+ A ++FN M G N TY +L+ G + G + D + LM +
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM--VQ 420
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G + +N +Y + + DEA +M++ P V + I G C G ++D
Sbjct: 421 NGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDD 480
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F QMI++G P+++ ++ LIH + + +A EL EM G P +TFN+++
Sbjct: 481 AMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMID 540
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
L ++G V A KL + R G+ P Y+ +I G LL M+ G
Sbjct: 541 KLFKEGKVTEARKLFDLMPRA---GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 597
Query: 480 ILPDYLTWNSLL 491
+ P +T+N+LL
Sbjct: 598 LKPTAVTFNTLL 609
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 178/407 (43%), Gaps = 29/407 (7%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
F + ++ V P+ + LI C G + + + + + VTF+ L+
Sbjct: 129 FNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRT 188
Query: 157 YCKEENLVNAL-VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
C E+ +A+ ++L + G PDV + T +L+ LC+ + +A E++ E G
Sbjct: 189 LCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDG--- 245
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
C PNV +Y +I + + G + A +F M GI N VT +
Sbjct: 246 --------------DNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCN 291
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
++I GLC +D +LQ M D E + YNS+++G Q EA+ LK+M
Sbjct: 292 SVIDGLCKVQAMDKAEAVLQQMID--EHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 349
Query: 336 K--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ P V S+ I C G +A+ F+ MI+ G PN Y L+H Y E +
Sbjct: 350 RDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLV 409
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+ + + M +G P FN + C+ G + A L M+ +G +P Y+
Sbjct: 410 DMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEA-SLTFNKMQQ--QGFMPDIVAYT 466
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+I LC+ G A QM+ G+ PD +T+N+L+ + W
Sbjct: 467 TVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKW 513
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 195/457 (42%), Gaps = 82/457 (17%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDL 63
PP+ + TVI G + DV KA L + + P++ NS++D L K + +D
Sbjct: 249 PPNVVSYTTVIHGFFKE---GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDK 305
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A A ++M+ + + TY L+ G + + + ++L M G +PN V Y+ LI
Sbjct: 306 AEAVL-QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLI 364
Query: 124 HSLCKNGKVGRARSLMSDM----EEPNDVT------------------------------ 149
LCK+G AR + + M ++PN T
Sbjct: 365 DCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMR 424
Query: 150 -----FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
F+I I AYCK L A + K GF+PD+V T V++ LC +GR+ DA+
Sbjct: 425 PGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMS- 483
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
RF +M G P++ T+N LI + G + A ++F +M
Sbjct: 484 -----------------RFC-QMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMD 525
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
GI N T++++I L G++ + K+ LM + G+K + YN++++G + +
Sbjct: 526 RGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLM--PRAGAKPNVVSYNTMIHGYFIAGEV 583
Query: 325 DEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
E ++ L M + + + L D M+ G P+VV LI
Sbjct: 584 GEVMKLLDDMLLIGLKPTAVTFNTL--------------LDGMVSMGLKPDVVTCKTLID 629
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ C++ R+ + L +EM G T N L G+
Sbjct: 630 SCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 222/458 (48%), Gaps = 37/458 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
++ F ++IR G+A + + V+ + + ++PS+ FNS+L +L+K ++A++ +
Sbjct: 155 EDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVF 214
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV D YT+ IL++G C + V +GF+ M P+ V YNTL+ LC+
Sbjct: 215 DEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCR 274
Query: 129 NGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
GKV A ++++ M + P+ VT++ L+ YC + + ALV+ E+ S G P+
Sbjct: 275 AGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T +++ LC V ++ +I E G + GG G +P+ T N L
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFE--------GALGGG----------GFIPDTCTLNTL 376
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK- 301
++++C G L+ AL+VF M + + + TY LIR LC G + ++ + + +
Sbjct: 377 MNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEI 436
Query: 302 ----EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR--SLKIL--GFCV 353
+G ++ Y S+ L R + +A +Q+ K R S KIL G C
Sbjct: 437 LLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMK---RGTQDPLSFKILIKGHCR 493
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+G E M+ VP++ Y LI Q+ A + +++M ++P ST
Sbjct: 494 EGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETST 553
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
F+++L+ L +G + + + + G R ++ S H
Sbjct: 554 FHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTH 591
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 136/514 (26%), Positives = 233/514 (45%), Gaps = 62/514 (12%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNS------ILDVLVK-EDIDLARAF-YRKKMMASG 76
R+I KA FN P L ++ +L++L + ++++AR F + K ++G
Sbjct: 94 RLIKTPSKALQF---FNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNG 150
Query: 77 -VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
V+ +D + L++ + ++ + MKS GV P+ V +N+L+ L K G+ A
Sbjct: 151 TVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMA 210
Query: 136 RSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+S+ +M P+ TF+ILI +CK + ++ F PD+VT +++
Sbjct: 211 QSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVD 270
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
LC G+V A ++ G VK P+V TY L+ YC
Sbjct: 271 GLCRAGKVNIAHNVVN--------GMVKKSTNL---------NPDVVTYTTLVRGYCMKH 313
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+D AL VF +M G+ N +TY+TLI+GLC +ID KI Q+ E + G G P
Sbjct: 314 EIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKID---KIKQIFEGALGG--GGFIP 368
Query: 311 ----YNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCF 364
N+++ ++ALE ++M L P + S+ I C GN E A++ F
Sbjct: 369 DTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLF 428
Query: 365 DQMIE-------EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
D++ E +G P V Y + C+ + +A + +++ G S F +
Sbjct: 429 DELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPLS-FKIL 487
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G CR+G +L+ +R R +P Y LI L +KG A L +M+
Sbjct: 488 IKGHCREGTFEAGYELLVLMLR---RDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIK 544
Query: 478 KGILPDYLTWNSLLI------CLSQQTTWLLLLL 505
+P+ T++S+L C + +++L+L
Sbjct: 545 SSHVPETSTFHSILARLLAKGCAHESARFIMLML 578
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 153/335 (45%), Gaps = 22/335 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +IRG + M+++ + +SRF P L +N+++D L + +++A
Sbjct: 225 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNV 284
Query: 68 YRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ S + D TY L++G C+ + + + + M S+G+KPN + YNTLI L
Sbjct: 285 VNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGL 344
Query: 127 CKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ K+ + + + P+ T + L+ A+C NL +AL + EK PD
Sbjct: 345 CEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPD 404
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T + ++ LC G A ++ +E E+ L + GC P V Y
Sbjct: 405 SATYSVLIRNLCQRGNFERAEQLFDELSEKEIL------------LRDDGCTPLVAAYKS 452
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+ C G A VF + G + + +++ LI+G C G + G ++L LM +
Sbjct: 453 MFEFLCRNGKTAKAERVFRQLMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVLM--LR 509
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
+ Y S++ GL ++ + A + L++M K
Sbjct: 510 RDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIK 544
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/466 (26%), Positives = 221/466 (47%), Gaps = 40/466 (8%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
+++F + P + N+ L L K + DL+R F+R M+ +G+ +TY I++ +C
Sbjct: 88 MTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRD-MVGAGIAPTVFTYNIMIGHVCKEG 146
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFS 151
+ L MK G+ P+ V YNTLI K G + + L +M+ EP+ +T++
Sbjct: 147 DMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYN 206
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI ++CK + ++ A + P+V++ + +++ LC G + A+
Sbjct: 207 ALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI--------- 257
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+F +M R G LPN TY+ LI + C+ G L A + ++M + + N
Sbjct: 258 ----------KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNI 307
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VTY TL+ GLC G +++ ++ + M K G + Y ++++G + D+A+E
Sbjct: 308 VTYTTLLDGLCEEGMMNEAEELFRAM--GKAGVTPNLQAYTALIHGHIKVRSMDKAMELF 365
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M + + P + + G C + +E+ K +M E G N VIY L+ AY +
Sbjct: 366 NEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKA 425
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS---- 445
EA L++EM G TF ++ GLC++G LV+E + GR
Sbjct: 426 GNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRG-------LVQEAIYYFGRMPDHDL 478
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ LI LC+ A L +M K ++PD + + +++
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMI 524
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 217/473 (45%), Gaps = 39/473 (8%)
Query: 26 MINDVVKATDLVS---------RFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
MI V K D+++ + +TP + +N+++D K + ++M G
Sbjct: 138 MIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMG 197
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ D TY L+ C + F+ MK + +KPN + Y+TLI +LCK G + A
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
DM PN+ T+S LI A CK NL A +L ++ ++VT T +L+ L
Sbjct: 258 KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGL 317
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C G + +A E+ + M + G PN+ Y LI + + +
Sbjct: 318 CEEGMMNEAEELF-------------------RAMGKAGVTPNLQAYTALIHGHIKVRSM 358
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A+++FN+M+ I + + + T++ GLCS ++++ I+ M++S G+ I Y
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVI--YT 416
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEE 370
+++ ++ + EA+ L++M L + L G C G V++A F +M +
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDH 476
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
PNV +Y LI C+ + +A +L EM +P + ++ G + GN A
Sbjct: 477 DLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEA 536
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
L + + M G Y+ L+ L + G Q A L +M+GKGI+PD
Sbjct: 537 LNMRNKMME---MGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPD 586
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 178/403 (44%), Gaps = 29/403 (7%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++ P++ +++++D L KE + + M G+ +++TY+ L+ C +G+
Sbjct: 232 DLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEA 291
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
F L M V N V Y TL+ LC+ G + A L M + PN ++ LI
Sbjct: 292 FMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHG 351
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
+ K ++ A+ L + PD++ ++ LCS + LEE
Sbjct: 352 HIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESK-------LEE--------- 395
Query: 217 VKGGCR-FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
C+ + EM+ G N Y L+ +Y + G A+++ +M+ G VT+
Sbjct: 396 ----CKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFC 451
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
LI GLC G + + + M D + ++ Y +++ GL + N +A + +M+
Sbjct: 452 ALIDGLCKRGLVQEAIYYFGRMPDHD--LQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQ 509
Query: 336 --KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ P + + I G GN ++A ++M+E G ++ Y L+ Q +V+
Sbjct: 510 DKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQ 569
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+A + + EM G G +P + +L GN+ A++L E
Sbjct: 570 QARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNE 612
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 42/300 (14%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSA--------------------------------- 255
R C+P ++ L S E G+L++A
Sbjct: 55 RNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGD 114
Query: 256 --LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
D F DM GI+ TY+ +I +C G + + + M+ K G I YN+
Sbjct: 115 LSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMK--KMGLTPDIVTYNT 172
Query: 314 VLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + DE++ ++M+ + P + + I FC + A F +M ++
Sbjct: 173 LIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD 232
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PNV+ Y LI A C+E ++ A + +MT G LP T+++++ C+ GN+G A
Sbjct: 233 LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAF 292
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L +E ++ ++ Y+ L+ LCE+G A L M G+ P+ + +L+
Sbjct: 293 MLADEMLQEHVDLNIV---TYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALI 349
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 220/498 (44%), Gaps = 66/498 (13%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
H ++S P SI F ++ + + + + V+ D + ++ L N +++ +
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ + KMM G + D T+ L+ G CL NR+ + +++ M G+KP+ V+Y
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T+I SLCKNG V A SL ME P+ V ++ L+ C +A LL
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
PDV+T +++ G+ +DA E+ EM R PN+
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYN-------------------EMIRMSIAPNI 282
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI+ +C G +D A +F M+ G + V Y +LI G C ++DD +KI
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY- 341
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGN 356
E S++G G Y ++ I GF G
Sbjct: 342 -EMSQKGLTGNTITYTTL---------------------------------IQGFGQVGK 367
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH---GYLPIAST 413
A+ F M+ G PN+ Y+ L+H C +V++A + ++M G P T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+N +L GLC G + AL +V EDMR R G Y+ +I+ +C+ G ++A L
Sbjct: 428 YNVLLHGLCYNGKLEKAL-MVFEDMR--KREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 474 QMVGKGILPDYLTWNSLL 491
+ KG+ P+ +T+ +++
Sbjct: 485 SLPSKGVKPNVVTYTTMI 502
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 172/395 (43%), Gaps = 64/395 (16%)
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKE 160
H+++SR + P+ + + L++ + K K +L ++ + T ++L+ +C+
Sbjct: 62 HMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQS 120
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
A L K GF PD+VT T ++ C R+ +A+ ++
Sbjct: 121 SQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN-------------- 166
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+M G P+V Y +I S C+ G ++ AL +F+ M+ GI + V Y +L+ G
Sbjct: 167 -----QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
LC+ GR D +S+L G+ + K+ P
Sbjct: 222 LCNSGRWRDA---------------------DSLLRGMTKR--------------KIKPD 246
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + I F +G DA+ +++MI PN+ Y LI+ +C E V EA ++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG-HYSPLIKAL 459
M G P + ++++G C+ V A+K+ E + + L G+ Y+ LI+
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE----MSQKGLTGNTITYTTLIQGF 362
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ G A + MV +G+ P+ T+N LL CL
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 64/321 (19%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD ++ +++ GL GR R + +++ +++ + P + FN+++D VKE L
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRG---MTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+M+ + + +TY L+ G C+ V + ++ ++M+++G P+ V Y +LI+
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 126 LCKNGKVGRARSLMSDMEE---------------------------------------PN 146
CK KV A + +M + PN
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 147 DVTFSILICAYCKEENLVNALVLLE---KSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
T+++L+ C + AL++ E K G P++ T +L LC G++ A+
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 204 ILEESGE--------------QG--RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ E+ + QG + GKVK + KG PNV TY +IS
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 248 ETGVLDSALDVFNDMKIDGIS 268
G+ A +F MK DG+S
Sbjct: 507 REGLKHEAHVLFRKMKEDGVS 527
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC A +M++ G P++V + LI+ +C R+ EA ++ +M G P
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+ T++ LC+ G+V AL L ++ M G P Y+ L+ LC G ++ A
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQ-MENYG--IRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
LL M + I PD +T+N+L+ ++ +L L NEM+
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 227/477 (47%), Gaps = 31/477 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
++R +N+ V + ++PS N +L++ ++ ID A + +M
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVF-DEMSVR 234
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV D ++ +++ G ++ + + L M RG P++ ++ +LC+NG V RA
Sbjct: 235 GVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRA 294
Query: 136 ----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R ++ +PN + F+ LI CK+ ++ A +LE+ G+ P+V T T +++
Sbjct: 295 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 354
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC G A + FLK + PNV TY +I YC+
Sbjct: 355 LCKRGWTEKAFRL------------------FLKLVRSDIYKPNVHTYTSMIGGYCKEDK 396
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
L+ A +F+ MK G+ N TY TLI G C G D +++ LM+D EG + I Y
Sbjct: 397 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDD--EGFRPNIYTY 454
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N+V+ L ++++ EA E L + L V ++ I C +++ A F +M +
Sbjct: 455 NAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNK 514
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G ++ + + LI A+C++++++E+ L + + G +P T+ +++SG C++G+
Sbjct: 515 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDL 574
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
ALK R G +P S Y LI LC+K A L M+ +G+ P +T
Sbjct: 575 ALKYFHNMKR---HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 628
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 214/511 (41%), Gaps = 36/511 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD S F ++ G R I + + + + P IL L + + +Y
Sbjct: 238 PDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWY 297
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM+ G + + + L+ GLC + F++L M G KPN + LI LCK
Sbjct: 298 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 357
Query: 129 NGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G +A L SD+ +PN T++ +I YCKE+ L A +L + G P+V
Sbjct: 358 RGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 417
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ C G A E++ M+ +G PN+ TYN +I
Sbjct: 418 TYTTLINGHCKAGNFDRAYELM-------------------NLMDDEGFRPNIYTYNAVI 458
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S C+ A ++ N G+ + VTY LI+ C I L M +K G
Sbjct: 459 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRM--NKTG 516
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNVEDA 360
+ + N ++ R+ + E+ E L Q+ L P + I G+C +G+ + A
Sbjct: 517 FEADMRLNNILIAAFCRQKKMKES-ERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLA 575
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F M G VP+ Y LI C++ V EA +L + M G P T T+
Sbjct: 576 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYE 635
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C++ + +A+ ++E + + ++ L++ LC + A++ +++ K
Sbjct: 636 YCKRNDSASAMIVLEPLDKKLWIRTV------RTLVRKLCSEKKVGVAALFFQKLLEKDS 689
Query: 481 LPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
D +T + S+ L+ L E +S
Sbjct: 690 SADRVTLAAFTTACSESGKNNLVADLTERIS 720
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 141/302 (46%), Gaps = 19/302 (6%)
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L E GRL + G + +M+ +G P+ T N ++ E+G++D A +VF++M
Sbjct: 176 MLRNFSEIGRLNEAVG---MVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMS 232
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS----VLYGLY 319
+ G+ + ++ ++ G G+I + + L M +G I P N+ +L L
Sbjct: 233 VRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGM-----IQRGFI-PDNATCTLILSALC 286
Query: 320 RENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ A+ Y ++M L P ++ + I G C G+++ A ++M+ G PNV
Sbjct: 287 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 346
Query: 378 IYDCLIHAYCQEERVREASEL-MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ LI C+ +A L +K + Y P T+ +++ G C++ + A L
Sbjct: 347 THTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFS- 405
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
R +G P Y+ LI C+ G F A L+ M +G P+ T+N+++ L +
Sbjct: 406 --RMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCK 463
Query: 497 QT 498
++
Sbjct: 464 KS 465
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 365 DQMIEEGGVPNV-VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
D +I G + + C++ + + R+ EA ++ +M G P + T N VL
Sbjct: 158 DSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIE 217
Query: 424 QGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G + A + +E +RG+ P S + ++ G Q A L M+ +G +P
Sbjct: 218 SGLIDYAENVFDEMSVRGV----CPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIP 273
Query: 483 DYLTWNSLLICLSQQ 497
D T +L L +
Sbjct: 274 DNATCTLILSALCEN 288
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/537 (26%), Positives = 237/537 (44%), Gaps = 67/537 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
+ + + GR R D + L+ + PSL+ N +L L++ D R M
Sbjct: 178 VLVDTYKKTGRVR---DGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+G+ D YTY+ L++ C + K++ M+ G N V YNTLI LC+ G +
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +ME+ P+ T+ +I CK A LL++ G +P+VV + +
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
++ G +A +I++E G +LG++ R LK+M + G
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR------ 286
+ + TYN++I + + A + N+M+ GIS N TY +I GLC G
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASG 474
Query: 287 -----IDDGLKILQLM------------------EDSKEGSKGRISP----YNSVLYGLY 319
I DGLK + E K+ ++ ++P YNS++ GL
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLS 534
Query: 320 RENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ DEA+EY +M EK F P I G+ + GN+E A++ QM+ G PN
Sbjct: 535 NVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDF 594
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLV 434
IY ++ Y + + + + S +K M G +P + V+ L G++ A L ++
Sbjct: 595 IYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI 654
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E++ G +P S Y LI C+ + A LL +M KGI P +N+L+
Sbjct: 655 EKN------GLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALI 705
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 240/554 (43%), Gaps = 39/554 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ T+I GL RA I + + + + P + +I++ L K +M
Sbjct: 281 YNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMS 340
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+G+ + Y+ L+ G + FK++ M + GV+PN + Y+ LI LCK G++G
Sbjct: 341 CAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
RA ++ M + + +T++++I + ++ N A +LL + G P+V T + ++
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
LC +G A +LE+ G R G C LK+M R+
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P++ YN LI G +D A++ +++M G N TY LI G G ++ ++
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
L M +S I Y +L G ++ + ++ LK M + L P + I
Sbjct: 581 LHQMLNSGLNPNDFI--YAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNL 638
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
G+++ A + + G VP+ +IY LI +C+ + +A L+ EM G P
Sbjct: 639 SSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGI 698
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
S +N ++ G C+ ++ A + I +G P Y+ LI C+ G + A L
Sbjct: 699 SCYNALIDGFCKSDDISHARNIFNSI---ICKGLPPNCVTYTTLIDGYCKAGDIRDAIDL 755
Query: 472 LVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMV--------SFVMVVHELSAK 522
+M+ +G+ PD ++ L C + L + EM+ SF +VH
Sbjct: 756 YNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFC-- 813
Query: 523 EKRCKLRSLNHLAH 536
KR KL+ H
Sbjct: 814 -KRGKLQETVKFLH 826
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 136/546 (24%), Positives = 240/546 (43%), Gaps = 65/546 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + +I GL + + D +S + P++ ++++++D +++ + AF
Sbjct: 311 PDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQG-NADEAFK 369
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVG----------------------------- 98
K+M A+GVQ + TY L++GLC R+G
Sbjct: 370 IVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHL 429
Query: 99 ------DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDV 148
+ F LL+ M+ G+ PN Y+ +I+ LC+ G+ RA L+ M +PN
Sbjct: 430 RQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAF 489
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI YC+E + A L+K PD+ ++ L +VG++ +A+E +E
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM 549
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G G ++ + L +M G PN Y ++ Y ++ L
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL 609
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ M G+ + Y +I L S G + + +L ++E K G Y
Sbjct: 610 EKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIE--KNGLVPDSLIYG 667
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ G + ++A+ L +M K + P + I GFC ++ A+ F+ +I +
Sbjct: 668 SLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICK 727
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PN V Y LI YC+ +R+A +L EM G P A ++ + +G G++ A
Sbjct: 728 GLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQA 787
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L + EE I RG S ++ L+ C++G Q L M+ K I+P LT ++
Sbjct: 788 LFITEE---MIARGYAIISS-FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENI 843
Query: 491 LICLSQ 496
+I L +
Sbjct: 844 VIGLGE 849
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + T+I G +A I D + + + + P ++ S+L DL +A
Sbjct: 730 PPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVY-SVLAAGCSNSGDLQQAL 788
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M + ++ L+ G C ++ + K LHVM + + P+ + ++ L
Sbjct: 789 FITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLG 848
Query: 128 KNGKVGRARSLMSDMEEPN 146
+ GK+ A ++ ++++ N
Sbjct: 849 EAGKLSEAHTIFVELQQKN 867
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 209/464 (45%), Gaps = 57/464 (12%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
++D + + + + + PS F +L + K +M + G+ D YT I
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN 146
L+ C R+G F +L + G +P++ +NTLI LC GK+G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGE------------ 200
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
AL L +K+ GF PDVVT ++ LC VG A+
Sbjct: 201 -------------------ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI---- 237
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
R L+ M +K C PNV YN +I S C+ + A ++F++M G
Sbjct: 238 ---------------RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKG 282
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
IS + TY++LI LC+ +L M +SK + +++V+ L +E
Sbjct: 283 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK--IMPNVVVFSTVVDALCKEGMIAI 340
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A + + M K + P V + + G C+ +++A + FD M+ +G VPNV Y+ LI+
Sbjct: 341 AHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 400
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
YCQ +R+ +A L+++M+ G + T+NT++ GLC G + A+ L E + G
Sbjct: 401 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE---MVASG 457
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+P Y L+ LC+ A +LL + G + D L +N
Sbjct: 458 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYN 501
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 175/387 (45%), Gaps = 26/387 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD +I R + + + P FN+++ L E + A
Sbjct: 144 PPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEG-KIGEAL 202
Query: 68 YR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ K + G Q D TY LM GLC +LL M + +PN + YNT+I SL
Sbjct: 203 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 262
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ +V A +L S+M P+ T++ LI A C + LL + + +P+V
Sbjct: 263 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 322
Query: 183 VTITKVLELLCSVGRVM---DAVEILEESGEQGRL----GKVKGGC---------RFLKE 226
V + V++ LC G + D V+++ + G + + + G C +
Sbjct: 323 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 382
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M KGC+PNV +YNILI+ YC+ +D A+ + M + G+ + VTY+TLI GLC GR
Sbjct: 383 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 442
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
+ + + M S G + Y +L L + + EA+ LK +E L +
Sbjct: 443 LQHAIALFHEMVAS--GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 500
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ I G C G +E A+ F + +G
Sbjct: 501 NIAIDGMCRAGELEAARDLFSNLSCQG 527
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 184/420 (43%), Gaps = 34/420 (8%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TF 150
N + D + M P++V + L+ S+ K SL + M+ P DV T
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES-G 209
+ILI ++C L A +L K G PD T ++ LC G++ +A+ + +++ G
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
E G P+V TY L++ C+ G +A+ + M
Sbjct: 211 E--------------------GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRP 250
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N + Y+T+I LC ++ + + E +G I YNS+++ L +
Sbjct: 251 NVIAYNTIIDSLCKDRQVTEAFNLFS--EMITKGISPDIFTYNSLIHALCNLCEWKHVTT 308
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L +M K+ P V S + C +G + A D MI+ G P+VV Y L+ +C
Sbjct: 309 LLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHC 368
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ EA ++ M G +P ++N +++G C+ + A+ L+E+ +G +
Sbjct: 369 LRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL---QGLIA 425
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
+ Y+ LI LC G Q A L +MV G +PD +T+ LL +C + ++LL
Sbjct: 426 DTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLL 485
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 135/316 (42%), Gaps = 57/316 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T++ GL + + ++ + + N P++ +N+I+D L K D + AF
Sbjct: 215 PDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK-DRQVTEAFN 273
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G+ D +TY L+ LC LL+ M + + PN V+++T++ +LC
Sbjct: 274 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 333
Query: 128 KNGKVGRARS-------------------------LMSDMEE--------------PNDV 148
K G + A L S+M+E PN
Sbjct: 334 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 393
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+++ILI YC+ + + A+ LLE+ G + D VT ++ LC VGR+ A+ + E
Sbjct: 394 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 453
Query: 209 GEQGRLG----------------KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
G++ + LK +E ++ YNI I C G L
Sbjct: 454 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 513
Query: 253 DSALDVFNDMKIDGIS 268
++A D+F+++ G +
Sbjct: 514 EAARDLFSNLSCQGFA 529
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ +L + + L QM+ + P ++ I FC + A +++
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 174
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G P+ ++ LI C E ++ EA L + G G+ P T+ T+++GLC+ GN
Sbjct: 175 KLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTS 234
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A++L+ ++ + P Y+ +I +LC+ A L +M+ KGI PD T+N
Sbjct: 235 AAIRLLRSMVQ---KNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYN 291
Query: 489 SLLICLSQQTTW-LLLLLLNEMVS 511
SL+ L W + LLNEMV+
Sbjct: 292 SLIHALCNLCEWKHVTTLLNEMVN 315
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 8/194 (4%)
Query: 322 NQQDEALEYLKQMEKLFP--RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
N D+AL +M + P VD + + + QM G P+V
Sbjct: 91 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ LI+++C R+ A ++ ++ G P +TFNT++ GLC +G +G AL L + +
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD---K 207
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
IG G P Y L+ LC+ G +A LL MV K P+ + +N+++ +C +Q
Sbjct: 208 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267
Query: 498 TTWLLLLLLNEMVS 511
T L +EM++
Sbjct: 268 VTE-AFNLFSEMIT 280
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 207/443 (46%), Gaps = 36/443 (8%)
Query: 26 MINDVVKATDLVSR---FN------MTPSLKIFNSILDVLV-KEDIDLARAFYRKKMMAS 75
+IN V++ L S FN P FN++L +V + F+ + +
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK- 158
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
V D Y++ I++KG C + F LL ++ G PN VIY TLI CK G++ +A
Sbjct: 159 -VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ L +M + N+ T+++LI K + EK G P++ T V+
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQ 277
Query: 192 LCSVGRVMDAVEILEESGEQG------RLGKVKGG-CRFLKEMERKGCL---------PN 235
LC GR DA ++ +E E+G + GG CR +K E + PN
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPN 337
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TYN LI +C G L AL + D+K G+S + VTY+ L+ G C G K+++
Sbjct: 338 LITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVK 397
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCV 353
ME+ G K Y ++ R + + A++ ME+L P S+ I GFC+
Sbjct: 398 EMEE--RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A R F M+E+ PN VIY+ +I YC+E A L ++M P ++
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS 515
Query: 414 FNTVLSGLCRQGNVGTALKLVEE 436
++ ++ LC++ + A LVE+
Sbjct: 516 YSYLIRVLCKERKLKEAEDLVEK 538
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 205/414 (49%), Gaps = 35/414 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLV---SRFNMTPSLKIFNSILDVLVKE-DIDLARAFYR 69
F VI+G A ++ K+ DL+ F +P++ I+ +++D K+ +I+ A+ +
Sbjct: 166 FGIVIKGCCEA---GEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M G+ +++TY +L+ GL GF++ M+ GV PN YN +++ LCK+
Sbjct: 223 E-MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281
Query: 130 GKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A + +M E N VT++ LI C+E A ++++ S+ P+++T
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ CSVG+ LGK CR LK +G P++ TYN+L+S
Sbjct: 342 NTLIDGFCSVGK----------------LGKALSLCRDLKS---RGLSPSLVTYNVLVSG 382
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C G A + +M+ GI + VTY LI ++ +++ ME+ G
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEEL--GLV 440
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+ +++G + Q +EA K M EK+ P V + ILG+C +G+ A R
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRL 500
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
F M E+ PNV Y LI C+E +++EA +L+++M G P + N +
Sbjct: 501 FRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 201/453 (44%), Gaps = 57/453 (12%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM--SD 141
Y +++ + + + M +G P S +N L+ + + + S
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 142 MEEPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
++ DV +F I+I C+ + + LL + FGF P+VV T +++ C G +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A ++ E G+ G + G K G ++M+ G PN+ TYN +++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED----- 299
C+ G A VF++M+ G+S N VTY+TLI GLC + ++ K++ M+
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINP 336
Query: 300 ------------SKEGSKGR------------ISP----YNSVLYGLYRENQQDEALEYL 331
G G+ +SP YN ++ G R+ A + +
Sbjct: 337 NLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMV 396
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
K+ME+ + P V ++ I F N+E A + M E G VP+V Y LIH +C +
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
++ EAS L K M P +NT++ G C++G+ AL+L DM + P
Sbjct: 457 GQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLF-RDME--EKELAPNV 513
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
YS LI+ LC++ + A L+ +M+ GI P
Sbjct: 514 ASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 161/344 (46%), Gaps = 27/344 (7%)
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ ++I AY + ++L +++ + GFVP +L +
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVV---------------- 140
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
G + C F E + K L +V ++ I+I CE G ++ + D+ +++ G S
Sbjct: 141 --GSSSFNQWWC-FFNESKIKVVL-DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSP 196
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N V Y TLI G C G I+ + E K G Y +++GL++ + + E
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLF--FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFE 254
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M++ +FP + + C DG +DA + FD+M E G N+V Y+ LI C
Sbjct: 255 MYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+E + EA+++M +M + P T+NT++ G C G +G AL L D++ RG P
Sbjct: 315 REMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLC-RDLK--SRGLSP 371
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ L+ C KG A+ ++ +M +GI P +T+ L+
Sbjct: 372 SLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + ++ G R + K + + PS + ++D + D
Sbjct: 371 PSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQL 430
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R M G+ D +TY++L+ G C+ ++ + +L M + ++PN VIYNT+I CK
Sbjct: 431 RSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCK 490
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
G RA L DMEE PN ++S LI CKE L A L+EK G P
Sbjct: 491 EGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/562 (25%), Positives = 249/562 (44%), Gaps = 83/562 (14%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
H+ PD V+ GL +AR I+ KA +L F PS+ +I+
Sbjct: 12 HTTGLMPDVVNCNIVLNGLCKARKID---KAIEL---FLEMPSMGCEPTIV--------- 56
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+Y ++ GL +++ + +K + M G +P+ + + TL
Sbjct: 57 --------------------SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTL 96
Query: 123 IHSLCKNGKVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
IH CK G+ L++ + P+ ++ +I YCK +L +LE+ + G +
Sbjct: 97 IHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCI 156
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRF 223
PD +++ LC +GRV +A E+ E + G L GK+ C
Sbjct: 157 PDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACEL 216
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM +G P ++ + LI + C+ G +D A +++ + ++ + V Y++L+ G C
Sbjct: 217 YREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCK 276
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRA 341
GR+DDGLK+L M + I YN ++ G R N+ D+ALE K + P A
Sbjct: 277 LGRVDDGLKLLLQMVECDNFPD--IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNA 334
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I G +E+AK FD+ + +V+ Y +I +R+ EA EL ++
Sbjct: 335 ATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEK 388
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
+ G P + V+ GL + G + LK EDM G +P Y+ +I LC+
Sbjct: 389 LKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF-EDMS--GSSCVPTRTTYTVVIDGLCK 445
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-----LLLLLLNE-----MVS 511
A + QMV KG +PD +T+ +L+ S+ + LL ++L + V+
Sbjct: 446 AQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVT 505
Query: 512 FVMVVHELSAKEKRCKLRSLNH 533
+ +VH CKL +N
Sbjct: 506 YGSIVHGF------CKLDMINE 521
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 137/541 (25%), Positives = 240/541 (44%), Gaps = 71/541 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + ++ G RA ++D ++ L+S + P+ + +I+ L + ++ A+AF
Sbjct: 297 PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF 356
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + D +Y ++KGL + R+ + +L +K+ G PN V Y +I L
Sbjct: 357 FDEAL-------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL 409
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ DM P T++++I CK + L +A + E+ G VPD +
Sbjct: 410 KAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469
Query: 184 TIT----------------KVLELL-------------------CSVGRVMDAVEILEES 208
T T K+L+++ C + + +A E++ +
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G G+ + + L EM +GC P+V Y LI TG +
Sbjct: 530 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 589
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A VF+ M G + + +TY T+I+ G ++ +IL+LM +K G YN
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM--AKSGVGPDCFAYN 647
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ G + + D+A +M + P AV ++ + G DG + A F +M+E+
Sbjct: 648 SLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 707
Query: 371 GGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
VP +V Y LI + RV EA +EM G +P T+ +++ L + G +
Sbjct: 708 DEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPE 767
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A KLV EDM +G P YS LI L + +A + +M+ +G P+ +T+
Sbjct: 768 AKKLV-EDMVKLGVN--PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKV 824
Query: 490 L 490
L
Sbjct: 825 L 825
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 216/486 (44%), Gaps = 44/486 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
++I L +A +++ + V + S +NS++D K L R K++
Sbjct: 234 SLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCK----LGRVDDGLKLLLQ 289
Query: 76 GVQGDDY----TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
V+ D++ TY IL+ G NR+ D +L ++ S G KPN+ Y T+I L +
Sbjct: 290 MVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQR 349
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ A++ E + ++++ +I + + A L EK + G P+VV T V++
Sbjct: 350 MEEAKAFFD--EALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDG 407
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
L GR+ D G + ++M C+P TY ++I C+ +
Sbjct: 408 LLKAGRIED-------------------GLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQM 448
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
L A VF M G + +TY TLI G ++D+ K+L +M +G + Y
Sbjct: 449 LPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM--LTKGPEPTAVTY 506
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG-----FCVDGNVEDAKRCFDQ 366
S+++G + + +EA E + QM + R + L I + G E+A + +
Sbjct: 507 GSIVHGFCKLDMINEAKEVIAQMRE---RGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 563
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M G P+V++Y LI RV EA + M G P A T+ T++ + GN
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623
Query: 427 VGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
V A +++E + G+G P Y+ L+ + A + +MV GI P+ +
Sbjct: 624 VEAAGEILELMAKSGVG----PDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAV 679
Query: 486 TWNSLL 491
T+N L+
Sbjct: 680 TFNVLM 685
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 198/441 (44%), Gaps = 27/441 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARA 66
P+ + VI GL +A I D +K + +S + P+ + ++D L K + D +
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 455
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F ++M+ G D TY L+ G +++ + KLL VM ++G +P +V Y +++H
Sbjct: 456 F--EQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 513
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK + A+ +++ M E P F+ L+ Y + A +L + + G PDV
Sbjct: 514 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 573
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
+ T +++LL S GRV +A + + E+G ++G V+ L+
Sbjct: 574 ILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILEL 633
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M + G P+ YN L+ Y + +D A V++ M GI N VT++ L+ GL G+
Sbjct: 634 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
D + + M + E +S Y ++ GL + + EA ++M + P
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVS-YTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTY 752
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G + +AK+ + M++ G P+V Y LI V A ++ +EM
Sbjct: 753 TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMK 812
Query: 405 HGYLPIASTFNTVLSGLCRQG 425
G P T+ + G G
Sbjct: 813 RGCAPNEVTYKVLRRGFRAAG 833
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 198/428 (46%), Gaps = 37/428 (8%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M +G+ D I++ GLC ++ +L M S G +P V YNT+I L
Sbjct: 9 KEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASI 68
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
K+ A + M EP+ + F+ LI +CK +LL ++ F PDV
Sbjct: 69 DKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFRPDVFLY 127
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T V+ C + G + G + L+EM GC+P+ Y +LI
Sbjct: 128 TSVIHGYC-------------------KAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDP 168
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G +D A ++F M+ G ++VT+ TLI L + G++D+ ++ + M + G +
Sbjct: 169 LCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM--IERGYE 226
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ +S+++ L + + DEA E + + +K+ V + + G+C G V+D +
Sbjct: 227 PYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKL 286
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
QM+E P++ Y+ L+ + + R+ +A EL K ++ +G P A+T+ T++ GL
Sbjct: 287 LLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYD 346
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+ A +E + I Y+ +IK L + A L ++ G P+
Sbjct: 347 AQRMEEAKAFFDEALDVIS---------YTTVIKGLADSKRIDEACELFEKLKTAGCSPN 397
Query: 484 YLTWNSLL 491
+ + +++
Sbjct: 398 VVAYTAVI 405
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 146/334 (43%), Gaps = 27/334 (8%)
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
AL L++ + G +PDVV VL LC ++ A+E+ FL
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIEL------------------FL 44
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM GC P + +YN +IS +D A FN M +G + + + TLI G C
Sbjct: 45 -EMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKA 103
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G+ G L+ + + + + Y SV++G + D + L++M P A
Sbjct: 104 GQPQVG---HMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAA 160
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I C G V++A F++M + G + + V + LI A ++ EA EL +EM
Sbjct: 161 AYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREM 220
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
GY P ++++ LC+ G V A ++ + + + Y+ L+ C+
Sbjct: 221 IERGYEPYLEVQDSLIFALCKAGKVDEANEIYQ---TVVAKKVATSRVAYNSLMDGYCKL 277
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G LL+QMV PD T+N L+ S+
Sbjct: 278 GRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSR 311
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 108/223 (48%), Gaps = 24/223 (10%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M SGV D + Y LM G RV F + M + G+KPN+V +N L+H L K+GK
Sbjct: 634 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 693
Query: 132 VGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
RA SL +M E P V+++ILI K + A ++ G +P+ T T
Sbjct: 694 TDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYT 753
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ L GR+ +A +++E +M + G P+V Y+ LI+
Sbjct: 754 SLIYSLAKAGRIPEAKKLVE-------------------DMVKLGVNPDVQAYSALITGL 794
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
++ ++D+A DVF +M G + N VTY L RG + GR D
Sbjct: 795 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 837
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 116/247 (46%), Gaps = 8/247 (3%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
++ ALD +M G+ + V + ++ GLC +ID +++ +E G + I Y
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIEL--FLEMPSMGCEPTIVSY 58
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N+V+ GL ++ DEA ++ M P + + I GFC G + +Q ++
Sbjct: 59 NTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK 118
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
P+V +Y +IH YC+ + ++++EM G +P A+ + ++ LC+ G V
Sbjct: 119 RFR-PDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDE 177
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L E MR G L + LI+AL G A L +M+ +G P +S
Sbjct: 178 AYELFER-MR--KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDS 234
Query: 490 LLICLSQ 496
L+ L +
Sbjct: 235 LIFALCK 241
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
+ PP + +I GLG+A +++ + + P + S++ L K I A
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 768
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ + M+ GV D Y+ L+ GL ++ V + + M RG PN V Y L
Sbjct: 769 KKLV-EDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 210/434 (48%), Gaps = 38/434 (8%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
FYR +++ S ++ +Y ILM+G C +LL MKS GV+PN VI+ T+I L
Sbjct: 17 FYRHRLLGS-YAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGL 75
Query: 127 CKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C GKV +A R + D PN T+SIL+ A CK A L+ + G P+V
Sbjct: 76 CTAGKVSQALLHFRRIGEDC-APNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNV 134
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ + R +D V +L LKEM ++GC +V TY ++
Sbjct: 135 VTYNALIDGFRKLER-LDEVLML------------------LKEMSQRGCRADVITYTMI 175
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS--GGRIDDGLKILQLMEDS 300
+ +C+ +D A + N ++ N VTY++L L + G R + L +L+ M
Sbjct: 176 LDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTAEGDRTTEALSLLEKM--I 229
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVE 358
+EG++ Y +VL L + ++ DEA + L M + D S KIL F G
Sbjct: 230 QEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTY 289
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
D+ +M+ G + + + +IH +C+ + EA +L K M G +P T+NT++
Sbjct: 290 DSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLI 349
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C+ TA+KL+ + ++ + P Y+ +IK+ C + + A + MV
Sbjct: 350 GAFCKAQQPDTAVKLLHQMIQADFK---PNVITYNSIIKSFCREQREEEARGIFQMMVDS 406
Query: 479 GILPDYLTWNSLLI 492
G PD +++ +L I
Sbjct: 407 GCFPDRVSYTTLKI 420
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 211/441 (47%), Gaps = 30/441 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + F T+I+GL +++ V D + P + +NSI++ + + D LA
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M V+ D +TY+ ++ LC + L M+++G+K + V YN+L+ LC
Sbjct: 216 LRK-MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK L+ DM PN +TF++L+ + KE L A L ++ + G P+++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R+ +A +L+ M R C P++ T+ LI
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDL-------------------MVRNKCSPDIVTFTSLI 375
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D + VF ++ G+ N VTY L++G C G+I ++ Q M G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHG 433
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +L GL + ++ALE + Q K+ V + I G C G VEDA
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNV+ Y +I C++ + EA+ L+++M G P T+NT++
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 422 CRQGNVGTALKLVEEDMRGIG 442
R G++ + KL+EE M+ G
Sbjct: 554 LRDGDLTASAKLIEE-MKSCG 573
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 233/499 (46%), Gaps = 43/499 (8%)
Query: 15 ITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMA 74
I + + + R+R + +V D F+ K FN +LD + K++
Sbjct: 73 IALFQEMIRSRPLPSLV---DFSRFFSAIARTKQFNLVLD-------------FCKQLEL 116
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ + YT I++ C + + +L + G +P++ +NTLI L GKV
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L+ M E P+ VT++ ++ C+ + AL LL K DV T + +++
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC G + A+ + +E +G + GK G LK+M + +P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV T+N+L+ + + G L A +++ +M GIS N +TY+TL+ G C R+ + +L
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
LM +K I + S++ G + D+ ++ + + K L AV S+ + GFC
Sbjct: 357 DLMVRNK--CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++ A+ F +M+ G +P+V+ Y L+ C ++ +A E+ +++
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ T++ G+C+ G V A L +G P Y+ +I LC+KG A++LL
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M G P+ T+N+L+
Sbjct: 532 RKMEEDGNAPNDCTYNTLI 550
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 41/229 (17%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLA 64
+ PD F ++I+G + ++D +K +S+ + + ++ ++ + I LA
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNR---------------------------- 96
+ ++M++ GV D TY IL+ GLC +
Sbjct: 423 EELF-QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 97 -------VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----P 145
V D + L + +GVKPN + Y +I LCK G + A L+ MEE P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
ND T++ LI A+ ++ +L + L+E+ S GF D +I V+++L S
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 16/231 (6%)
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DD + + Q M S+ + ++ + R Q + L++ KQ+E + ++
Sbjct: 70 DDAIALFQEMIRSRPLPS--LVDFSRFFSAIARTKQFNLVLDFCKQLE---LNGIAHNIY 124
Query: 348 ILGFCVDGNVEDAKRCFD-----QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
L ++ K CF ++++ G P+ ++ LI E +V EA L+ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCE 461
+G P T+N++++G+CR G+ AL L+ + + R + YS +I +LC
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT----YSTIIDSLCR 240
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL-LLLLNEMVS 511
G +A L +M KGI +T+NSL+ L + W LLL +MVS
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 180/379 (47%), Gaps = 34/379 (8%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSF 174
+ +N ++ LC GK RA L+ M PN VT++ +I +C + AL V+ E
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRE 175
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G PD T ++ C +GR+ DA ++ +E QG + P
Sbjct: 176 RGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVA------------------P 217
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+ YN LI YC+ G LD AL DM G++ TY+ L+ L GR D +L
Sbjct: 218 SAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVL 277
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFC 352
+ M+ + G + YN ++ G +E + +ALE ++M + RA V + I F
Sbjct: 278 EEMQ--RNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFS 335
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G V++ R F +++G P+VV+Y+ LI+++C + A E+M EM P
Sbjct: 336 RKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDV 395
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+NT++ G C G + A L++E + RG P G LC+ G A L+
Sbjct: 396 TYNTLIRGFCLLGRLDEARGLIDEMTK---RGIQPDLG--------LCKNGQGDDAENLM 444
Query: 473 VQMVGKGILPDYLTWNSLL 491
+MVGKGI PD T+ SL+
Sbjct: 445 KEMVGKGITPDDSTYISLI 463
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 178/363 (49%), Gaps = 38/363 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
T+ I+++ LC T + +LL M +PN+V YNT+I C G+V A +M +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 143 EE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVG 196
E P+ T++ LI +CK + +A + ++ + G V P V ++ C G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRG 233
Query: 197 RVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYN 240
++ A++ E+ ++G G+ L+EM+R G P+V TYN
Sbjct: 234 KLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYN 293
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
ILI+ YC+ G AL+VF +M G+ VTY +LI G++ + ++ ++
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVA--V 351
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
K+G + + YN+++ + A E + +MEK + P V + I GFC+ G ++
Sbjct: 352 KKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLD 411
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A+ D+M + G P++ + C+ + +A LMKEM G G P ST+ +++
Sbjct: 412 EARGLIDEMTKRGIQPDLGL--------CKNGQGDDAENLMKEMVGKGITPDDSTYISLI 463
Query: 419 SGL 421
GL
Sbjct: 464 EGL 466
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 154/326 (47%), Gaps = 33/326 (10%)
Query: 31 VKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMK 89
V+A +L+ + P+ +N+++ + + A R+ G+ D YTYA L+
Sbjct: 133 VRALELLRQMP-RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLIS 191
Query: 90 GLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP--- 145
G C R+ D K+ M ++G V P++V+YN LI C GK+ A DM +
Sbjct: 192 GWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVA 251
Query: 146 -NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
T+++L+ A + +A +LE+ G PDV T ++ C G A+E+
Sbjct: 252 MTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEV 311
Query: 205 LEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
EE +G R G+V+ R K +KG P+V YN LI+S+C
Sbjct: 312 FEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCA 371
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G ++ A ++ +M+ I + VTY+TLIRG C GR+D+ ++ M +K G + +
Sbjct: 372 GGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEM--TKRGIQPDL 429
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM 334
GL + Q D+A +K+M
Sbjct: 430 --------GLCKNGQGDDAENLMKEM 447
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 17/280 (6%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
RF +++ V + + L+SS A +F D+ + T++ ++R L
Sbjct: 71 RFYAQLKSLSVPIPVASLHPLLSSLPSA----PAFALFADIYRLRLPLCTTTFNIMLRHL 126
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LF 338
C+ G+ L++L+ M + YN+V+ G + ALE +++M + +
Sbjct: 127 CATGKPVRALELLRQM------PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIA 180
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASE 397
P + I G+C G +EDA + FD+M+ +G V P+ V+Y+ LI YC ++ A +
Sbjct: 181 PDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQ 240
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
++M G +T+N ++ L G A ++EE R G P Y+ LI
Sbjct: 241 YREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRN---GLSPDVFTYNILIN 297
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C++G + A + +M KG+ +T+ SL+ S++
Sbjct: 298 GYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRK 337
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD 81
GRA +D + + R ++P + +N +++ KE + ++M GV+
Sbjct: 268 GRA---SDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATA 324
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY L+ +V + +L V +G++P+ V+YN LI+S C G + RA +M++
Sbjct: 325 VTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAE 384
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
ME+ P+DVT++ LI +C L A L+++ G PD+ LC G+
Sbjct: 385 MEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLG--------LCKNGQ 436
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
DA + +KEM KG P+ TY LI
Sbjct: 437 GDDAENL-------------------MKEMVGKGITPDDSTYISLI 463
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 216/484 (44%), Gaps = 59/484 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+TP++ N++++ K + Y K++ +G+ D +TY L+ G C V
Sbjct: 200 VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAN 259
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+ M ++G N V Y LIH C+ +V A L S M E P T++++I A
Sbjct: 260 AIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFAL 319
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
C+ AL + ++ P+V T T ++ LC DA +IL
Sbjct: 320 CQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKIL------------ 367
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
M KG +P+V TYN LI YC+ G+ SAL++ + M+ + S N TY+ L
Sbjct: 368 -------NGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNEL 420
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
I G C G I + +L M + K + + YN +++G +E A + L M +
Sbjct: 421 ILGFCRGKNIHKAMSLLHKMLERK--LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
L P S+ I C G VE+A+ F+ + E+G N VIY LI YC+ +V +
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE-------------------- 435
L+ +M G +P + T+N+++ G C++ N A LV+
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598
Query: 436 ----------EDM--RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
DM + + GS P Y+ I A C G + A +L+ +M KGI+PD
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658
Query: 484 YLTW 487
+ +
Sbjct: 659 TMLY 662
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 207/456 (45%), Gaps = 30/456 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+E + +I G AR +++ +K + N P+++ + I+ L +
Sbjct: 273 NEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMF 332
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M Q + +TY +L+ LC + D K+L+ M +G+ P+ V YN LI CK
Sbjct: 333 KEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKK 392
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G A ++S ME PN T++ LI +C+ +N+ A+ LL K P+VVT
Sbjct: 393 GLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTY 452
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ C ++G LG + L M G +P+ TY++ I +
Sbjct: 453 NILIHGQC----------------KEGDLGSAY---KLLSLMNESGLVPDEWTYSVFIDT 493
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G+++ A +F +K GI N V Y TLI G C G++ DG +L M + G
Sbjct: 494 LCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSA--GCV 551
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
YNS++ G +E EA + M K + P A ++ I D + A
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
FDQM+ G P+V IY IHAYC R+++A L+ +M G +P + + R
Sbjct: 612 FDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGR 671
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
G++ A +++ R G P YS LIK L
Sbjct: 672 FGSIDGAFGILK---RMHEVGCEPSYYTYSCLIKHL 704
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 175/387 (45%), Gaps = 32/387 (8%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNAL 167
V PN NT+++ CK G V A +S + + + T++ LI YC+ +N+ A
Sbjct: 200 VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAN 259
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
+ + G + + V+ T ++ C RV +A+ + +M
Sbjct: 260 AIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEAL-------------------KLFSQM 300
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
C P V TY ++I + C+ G AL++F +M N TY LI LC
Sbjct: 301 HEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNF 360
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRS 345
DD KIL M + +G + YN+++ G ++ ALE L ME P A +
Sbjct: 361 DDAKKILNGMLE--KGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYN 418
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
ILGFC N+ A +M+E PNVV Y+ LIH C+E + A +L+ M
Sbjct: 419 ELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G +P T++ + LC++G V A L E +GI + YS LI C+ G
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI----YSTLIDGYCKVGK 534
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
LL +M+ G +P+ +T+NSL+
Sbjct: 535 VSDGRFLLDKMLSAGCVPNSITYNSLI 561
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 141/287 (49%), Gaps = 7/287 (2%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+LG V ++ ++ + G + TY LI YC +D+A +F M G N V
Sbjct: 216 KLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEV 275
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+Y LI G C R+D+ LK+ M + + + Y +++ L + ++ EAL K
Sbjct: 276 SYTNLIHGFCEARRVDEALKLFSQMHE--DNCWPTVRTYTVIIFALCQLGRKTEALNMFK 333
Query: 333 QMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M + P ++ I C D N +DAK+ + M+E+G +P+VV Y+ LI YC++
Sbjct: 334 EMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKG 393
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
A E++ M + P A T+N ++ G CR N+ A+ L+ + + R P
Sbjct: 394 LSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLH---KMLERKLQPNVV 450
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI C++G SA LL M G++PD T++ + L ++
Sbjct: 451 TYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKR 497
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 189/460 (41%), Gaps = 70/460 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I G R + I+ + + + P++ +N ++ KE DL A+
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEG-DLGSAYK 470
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M SG+ D++TY++ + LC V + L +K +G+K N VIY+TLI C
Sbjct: 471 LLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYC 530
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL-------------- 169
K GKV R L+ M PN +T++ LI YCKE+N A +L
Sbjct: 531 KVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAAD 590
Query: 170 ---------------------LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ S G PDV T + CS GR+ DA E+L
Sbjct: 591 TYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDA-EVL--- 646
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ +M KG +P+ Y + I +Y G +D A + M G
Sbjct: 647 ---------------ICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCE 691
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
++ TY LI+ L + K + + + S G S + +R + L
Sbjct: 692 PSYYTYSCLIKHLSNAKP-----KEVSSSSELSDLSSGVAS---NDFSNCWRRVDYEFTL 743
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ +M + P A I G C G +E A R FD M E+G PN IY+ L+
Sbjct: 744 DLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCS 803
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
CQ EA + M + +LP + +L GL +GN
Sbjct: 804 CQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGN 843
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 207/521 (39%), Gaps = 62/521 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I L +D K + + + PS+ +N+++D K+ + +
Sbjct: 342 PNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEI 401
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M ++ + TY L+ G C + LLH M R ++PN V YN LIH CK
Sbjct: 402 LSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK 461
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +G A L+S M E P++ T+S+ I CK + A L E G + V
Sbjct: 462 EGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI 521
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +++ C VG+V D GR L +M GC+PN TYN LI
Sbjct: 522 YSTLIDGYCKVGKVSD-----------GRF--------LLDKMLSAGCVPNSITYNSLID 562
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ A + + M I TY LI L D + M + GS
Sbjct: 563 GYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLST--GS 620
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y + ++ + +A + +M + P + +L I + G+++ A
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS-------------------------- 396
+M E G P+ Y CLI + + +E S
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLI-KHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDY 739
Query: 397 ----ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+L +M HG P A+T+ ++GLC+ G + A +L + +G P Y
Sbjct: 740 EFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKE---KGQSPNEDIY 796
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ L+ C+ G + A L M+ LP +L LL+C
Sbjct: 797 NSLLGCSCQLGLYGEAIRWLDIMIENRHLP-HLDSCKLLLC 836
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 211/524 (40%), Gaps = 71/524 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAF 67
P + +I G + + ++ L+ N +P+ + +N IL ++I A +
Sbjct: 377 PSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSL 436
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M+ +Q + TY IL+ G C +G +KLL +M G+ P+ Y+ I +LC
Sbjct: 437 LHK-MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLC 495
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V ARSL ++E N+V +S LI YCK + + LL+K S G VP+ +
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI 555
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C E++ ++ RL + M ++ P DTY ILI
Sbjct: 556 TYNSLIDGYCK-----------EKNFKEARL--------LVDIMIKRDIEPAADTYTILI 596
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + D A D+F+ M G + Y I CS GR+ D ++ K
Sbjct: 597 DNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLI-----CKMN 651
Query: 304 SKGRISPYNSVLYGLY-----RENQQDEALEYLKQMEKL-------------------FP 339
+KG I P +++LY L+ R D A LK+M ++ P
Sbjct: 652 AKG-IMP-DTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKP 709
Query: 340 RAVDRSLKILGFCVDGNVEDAKRC------------FDQMIEEGGVPNVVIYDCLIHAYC 387
+ V S ++ D C F +M E G PN Y I C
Sbjct: 710 KEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLC 769
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ + A L M G P +N++L C+ G G A++ ++ I LP
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLD---IMIENRHLP 826
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ L ++G + A + + D + W L+
Sbjct: 827 HLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLI 870
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 144/366 (39%), Gaps = 65/366 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + ++I G + + + D++ + ++ P+ + ++D L+K+D D A
Sbjct: 552 PNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDM 611
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+++G D + Y + C R+ D L+ M ++G+ P++++Y I +
Sbjct: 612 F-DQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYG 670
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA----------------- 166
+ G + A ++ M E P+ T+S LI ++L NA
Sbjct: 671 RFGSIDGAFGILKRMHEVGCEPSYYTYSCLI------KHLSNAKPKEVSSSSELSDLSSG 724
Query: 167 ------------------LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
L L K G P+ T K + LC VG + A + +
Sbjct: 725 VASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHM 784
Query: 209 GEQGR----------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G+ LG R+L M LP++D+ +L+ + G
Sbjct: 785 KEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGND 844
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A VF +++ + + LI GL G D + +ME +G + Y+
Sbjct: 845 EKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIME--TQGCQIHPKTYS 902
Query: 313 SVLYGL 318
++ G
Sbjct: 903 MLIEGF 908
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 211/441 (47%), Gaps = 30/441 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + F T+I+GL +++ V D + P + +NSI++ + + D LA
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M V+ D +TY+ ++ LC + L M+++G+K + V YN+L+ LC
Sbjct: 216 LRK-MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK L+ DM PN +TF++L+ + KE L A L ++ + G P+++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R+ +A +L+ M R C P++ T+ LI
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDL-------------------MVRNKCSPDIVTFTSLI 375
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D + VF ++ G+ N VTY L++G C G+I ++ Q M G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHG 433
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +L GL + ++ALE + Q K+ V + I G C G VEDA
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNV+ Y +I C++ + EA+ L+++M G P T+NT++
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 422 CRQGNVGTALKLVEEDMRGIG 442
R G++ + KL+EE M+ G
Sbjct: 554 LRDGDLTASAKLIEE-MKSCG 573
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 233/499 (46%), Gaps = 43/499 (8%)
Query: 15 ITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMA 74
I + + + R+R + +V D F+ K FN +LD + K++
Sbjct: 73 IALFQEMIRSRPLPSLV---DFSRFFSAIARTKQFNLVLD-------------FCKQLEL 116
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ + YT I++ C + + +L + G +P++ +NTLI L GKV
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L+ M E P+ VT++ ++ C+ + AL LL K DV T + +++
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC G + A+ + +E +G + GK G LK+M + +P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV T+N+L+ + + G L A +++ +M GIS N +TY+TL+ G C R+ + +L
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
LM +K I + S++ G + D+ ++ + + K L AV S+ + GFC
Sbjct: 357 DLMVRNK--CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++ A+ F +M+ G +P+V+ Y L+ C ++ +A E+ +++
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ T++ G+C+ G V A L +G P Y+ +I LC+KG A++LL
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M G P+ T+N+L+
Sbjct: 532 RKMEEDGNAPNDCTYNTLI 550
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 147/326 (45%), Gaps = 59/326 (18%)
Query: 16 TVIRGLGRARMIND-VVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMM 73
+++RGL +A ND + D+VSR + P++ FN +LDV VKE + A Y K+M+
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQEANELY-KEMI 325
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + TY LM G C+ NR+ + +L +M P+ V + +LI C +V
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+ ++ + N VT+SIL+ +C+ + A L ++ S G +PDV+T +L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 190 ELLCSVGRVMDAVEILEE-SGEQGRLGKV----------KGG------------------ 220
+ LC G++ A+EI E+ + LG V KGG
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 221 -------------CR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
C+ L++ME G PN TYN LI ++ G L ++ +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSG 284
+MK G S + + +I L SG
Sbjct: 566 IEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 16/231 (6%)
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DD + + Q M S+ + ++ + R Q + L++ KQ+E + ++
Sbjct: 70 DDAIALFQEMIRSRPLPS--LVDFSRFFSAIARTKQFNLVLDFCKQLE---LNGIAHNIY 124
Query: 348 ILGFCVDGNVEDAKRCFD-----QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
L ++ K CF ++++ G P+ ++ LI E +V EA L+ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCE 461
+G P T+N++++G+CR G+ AL L+ + + R + YS +I +LC
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT----YSTIIDSLCR 240
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL-LLLLNEMVS 511
G +A L +M KGI +T+NSL+ L + W LLL +MVS
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 234/515 (45%), Gaps = 69/515 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED---IDLA 64
P + FI V+ + + + +K + F P++KI+N +LD L+ E +
Sbjct: 105 PCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMI 164
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A Y + M G++ + +TY +L+K LC ++ KLL M RG P+ V Y T++
Sbjct: 165 GAVY-ENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVA 223
Query: 125 SLCKNGKVGRARSLMSDMEEPNDVTF-SILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++C++G+V AR + V+ + LIC C+E + L+++ G P+VV
Sbjct: 224 AMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVV 283
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ + V+ L VG V A+ + LGK M R+GC PNV T++ L+
Sbjct: 284 SYSSVISWLSDVGEVELALAV---------LGK----------MIRRGCRPNVHTFSSLM 324
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
Y G + + ++ M ++G+ N V Y+TL+ GLC G +
Sbjct: 325 KGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNL---------------- 368
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGNVEDA 360
EA++ +MEK P S + GF G+++ A
Sbjct: 369 ---------------------AEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGA 407
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+++M+ G PNVV+Y ++ C+ +A L+ M G P TFNT + G
Sbjct: 408 SEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKG 467
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC G V A+++V++ R G LP + Y+ L+ L + A L+ ++ + +
Sbjct: 468 LCCGGRVLWAMRVVDQMQR---YGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKV 524
Query: 481 LPDYLTWNSLLICLSQ--QTTWLLLLLLNEMVSFV 513
+ +T+N+++ S + W+L +L +V+ V
Sbjct: 525 ELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGV 559
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 193/400 (48%), Gaps = 28/400 (7%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRK 70
S+ +I GL R + +V D + + P++ ++S++ L +++LA A
Sbjct: 248 SVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVL-G 306
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM+ G + + +T++ LMKG L RVG+G L VM GV+PN V+YNTL++ LC +G
Sbjct: 307 KMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSG 366
Query: 131 KVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ A + ME+ PN T+S L+ + K +L A + K + G P+VV
Sbjct: 367 NLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVY 426
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMER 229
T ++++LC A +++ G G+V R + +M+R
Sbjct: 427 TSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQR 486
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
GCLP+ TYN L+ L A ++ +++ + N VTY+T++ G S G+ +
Sbjct: 487 YGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEW 546
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSL 346
L++L M G K N V+Y + + A+++L ++ ++L P + +
Sbjct: 547 VLQVLGRM--LVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTS 604
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ G C +E+A ++M+ +G PN+ +D L+ +
Sbjct: 605 LLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGF 644
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+++I LD+ + + MKI+ I + ++ ++ + G D LK+ +
Sbjct: 75 TYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRI 134
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQD----EALEYLKQMEKLFPRAVDRSLKILGFCV 353
++ G K + YN +L L E+ A+ + E + P ++ + C
Sbjct: 135 KEF--GCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCK 192
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+G ++ A + +M + G VP+ V Y ++ A C++ RV EA E+ + G + S
Sbjct: 193 NGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEG---VVSV 249
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
N ++ GLCR+G VG L++E +G G P YS +I L + G + A +L
Sbjct: 250 CNALICGLCREGRVGEVFGLMDEM---VGNGVDPNVVSYSSVISWLSDVGEVELALAVLG 306
Query: 474 QMVGKGILPDYLTWNSLL 491
+M+ +G P+ T++SL+
Sbjct: 307 KMIRRGCRPNVHTFSSLM 324
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 218/495 (44%), Gaps = 40/495 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + T + +AR + K + + R + + +N ++ L + + AF
Sbjct: 242 PPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA-VEEAF 300
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++++M+ G+ D +TY LM GLC R+ + LL M G+KPN V+Y TL+
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K GK A ++++M +PN + + LI CK L A LL + G PD
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T +++ G K G L EM G LPN TY I+
Sbjct: 421 FTYHPLMQ------------------GHFQHYDK-DGAFELLNEMRNSGILPNAYTYGIM 461
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ C+ G A ++ +M +G+ N Y LI G G I + L+ M
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENM----- 516
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+K + P YNS++ GL + +EA EY Q++K L P S I G+C N
Sbjct: 517 -TKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRN 575
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A + QM+ G PN Y L+ Y + + S +++ M G G P +
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGI 635
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V+ L R N+ A ++ E + G +P YS LI LC+ + A LL +M
Sbjct: 636 VIRNLSRSENMEVAFMVLTEVEK---NGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Query: 477 GKGILPDYLTWNSLL 491
+G+ P + +N+L+
Sbjct: 693 KEGLEPGIVCYNALI 707
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 234/524 (44%), Gaps = 33/524 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + +I GL R+ + + + + + ++P + ++++ L K + A+A
Sbjct: 279 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALL 338
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M SG++ + YA L+ G + + F +L+ M S GV+PN ++Y+ LI LCK
Sbjct: 339 -DEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCK 397
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++GRA L+++M P+ T+ L+ + + + A LL + + G +P+ T
Sbjct: 398 IGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYT 457
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G +A +LEE +G + G + C L+ M
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT 517
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ LP++ YN LI G ++ A + + ++ G+ + TY LI G C ++
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLE 577
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDR 344
++LQ M +S G K Y +L G ++ N ++ L+ M +K P
Sbjct: 578 KADQLLQQMLNS--GLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDK--PDNHIY 633
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I N+E A ++ + G VP++ IY LI C+ + +A L+ EM
Sbjct: 634 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAK 693
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P +N ++ G CR G++ A + + + +G LP Y+ LI C+ G
Sbjct: 694 EGLEPGIVCYNALIDGFCRSGDISRARNVFDSIL---AKGLLPNCVTYTALIDGNCKNGD 750
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
A L M+ +GI PD +N L S L L E
Sbjct: 751 ITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTE 794
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 138/542 (25%), Positives = 248/542 (45%), Gaps = 67/542 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + ++ GL + + + D +S + P++ ++ +++D +KE A AF
Sbjct: 313 PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEG-KAAEAFD 371
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVG----------------------------- 98
+M+++GVQ + Y L++GLC ++G
Sbjct: 372 ILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHF 431
Query: 99 -----DG-FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDV 148
DG F+LL+ M++ G+ PN+ Y +I+ LC+NG+ A +L+ +M +PN
Sbjct: 432 QHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAF 491
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI + KE ++ A LE +PD+ +++ L +VGR+ +A E +
Sbjct: 492 MYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV 551
Query: 209 GEQGRL-------GKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G + G + G C+ L++M G PN DTY L+ Y ++
Sbjct: 552 QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDH 611
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ + M G + Y +IR L ++ +L +E K G + Y+
Sbjct: 612 EKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE--KNGLVPDLHIYS 669
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S++ GL + ++A+ L +M K L P V + I GFC G++ A+ FD ++ +
Sbjct: 670 SLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK 729
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PN V Y LI C+ + +A +L K+M G P A +N + +G ++ A
Sbjct: 730 GLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQA 789
Query: 431 LKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
L L EE RG SL +S L++ C++G Q LL M+ + I+P+ T +
Sbjct: 790 LFLTEEMFNRGYAHVSL-----FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVEN 844
Query: 490 LL 491
++
Sbjct: 845 VI 846
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 187/403 (46%), Gaps = 34/403 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ ++ +I G + I+ ++ + +++ N+ P L +NS++ L I+ A +
Sbjct: 488 PNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEY 547
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++ G+ D++TY+ L+ G C T + +LL M + G+KPN+ Y L+
Sbjct: 548 Y-AQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYF 606
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ + S++ M ++P++ + I+I + EN+ A ++L + G VPD+
Sbjct: 607 KSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLH 666
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ LC + + AV +L+E M ++G P + YN LI
Sbjct: 667 IYSSLISGLCKMADMEKAVGLLDE-------------------MAKEGLEPGIVCYNALI 707
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C +G + A +VF+ + G+ N VTY LI G C G I D + + M D
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIA 767
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR----SLKILGFCVDGNVED 359
+ YN + G ++AL +L E++F R S + GFC G +++
Sbjct: 768 PDAFV--YNVLATGCSDAADLEQAL-FLT--EEMFNRGYAHVSLFSTLVRGFCKRGRLQE 822
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ M++ VPN + +I + + ++ EA + E+
Sbjct: 823 TEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAEL 865
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 7/273 (2%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME G P+V TY+ + ++C+ D+A VF +M+ + N VTY+ +I GLC G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+++ + M D G Y +++ GL + + EA L +M L P V
Sbjct: 296 VEEAFGFKEEMVDY--GLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVY 353
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ + GF +G +A ++MI G PN ++YD LI C+ ++ AS+L+ EM
Sbjct: 354 ATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIK 413
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G+ P T++ ++ G + + A +L+ E MR G LP + Y +I LC+ G
Sbjct: 414 VGHRPDTFTYHPLMQGHFQHYDKDGAFELLNE-MR--NSGILPNAYTYGIMINGLCQNGE 470
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ A LL +M+ +G+ P+ + L+I S++
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE 503
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 4/119 (3%)
Query: 29 DVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
D+ A DL + P ++N +L + DL +A + + M + ++
Sbjct: 750 DITDAFDLYKDMLDRGIAPDAFVYN-VLATGCSDAADLEQALFLTEEMFNRGYAHVSLFS 808
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
L++G C R+ + KLLHVM R + PN+ +I K GK+ A + +++++
Sbjct: 809 TLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 222/474 (46%), Gaps = 30/474 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + F T+IRG+ I + + D + P + + ++++ L K A
Sbjct: 129 PDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL 188
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ Q + + Y ++ LC +V + F L M ++G+ P+ YN+LIH+LC
Sbjct: 189 LGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCN 248
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +L+++M + P+ V+F+ ++ A CKE + A +++K G P+VVT
Sbjct: 249 LCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVT 308
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C + + +AV++ + M KGC+PNV +YN LI+
Sbjct: 309 YTALMDGHCLLSEMDEAVKVFD-------------------TMVCKGCMPNVISYNTLIN 349
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A+ +F +M + + VTY TLI GLC R+ D + + M +
Sbjct: 350 GYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 409
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y +L L + EA+ LK +E L P ++ I G C G +E A+
Sbjct: 410 N--LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 467
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + +G P+V Y +I+ C+ + EAS+L +EM +G +NT+ G
Sbjct: 468 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 527
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
R A++L++E + RG + + +K L + G QS +L + V
Sbjct: 528 RNNETSRAIQLLQE---MVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFV 578
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 227/518 (43%), Gaps = 39/518 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+Q PP F ++ + + + + ++ + + F + P++ L +L+ L
Sbjct: 55 MQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYT----LHILINSFCHLN 110
Query: 65 RAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
R + K++ G Q D T+ L++G+ + ++G+ L M G +P+ V Y
Sbjct: 111 RVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYG 170
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI+ LCK G A L+ M +PN ++ +I + CK+ + A L + +
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD+ T ++ LC+ L + K L EM +P+V
Sbjct: 231 GISPDIFTYNSLIHALCN-------------------LCEWKHVATLLNEMVDSKIMPDV 271
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
++N ++ + C+ G + A DV + M G+ N VTY L+ G C +D+ +K+
Sbjct: 272 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDT 331
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M +G + YN+++ G + + D+A+ +M ++L P V S I G C
Sbjct: 332 M--VCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 389
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
++DA F +M+ +PN+V Y L+ C+ + EA L+K + G P
Sbjct: 390 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 449
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N + G+CR G + A L +G P YS +I LC +G AS L +
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLS---SKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506
Query: 475 MVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS 511
M G + +N++ L T + LL EMV+
Sbjct: 507 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVA 544
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 202/422 (47%), Gaps = 31/422 (7%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMA 74
T++R G A + N+ +K L+ ++PS+ FNS+L +L+K ++A + + +
Sbjct: 102 TLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGT 161
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
GV D YT+ IL++G C + V +GF+ M +P+ V YNTL+ LC+ GKV
Sbjct: 162 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRI 221
Query: 135 ARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +++ M + P+ VT++ L+ YC ++ + ALV+ E+ S G P+ +T +
Sbjct: 222 AHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTL 281
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ LC V + EI LG GG +G +P+ TYN L+++ C+
Sbjct: 282 IKGLCEVQKFDKIKEI---------LGGAVGG---------RGFVPDTCTYNTLMNAQCD 323
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-----KEG 303
G D AL +F MK + + TY LIR LC G + ++ + D +G
Sbjct: 324 AGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDG 383
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
++ YN + L + + +A +Q M+K I+G C +G E +
Sbjct: 384 CTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYK 443
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
M+ VP+ Y LI+ + Q+ A + ++ M YLP S F+++LS L
Sbjct: 444 LLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELL 503
Query: 423 RQ 424
+
Sbjct: 504 KN 505
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 189/451 (41%), Gaps = 70/451 (15%)
Query: 52 ILDVLVKE-DIDLARAF-YRKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+LD+L + ++++AR F + + ++G V+ +D L++ + KL +MK
Sbjct: 65 MLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMK 124
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALV 168
S GV P+ + +N+L+ L K G+ A S+ +M C
Sbjct: 125 SSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEM------------CG------------ 160
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
++G PD T ++ C + V G RF KEM
Sbjct: 161 ------TYGVTPDTYTFNILIRGFC-------------------KNSMVDEGFRFFKEMS 195
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDM--KIDGISWNFVTYDTLIRGLCSGGR 286
R C P+V TYN L+ C G + A +V M K+ +S + VTY TL+RG C
Sbjct: 196 RFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQE 255
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVD 343
ID+ L + + M G K YN+++ GL + D+ E L P
Sbjct: 256 IDEALVVFEEM--VSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCT 313
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ + C GN ++A + F +M E P+ Y LI CQ A +L +++
Sbjct: 314 YNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLS 373
Query: 404 GH-------GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
G P+ + +N + LC+ G A ++ + M+ G P Y LI
Sbjct: 374 DEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKK-GTQDPPS---YKTLI 429
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
C++G F++ LL+ M+ + +PD+ T+
Sbjct: 430 IGHCKEGTFEAGYKLLLFMLRRDYVPDFETY 460
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 24/298 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +IRG + M+++ + +SRFN P + +N+++D L + + +A
Sbjct: 166 PDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNV 225
Query: 68 YR---KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ KKM + D TY L++G C+ + + + M SRG+KPN + YNTLI
Sbjct: 226 VKGMVKKM--KDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIK 283
Query: 125 SLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC+ K + + ++ P+ T++ L+ A C N AL + +K
Sbjct: 284 GLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQ 343
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T + ++ LC G A ++ ++ ++ L + GC P V Y
Sbjct: 344 PDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDIL------------LRDDGCTPLVAAY 391
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
N + C+ G A VF + G + + +Y TLI G C G + G K+L M
Sbjct: 392 NPIFDFLCKNGKTHKAERVFRQLMKKG-TQDPPSYKTLIIGHCKEGTFEAGYKLLLFM 448
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 5/241 (2%)
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY-NS 313
A + FN +G + + +Y ++ L G ++ L +E GS + N+
Sbjct: 43 AFEFFNWASRNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNT 102
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+L +EA++ M+ + P + + +L G A FD+M
Sbjct: 103 LLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY 162
Query: 372 GV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
GV P+ ++ LI +C+ V E KEM+ P T+NT++ GLCR G V A
Sbjct: 163 GVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIA 222
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+V+ ++ + S P Y+ L++ C K A ++ +MV +G+ P+ +T+N+L
Sbjct: 223 HNVVKGMVKKMKDLS-PDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTL 281
Query: 491 L 491
+
Sbjct: 282 I 282
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 217/467 (46%), Gaps = 45/467 (9%)
Query: 48 IFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
++N +L ++E DL + Y K ++ SG D +T IL++ LC R+ ++
Sbjct: 117 VYNRLLLAALQEARFDLVESLY-KDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDA 175
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNA 166
M R N + L C+ G+ A ++ M N V + ++ +C+E + A
Sbjct: 176 MPER----NEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEA 231
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L+E+ G P+VVT + LC GRV+DA I + E+
Sbjct: 232 ERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEK--------------- 276
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ER P+ T+++++S +CE G++D A + + M+ G +Y+ + GL G
Sbjct: 277 WERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGM 336
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDR 344
+ + ++L+ M + EG + YN ++ GL +E + + +E + + P V
Sbjct: 337 VGEAQELLREM--AHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTY 394
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ + +C +GN A R D+M ++G PN Y+ L+ + + R+ EA L++ M+
Sbjct: 395 TSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSE 454
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVE----EDMRGIGR----------------G 444
GY ++ N ++ GLCR + A+ +V+ E +GR
Sbjct: 455 KGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKR 514
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP YS L+ ALC++G F A L++M+GK I PD + +++ +
Sbjct: 515 CLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFI 561
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 217/484 (44%), Gaps = 42/484 (8%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAF--YRKK 71
TV+ G R +++ + + + + P++ FN+ + L K +D R F ++K
Sbjct: 217 TVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEK 276
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
+ D T+ +++ G C V + L+ +M+ G YN + L +NG
Sbjct: 277 WERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGM 336
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
VG A+ L+ +M +PN T++I++ CKE + + + S PDVVT T
Sbjct: 337 VGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTS 396
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L CS G A IL+E M +KGC PN TYN+L+ S
Sbjct: 397 LLHAYCSEGNAAAANRILDE-------------------MAQKGCAPNSFTYNVLLQSLW 437
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G + A + M G S + + + +I GLC ++D + I+ M + + GR
Sbjct: 438 KAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGR 497
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ Y K + P + S + C +G ++AK+ +M
Sbjct: 498 LG---------YSFLSLLTDSSSSK---RCLPDRITYSTLVSALCKEGRFDEAKKKLLEM 545
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
I + P+ V+YD IH YC+ + A +++++M G P T+N ++ G + N
Sbjct: 546 IGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNS 605
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
LKL+ E M+ G+G P Y+ LIK+ CE+G A LL +M+ I+P+ ++
Sbjct: 606 DEILKLISE-MK--GKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSF 662
Query: 488 NSLL 491
L+
Sbjct: 663 ELLI 666
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 234/512 (45%), Gaps = 49/512 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD+ F ++ G A M+++ D++ ++ +N L LV+ +
Sbjct: 284 PDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQEL 343
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M GVQ + YTY I++ GLC + D K+ +KS + P+ V Y +L+H+ C
Sbjct: 344 LREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCS 403
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G A ++ +M + PN T+++L+ + K + A LLE+ G+ D +
Sbjct: 404 EGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTAS 463
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG----CRFLKEMERKGCLPNVDTYN 240
+++ LC ++ A++I++ +G L + G K CLP+ TY+
Sbjct: 464 CNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYS 523
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+S+ C+ G D A +M IS + V YDT I G C G+ +K+L+ ME
Sbjct: 524 TLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDME-- 581
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
K+G K YN +++G ++ DE L+ + +M+ + P + + I FC G V
Sbjct: 582 KKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVN 641
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ------EERVREAS-----------ELM-K 400
A D+M++ VPN+ ++ LI A+C+ +RV +AS LM
Sbjct: 642 KAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVLYSLMCT 701
Query: 401 EMTGHG-YLPIASTFNTVLS---------------GLCRQGNVGTALKLVEEDMRGIGRG 444
+++ +G +L + TVL GLC+ V +L++ M +G
Sbjct: 702 QLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMV---KG 758
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ P+I AL E+G Q ML +M+
Sbjct: 759 YSFDPAAFMPVIDALSERGKKQHVDMLSQKMM 790
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 225/491 (45%), Gaps = 42/491 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAFYRKKM 72
F +I A M V++ L+ F+ P L FN IL LV KE LA A Y +M
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVY-NQM 189
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ + D TY IL+ GLC T + D L M RG+ PN +IY+ ++ LC+ K+
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249
Query: 133 GRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A+ L S M + +T+++L+ +CK L +A LL+ G + V+ +
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCL 309
Query: 189 LELLCSVGRVMDA----VEILEESGEQGRL------------GKVKGGCRFLKEMERKGC 232
+ L R +A ++L E+ + + G+V L EM +G
Sbjct: 310 INGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGL 369
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ YN LI +C+ G LD A + ++ N TY LI G+C G I+
Sbjct: 370 RPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQH 429
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-----KLFPRAVDRSLK 347
I + ME K G + +NS++ GL + N+ +EA QME LF R + K
Sbjct: 430 IFKEME--KLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487
Query: 348 ILG----------FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
+ C G + A + Q+++ G +P++ Y+ LI+ +C+ + A +
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFK 547
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L KEM G++P + T+ T++ GL R G AL++ E+ ++ +G +P S Y ++
Sbjct: 548 LFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK---KGCVPESSTYKTIMT 604
Query: 458 ALCEKGGFQSA 468
C + A
Sbjct: 605 WSCRENNISLA 615
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 204/443 (46%), Gaps = 74/443 (16%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNG---KVGRARSLMSDME-EPNDVTFSILICA 156
+K+L +K+ +K +S ++ LI + + G K + SLM D + +P+ F++++
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHF 172
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
++E + AL + + PDVVT ++ LC + DA+ + +E
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDE--------- 223
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M +G LPN Y+I++S C+ + A +F+ M+ G + + +TY+
Sbjct: 224 ----------MTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
L+ G C G +DD +LQL+ +K+G + Y ++ GL+R + +EA + ++M
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLL--TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC------Q 388
E + P + ++ I G +G V +A +M E G P+ + Y+ LI +C +
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 389 EERVR-----------------------------EASELMKEMTGHGYLPIASTFNTVLS 419
E +R +A + KEM G LP TFN++++
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSL-----PGS------GHYSPLIKALCEKGGFQSA 468
GLC+ + A +L+ M + + SL G+ +++ LCE G A
Sbjct: 452 GLCKANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
LL+Q+V G+LPD T+N L+
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILI 533
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 7/260 (2%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+++I + + V ++K I + + LI G + ++ LM D
Sbjct: 97 DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K + +N +L+ L R+ AL QM K L P V + I G C
Sbjct: 157 FD--CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKT 214
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+DA FD+M + G +PN +IY ++ CQ +++ +A L +M G T+N +
Sbjct: 215 QDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
L+G C+ G + A L++ + G + G Y LI L ++ A M +M+
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKD---GHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 478 KGILPDYLTWNSLLICLSQQ 497
+ I PD + + ++ LSQ+
Sbjct: 332 ENIKPDVMLYTIMIRGLSQE 351
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 146/355 (41%), Gaps = 40/355 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD ++ +IRGL + + + + ++ + P +N+++ +D A +
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R ++ +++TY+IL+ G+C + + M+ G P+ V +N+LI+ LC
Sbjct: 396 -RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Query: 128 KNGKVGRARSLMSDME------------EPNDVTFSI-----LICAYCKEENLVNALVLL 170
K ++ AR L ME + D F I ++ C+ ++ A LL
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RL 214
+ G +PD+ T ++ C G + A ++ +E +G R
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G+ + ++M +KGC+P TY +++ C + AL V+ D W
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWE---- 630
Query: 275 DTLIRGLCSGGRIDD-GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
D +R + ++ I +L+E + ++PY L GL + + EA
Sbjct: 631 DEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAF 685
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 219/457 (47%), Gaps = 34/457 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSR--------FNMTPSLKIFNSILDVLVKED- 60
+E + +I GL +N+ V ++ + F + ++ +++ ++D L +
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+D FY +MM +GV +++TY L++GLC + +GF L+ M RG+ + ++
Sbjct: 201 VDEGFEFY-NEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259
Query: 121 TLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI LCKNG + AR + +M EPN VT + L+ YC + N+ A L + +
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
GF DV T + C VGRV DAV + +E +G + G+V G
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+K M R G P++ T IL+ C++ LD A+ +FN + G++ + +Y LI G
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHG 439
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
C+ R+ + + +L+ M + I Y+ ++ GL R + A L +M +
Sbjct: 440 CCTSRRMGEAMNLLRDMH--LKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + S+ + ++++A F+QMI+ G P+V+ Y +I YC+ ER+ EA L
Sbjct: 498 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINL 557
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+EM +P T+ + + + + G+ K V
Sbjct: 558 FREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVN 594
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 205/438 (46%), Gaps = 38/438 (8%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--------VKPNSVIY 119
+ +++ +G ++ +Y IL+ GLC RV + LL +++ VK N V+Y
Sbjct: 129 FHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMY 188
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+ +I LC+NG V ++M PN+ T+ LI C + L+++
Sbjct: 189 SIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIR 248
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G V T +++ LC G +++A E+ +E M +G PN
Sbjct: 249 RGLDVSVYVFTVLIDGLCKNGMLVEAREMFDE-------------------MVNRGYEPN 289
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ T L+ YC G +D A ++F+ + G + TY+ I G C GR+ D +++
Sbjct: 290 IVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFD 349
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
E +EG I YNS++ L + + A E +K M + L P V + + G C
Sbjct: 350 --EMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCK 407
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
++ A F+Q++E G P+V Y LIH C R+ EA L+++M +P T
Sbjct: 408 SKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVT 467
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ ++ GLCR G + A +L+ E +G LP + YS L+ AL +K A L
Sbjct: 468 YSCLIDGLCRSGRISNAWRLLNEMHV---KGPLPDTITYSILLDALWKKQHLDEAVFLFN 524
Query: 474 QMVGKGILPDYLTWNSLL 491
QM+ +G+ PD + + ++
Sbjct: 525 QMIKRGLEPDVMCYTIMI 542
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 174/402 (43%), Gaps = 57/402 (14%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILIC 155
V F + + RG ++V NT++ LC NG V +A
Sbjct: 87 HVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEF----------------- 129
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
+ +VN GF + V+ ++ LC GRV +AV +L ++
Sbjct: 130 ----HDEIVNN----------GFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKE 175
Query: 216 K----VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
K VKG NV Y+I+I C G +D + +N+M +G+ N
Sbjct: 176 KDGFFVKG---------------NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNE 220
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
TY +LIRGLC G+ +G ++ E + G + + ++ GL + EA E
Sbjct: 221 FTYGSLIRGLCGVGKFLEGFGLVD--EMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMF 278
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M P V + + G+C+ GNV+ A+ FD + E G +V Y+ IH YC+
Sbjct: 279 DEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKV 338
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
RVR+A + EM G +P T+N+++ LC+ G V A ++V+ R G P
Sbjct: 339 GRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRS---GLTPDI 395
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ LC+ A +L Q+V G+ PD ++ L+
Sbjct: 396 VTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 23/294 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + I G + + D V+ D + R + P++ +NS++D L K
Sbjct: 324 DVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIV 383
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M SG+ D T IL+ GLC + R+ L + + G+ P+ Y LIH C +
Sbjct: 384 KTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTS 443
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
++G A +L+ DM P+ VT+S LI C+ + NA LL + G +PD +T
Sbjct: 444 RRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITY 503
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ +L+ L + +AV + + M ++G P+V Y I+I
Sbjct: 504 SILLDALWKKQHLDEAVFLFNQ-------------------MIKRGLEPDVMCYTIMIDG 544
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
YC++ +D A+++F +M + + + VTY L + G K + ++ D
Sbjct: 545 YCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRD 598
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 137/540 (25%), Positives = 234/540 (43%), Gaps = 67/540 (12%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--------- 54
S+ PP+ + V+R L I D + D + R P +++ IL+
Sbjct: 108 SVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGG 167
Query: 55 -----VLVKED--------------------------IDLARAFYRKKMMASGVQGDDYT 83
V V +D +D A R + G D +
Sbjct: 168 GFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVS 227
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y ++KGLC+ R G L+ M G PN V +NTLI LC+NG R +++ M
Sbjct: 228 YNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMV 287
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ ++ ++ CKE +L A +L++ S+G P+VV VL+ LCS R
Sbjct: 288 DHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWE 347
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
A E+L E + + G V L++M GC+P+V TY +I
Sbjct: 348 QAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVI 407
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ G++D A+ + M G N ++Y +++GLCS R D ++ M ++G
Sbjct: 408 NGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQM--IEQG 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+N+V+ L ++ ++A+E LKQM P + S I G G ++A
Sbjct: 466 CSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL 525
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ M+ +G PN +IY + A +E R+ ++ + A +N V+S L
Sbjct: 526 ELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSL 585
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++G A++ + + G +P Y+ LI+ L +G + A +L ++ KG L
Sbjct: 586 CKRGGTDRAIEFLA---YMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGAL 642
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 206/430 (47%), Gaps = 24/430 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
+P S PD + V++GL A+ V + + R P++ FN+++ L +
Sbjct: 215 LPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNG 274
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ +M+ G D YA ++ G+C + ++L M S G+KPN V YN
Sbjct: 275 LFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYN 334
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T++ LC + +A L+++M + +DVTF+IL+ +C+ + + LLE+
Sbjct: 335 TVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEH 394
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-RLGKV------KGGCR------- 222
G VPDV+T T V+ C G + +AV +L+ G R + KG C
Sbjct: 395 GCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDA 454
Query: 223 --FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ +M +GC PN T+N +I+ C+ G+++ A+++ M ++G S + ++Y T+I G
Sbjct: 455 EDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDG 514
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
L G+ D+ L++L +M + +G Y+S+ L +E + + ++ ++ + R
Sbjct: 515 LGKAGKTDEALELLNVMVN--KGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIR 572
Query: 341 --AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
AV + I C G + A M+ G +PN Y LI E V+EA E+
Sbjct: 573 SDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEM 632
Query: 399 MKEMTGHGYL 408
+ E+ G L
Sbjct: 633 LTELCSKGAL 642
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 217/478 (45%), Gaps = 70/478 (14%)
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A R+ + V + YTY +++ LC R+ D +L M+ RG P +Y+ ++ +
Sbjct: 100 ASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEA 159
Query: 126 LCKNGKVGRARSLMSDMEEPN------DV-TFSILICAYCKEENLVN-ALVLLEK-SFSF 176
C G G RS + +++ + DV ++++ A C + V+ AL LL SF
Sbjct: 160 ACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSF 219
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PDVV+ VL+ LC R G+V+ ++EM R GC PNV
Sbjct: 220 GCDPDVVSYNAVLKGLCMAKR----------------WGRVQD---LMEEMVRVGCPPNV 260
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
T+N LI C G+ + V M G + + Y T++ G+C G ++ +IL
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVD 354
M G K + YN+VL GL + ++A E L +M D + IL FC +
Sbjct: 321 M--PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQN 378
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE------------------------- 389
G V +QM+E G VP+V+ Y +I+ +C+E
Sbjct: 379 GLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISY 438
Query: 390 ----------ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
ER +A +LM +M G P TFNTV++ LC++G V A++L+++ +
Sbjct: 439 TIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLL 498
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G P YS +I L + G A LL MV KG+ P+ + ++S+ LS++
Sbjct: 499 N---GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKE 553
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 204/459 (44%), Gaps = 42/459 (9%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y ++ G C ++ +L S V PN+ Y ++ +LC G++ A S++ +M
Sbjct: 86 YNAMVSGYCRAGQLASARRL---AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 144 E----PNDVTFSILICAYCKEENLV---NALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
P + +++ A C +A+ +L+ G DV VL +C G
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 197 RVMDAV---------------------EILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
+D +L+ R G+V+ ++EM R GC PN
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQD---LMEEMVRVGCPPN 259
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V T+N LI C G+ + V M G + + Y T++ G+C G ++ +IL
Sbjct: 260 VVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILD 319
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCV 353
M G K + YN+VL GL + ++A E L +M D + IL FC
Sbjct: 320 RM--PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQ 377
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+G V +QM+E G VP+V+ Y +I+ +C+E + EA L+K M G P +
Sbjct: 378 NGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTIS 437
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ VL GLC A L+ + I +G P ++ +I LC+KG + A LL
Sbjct: 438 YTIVLKGLCSAERWVDAEDLMSQ---MIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLK 494
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
QM+ G PD +++++++ L + T L LLN MV+
Sbjct: 495 QMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 533
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 148/344 (43%), Gaps = 21/344 (6%)
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL------GKVKGGCRF--LKEMERKGC---- 232
++ ++ LC+ GR +A L + +G V G CR L R
Sbjct: 52 LSALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVPV 111
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PN TY ++ + C G + AL V ++M+ G + Y ++ CS G
Sbjct: 112 PPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRS 171
Query: 293 ILQLMED-SKEGSKGRISPYNSVLYGLYRENQQ-DEALEYLKQMEKLF---PRAVDRSLK 347
+++++D G + N VL + + DEAL L+ + F P V +
Sbjct: 172 AVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAV 231
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G C+ + ++M+ G PNVV ++ LI C+ +++ +M HG
Sbjct: 232 LKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGC 291
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P + TVL G+C++G++ A ++++ R G P Y+ ++K LC ++
Sbjct: 292 TPDIRMYATVLDGVCKEGHLEVAHEILD---RMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMV 510
A LL +M D +T+N L+ Q + ++ LL +M+
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 218/473 (46%), Gaps = 33/473 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAFYRKKM 72
F ++ RA + ++ L+ + P + I N ++VLV +D A F ++M
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFA-ERM 223
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
GV+ D YTY L+KGLC RV D +++ VM G P+ + Y T++ LCK +V
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R L+ M P+ VT+++LI K + AL L +S F D V +
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 343
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR+ +A EI + EM KGC P+V TY+ ++ +C
Sbjct: 344 IVHSFCLNGRMAEAKEI-------------------VGEMISKGCQPDVVTYSTVVDGFC 384
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G LD A + M + N VT+ L+ GLC G+ + ++L E+ E
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEE--EWWTPS 442
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y+ V++G RE + E+ + + QM + FP V+ +L I C D +AK +
Sbjct: 443 DITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFME 502
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q +G NVV + +IH + ++ + A LM +M P T+ V+ L ++G
Sbjct: 503 QCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKG 562
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ A LVE + + RG LP Y +I CEKG + LL +M+ +
Sbjct: 563 RLKEATGLVE---KMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLAR 612
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 238/517 (46%), Gaps = 45/517 (8%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKA------TDLVSRFNMTPSLKIFNSILDVLVK 58
+ SPP +R + RA+ DV +A D R+ P ++F+ +L +L
Sbjct: 89 VLSPPQ-------VRAVLRAQARGDVRRAFEFFRWADRQWRYRHAP--EVFDEMLSLLSN 139
Query: 59 EDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+ D AR R M+ GV+ +A LM ++ ++LH+M+ G P+
Sbjct: 140 TRLHDPARRVVRL-MIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDIS 198
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKS 173
I N ++ L G+V +A M EP+ T++ LI C +V+A+ ++
Sbjct: 199 ICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVM 258
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GK 216
G PD ++ V+ LC RV + +L+ L G
Sbjct: 259 LQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGH 318
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
FL+E E K + Y+ ++ S+C G + A ++ +M G + VTY T
Sbjct: 319 ADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYST 378
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
++ G C G +D K+++ M K K + ++L GL + + EA E L + E+
Sbjct: 379 VVDGFCRIGELDQARKMMKHM--YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEE 436
Query: 337 LF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ P + S+ + GF +G ++++ QM+++G P V + LIHA C++ + E
Sbjct: 437 EWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAE 496
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A + M++ G F TV+ G RQG++ +AL L+ +DM R P Y+
Sbjct: 497 AKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLM-DDMYLSNRH--PDVVTYTV 553
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ AL +KG + A+ L+ +M+ +G+LP +T+ +++
Sbjct: 554 VVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 12/289 (4%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R ++ M R+G + + L+ SY G L SA+ V + M+ DG + + + + L
Sbjct: 148 RVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVL 207
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
GR+D L+ + M + G + + YN ++ GL + +A+E + M + P
Sbjct: 208 VVAGRVDKALEFAERMR--RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 265
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASEL 398
+ + C + VE+ + +M + G+ P+ V Y+ LIH + EA E
Sbjct: 266 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++E G + ++ ++ C G + A ++V E I +G P YS ++
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGE---MISKGCQPDVVTYSTVVDG 382
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT--WLLL 503
C G A ++ M P+ +T +LL +C +T+ W LL
Sbjct: 383 FCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELL 431
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 213/469 (45%), Gaps = 46/469 (9%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYR---------------KKMMASGVQGDDYTYAIL 87
T +L +F +L +K D+++ M A D +TY IL
Sbjct: 178 TDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGIL 237
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL----MSDME 143
+ C ++ + + + + G ++V YN +I + G++ A L M+
Sbjct: 238 VNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKES 297
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ T+++LI A CK + L AL L +++ G V DV T + +++ GR A+E
Sbjct: 298 VPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALE 356
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ M++ GC+P+ YN+LIS + G +D AL++ DM
Sbjct: 357 VF-------------------YNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMN 397
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
GI + TY+ +I L S GR + +M+ K + YN++L GL + +
Sbjct: 398 RKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPD--VVTYNTLLNGLKKLRR 455
Query: 324 QDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
DEA + +M+ K P I G +EDA ++++ G PN IY+
Sbjct: 456 TDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNA 515
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI +C+ +V + EL ++M P + T+ ++ G R+G+ A++L++E +R
Sbjct: 516 LISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR-- 573
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
G P Y+ LI++L G + A L +M+ KG PD T+++L
Sbjct: 574 -EGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 130/578 (22%), Positives = 225/578 (38%), Gaps = 136/578 (23%)
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV---------- 112
+A A Y K ++ +G+ D +T ++K +C R +LL ++ +GV
Sbjct: 1 MALATY-KHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTEC 59
Query: 113 --------------------------KPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
+P++V + +H LC+ +V +A +L DM E
Sbjct: 60 IQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETC 119
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVGRVMD 200
P+ V ++ LI YCK + AL + + G P+ V+ ++ LC + R D
Sbjct: 120 DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 179
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A+ + +E G RLG ++ R L M C + TY IL++
Sbjct: 180 ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVN 239
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI----------- 293
++C G + + DG + + V Y+ +I+G GR+ + ++
Sbjct: 240 AHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVP 299
Query: 294 --------------------LQLMEDSKE-----------------GSKGRISPYNSVLY 316
L L +++++ G GR + V Y
Sbjct: 300 DVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFY 359
Query: 317 GLY-------------------RENQQDEALEYLKQMEK--LFP--RAVDRSLKILGFCV 353
+ ++ + DEALE L+ M + + P R + + +L C
Sbjct: 360 NMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSC- 418
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G E A F M P+VV Y+ L++ + R EA +L EM + +P +T
Sbjct: 419 -GRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
F T++ L + G + AL E+ R + G P S Y+ LI C G L
Sbjct: 478 FGTLIDTLAKAGRMEDAL---EQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQ 534
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMV 510
M+ PD +T+ L++ S++ T + + LL EMV
Sbjct: 535 DMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 572
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
+ PD + T++ GL + R ++ D + P L F +++D L K
Sbjct: 435 KHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDA 494
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+++ G + Y Y L+ G C + +V G++L M P+S+ Y L+
Sbjct: 495 LEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLG 554
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+ G A L+ +M P T+++LI + + +A L ++ + GF PD
Sbjct: 555 FSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPD 614
Query: 182 VVTITKVLEL 191
+ T + + L
Sbjct: 615 MQTYSALPNL 624
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 221/509 (43%), Gaps = 60/509 (11%)
Query: 39 RFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRV 97
R P +K N IL +L +++ L +A +MM G++ TY ++ C V
Sbjct: 195 RNRFLPDVKNCNRILKILRDKNL-LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEV 253
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSIL 153
L+ M+ RG P+ V +N LI+ L K G++ +A+ L+ +M + + T++ L
Sbjct: 254 QRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPL 313
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
IC YCK+ LV AL L E+ + G P V + ++ C G++ DA + L + ++
Sbjct: 314 ICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNL 373
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
RLG + L E+ + N+ TYN LI C G L++AL
Sbjct: 374 MPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALK 433
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGG-------------------------------- 285
+ DM GI + VTY L+ G C G
Sbjct: 434 LKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGEL 493
Query: 286 RIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
++ D K +L E+ +G + YN + GL + +EA E L++M + P V
Sbjct: 494 KLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHV 553
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ + +G++ + + F M+ G P VV Y LIHA+ R+ A EM
Sbjct: 554 TYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEM 613
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G +P T+N +++G C+ + A K E +G P Y+ LI C
Sbjct: 614 QEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQE---KGIFPNKYTYTILINENCNM 670
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G +Q A L QM+GK I PD T +LL
Sbjct: 671 GKWQEALRLYAQMLGKRIRPDSCTHGALL 699
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 200/449 (44%), Gaps = 25/449 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P E F +I GL + + +++ + S +N ++ K+ + +
Sbjct: 270 PSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALAL 329
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ GV ++ +M G C ++ D + L M + + P+ + YNTLI+ C+
Sbjct: 330 WEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCR 389
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +G A L+ ++ N VT++ LI C+ +L AL L E + G PDVVT
Sbjct: 390 LGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVT 449
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T ++ C +G ++ A E +E G +LG + +EM
Sbjct: 450 YTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEML 509
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P+V TYN+ ++ C+ G L+ A ++ M DG + VTY + + G +
Sbjct: 510 TKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLR 569
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+G +I M G + Y +++ + D A+ Y +M++ + P + ++
Sbjct: 570 EGREIFYDM--LSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNV 627
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I GFC ++ A + F +M E+G PN Y LI+ C + +EA L +M G
Sbjct: 628 LINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVE 435
P + T +L L + V A++ +E
Sbjct: 688 IRPDSCTHGALLKKLDKDYKV-QAVQFIE 715
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 163/330 (49%), Gaps = 30/330 (9%)
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L++ EK F+PDV ++L++L ++ A+E+ GE G
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYG-------------- 232
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
P V TYN ++ S+C+ G + ALD+ M+ G + VT++ LI GL G
Sbjct: 233 -----IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGE 287
Query: 287 IDDGLKILQLMEDSKEGSKGRISPY--NSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
+ ++Q E +K G R+SPY N ++ G ++ EAL ++M + P
Sbjct: 288 LQQAKGLIQ--EMAKAGL--RVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVA 343
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ + GFC +G + DA++ M+++ +P+++ Y+ LI+ +C+ + EA L+ E+
Sbjct: 344 SHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDEL 403
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
T+NT++ GLCR G++ TALKL +EDM I RG P Y+ L+ C+
Sbjct: 404 RFRNLSFNIVTYNTLIDGLCRLGDLETALKL-KEDM--INRGIHPDVVTYTVLVNGACKL 460
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
G A +M+ G+ PD + + ++
Sbjct: 461 GNMLMAKEFFDEMLHVGLAPDQFAYTARIV 490
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 155/350 (44%), Gaps = 28/350 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + T+I G R I + D + N++ ++ +N+++D L + D++ A
Sbjct: 375 PDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKL 434
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ M+ G+ D TY +L+ G C + + M G+ P+ Y I
Sbjct: 435 -KEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGEL 493
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G +A L +M P+ +T+++ + CK NL A LL+K G VPD V
Sbjct: 494 KLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHV 553
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T T + G + + EI + +G+ G++ + EM
Sbjct: 554 TYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEM 613
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ KG +PNV TYN+LI+ +C+ +D A F +M+ GI N TY LI C+ G+
Sbjct: 614 QEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKW 673
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ L++ M RI P + L ++ +D ++ ++ +E L
Sbjct: 674 QEALRLYAQMLGK------RIRPDSCTHGALLKKLDKDYKVQAVQFIESL 717
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/539 (25%), Positives = 241/539 (44%), Gaps = 62/539 (11%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--------- 54
++ PP+ + V+R L I D + D + R P +++ IL+
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174
Query: 55 --VLVKEDI-----------------------DLARAFYRKKMMAS-GVQGDDYTYAILM 88
V V ED+ + +A + + + S G + D +Y ++
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL 234
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
KGLC+ R G +L+ M PN V +NTLI LC+NG R +++ M E
Sbjct: 235 KGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCT 294
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ ++ +I CKE +L A +L + S+G P+VV +L+ LCS R + E+
Sbjct: 295 PDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEEL 354
Query: 205 LEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
L E ++ + G V L++M GC+P+V TY +I+ +C+
Sbjct: 355 LAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCK 414
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G++D A+ + M G N ++Y +++GLCS R D ++ M ++G
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM--IQQGCPLNP 472
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
+N+++ L ++ ++A+E LKQM P + S I G G ++A +
Sbjct: 473 ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 532
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+ +G PN +IY + A +E R+ + ++ + A +N V+S LC++G
Sbjct: 533 MVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGE 592
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A++ + + G +P Y+ LI+ L +G + A +L ++ KG L +L
Sbjct: 593 TERAIEFLA---YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 648
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 212/451 (47%), Gaps = 27/451 (5%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ A V + YTY +++ LC R+ D +L M RG P +Y+ ++ + C+
Sbjct: 110 RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 169
Query: 129 NGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G A ++ D+ DV ++++ A C + ++ AL LL SFG PDVV+
Sbjct: 170 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVS 229
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
VL+ LC R E++EE R G + L +M
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMA 289
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC P++ Y +I C+ G L A ++ N M G+ N V Y+TL++GLCS R +
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 349
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ ++L M D K+ ++ +N ++ + D +E L+QM P + +
Sbjct: 350 ETEELLAEMFD-KDCPLDDVT-FNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTT 407
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I GFC +G +++A M G PN + Y ++ C ER +A +LM +M G
Sbjct: 408 VINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQG 467
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
TFNT+++ LC++G V A++L+++ + G P YS +I L + G
Sbjct: 468 CPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN---GCSPDLISYSTVIDGLGKAGKTD 524
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A LL MV KG+ P+ + ++S+ LS++
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSRE 555
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 184/402 (45%), Gaps = 29/402 (7%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVT-FSILICAYCKEENLVNALVLLEKSFSFGF 178
++LI SLC G+ A +S V ++ ++ YC+ L +A L + +
Sbjct: 62 SSLIRSLCAAGRTAEAARALSAAGGGAGVVAYNAMVAGYCRAGQLESARRL---AAAVPV 118
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
P+ T V+ LC+ GR+ DA+ +L+E +G R G + R
Sbjct: 119 PPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVR 178
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+++ +GC +V N+++++ C+ G +D AL + D+ G + V+Y+ +++GLC
Sbjct: 179 VLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLC 238
Query: 283 SGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
R + +LME+ + I +N+++ L R + E L QM + P
Sbjct: 239 MAKRWG---CVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTP 295
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ I G C +G+++ A ++M G PNVV Y+ L+ C ER E EL+
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
EM TFN ++ C+ G V ++L+E+ + G +P Y+ +I
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLV---HGCMPDVITYTTVINGF 412
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
C++G A MLL M G P+ +++ +L L W+
Sbjct: 413 CKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 218/473 (46%), Gaps = 33/473 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAFYRKKM 72
F ++ RA + ++ L+ + P + I N ++VLV +D A F ++M
Sbjct: 165 FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFA-ERM 223
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
GV+ D YTY L+KGLC RV D +++ VM G P+ + Y T++ LCK +V
Sbjct: 224 RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKRV 283
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R L+ M P+ VT+++LI K + AL L +S F D V +
Sbjct: 284 EEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSA 343
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR+ +A EI + EM KGC P+V TY+ ++ +C
Sbjct: 344 IVHSFCLNGRMAEAKEI-------------------VGEMISKGCQPDVVTYSTVVDGFC 384
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G LD A + M + N VT+ L+ GLC G+ + ++L E+ E
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEE--EWWTPS 442
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y+ V++G RE + E+ + + QM + FP V+ +L I C D +AK +
Sbjct: 443 DITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFME 502
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
Q +G NVV + +IH + ++ + A LM +M P T+ V+ L ++G
Sbjct: 503 QCQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKG 562
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ A LVE + + RG LP Y +I CEKG + LL +M+ +
Sbjct: 563 RLKEATGLVE---KMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLAR 612
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 237/515 (46%), Gaps = 45/515 (8%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKA------TDLVSRFNMTPSLKIFNSILDVLVKED 60
SPP +R + RA+ DV +A D R+ P ++F+ +L +L
Sbjct: 91 SPPQ-------VRAVLRAQARGDVRRAFEFFRWADRQWRYRHAP--EVFDEMLSLLSNTR 141
Query: 61 I-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ D AR R M+ GV+ +A LM ++ ++LH+M+ G P+ I
Sbjct: 142 LHDPARRVVRL-MIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISIC 200
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N ++ L G+V +A M EP+ T++ LI C +V+A+ ++
Sbjct: 201 NMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQ 260
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVK 218
G PD ++ V+ LC RV + +L+ L G
Sbjct: 261 NGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHAD 320
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
FL+E E K + Y+ ++ S+C G + A ++ +M G + VTY T++
Sbjct: 321 EALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVV 380
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
G C G +D K+++ M K K + ++L GL + + EA E L + E+ +
Sbjct: 381 DGFCRIGELDQARKMMKHM--YKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEW 438
Query: 339 --PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P + S+ + GF +G ++++ QM+++G P V + LIHA C++ + EA
Sbjct: 439 WTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAK 498
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+ M++ G F TV+ G RQG++ +AL L+ +DM R P Y+ ++
Sbjct: 499 DFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLM-DDMYLSNRH--PDVVTYTVVV 555
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
AL +KG + A+ L+ +M+ +G+LP +T+ +++
Sbjct: 556 DALGKKGRLKEATGLVEKMLNRGVLPTPVTYRTVI 590
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 12/289 (4%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R ++ M R+G + + L+ SY G L SA+ V + M+ DG + + + + L
Sbjct: 148 RVVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVL 207
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
GR+D L+ + M + G + + YN ++ GL + +A+E + M + P
Sbjct: 208 VVAGRVDKALEFAERMR--RVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPP 265
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASEL 398
+ + C + VE+ + +M + G+ P+ V Y+ LIH + EA E
Sbjct: 266 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++E G + ++ ++ C G + A ++V E I +G P YS ++
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGE---MISKGCQPDVVTYSTVVDG 382
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT--WLLL 503
C G A ++ M P+ +T +LL +C +T+ W LL
Sbjct: 383 FCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELL 431
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 151/584 (25%), Positives = 259/584 (44%), Gaps = 117/584 (20%)
Query: 6 QSPPDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-I 61
++PP ++ ++R GR ++ + K D+V+ ++P FN ++ +L +
Sbjct: 16 ENPPSIYLYNVLLRSCTKEGRVDCVSWLCK--DMVAS-GVSPETYTFNVLIGLLCDSGCL 72
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D AR + KM G + ++Y++ IL++G C G +LL M+ G PN V+YNT
Sbjct: 73 DDARELF-DKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNT 131
Query: 122 LIHSLCK-----------------------------------NGKVGRARSLMSDME--- 143
LI S CK +GKV A + DM+
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191
Query: 144 -----EPNDVTFSILICAYCKE----------------ENLVN----------------- 165
+PN +T+++++ +CKE ENL+N
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251
Query: 166 --ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--------- 214
A ++L++ G P+V + V++ LC G + DA ++ G L
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311
Query: 215 -------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
GKV L+EM R GC PN T NIL+ S + G + A ++ M G
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGY 371
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ VT + +I GLC+ G++D ++I+ M + G + NS + GL ++
Sbjct: 372 VIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLG--NSYI-GLVDDSDS--- 425
Query: 328 LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+K P + S I G C G V +AK+ F +M+ + P+ IYD IH++C
Sbjct: 426 ------RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFC 479
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+E ++ A ++K+M G T+N+++ GL + + L++E MR RG P
Sbjct: 480 KEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDE-MRE--RGVSP 536
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ ++ +LCE G + A +L +M+ KGI P+ +++ L+
Sbjct: 537 DVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILI 580
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 233/531 (43%), Gaps = 85/531 (16%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ ++N +L KE ++ K M+ASGV + YT+ +L+ LC + + D +L
Sbjct: 19 PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
M +G +PN + L+ C+ G + L+ +M PN V ++ LI ++CK
Sbjct: 79 FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
E +A L+++ G PDVVT + LCS G+V++A I + LG +
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ- 197
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-------------- 265
PN+ TYN+++ +C+ G+L+ A +F MK+
Sbjct: 198 --------------PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLL 243
Query: 266 ---------------------GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
G+ N +Y+ ++ GLC G + D +++LM S G
Sbjct: 244 GLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS--GV 301
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y ++L+G + EA L++M + P ++ + +G + +A+
Sbjct: 302 LPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEE 361
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY--------------- 407
+M E+G V + V + +I C ++ +A E++ M HG
Sbjct: 362 LLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVD 421
Query: 408 --------LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+P +++T++SGLC+ G VG A K E M G+ P S Y I +
Sbjct: 422 DSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMM---GKNLQPDSAIYDVFIHSF 478
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL-SQQTTWLLLLLLNEM 509
C++G SA +L M KG T+NSL++ L S+ + + L++EM
Sbjct: 479 CKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEM 529
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 202/460 (43%), Gaps = 58/460 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
M P++ +N ++D L K + + M +SGV D TY L+ G C T +V +
Sbjct: 266 MEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEAN 325
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAY 157
+L M G PN+ N L++SL K G++ A L+ M E + VT +I+I
Sbjct: 326 NVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGL 385
Query: 158 CKEENLVNALVLLEKSFSFGF-----------------------VPDVVTITKVLELLCS 194
C L A+ ++ ++ G +PD+++ + ++ LC
Sbjct: 386 CNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCK 445
Query: 195 VGRVMDA----VEILEESGEQG------------RLGKVKGGCRFLKEMERKGCLPNVDT 238
GRV +A +E++ ++ + + GK+ R LK+ME+KGC + T
Sbjct: 446 AGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQT 505
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN LI + + ++M+ G+S + Y+ ++ LC GGR+ D +L M
Sbjct: 506 YNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEM- 564
Query: 299 DSKEGSKGRISPYNSVLYGLYRE---NQQDE----ALEYLKQMEKLFPRAVDRSLKILGF 351
++G IS ++ ++ + + DE AL E L+ SL
Sbjct: 565 -LQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALY------SLTFNEL 617
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
V G V AK F+ ++ +Y LI C++E++ +AS ++ ++ GY
Sbjct: 618 LVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDP 677
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
++F V+ GL ++GN A +L E+ M G + H
Sbjct: 678 ASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKVKNKVH 717
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/429 (28%), Positives = 205/429 (47%), Gaps = 28/429 (6%)
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
Y Y LM LC+ +V D LL M RG P+ V YN L+ + CK +A L+
Sbjct: 153 YAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDL 212
Query: 142 ME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M P +VT+++++ C+E ++ A LL S+G P+ V VL+ L + GR
Sbjct: 213 MRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGR 272
Query: 198 VMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
D E++ E + + G + R L++M + C N+ TYN
Sbjct: 273 WEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNA 332
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++S CE G +D AL + ++M+ DG N TY+ L++GLC+ R +D ++ M S+
Sbjct: 333 VVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKM--SQ 390
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
I +N+++ L ++ +A+E KQM + P +V S I G G +E
Sbjct: 391 TDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQ 450
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
+ ++M +G P + Y L +E+++ EA +++ ++ G P A +NT+L
Sbjct: 451 SLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILL 509
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLCR G A+ ++ + G +P YS LI+ L +G + A LL + +
Sbjct: 510 GLCRNGKTDQAIDILSN---MVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRD 566
Query: 480 ILPDYLTWN 488
++ D L N
Sbjct: 567 VIVDNLIKN 575
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 192/409 (46%), Gaps = 40/409 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + ++ + R ++ DL+ TP+ +N I+D + +E D+D AR
Sbjct: 185 PDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYAREL 244
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + G + Y ++KGL R D +L+ M S P+ + +I SLC
Sbjct: 245 L-NSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLC 303
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G RA L+ M + N VT++ ++ C++ ++ AL LL + G P++
Sbjct: 304 QEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIF 363
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ LC+ R DA ++ + +M + CLP++ T+N +I
Sbjct: 364 TYNILVKGLCNAERWEDAEDL-------------------MAKMSQTDCLPDILTFNTII 404
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G+ A++VF M G N VTY ++I GL G+++ L++L M G
Sbjct: 405 GFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEM-----G 459
Query: 304 SKGRISPYNSVLYGLYRE--NQQDEALEYLKQMEKL-----FPRAVDRSLKILGFCVDGN 356
SKG +P + Y L E N++D+ +E ++ + KL P+AV + +LG C +G
Sbjct: 460 SKG-FNP--EINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGK 516
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ A M+ +G +P+ Y LI E ++EA EL+ ++
Sbjct: 517 TDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR 565
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 156/344 (45%), Gaps = 20/344 (5%)
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----GKVKGGC 221
AL ++E S PDV +++ LC GR DA ++E G G C
Sbjct: 75 ALRVVESSLC---PPDVALANRLVRDLCRRGRPADAARVVEACGSAATAVTYSALADGYC 131
Query: 222 RF--LKEMER----KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
R L E R LP+ YN L+ + C G + AL + ++M G + + VTY+
Sbjct: 132 RVGRLDEARRVVDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYN 191
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
L+ C G ++++ LM EG YN ++ G+ RE D A E L +
Sbjct: 192 ILLEAACKGRGYRQAMELIDLMR--VEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLP 249
Query: 336 KL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
P V+ + + G G ED + +M E P+ +I + CQE +
Sbjct: 250 SYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQ 309
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
A L+++M+ H T+N V+SGLC QG+V AL L+ +M+ G P Y+
Sbjct: 310 RAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLS-NMQT--DGCKPNIFTYN 366
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+K LC ++ A L+ +M LPD LT+N+++ L Q+
Sbjct: 367 ILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQK 410
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 133/294 (45%), Gaps = 24/294 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP E+ VI L + + ++ + +S+ + T ++ +N+++ L ++ +
Sbjct: 289 PPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALY 348
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G + + +TY IL+KGLC R D L+ M P+ + +NT+I LC
Sbjct: 349 LLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLC 408
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G +A + M E PN VT+S +I K + +L LL + S GF P+ +
Sbjct: 409 QKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE-I 467
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ E L ++++A++++ +++ G P YN ++
Sbjct: 468 NYHLLAECLNEEDKLVEAIQMVH-------------------KLQDTGISPQAVLYNTIL 508
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
C G D A+D+ ++M DG + TY LI+GL G + + ++L +
Sbjct: 509 LGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+SS G LD+AL V ++ + + L+R LC GR D ++++
Sbjct: 63 LSSLVHRGELDAALRV---VESSLCPPDVALANRLVRDLCRRGRPADAARVVEAC----- 114
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
GS Y+++ G R + DEA + M + P A + + CV G V DA
Sbjct: 115 GSAATAVTYSALADGYCRVGRLDEARRVVDGM-PVLPSAYAYNPLMHALCVRGQVRDALV 173
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
D M+ G P+VV Y+ L+ A C+ R+A EL+ M G P T+N ++ G+C
Sbjct: 174 LLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMC 233
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R+G+V A +L+ G P + +Y+ ++K L G ++ L+ +M + P
Sbjct: 234 REGDVDYARELLNS---LPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPP 290
Query: 483 DYLTWNSLLICLSQQ 497
T + ++ L Q+
Sbjct: 291 SEATLSVVISSLCQE 305
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 197/395 (49%), Gaps = 48/395 (12%)
Query: 108 KSRGVKPNSV---IYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKE 160
++ G P SV + ++ LCK+G+V AR L+ DM N + ++ L+ Y ++
Sbjct: 3 RALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQ 62
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG--KVK 218
++ GRV + +EI+E G + +G
Sbjct: 63 KD--------------------------------DGRVQEILEIMENEGIEATVGDGTCG 90
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
G + L E G PN TY +LI+ +C+ G +++A + DM+ G+ N + ++T+I
Sbjct: 91 GPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMI 150
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL- 337
G C G +DD LKI ME K G + I YN++ GL R N+ DEA L M ++
Sbjct: 151 DGYCRKGMVDDALKIKAAME--KMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 208
Query: 338 -FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V + I C DG++ +A+R F +M E+G P+VV Y+ +IH Y ++ +REA
Sbjct: 209 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAE 268
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
KEM G++P T+ +++ G C G V ALKL EE + RG+ P Y+ LI
Sbjct: 269 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQ---RGTEPNVVAYTALI 325
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L ++G ++A L M+ G++PD +++L+
Sbjct: 326 SGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 360
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 173/370 (46%), Gaps = 54/370 (14%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P S+ SP S+ V+ GL ++ ++D + D + R ++ + +NS+LD V++
Sbjct: 9 PGSV-SPLAASV---VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKD 64
Query: 62 DLARAFYRKKMM-------------------------ASGVQGDDYTYAILMKGLCLTNR 96
D R ++M +GV+ ++ TY +L+ G C +
Sbjct: 65 D-GRVQEILEIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQ 123
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
+ LL M+ +GV N +I+NT+I C+ G V A + + ME E + T++
Sbjct: 124 MEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNT 183
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L C C+ L A LL G VP+ VT T ++ + C G +++A + E E+G
Sbjct: 184 LACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKG 243
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ G ++ RF KEME+KG +P+V TY L+ +C G +D AL
Sbjct: 244 ATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVAL 303
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVL 315
+F +MK G N V Y LI GL GR + QL +D K G S Y++++
Sbjct: 304 KLFEEMKQRGTEPNVVAYTALISGLAKEGRSE---AAFQLYDDMLKAGLIPDDSLYSALV 360
Query: 316 YGLYRENQQD 325
L+ +N++D
Sbjct: 361 GSLHTDNRKD 370
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 164/367 (44%), Gaps = 51/367 (13%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
++++ GLC + RV D +LL M GV N++ YN+L+ + GR + ++ ME
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 77
Query: 144 ---------------------------EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
EPN+ T+ +LI +CK + A +LL
Sbjct: 78 EGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 137
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G + + +++ C G V DA+ K+K ME+ G ++
Sbjct: 138 GVGLNQIIFNTMIDGYCRKGMVDDAL-------------KIKAA------MEKMGVELDI 178
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN L C LD A + + M G+ N+VTY TLI C G + + ++ +
Sbjct: 179 YTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFRE 238
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M +++G+ + YN +++G ++ EA + K+MEK P + + G CV+
Sbjct: 239 M--AEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVN 296
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G V+ A + F++M + G PNVV Y LI +E R A +L +M G +P S +
Sbjct: 297 GKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLY 356
Query: 415 NTVLSGL 421
+ ++ L
Sbjct: 357 SALVGSL 363
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 227/513 (44%), Gaps = 34/513 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
SPP E T+I L +AR + VV + + P +++ + V + A
Sbjct: 38 SPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTH-HPSFA 96
Query: 67 FYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR--GVKPNSVIYNTLI 123
F +M G + Y +++KG C + + L MK V P+ V YNTL+
Sbjct: 97 FSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLV 156
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ CK ++ AR L M++ PN VT+S+LI YCK + L LLE+ G
Sbjct: 157 NGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGL 216
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCR 222
DV + ++ C G + E+ +E + GR G+ +
Sbjct: 217 KADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASE 276
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
LK+M +G P+V Y +L C+ G A+ V + M G +TY+ ++ GLC
Sbjct: 277 MLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLC 336
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF-- 338
R+DD ++++M K+G K YN++L GL + EA++ K + EK
Sbjct: 337 KEDRMDDAFGVVEMM--VKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVK 394
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + I G C +G V DA R M+E G N+V Y+ LI Y ++ EA +L
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKL 454
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
K G+ P + T++ +++GLC+ + A L + G P Y+ L+ +
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLF---CKMKDSGIRPTVIDYNALMTS 511
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC + + A L +M D +++N ++
Sbjct: 512 LCREDSLEQARSLFQEMRNVNHNVDVVSFNIII 544
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 235/505 (46%), Gaps = 38/505 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFN-----MTPSLKIFNSILDVLVK-EDIDLARAFYRK 70
V++G R+ + KA L S+ + P +N++++ K + + AR +
Sbjct: 118 VLKGFCRSGQCD---KAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEA 174
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+ + TY++L+ C + VG+G LL M+ G+K + +Y++LI + C G
Sbjct: 175 MKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEG 234
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ R L +M PN VT+S L+ + A +L+ + G PDVV T
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294
Query: 187 KVLELLCSVGRVMDAVEIL-------EESGEQGRLGKVKGGCR---------FLKEMERK 230
+ + LC GR DA+++L EE G V G C+ ++ M +K
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGLCSGGRID 288
G P+ TYN L+ C G + A+D++ + + + + T + LI+GLC GR+
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK-QMEKLF-PRAVDRSL 346
D +I M + G +G I YN ++ G + EAL+ K +E F P ++ S+
Sbjct: 415 DAARIHSSMVEM--GLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSV 472
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C + A+ F +M + G P V+ Y+ L+ + C+E+ + +A L +EM
Sbjct: 473 MINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVN 532
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ +FN ++ G + G+V +A +L+ E +P + +S LI + G
Sbjct: 533 HNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFM---MDLVPDAVTFSILINRFSKLGMLD 589
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A L +MV G +P + ++SLL
Sbjct: 590 EAMGLYEKMVSCGHVPGVVVFDSLL 614
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 218/458 (47%), Gaps = 30/458 (6%)
Query: 48 IFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
+++S++ E DI+ R + +M+ V + TY+ LM+GL T R + ++L
Sbjct: 222 VYSSLISAFCGEGDIETGRELF-DEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKD 280
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M +RGV+P+ V Y L LCKNG+ G A ++ M EEP +T+++++ CKE+
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ +A ++E G PD VT +L+ LC G++ +A+++ +
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWK---------------- 384
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L E+ P+V T N LI C+ G + A + + M G+ N VTY+ LI G
Sbjct: 385 -LLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYL 443
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
+ ++ + LK+ + +S G Y+ ++ GL + A +M+ + P
Sbjct: 444 AARKLIEALKLWKYAVES--GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPT 501
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+D + + C + ++E A+ F +M +VV ++ +I + V+ A EL+
Sbjct: 502 VIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLS 561
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM +P A TF+ +++ + G + A+ L E + + G +PG + L+K
Sbjct: 562 EMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYE---KMVSCGHVPGVVVFDSLLKGYG 618
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
KG + LL QM K ++ D +++L CL +
Sbjct: 619 LKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMS 656
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 156/392 (39%), Gaps = 95/392 (24%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + GL + D +K DL+ + P +N +++ L KED + AF
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED-RMDDAFG 346
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHS 125
+MM G + D TY L+KGLC ++ + L ++ S VKP+ N LI
Sbjct: 347 VVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQG 406
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK G+V A + S M E N VT++ LI Y L+ AL L + + GF P+
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPN 466
Query: 182 VVTITKVLELLC-----SVGR--------------VMDAVEIL-----EESGEQGR---- 213
+T + ++ LC SV R V+D ++ E+S EQ R
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQ 526
Query: 214 -----------------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
G VK L EM +P+ T++ILI+ + + G
Sbjct: 527 EMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLG 586
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRG------------------------------ 280
+LD A+ ++ M G V +D+L++G
Sbjct: 587 MLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTS 646
Query: 281 -----LCSGGRIDDGLKIL-QLMEDSKEGSKG 306
LC R D KIL + + S+ SKG
Sbjct: 647 TILACLCHMSRNLDVEKILPKFSQQSEHTSKG 678
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 240/540 (44%), Gaps = 64/540 (11%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--------- 54
++ PP+ + V+R L I D + D + R P +++ IL+
Sbjct: 115 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 174
Query: 55 --VLVKED-------------------------IDLARAFYRKKMMASGVQGDDYTYAIL 87
V V ED +D A R + + G + D +Y +
Sbjct: 175 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD-LPSFGCEPDVVSYNAV 233
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--- 144
+KGLC+ R G +L+ M PN V +NTLI LC+NG R +++ M E
Sbjct: 234 LKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGC 293
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ ++ +I CKE +L A +L + S+G P+VV +L+ LCS R + E
Sbjct: 294 TPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 353
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L E ++ + G V L++M +GC+P+V TY +I+ +C
Sbjct: 354 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFC 413
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G++D A+ + M G N ++Y +++GLCS R D ++ M ++G
Sbjct: 414 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM--IQQGCPLN 471
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+N+++ L ++ ++A+E LKQM P + S I G G ++A +
Sbjct: 472 PITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLN 531
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M+ +G PN +IY + A +E R+ + ++ + A +N V+S LC++G
Sbjct: 532 VMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRG 591
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A++ + + G +P Y+ LI+ L +G + A +L ++ KG L +L
Sbjct: 592 ETERAIEFLA---YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 648
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 215/451 (47%), Gaps = 33/451 (7%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ A V + YTY +++ LC R+ D +L M RG P +Y+ ++ + C+
Sbjct: 110 RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 169
Query: 129 NGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G A ++ D+ DV ++++ A C + ++ AL LL SFG PDVV+
Sbjct: 170 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVS 229
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
VL+ LC R E++EE M R C PN+ T+N LIS
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEE-------------------MVRMACPPNIVTFNTLIS 270
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C G+ + +V M G + + Y T+I G+C G ++ +IL M G
Sbjct: 271 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM--PSYGL 328
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
K + YN++L GL + +E E L +M +K P D + IL FC +G V+
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD-DVTFNILVDFFCQNGLVDRVI 387
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+QM+E G +P+V+ Y +I+ +C+E + EA L+K MT G P ++ VL GL
Sbjct: 388 ELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C A L+ + I +G ++ LI LC+KG + A LL QM+ G
Sbjct: 448 CSAERWVDAEDLMSQ---MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 504
Query: 482 PDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
PD +++++++ L + T L LLN MV+
Sbjct: 505 PDLISYSTVIDGLGKAGKTDEALELLNVMVN 535
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 18/268 (6%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN +++ YC G L+SA + + + N TY ++R LC+ GRI D L +L M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPP---NAYTYFPVVRALCARGRIADALAVLDEM- 148
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV-----DRSLKILGFCV 353
+ G Y+ +L R A+ L E L R + +L + C
Sbjct: 149 -PRRGCAPIPPMYHVILEAACRGGGFRSAVRVL---EDLHARGCALDVGNCNLVLNAICD 204
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G+V++A + G P+VV Y+ ++ C +R ELM+EM P T
Sbjct: 205 QGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVT 264
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
FNT++S LCR G + V E + + + G P Y+ +I +C++G + A +L
Sbjct: 265 FNTLISYLCRNG----LFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 320
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQTTW 500
+M G+ P+ + +N+LL L W
Sbjct: 321 NRMPSYGLKPNVVCYNTLLKGLCSAERW 348
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 212/436 (48%), Gaps = 32/436 (7%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M+ SG++ ++ ++ GLC V L+ + +G KP+ + YNTL++
Sbjct: 179 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 238
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ VG ++S ME+ N T+++LI Y + + A L ++ G PDV
Sbjct: 239 EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVY 298
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C + G +K EM + +PN TY LI
Sbjct: 299 IYTSIINWNC-------------------KFGNMKRAFVLFDEMTERRLVPNAYTYGALI 339
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G + +A + NDM+ G+ N V ++TL+ G C G ID+ L++ +M+ ++G
Sbjct: 340 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQ--QKG 397
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ N + G R N+++EA L ME+ + P V S+ I +C + N +A+
Sbjct: 398 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 457
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R F M ++G P+VV Y+ I YC++ ++ EA +L+ EM G +P T+ +++ G
Sbjct: 458 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 517
Query: 422 CRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
GNV AL+L E G+ R + Y+ +I L + G A L +M +GI
Sbjct: 518 RASGNVDRALELFNEMPQLGLNRNVVT----YTVIISGLSKDGRADEAFKLYDEMNKEGI 573
Query: 481 LPDYLTWNSLLICLSQ 496
+PD ++SL+ L +
Sbjct: 574 VPDDGIYSSLIASLHK 589
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 116/254 (45%), Gaps = 7/254 (2%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
++L Y + + DS+L+VF+ + G + + + L G ++ ++ L+ M D
Sbjct: 126 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 185
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
S G + R+ + +V+ GL ++ + A + ++ + P + + + G+ +V
Sbjct: 186 S--GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDV 243
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
M + NV Y LI Y + ++ EA +L EM G P + ++
Sbjct: 244 GGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI 303
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++ C+ GN+ A L +E R +P + Y LI C+ G ++A M++ M
Sbjct: 304 INWNCKFGNMKRAFVLFDEMTE---RRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQS 360
Query: 478 KGILPDYLTWNSLL 491
KG+ + + +N+L+
Sbjct: 361 KGVDVNRVIFNTLM 374
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 227/499 (45%), Gaps = 41/499 (8%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGD 80
G +D + + + N P + FN +L LV+ + D + YRK M GV
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK-MEFFGVSCS 138
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS--- 137
YT IL+ LC + VG GF +L + G KP+ + +NTLI+ LC G++ A
Sbjct: 139 VYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLD 198
Query: 138 -LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
+MS +P T ++++ CK A+V ++K P+VV+ + +++ LC
Sbjct: 199 YIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258
Query: 197 RVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
V +AV++ G G+ K KEM P+V T++
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFS 318
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
IL+ + C+ GV+ AL VF M + + VTY +LI G+C + +L M
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378
Query: 301 KEGSKGRISPYNSVLYGLY-----RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
I P + V + ++ ++ EA + M L P V + + G+C+
Sbjct: 379 ------NIRP-DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCL 431
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+++A++ FD M+ +G P+V+ Y+ LI YC+ ER+ EA +L EM+ G P + T
Sbjct: 432 HSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSIT 491
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T++SGLC+ G A +E + +G G P YS L+ C+ G A L
Sbjct: 492 HTTLISGLCQAGRPYAA----KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547
Query: 473 VQMVGKGILPDYLTWNSLL 491
+ + P+++ LL
Sbjct: 548 EALKKSQLKPNHVICKILL 566
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 200/431 (46%), Gaps = 27/431 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F T+I GL I + ++ D + P++ I++ L K A +
Sbjct: 172 PSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM+ + + +Y+I++ LC V + L + M+S G+ P V YN+LI+ +C
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCN 291
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G+ +A L +M E P+ VTFSIL+ A CKE ++ AL + K PD+VT
Sbjct: 292 SGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ +C + +ES L EM + P+V T++I +
Sbjct: 352 YSSLIHGVCKSS-------LWKESST------------LLNEMLSRNIRPDVVTFSIWVD 392
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ G++ A + N M G+ N VTY++L+ G C ++D+ K+ +M + +G
Sbjct: 393 VFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVN--KGC 450
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YN ++ G + + DEA + +M L P ++ + I G C G AK
Sbjct: 451 APDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE 510
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F +M G P+++ Y L+ +C+ + EA L + + P +L G+C
Sbjct: 511 LFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMC 570
Query: 423 RQGNVGTALKL 433
+ G + A +L
Sbjct: 571 KAGKLEDAKEL 581
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 8/303 (2%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G + +M P + +N L+++ DS + ++ M+ G+S +
Sbjct: 80 GSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSV 139
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
T LI LC + G +L + K G K I +N+++ GL E + EA+E L
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKI--FKLGFKPSIITFNTLINGLCIEGRIVEAMEQL 197
Query: 332 KQ-MEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
M + + P ++ + G C G A +M+E P VV Y +I + C+
Sbjct: 198 DYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKN 257
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
V EA +L M G P T+N+++ G+C G A L +E + + P
Sbjct: 258 RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK---PDV 314
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNE 508
+S L+ ALC++G A + +M+ + PD +T++SL+ + + + W LLNE
Sbjct: 315 VTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNE 374
Query: 509 MVS 511
M+S
Sbjct: 375 MLS 377
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I+G ++ I++ + D +S +TP+ +++ L + A
Sbjct: 452 PDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKEL 511
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM + G D TY+ L+ G C + + L +K +KPN VI L+ +CK
Sbjct: 512 FKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCK 571
Query: 129 NGKVGRARSLMSDM 142
GK+ A+ L S +
Sbjct: 572 AGKLEDAKELFSSL 585
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 199/402 (49%), Gaps = 31/402 (7%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVL 169
P + +N ++ SL K + A SL ME N VT +ILI +C + + +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------R 213
L K G+ PD +T+ +++ LC G V ++ ++ QG +
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
+G+ + + L+ +E + PNV YN +I C+ +++ A D++++M GI + +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 274 YDTLIRGLCSGGRIDDGLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
Y TLI G C G++ +L ++++ G + YN ++ L +E EA L
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPG----VYIYNILINALCKEGNVKEAKNLL 243
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
M K + P V S + G+C+ G V++AK+ F M++ G PNV Y+ +I+ C+
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 303
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV EA L++EM +P T+N+++ GLC+ G + +AL L+ E RG
Sbjct: 304 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH---RGQPADV 360
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ L+ ALC+ A+ L ++M +GI P T+ +L+
Sbjct: 361 VTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 402
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 199/420 (47%), Gaps = 30/420 (7%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G Q D +Y L+ GLC KLL +++ R +PN V+YNT+I LC
Sbjct: 102 FHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLC 161
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A L S+M+ P+ +T++ LI +C L+ A LL++ P V
Sbjct: 162 KDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVY 221
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ LC G V +A +L M ++G P V TY+ L+
Sbjct: 222 IYNILINALCKEGNVKEAKNLLA-------------------VMTKEGIKPGVVTYSTLM 262
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G + +A +F+ M G++ N +Y+ +I GLC R+D+ + +L+ E +
Sbjct: 263 DGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLR--EMLHKN 320
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GFCVDGNVEDAK 361
YNS++ GL + + AL + +M + P V +L C + N++ A
Sbjct: 321 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M E G P + Y LI C+ R++ A EL + + G T+ ++SGL
Sbjct: 381 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 440
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++G AL ++ M G +P + + +I++L EK A LL +M+ KG+L
Sbjct: 441 CKEGMFDEALA-IKSKME--DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 212/467 (45%), Gaps = 27/467 (5%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
TP + FN IL L K L K+M G++ + T IL+ C ++ F
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYC 158
+L + G +P+++ NTL+ LC G+V ++ +++ + + V++ L+ C
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K A+ LL P+VV +++ LC V +A ++ E +G
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
LG++ G L EM K P V YNILI++ C+ G + A ++ M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+GI VTY TL+ G C G + + +I M + G + YN ++ GL +
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM--VQMGVNPNVYSYNIMINGLCKCK 304
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DEA+ L++M + + P V + I G C G + A ++M G +VV Y
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ A C+ + + +A+ L +M G P T+ ++ GLC+ G + A +L + +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV- 423
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+G Y+ +I LC++G F A + +M G +P+ +T+
Sbjct: 424 --KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 169/373 (45%), Gaps = 39/373 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G + D + N+ P + I+N +++ L KE ++ A+
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G++ TY+ LM G CL V + ++ H M GV PN YN +I+ LC
Sbjct: 243 L-AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC 301
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +V A +L+ +M P+ VT++ LI CK + +AL L+ + G DVV
Sbjct: 302 KCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVV 361
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +L+ LC + A + F+K M+ +G P + TY LI
Sbjct: 362 TYTSLLDALCKNQNLDKATAL------------------FMK-MKERGIQPTMYTYTALI 402
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G L +A ++F + + G + TY +I GLC G D+ L I MED+ G
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN--G 460
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGF-----CVDGNVE 358
+ ++ L+ +++ D+A EKL + + L +L F V +
Sbjct: 461 CIPNAVTFEIIIRSLFEKDENDKA-------EKLLHEMIAKGLLVLDFKVADVFVQNEND 513
Query: 359 DAKRCFDQMIEEG 371
A++ +MI +G
Sbjct: 514 KAEKLLHEMIAKG 526
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 139/547 (25%), Positives = 255/547 (46%), Gaps = 60/547 (10%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DID 62
+++ P+ + T++ GL +A + + + + N +P +N+++D L K + D
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+A + K+M G+ + TY I++ L R + ++L H +K +G P+ YNTL
Sbjct: 410 MACGLF-KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTL 468
Query: 123 IHSLCKNGKVGRARSLMSDM----------------------------EEPN-------D 147
I L K G++ + +++ +M E P+ +
Sbjct: 469 IDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGE 528
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+T++ L+ A+ ++ A+ LLE +P VVT T +++ L GR+ +AV +L E
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLRE 588
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+QG + + + EM RKGC+ +V TY+++I+ C++
Sbjct: 589 MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+D ALDVF MK +G+ Y TL+ L +ID L+I +++S + Y
Sbjct: 649 VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFV--Y 706
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ GL + N+ DEA + + M + + P + + G G +E+A F +M E
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
EG P+VV Y L+ + ++ A + + M +P T+++++ L ++G V
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEE 826
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A E I +G P G YS LI + +KG A L +M + P+ +T+N+
Sbjct: 827 AYYFFE---NSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNN 883
Query: 490 LLICLSQ 496
LL L++
Sbjct: 884 LLSGLAK 890
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 208/438 (47%), Gaps = 27/438 (6%)
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ TY LM V + KLL VMK P V Y TL+ L K G++ A SL+
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587
Query: 141 DME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS-- 194
+ME EP+ VT+S L+ ++ K + +L L ++ G V DV T + V+ LC
Sbjct: 588 EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD 647
Query: 195 -VGRVMDAVEILEESGEQGRLG-------------KVKGGCRFLKEMERKGCLPNVDTYN 240
V + +D ++E G + LG K+ + E++ +P+ YN
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
I+++ ++ +D A + + MK I + TY +L+ GL GR+++ + M +
Sbjct: 708 IMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM--T 765
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
+EG + + Y S++ L + + AL + M K P V S I +G VE
Sbjct: 766 EEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVE 825
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A F+ I +G PNV +Y LI ++ ++ V A EL +EM P T+N +L
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLL 885
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
SGL + G + A KL+EE M + G +P Y+ LI + + G A +M K
Sbjct: 886 SGLAKAGRLNVAEKLLEE-MEKV--GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942
Query: 479 GILPDYLTWNSLLICLSQ 496
GI+PD +T+ SL+ L +
Sbjct: 943 GIVPDVITFTSLIESLGK 960
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 203/410 (49%), Gaps = 35/410 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVK-EDIDLAR 65
D S + VI L ++ +DV +A D+ R M P L + ++L LVK E ID A
Sbjct: 632 DVSTYSLVINCLCKS---DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFAL 688
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ ++ S + D + Y I++ GL +NRV + KL+ MK++ + P+ Y +L+
Sbjct: 689 QIF-NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDG 747
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L K+G++ A ++ + M EP+ V ++ L+ K L +AL++ VPD
Sbjct: 748 LGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPD 807
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VVT + +++ L GRV +A E S KGC PNV Y+
Sbjct: 808 VVTYSSLIDSLGKEGRVEEAYYFFENS-------------------ISKGCTPNVGVYSS 848
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI S+ + G++D AL++F +M+ N VTY+ L+ GL GR++ K+L+ ME K
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEME--K 906
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G + YN ++ G+ + DEA Y K+M++ + P + + I + +
Sbjct: 907 VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
A FD M EEG P+VV Y+ LI + +V EA+ + EM G +P
Sbjct: 967 ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 215/450 (47%), Gaps = 24/450 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + T++ GLG+A +++ V + + PS+ ++S++ K D +
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSL 620
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G D TY++++ LC ++ V + MK G++P Y TL+ SL K
Sbjct: 621 FDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK 680
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ A + ++++E P+ ++I++ K + A L++ + +PD+ T
Sbjct: 681 DEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFT 740
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEME 228
T +L+ L GR+ +A + + E+ G+ GK+ + M
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+K C+P+V TY+ LI S + G ++ A F + G + N Y +LI G +D
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSL 346
L++ + M+ + I YN++L GL + + + A + L++MEK+ P V ++
Sbjct: 861 RALELFEEMQ--RRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNI 918
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G G V++A+ F +M E+G VP+V+ + LI + + +++ EA EL M G
Sbjct: 919 LIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEG 978
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y P T+N ++ L R G V A + E
Sbjct: 979 YNPSVVTYNVLIDILGRAGKVHEAAMIFHE 1008
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/572 (23%), Positives = 247/572 (43%), Gaps = 93/572 (16%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-------------- 58
+ +++R G ++ ++ + + F PS ++N +L++LVK
Sbjct: 219 LLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL 278
Query: 59 ------EDIDLARAFYR---------------KKMMASGVQGDDYTYAILMKGLCLTNRV 97
D R F ++M+ SG+ +T+ +L+ L + +
Sbjct: 279 GQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNI 338
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
+ K + MK+ PN V Y TL++ L K G++ A + +M+E P+ + ++ L
Sbjct: 339 DEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTL 398
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
I K A L ++ G VP++ T ++ +L GR +A ++ + EQG
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458
Query: 214 LGKV-----------KGG-----CRFLKEMERKG--CLPNVD------------------ 237
+ V KGG +KEM KG C+ + D
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY 518
Query: 238 -----------TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
TYN L+S++ G +D A+ + MK VTY TL+ GL GR
Sbjct: 519 PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+D+ + +L+ ME K+G + + Y+S++ Y+ +Q++E+L +M +
Sbjct: 579 LDEAVSLLREME--KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTY 636
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL I C +V+ A F +M EEG P + Y L+ + ++E++ A ++ E+
Sbjct: 637 SLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQE 696
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+P +N +++GL + V A KLV + M+ + LP Y+ L+ L + G
Sbjct: 697 SSLVPDTFVYNIMVNGLVKSNRVDEACKLV-DSMK--NQNILPDLFTYTSLLDGLGKSGR 753
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ A + +M +G PD + + SL+ L +
Sbjct: 754 LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 30/296 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDL 63
PD + +++ GLG++ + + ++ P + + S++DVL K + +
Sbjct: 736 PDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALII 795
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
RA +K+ + D TY+ L+ L RV + + S+G PN +Y++LI
Sbjct: 796 FRAMAKKRCVP-----DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLI 850
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
S K G V RA L +M+ PN VT++ L+ K L A LLE+ G V
Sbjct: 851 DSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCV 910
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------------RLGKVKG---GCRF 223
PD+VT +++ + +G V +A + E+G LGKV C
Sbjct: 911 PDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACEL 970
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
ME +G P+V TYN+LI G + A +F++MK+ G + +T + R
Sbjct: 971 FDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 39/300 (13%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G V G +M+ GC P+ + YN ++ + G SA+ VF + I +
Sbjct: 228 GSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDA 287
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
T+ + GR+D + +Q M K G + + ++ L + DEA ++
Sbjct: 288 QTFRIFVHSFNRSGRLDPAAEPIQEM--IKSGIDPGVHTFTVLIDALVKSGNIDEACKFF 345
Query: 332 KQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M+ L RC PNVV Y L++ + R
Sbjct: 346 NGMKNL------------------------RC---------SPNVVTYTTLVNGLAKAGR 372
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ EA E+ EM + P A +NT++ GL + G A L +E M+ RG +P
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKE-MKD--RGLVPNLRT 429
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-LLLLLLNEMV 510
Y+ +I L + G A L + +G +PD T+N+L+ L + +L ++ EMV
Sbjct: 430 YNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMV 489
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
Q PP+ + ++ GL +A +N K + + + P L +N ++D + K +D A
Sbjct: 873 QCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEA 932
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+++ K+M G+ D T+ L++ L +++ + +L M+ G P+ V YN LI
Sbjct: 933 ESYF-KRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSIL 153
L + GKV A + +M+ P+ +T I+
Sbjct: 992 ILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 221/459 (48%), Gaps = 28/459 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D TY I++ G C + + KLL M +RG++ N V Y ++I LC G+V A ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 140 SDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
DM + F+ ++ +C++ +L A ++ G D VT T ++ LC
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 196 GRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTY 239
G + +A +L+E ++G ++GK+ +M +K PNV TY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L C+ G + +A ++ ++M G+ N TY++LI GLC G ++ ++ + M++
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ G K + Y +++ L + + D A L++M + + P V ++ + GFC+ G V
Sbjct: 524 A--GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E KR + M+E+ PN Y+ L+ YC E+ ++ +E+ K M +P +T+N +
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G C+ N+ AL E I +G + Y+ LI+ L +K F A L +M
Sbjct: 642 IKGHCKARNMKEALYFHSE---MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 478 KGILPDYLTWNSLL-ICLSQQTTWLLLLLLNEMVSFVMV 515
+ + + +N + + ++ L L +E+V +V
Sbjct: 699 ERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 184/385 (47%), Gaps = 62/385 (16%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV-TFSILICAYCKEENLVNALVLLEKS 173
N+ YN L+ +LC G++ A L +M P DV T+ I++ YC L A+ LL +
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ G + V T V+ LLC G+V DAV ++E +M G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVE-------------------DMVMHGVV 352
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
+ + ++S +C G L +A + F++M+ G++ + VTY LI GLC G + + ++
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV 353
LQ MED KG L AV ++ I G+C
Sbjct: 413 LQEMED-----KG------------------------------LDVDAVTYTVLIDGYCK 437
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A ++M+++ PNVV Y L C++ V A+EL+ EM G T
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497
Query: 414 FNTVLSGLCRQGNVGTALK-LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+N++++GLC+ GN+ A++ +++ D G+ P Y+ +I ALC+ A LL
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK----PDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 473 VQMVGKGILPDYLTWNSLL--ICLS 495
+M+ KGI P +T+N L+ C+S
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMS 578
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 60/428 (14%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ +VI L ++D V+ + + + +F +++ ++ D+ AR ++ +M
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF-DEM 381
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D TY L+ GLC + + ++L M+ +G+ ++V Y LI CK GK+
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + + M + PN VT++ L CK+ ++ A LL + S G ++ T +
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC G + A+ R + +M+ G P+V TY +I + C+
Sbjct: 502 INGLCKAGNLEQAM-------------------RTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ LD A + +M GI VTY+ L+ G C GR++ G ++L+ M + +
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE--KNIHPNT 600
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ YNS+ +KQ +C++ N++ + M+
Sbjct: 601 TTYNSL----------------MKQ-----------------YCIEKNMKSTTEIYKGML 627
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ VPN Y+ LI +C+ ++EA EM G+ AS++N ++ L ++
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687
Query: 429 TALKLVEE 436
A +L E+
Sbjct: 688 EARRLFEK 695
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 52/327 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I G + + + + + + +TP++ + ++ D L K+ A
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M + G++ + +TY L+ GLC + + + M G+KP+ Y T+I +LC++
Sbjct: 484 HEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS 543
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
++ RA SL+ +M L+K G P +VT ++
Sbjct: 544 KELDRAHSLLQEM---------------------------LDK----GIKPTIVTYNVLM 572
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
C GRV +GG R L+ M K PN TYN L+ YC
Sbjct: 573 NGFCMSGRV-------------------EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ S +++ M + N TY+ LI+G C + + L M ++G + S
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM--IEKGFRLTAS 671
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK 336
YN+++ L ++ + EA ++M K
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+ +F ++ N +Y+ L++ LC+ GRI D ++ M SP
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM----------ASPP 283
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ V YG+ + G+C +E A + +M G
Sbjct: 284 DVVTYGIM----------------------------VHGYCTLSELETAIKLLSEMAARG 315
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
N V Y +I C E +V +A ++++M HG + A+ F TV+SG CR+G++ A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+E + RG Y+ LI LC G + A +L +M KG+ D +T+ L+
Sbjct: 376 NWFDEMQK---RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 222/493 (45%), Gaps = 30/493 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+ S+F +IR R M+ D ++ L+ PS+ N +L LVKE A +
Sbjct: 97 NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M+A V D T+ IL+ LC+ ++ LL M+ G P+ V YNT+++ CK
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A L+ M E + T+++L+ CK +LL+K P+ +T
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ G V + GK+ R +EM LPN TYN LI
Sbjct: 277 NSIIN-----GFVKE--------------GKIGAATRIFQEMSMLNLLPNCVTYNALIDG 317
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C G + AL + M+ G N V+Y L+ GLC + + IL+ M G
Sbjct: 318 HCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMR--MNGMI 375
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
Y +++ GL R +E+++ L +M K + P V S+ I GFC G +++ K
Sbjct: 376 VGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEI 435
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+M + G PN +IY LI+ YC+ V EA ++ M+ GY N ++S LC+
Sbjct: 436 ICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCK 495
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G VG A + M I G++P S + +I G A + +M+ G P
Sbjct: 496 DGKVGVA-EYFFHHMSKI--GNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPS 552
Query: 484 YLTWNSLLICLSQ 496
+ T+ LL L +
Sbjct: 553 HFTYGGLLKALCR 565
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 224/474 (47%), Gaps = 34/474 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ +N++L+ K+ A +M + G++ D TY +L+ LC NR G+ L
Sbjct: 201 PSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLL 260
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L M+ R + PN + YN++I+ K GK+G A + +M PN VT++ LI +C
Sbjct: 261 LKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCH 320
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----- 214
+ N AL +LE + G P+ V+ + +L LC + + ILE G +
Sbjct: 321 DGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIA 380
Query: 215 --GKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G CR L +M + G +P+V T+++LI+ +C G + + ++ M
Sbjct: 381 YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMY 440
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G++ N + Y TLI C G + + K+ M S+ G N ++ L ++ +
Sbjct: 441 KAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAM--SRIGYDANCFICNVLVSSLCKDGK 498
Query: 324 QDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
A + M K+ P ++ I G+ GN A FD+MI+ G P+ Y
Sbjct: 499 VGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGG 558
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIA---STFNTVLSGLCRQGNVGTALKLVEEDM 438
L+ A C+ + +EA L+ ++ Y+P A T+NT+L + G + A+ L +E +
Sbjct: 559 LLKALCRAGKFKEAKRLLDKLH---YIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMV 615
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG-ILPDYLTWNSLL 491
+ R LP S Y+ + L +G +A ++GKG + P+ + + + +
Sbjct: 616 Q---RNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFV 666
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 220/517 (42%), Gaps = 55/517 (10%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL--------VKEDIDLAR 65
+ +I GL R ++N+ VK D + + + P + F+ +++ VKE I
Sbjct: 381 YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEII---- 436
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
KM +G+ + Y L+ C T V + FK+ M G N I N L+ S
Sbjct: 437 ----CKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSS 492
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+GKVG A M + PN +TF +I Y N + A + ++ G P
Sbjct: 493 LCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPS 552
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T +L+ LC R GK K R L ++ + TYN
Sbjct: 553 HFTYGGLLKALC-------------------RAGKFKEAKRLLDKLHYIPSAVDTVTYNT 593
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++ ++G+L A+ +F++M + + TY + GL G++ L +
Sbjct: 594 ILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLL--- 650
Query: 302 EGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
KG +SP Y + + GL+R Q AL + + MEK L + ++ + G+ G
Sbjct: 651 --GKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMG 708
Query: 356 NVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ A F M + P++ Y+ L+H Y +++ + + S L M G P T
Sbjct: 709 KMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTC 768
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
++++ G C+ + LKL+++ + G ++ LI CE A L+
Sbjct: 769 HSLILGFCKSAMLDVGLKLLKKMLLD---GVAVDQCTFNMLIMKYCETDEVGKAFDLVNI 825
Query: 475 MVGKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEMV 510
M I PD T +S++ LS+ T LLL+EM+
Sbjct: 826 MNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEML 862
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 31/407 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P++ ++ T + GL RA + + + + + L N IL+ + +A+A
Sbjct: 657 PEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMG-KMAKAGD 715
Query: 69 RKKMMASGVQGDD--YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
MM SG+ TY IL+ G + L ++M G+ P+ + ++LI
Sbjct: 716 IFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGF 775
Query: 127 CKNG--KVGRARSLMS--DMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ VG D + TF++LI YC+ + + A L+ F PD+
Sbjct: 776 CKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDM 835
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T ++ +L V V ++ +L E M +GC+P+ Y L
Sbjct: 836 TTHDSIISVLSRVSTVQESHLLLHE-------------------MLERGCIPDRRQYIAL 876
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
++ C G + A + ++M+ GIS V L+RGL G++++ +L M ++
Sbjct: 877 VNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFM--LRK 934
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDA 360
I+ + ++++ R EAL+ M+ + + ++ I G C DG+V A
Sbjct: 935 SLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASA 994
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHA-YCQEERVREASELMKEMTGHG 406
+ + ++ + G PN+ Y LI A + + + + L+K++ G
Sbjct: 995 LKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEVLLKDLQERG 1041
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 189/477 (39%), Gaps = 66/477 (13%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ +G +TY L+K LC + + +LL + ++V YNT++ K+G
Sbjct: 543 EMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSG 602
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTI 185
+ A +L +M + P+ T++I+ + +V AL G V P+ V
Sbjct: 603 MLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMY 662
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV-KGGCRFLKEME 228
T ++ L G+ A+ E+ + G R+GK+ K G F
Sbjct: 663 TTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWS 722
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
P++ TYNIL+ Y + L +++N M GI + +T +LI G C +D
Sbjct: 723 GITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLD 782
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
GLK L + +G +N ++ ++ +A + + M +FP
Sbjct: 783 VGLK--LLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDS 840
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I V+++ +M+E G +P+ Y L++ C+ + A +L EM G
Sbjct: 841 IISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALG 900
Query: 407 -----------------------------------YLPIASTFNTVLSGLCRQGNVGTAL 431
+P +TF T++ CR ++ AL
Sbjct: 901 ISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEAL 960
Query: 432 KLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
KL + D + + Y+ LI LC G SA L ++ +G+ P+ T+
Sbjct: 961 KLKDTMDFCDVKLDVIA----YNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTY 1013
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 212/436 (48%), Gaps = 32/436 (7%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M+ SG++ ++ ++ GLC V L+ + +G KP+ + YNTL++
Sbjct: 175 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 234
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ VG ++S ME+ N T+++LI Y + + A L ++ G PDV
Sbjct: 235 EIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVY 294
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C + G +K EM + +PN TY LI
Sbjct: 295 IYTSIINWNC-------------------KFGNMKRAFVLFDEMTERRLVPNAYTYGALI 335
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G + +A + NDM+ G+ N V ++TL+ G C G ID+ L++ +M+ ++G
Sbjct: 336 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQ--QKG 393
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ N + G R N+++EA L ME+ + P V S+ I +C + N +A+
Sbjct: 394 FEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEAR 453
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R F M ++G P+VV Y+ I YC++ ++ EA +L+ EM G +P T+ +++ G
Sbjct: 454 RLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGE 513
Query: 422 CRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
GNV AL+L E G+ R + Y+ +I L + G A L +M +GI
Sbjct: 514 RASGNVDRALELFNEMPQLGLNRNVVT----YTVIISGLSKDGRADEAFKLYDEMNKEGI 569
Query: 481 LPDYLTWNSLLICLSQ 496
+PD ++SL+ L +
Sbjct: 570 VPDDGIYSSLIASLHK 585
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 116/254 (45%), Gaps = 7/254 (2%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
++L Y + + DS+L+VF+ + G + + + L G ++ ++ L+ M D
Sbjct: 122 DMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVD 181
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
S G + R+ + +V+ GL ++ + A + ++ + P + + + G+ +V
Sbjct: 182 S--GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDV 239
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
M + NV Y LI Y + ++ EA +L EM G P + ++
Sbjct: 240 GGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSI 299
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++ C+ GN+ A L +E R +P + Y LI C+ G ++A M++ M
Sbjct: 300 INWNCKFGNMKRAFVLFDEMTE---RRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQS 356
Query: 478 KGILPDYLTWNSLL 491
KG+ + + +N+L+
Sbjct: 357 KGVDVNRVIFNTLM 370
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 212/461 (45%), Gaps = 69/461 (14%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L+ LC + R + +LH + G + N L+ +L + + R +L+++M+E
Sbjct: 276 LISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMD 335
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEK-----SFSFGFVPDVVTITKVLELLCSVGR 197
PN VTF ILI CK + AL + EK S F PDV+T +++ LC VGR
Sbjct: 336 IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGR 395
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ + ++E Q R C+PN TYN LI YC+ ++++A +
Sbjct: 396 QEEGLGLVERMRSQPR------------------CMPNTVTYNCLIDGYCKASMIEAARE 437
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+F+ M DG+ N VT +TL+ G+C GRI+ ++ M+ +G KG Y +++
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQG--KGLKGNAVTYTALIRA 495
Query: 318 LYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
N ++A+E +M + P A+ I G G ++ A +M E G P+
Sbjct: 496 FCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPD 555
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS---------------- 419
+V ++ LI+ +C++ ++ EA E++KEM G P T+NT++S
Sbjct: 556 IVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 420 -------------------GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
C GN+ A+K+ DM + P + Y+ LI +LC
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIF-RDMSSTSKVP-PNTVIYNILINSLC 673
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
K A L+ M KG+ P+ T+N++ L Q+ WL
Sbjct: 674 RKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGL-QEKNWL 713
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 36/406 (8%)
Query: 64 ARAFYR-----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM---KSRG--VK 113
AR F R +M +Q + T+ IL+ LC RV + ++ M +S G V+
Sbjct: 318 AREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVE 377
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALV 168
P+ + YNTLI LCK G+ L+ M PN VT++ LI YCK + A
Sbjct: 378 PDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARE 437
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK------------ 216
L ++ G P+VVT+ +++ +C GR+ AVE E +G G
Sbjct: 438 LFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFC 497
Query: 217 ----VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
++ EM GC P+ Y LIS + G LD A V + MK G S + V
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+++ LI G C ++D+ ++L+ ME++ G K YN+++ + A +K
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENA--GIKPDGVTYNTLISHFSKTGDFSTAHRLMK 615
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP-NVVIYDCLIHAYCQE 389
+M E L P V I +C++GN+++A + F M VP N VIY+ LI++ C++
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRK 675
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+V A LM +M G P +TFN + GL + + A +L++
Sbjct: 676 NQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMD 721
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 164/333 (49%), Gaps = 30/333 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + +I G +A MI + D +++ + P++ N+++D + K I+ A F
Sbjct: 414 PNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEF 473
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G++G+ TY L++ C N + +L M G P++++Y TLI L
Sbjct: 474 F-NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLS 532
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ RA ++S M+E P+ V+F++LI +C++ L A +L++ + G PD V
Sbjct: 533 QAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGV 592
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ + G R +K+M ++G +P V TY LI
Sbjct: 593 TYNTLISHF-------------------SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633
Query: 244 SSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK- 301
+YC G LD A+ +F DM + N V Y+ LI LC ++D L LM+D K
Sbjct: 634 HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA---LSLMDDMKV 690
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+G K + +N++ GL +N +A E + +M
Sbjct: 691 KGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 176/394 (44%), Gaps = 44/394 (11%)
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEEP------NDVTFSILICAYCKEENLVNALV--- 168
I N LI L + G+V A L+ +M +P N T I+ A K + + A+
Sbjct: 194 IRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEE 253
Query: 169 ---LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-GGCRFL 224
L+ K P+ + +T+++ LC GR A ++L G +K GG
Sbjct: 254 IVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLH--------GLMKLGGV--- 302
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
ME C N L+++ + +MK I N VT+ LI LC
Sbjct: 303 --MEAASC-------NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKF 353
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEAL---EYLKQMEKL 337
R+D+ L++ + M + E + + P YN+++ GL + +Q+E L E ++ +
Sbjct: 354 RRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRC 412
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V + I G+C +E A+ FDQM ++G PNVV + L+ C+ R+ A E
Sbjct: 413 MPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVE 472
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
EM G G A T+ ++ C N+ A++L +E + G P + Y LI
Sbjct: 473 FFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEA---GCSPDAIVYYTLIS 529
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L + G AS +L +M G PD +++N L+
Sbjct: 530 GLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLI 563
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE----------------- 59
+++ + A + D V L+S F+ T + ++ +VKE
Sbjct: 578 MLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYC 637
Query: 60 ---DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
++D A +R S V + Y IL+ LC N+V L+ MK +GVKPN+
Sbjct: 638 LNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNT 697
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSIL 153
+N + L + + +A LM M E P+ +T IL
Sbjct: 698 NTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738
>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
Length = 466
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 206/427 (48%), Gaps = 39/427 (9%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V D YTY ++KGLC+ + + +L+ M PN V + T I S C+NG + RA
Sbjct: 3 VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L+ M P+ V +S LI + ++ ++ AL LL P+ V L+ L
Sbjct: 63 QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLC---KPNTVCYNAALKGL 119
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C R E+ GE + EM RKGC PN T+++LISS C+ ++
Sbjct: 120 CIAER-------WEDIGE------------LMAEMVRKGCSPNEATFSMLISSLCQNNLV 160
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
DSA++V M+ G + V Y+ +I L GR+DD L++L M K + G +N
Sbjct: 161 DSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV-CKPDALG----FN 215
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEE 370
+VL G R + +A E + QM + ++ + IL C +G V A + F+QM
Sbjct: 216 AVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRY 275
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
P++V Y L++ + ++ V A +L + M P ++N VL GLCR A
Sbjct: 276 RCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDA 332
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+ E +G+ P ++ LI +LC+KG A +L QM G PD T+N+L
Sbjct: 333 GELIAE---MVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNAL 389
Query: 491 LICLSQQ 497
+ S+Q
Sbjct: 390 INGFSEQ 396
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 210/447 (46%), Gaps = 51/447 (11%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKED 60
+ PP+E F T IR + +++ V+ D + R+ TP + I++++++ V +
Sbjct: 37 RCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQA 96
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+DL K + Y +KGLC+ R D +L+ M +G PN ++
Sbjct: 97 LDLLNTMLCKP--------NTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFS 148
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI SLC+N V A ++ ME EP+ V ++I+I + + + +AL LL S
Sbjct: 149 MLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLN---SM 205
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
PD + VL+ C R DA E+ + +M R C P +
Sbjct: 206 VCKPDALGFNAVLKGFCRAERWHDASEL-------------------IAQMFRDDC-PLI 245
Query: 237 D-TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ T+NILI C+ G+++ A VF M + + VTY +L+ G G ++ +++ +
Sbjct: 246 EMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFR 305
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
M K I YN+VL GL R + ++A E + +M + P V ++ I C
Sbjct: 306 SMP-----CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQ 360
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G V+ A +QM G P++ Y+ LI+ + ++ R+ +A +L+ M+ P A +
Sbjct: 361 KGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAIS 417
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRG 440
+N+ L GLCR A +LV E +R
Sbjct: 418 YNSTLKGLCRAERWQDAEELVAEMLRN 444
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+E F +I L + +++ ++ + + + TP + +N++++ E L A
Sbjct: 345 PPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF-SEQGRLDDAL 403
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K + + D +Y +KGLC R D +L+ M PN V + H L
Sbjct: 404 --KLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLM 461
Query: 128 KN 129
N
Sbjct: 462 PN 463
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 221/474 (46%), Gaps = 35/474 (7%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+ IL LVK LAR + KM+ SGV D+Y Y ++ C + + L+ M+
Sbjct: 167 SQILFSLVKIRQFALARDLF-DKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRME 225
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
S GVK ++V YN L++ LCKN +V A + + M ++VT+ L+ +C+ E L
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV------- 217
AL + GFVP + +++ L V +A + + G+ G + V
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345
Query: 218 ---------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
R KEM +G PN TY ILI + C+ G+++ AL +F+ M+ GI
Sbjct: 346 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 405
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
Y++LI G C G +D +L M KEG + Y+ ++ GL R A+
Sbjct: 406 VTVYPYNSLINGYCKQGSLDRARGLLSGM--VKEGLTPTAASYSPLIAGLCRNGDLSSAM 463
Query: 329 EYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E ++M + + + L GFC D +++A R FD+MI+ +PN V ++ +I Y
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---EEDMRGIGR 443
C +R+A +L +M G P T+ +++SGLC V A + V E +
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
SL + L+ L +G F L +M +G+ D +++ ++ +Q
Sbjct: 584 FSL------TALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/536 (25%), Positives = 232/536 (43%), Gaps = 57/536 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE + T++ G R + ++ T + R PS + ++D L K+++ + AF
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL-VEEAFSL 325
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+ G+ + + Y L+ LC R D +L M RG++PN V Y LIH+LCK
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385
Query: 129 NGKVGRARSLMSDMEEPN-DVT---FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M + VT ++ LI YCK+ +L A LL G P +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+ ++ LC G + A+E+ E E+G + K+ R +M
Sbjct: 446 YSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+PN T+N++I YC G + A +++ M G+ + TY +LI GLC +
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ + +E+S ++LYGL+RE + E +M + S I
Sbjct: 566 KANEFVADLENSYAVLNN--FSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTI 623
Query: 349 LGFCVDGNVEDAKRC--FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ + + K C F +M E+G P+ + Y C+I A +EE + +A +M G
Sbjct: 624 IVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDG 683
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG-------------------------- 440
Y P T +++ LC+ G +G+A L +E + G
Sbjct: 684 YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK 743
Query: 441 -----IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G L ++ LIK LC+ G Q A L+ ++ G PD +++++++
Sbjct: 744 DLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTII 799
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 130/543 (23%), Positives = 229/543 (42%), Gaps = 96/543 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E + +I L + MI D + D + + ++ +NS+++ K+ +D AR
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+ G+ +Y+ L+ GLC + +L M RG+ N+ + LI+ C
Sbjct: 431 L-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFC 489
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ K+ A L M + PN+VTF+++I YC N+ A L ++ G PD
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESG----------------EQGRLGK-------- 216
T ++ LC V A E LE S +GR +
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEM 609
Query: 217 -VKG-----------------------GCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
V+G C +EM+ +G P+ Y +I + + +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
AL+ ++ M IDG S N VT+ LI LC G + +L+ KE G + P N
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSA----ELL--CKEMLAGNVLP-N 722
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
Y + L+Y F +G++E AK M++ G
Sbjct: 723 KFTYNCF--------LDY--------------------FATEGDMEKAKDLHSAMLQ-GH 753
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+ ++V ++ LI C+ +++EA +LM+++T G+ P +++T++ LC+ G++ A +
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFE 813
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
L E + +G P Y+ I+ G A + M+ G+ P++ T+ +LL
Sbjct: 814 LWNEMLY---KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870
Query: 493 CLS 495
+S
Sbjct: 871 GIS 873
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 221/459 (48%), Gaps = 28/459 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D TY I++ G C + + KLL M +RG++ N V Y ++I LC G+V A ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 140 SDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
DM + F+ ++ +C++ +L A ++ G D VT T ++ LC
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 196 GRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTY 239
G + +A +L+E ++G ++GK+ +M +K PNV TY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L C+ G + +A ++ ++M G+ N TY++LI GLC G ++ ++ + M++
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ G K + Y +++ L + + D A L++M + + P V ++ + GFC+ G V
Sbjct: 524 A--GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E KR + M+E+ PN Y+ L+ YC E+ ++ +E+ K M +P +T+N +
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G C+ N+ AL E I +G + Y+ LI+ L +K F A L +M
Sbjct: 642 IKGHCKARNMKEALYFHSE---MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 478 KGILPDYLTWNSLL-ICLSQQTTWLLLLLLNEMVSFVMV 515
+ + + +N + + ++ L L +E+V +V
Sbjct: 699 ERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 184/385 (47%), Gaps = 62/385 (16%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV-TFSILICAYCKEENLVNALVLLEKS 173
N+ YN L+ +LC G++ A L +M P DV T+ I++ YC L A+ LL +
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ G + V T V+ LLC G+V DAV ++E +M G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVE-------------------DMVMHGVV 352
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
+ + ++S +C G L +A + F++M+ G++ + VTY LI GLC G + + ++
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV 353
LQ MED KG L AV ++ I G+C
Sbjct: 413 LQEMED-----KG------------------------------LDVDAVTYTVLIDGYCK 437
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A ++M+++ PNVV Y L C++ V A+EL+ EM G T
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497
Query: 414 FNTVLSGLCRQGNVGTALK-LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+N++++GLC+ GN+ A++ +++ D G+ P Y+ +I ALC+ A LL
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK----PDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 473 VQMVGKGILPDYLTWNSLL--ICLS 495
+M+ KGI P +T+N L+ C+S
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMS 578
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 60/428 (14%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ +VI L ++D V+ + + + +F +++ ++ D+ AR ++ +M
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF-DEM 381
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D TY L+ GLC + + ++L M+ +G+ ++V Y LI CK GK+
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + + M + PN VT++ L CK+ ++ A LL + S G ++ T +
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC G + A+ R + +M+ G P+V TY +I + C+
Sbjct: 502 INGLCKAGNLEQAM-------------------RTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ LD A + +M GI VTY+ L+ G C GR++ G ++L+ M + +
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE--KNIHPNT 600
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ YNS+ +KQ +C++ N++ + M+
Sbjct: 601 TTYNSL----------------MKQ-----------------YCIEKNMKSTTEIYKGML 627
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ VPN Y+ LI +C+ ++EA EM G+ AS++N ++ L ++
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687
Query: 429 TALKLVEE 436
A +L E+
Sbjct: 688 EARRLFEK 695
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 52/327 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I G + + + + + + +TP++ + ++ D L K+ A
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M + G++ + +TY L+ GLC + + + M G+KP+ Y T+I +LC++
Sbjct: 484 HEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS 543
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
++ RA SL+ +M L+K G P +VT ++
Sbjct: 544 KELDRAHSLLQEM---------------------------LDK----GIKPTIVTYNVLM 572
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
C GRV +GG R L+ M K PN TYN L+ YC
Sbjct: 573 NGFCMSGRV-------------------EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ S +++ M + N TY+ LI+G C + + L M ++G + S
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM--IEKGFRLTAS 671
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK 336
YN+++ L ++ + EA ++M K
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+ +F ++ N +Y+ L++ LC+ GRI D ++ M SP
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM----------ASPP 283
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ V YG+ + G+C +E A + +M G
Sbjct: 284 DVVTYGIM----------------------------VHGYCTLSELETAIKLLSEMAARG 315
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
N V Y +I C E +V +A ++++M HG + A+ F TV+SG CR+G++ A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+E + RG Y+ LI LC G + A +L +M KG+ D +T+ L+
Sbjct: 376 NWFDEMQK---RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 196/431 (45%), Gaps = 32/431 (7%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDI 61
+QS P S+ F ++ + R V+ + + F ++ L F ++ + +
Sbjct: 57 VQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRL 116
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
LA + KMM G T+ L+ G CL NR+ D F L+ M G +PN V+YNT
Sbjct: 117 SLALSIL-GKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNT 175
Query: 122 LIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI LCKNG V A L+++ME+ + VT++ L+ C A +L
Sbjct: 176 LIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKR 235
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
PDV T T +++ G + +A E+ K+M + PN
Sbjct: 236 RINPDVFTFTALIDAFVKQGNLDEAQEL-------------------YKQMLQSSIGPNT 276
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN LI+ C G L A F+ M G N VTY+TLI G C R++DG+K+ Q
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M +EG G YN++++G + + A + M + P + + + G CV+
Sbjct: 337 M--YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G + A F+ M +V Y+ +IH C+ ++V EA EL + G P A T+
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454
Query: 415 NTVLSGLCRQG 425
++ GLC+ G
Sbjct: 455 TIMILGLCKNG 465
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 200/407 (49%), Gaps = 40/407 (9%)
Query: 96 RVGDGFKLL-HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TF 150
+ D F L +++SR + P+ V + ++ ++ K K L ME +D+ +F
Sbjct: 595 KFDDAFGLFCEMLQSRPI-PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSF 653
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ILI +C+ AL LL K GF P +VT+ +L C R +AV +++ E
Sbjct: 654 TILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G +E PNV YN +I+ C+ L++AL++F M+ GI +
Sbjct: 714 LG--------------LE-----PNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVAD 754
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDE 326
VTY+TLI GLC+ GR D ++L+ M K +I P + +++ +E E
Sbjct: 755 AVTYNTLISGLCNSGRWTDAARLLRDM------VKRKIDPNVIFFTALIDTFVKEGNLLE 808
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A K+M + P + + I GFC+ G + DAK FD M+ +G P+VV Y+ LI
Sbjct: 809 AKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLIT 868
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+C+ +RV + +L EMT G + A T+NT++ G C+ G + A K+ R + G
Sbjct: 869 GFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFN---RMVDCG 925
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ LC G + A +++ + + D +T+N ++
Sbjct: 926 VPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 205/454 (45%), Gaps = 30/454 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ F +L + K + + KM G+ D Y++ IL+ C +R L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L M G +P+ V +L++ C+ + A SL+ M E PN V ++ +I CK
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+L NAL + G V D VT ++ LC+ GR DA
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA----------------- 775
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
R L++M ++ PNV + LI ++ + G L A +++ +M + N +TY++LI
Sbjct: 776 --RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
G C GR+ D + LM +G + YN+++ G + + ++ ++ +M + L
Sbjct: 834 GFCIQGRLGDAKHMFDLM--VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
A + I G+C G + A++ F++M++ G P++V Y+ L+ C ++ +A
Sbjct: 892 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALV 951
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+++++ + T+N ++ G+CR V A L R +G + Y +I
Sbjct: 952 MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTR---KGVKLDAIAYITMIS 1008
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC G + A L +M G +P ++ L
Sbjct: 1009 GLCRNGLRREADKLCTRMKEDGFMPSERIYDETL 1042
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 188/399 (47%), Gaps = 30/399 (7%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ G+ + + LIH C+ ++ A S++ M +P+ VTF L+ +C
Sbjct: 91 MELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNR 150
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-------- 214
+ +A L+ G+ P+VV +++ LC G V A+E+L E ++GRL
Sbjct: 151 IHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYN 210
Query: 215 ---------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
G+ + R L++M ++ P+V T+ LI ++ + G LD A +++ M
Sbjct: 211 TLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
I N VTY++LI GLC GR+ K LM + +G + YN+++ G + + +
Sbjct: 271 SIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM--ASKGCFPNVVTYNTLINGFCKSRRVE 328
Query: 326 EALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ ++ ++M E L + I G+C G + AK F M+ G P+++ + L+
Sbjct: 329 DGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILL 388
Query: 384 HAYCQEERVREASELMKEM-TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
H C + A +M +G YL I + +N ++ GLC+ V A +L R
Sbjct: 389 HGLCVNGEIGSAMVKFNDMRSGEKYLGIVA-YNIMIHGLCKADKVEEAWELF---CRLPV 444
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
G P + Y+ +I LC+ G + A L +M GI+
Sbjct: 445 EGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 163/352 (46%), Gaps = 26/352 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ V F+ ++ A K + L K + G D+ + T ++ C R A+ +
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L GK M + G P++ T L++ +C+ A+ + + M
Sbjct: 673 L---------GK----------MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE 713
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ N V Y+T+I GLC +++ L+I ME K+G YN+++ GL +
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGME--KKGIVADAVTYNTLISGLCNSGRW 771
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+A L+ M K+ P + + I F +GN+ +AK + +MI PN++ Y+ L
Sbjct: 772 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I+ +C + R+ +A + M G P T+NT+++G C+ V +KL E
Sbjct: 832 INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTH--- 888
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+G + + Y+ LI C+ G A + +MV G+ PD +T+N LL CL
Sbjct: 889 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 175/401 (43%), Gaps = 46/401 (11%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ V F+ L+ A + ++ FG D+ + T ++ C R+ A+ I
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L GK M + G P++ T+ L+ +C + A + M
Sbjct: 123 L---------GK----------MMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK 163
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYR 320
G N V Y+TLI LC G ++ L++L ME KGR++ YN++L GL
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEME-----KKGRLAADLVTYNTLLTGLCY 218
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ +A L+ M K + P + I F GN+++A+ + QM++ PN V
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ LI+ C R+ A + M G P T+NT+++G C+ V +KL +
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQ 496
R G + + Y+ LI C+ G + A + MV G+ PD +T LL +C++
Sbjct: 339 R---EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNG 395
Query: 497 QTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
+ + MV F +++ + EK + + N + HG
Sbjct: 396 EIG-------SAMVKF----NDMRSGEKYLGIVAYNIMIHG 425
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 37/301 (12%)
Query: 10 DESIFITVIRGL---GR----ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
D + T+I GL GR AR++ D+VK + P++ F +++D VKE
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKR-------KIDPNVIFFTALIDTFVKEGNL 806
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L K+M+ V + TY L+ G C+ R+GD + +M S+G P+ V YNTL
Sbjct: 807 LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL 866
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGF 178
I CK+ +V L +M V T++ LI YC+ L A + + G
Sbjct: 867 ITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 926
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PD+VT +L+ LC+ G++ A+ ++E ++++ ++ T
Sbjct: 927 PPDIVTYNILLDCLCNNGKIEKALVMVE-------------------DLQKNQMDVDIIT 967
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNI+I C + A +F + G+ + + Y T+I GLC G + K+ M+
Sbjct: 968 YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027
Query: 299 D 299
+
Sbjct: 1028 E 1028
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 208/509 (40%), Gaps = 28/509 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARA 66
P+ + ++I GL + K DL++ P++ +N++++ K D +
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F R M G+ GD +TY L+ G C ++ + M S GV P+ + + L+H L
Sbjct: 334 FQR--MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391
Query: 127 CKNGKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C NG++G A +DM V ++I+I CK + + A L + G PD
Sbjct: 392 CVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDA 451
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T ++ LC G +A E+ E G + + + G + G V I+
Sbjct: 452 RTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDG-----HLGEHGTNNQVSLGTII 506
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +++S D++ + + V + G + L +L+ + +
Sbjct: 507 ICPKRRRSIMESG-DLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPES 565
Query: 303 GS-KGRISPYNSVLYGLYRENQQ--------DEALEYLKQM--EKLFPRAVDRSLKILGF 351
S G ++ + YRE + D+A +M + P VD + +
Sbjct: 566 RSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAI 625
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+ F +M G ++ + LIH +C+ R A L+ +M G+ P
Sbjct: 626 AKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSI 685
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T ++L+G C+ A+ LV+ M +G P Y+ +I LC+ +A +
Sbjct: 686 VTLGSLLNGFCQGNRFQEAVSLVDS-MAELGLE--PNVVIYNTVINGLCKNRDLNNALEI 742
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQTTW 500
M KGI+ D +T+N+L+ L W
Sbjct: 743 FYGMEKKGIVADAVTYNTLISGLCNSGRW 771
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 74/187 (39%), Gaps = 39/187 (20%)
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVV-------------------------------- 377
GF EDA F +M++ +P+VV
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 378 ---IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ LIH +C+ R+ A ++ +M GY P TF ++L G C + + A LV
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL-PDYLTWNSLLIC 493
++ G P Y+ LI LC+ G A LL +M KG L D +T+N+LL
Sbjct: 159 ASMVKS---GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215
Query: 494 LSQQTTW 500
L W
Sbjct: 216 LCYSGEW 222
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 197/389 (50%), Gaps = 25/389 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M SG++ + Y+ L++G C + R D K+ M +G++P+ V+Y LI SLCK G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K +A +M M EPN VT+++LI CKE ++ A+ +L+K G PDVVT
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294
Query: 187 KVLELLCSVGRVMDAVEILEE----------------SGEQG--RLGKVKGGCRFLKEME 228
+++ L V + +A+ +LEE S QG +G+++ + ME
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC+ N+ TYN+LI + A+++ ++M G+ + TY LI+G C ++D
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP-RAVDRSLK 347
+L M D G + + Y +L + + + A +M+ FP V S
Sbjct: 415 RAEDLLSTMRD--RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C G+++ AK +++EG P+ V Y +I+ + + + A+ ++K+MT G+
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
LP + F++++ G +G + L+L+ E
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELIRE 561
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 226/506 (44%), Gaps = 71/506 (14%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS--GVQGDDYTYAILM 88
+AT L+ +N++L L + D A A R + + + +Y +LM
Sbjct: 63 EATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EE 144
+ LC LL M+S GV+ + V Y TLI LC +V +A LM +M E
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN V +S L+ YCK + + + G PDVV T +++ LC VG+ A +
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
++ M R+G PNV TYN+LI+ C+ G + A+ V M
Sbjct: 243 MDM-------------------MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSE 283
Query: 265 DGISWNFVTYDTLIR-------------------------------------GLCSGGRI 287
G++ + VTY+TLI+ GLC GR+
Sbjct: 284 KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRM 343
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++ +ME++ G + YN ++ GL R ++ +A+E + +M L P + S
Sbjct: 344 RQAFQVRAMMEET--GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I GFC V+ A+ M + G P + Y L+ A C++ + A L EM +
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN 461
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
L + + ++T++ G C+ G++ TA +L++ + G P + YS +I + G
Sbjct: 462 FPLDVVA-YSTMIHGACKAGDLKTAKELLKSI---VDEGLTPDAVTYSIVINMFAKSGDM 517
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
++A+ +L QM G LPD ++SL+
Sbjct: 518 EAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 205/448 (45%), Gaps = 32/448 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAF 67
D + T+IRGL A ++ V+ + + P++ +++S+L K D+ + F
Sbjct: 149 DVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVF 208
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M G++ D Y L+ LC + ++ +M RG++PN V YN LI+ +C
Sbjct: 209 V--EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMC 266
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV--PD 181
K G V A ++ M E P+ VT++ LI + A+ LLE+ + P+
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
VVT V++ LC +GR+ A ++ E G R+ KV+ +
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM G P+ TY+ILI +C+ +D A D+ + M+ GI Y L+ +C G
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
++ + M+++ + Y+++++G + A E LK + E L P AV
Sbjct: 447 MMERARNLFNEMDNNFPLD---VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S+ I F G++E A QM G +P+V ++D LI Y + + + EL++EM
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+ + S + LS N G AL
Sbjct: 564 TKN-IALDSKIISTLSTSLVASNEGKAL 590
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 183/394 (46%), Gaps = 35/394 (8%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDME-------EPNDVTFSILICAYCKEENLVNAL 167
++V YNT++ +LC+ G RA +L+ M PN V++++L+ A C + A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
LL S G DVVT ++ LC V AVE++ EM
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM-------------------GEM 176
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G PNV Y+ L+ YC++G + VF +M GI + V Y LI LC G+
Sbjct: 177 CESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKA 236
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++ +M + G + + YN ++ + +E EA+ LK+M + + P V +
Sbjct: 237 KKAHGVMDMM--VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYDCLIHAYCQEERVREASELMKEMT 403
I G +++A ++M+ + PNVV ++ +I C R+R+A ++ M
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G + T+N ++ GL R V A++L++E M +G P S YS LIK C+
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE-MTSLGLE--PDSFTYSILIKGFCKMW 411
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A LL M +GI P+ + LL+ + +Q
Sbjct: 412 QVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQ 445
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLME-DSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
V+Y+T++ LC G D +L+ M + + Y ++ L + D+A+
Sbjct: 78 VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGL 137
Query: 331 LKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L+ M RA V I G C V+ A +M E G PNVV+Y L+ YC+
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
R + ++ EM+ G P + ++ LC+ G A +++ +R RG P
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR---RGLEPN 254
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS-----QQTTWLL 502
Y+ LI +C++G + A +L +M KG+ PD +T+N+L+ LS + WLL
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 157/349 (44%), Gaps = 64/349 (18%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD ++ +I L G+A+ + V+ D++ R + P++ +N +++ + KE
Sbjct: 218 PDVVMYTGLIDSLCKVGKAKKAHGVM---DMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG---VKPNSVIYNTL 122
KKM GV D TY L+KGL + + LL M RG VKPN V +N++
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVKPNVVTFNSV 333
Query: 123 IHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I LC G++ +A + + MEE N VT+++LI + + A+ L+++ S G
Sbjct: 334 IQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393
Query: 179 VPDVVTITKVLELLC---SVGRVMDAVEILEESG----------------EQGRLGKVK- 218
PD T + +++ C V R D + + + G EQG + + +
Sbjct: 394 EPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARN 453
Query: 219 ---------------------GGCR---------FLKEMERKGCLPNVDTYNILISSYCE 248
G C+ LK + +G P+ TY+I+I+ + +
Sbjct: 454 LFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+G +++A V M G + +D+LI+G + G I+ L++++ M
Sbjct: 514 SGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 224/491 (45%), Gaps = 42/491 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAFYRKKM 72
F +I A M V++ L+ F+ P L FN IL LV KE LA A Y +M
Sbjct: 131 FSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVY-NQM 189
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ + D TY IL+ GLC T + D L M RG+ PN +IY+ ++ LC+ K+
Sbjct: 190 LKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKI 249
Query: 133 GRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A+ L S M + +T+++L+ +CK L +A LL+ G + V+ +
Sbjct: 250 FDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCL 309
Query: 189 LELLCSVGRVMDA----VEILEESGEQGRL------------GKVKGGCRFLKEMERKGC 232
+ L R +A ++L E+ + + G+V L EM +G
Sbjct: 310 INGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGL 369
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+ YN LI +C+ G LD A + ++ N TY LI G+C G I+
Sbjct: 370 RPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQH 429
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-----KLFPRAVDRSLK 347
I + ME K G + +NS++ GL + N+ +EA QME LF R + K
Sbjct: 430 IFKEME--KLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487
Query: 348 ILG----------FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
+ C G + A + Q+++ G +P++ Y+ LI+ +C+ + A +
Sbjct: 488 VFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFK 547
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L KEM G++P + T+ T++ GL R G AL++ E+ + +G +P S Y ++
Sbjct: 548 LFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQ---MVKKGCVPESSTYKTIMT 604
Query: 458 ALCEKGGFQSA 468
C + A
Sbjct: 605 WSCRENNISLA 615
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 203/443 (45%), Gaps = 74/443 (16%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNG---KVGRARSLMSDME-EPNDVTFSILICA 156
+K+L +K+ +K +S ++ LI + + G K + LM D + +P+ F++++
Sbjct: 113 WKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHF 172
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
++E + AL + + PDVVT ++ LC + DA+ + +E
Sbjct: 173 LVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDE--------- 223
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M +G LPN Y+I++S C+ + A +F+ M+ G + + +TY+
Sbjct: 224 ----------MTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNV 273
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
L+ G C G +DD +LQL+ +K+G + Y ++ GL+R + +EA + ++M
Sbjct: 274 LLNGFCKSGYLDDAFTLLQLL--TKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC------Q 388
E + P + ++ I G +G V +A +M E G P+ + Y+ LI +C +
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391
Query: 389 EERVR-----------------------------EASELMKEMTGHGYLPIASTFNTVLS 419
E +R +A + KEM G LP TFN++++
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSL-----PGS------GHYSPLIKALCEKGGFQSA 468
GLC+ + A +L+ M + + SL G+ +++ LCE G A
Sbjct: 452 GLCKANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKA 510
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
LL+Q+V G+LPD T+N L+
Sbjct: 511 YKLLMQLVDSGVLPDIRTYNILI 533
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 13/263 (4%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+++I + + V ++K I + + LI G + ++ LM D
Sbjct: 97 DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K + +N +L+ L R+ AL QM K L P V + I G C
Sbjct: 157 F--DCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKT 214
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+DA FD+M + G +PN +IY ++ CQ +++ +A L +M G T+N +
Sbjct: 215 QDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVL 274
Query: 418 LSGLCRQG---NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
L+G C+ G + T L+L+ +D G + G Y LI L ++ A M +
Sbjct: 275 LNGFCKSGYLDDAFTLLQLLTKD------GHILGVIGYGCLINGLFRARRYEEAHMWYQK 328
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ + I PD + + ++ LSQ+
Sbjct: 329 MLRENIKPDVMLYTIMIRGLSQE 351
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 175/436 (40%), Gaps = 42/436 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD ++ +IRGL + + + + ++ + P +N+++ +D A +
Sbjct: 336 PDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL 395
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R ++ +++TY+IL+ G+C + + M+ G P+ V +N+LI+ LC
Sbjct: 396 -RLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLC 454
Query: 128 KNGKVGRARSLMSDME------------EPNDVTFSI-----LICAYCKEENLVNALVLL 170
K ++ AR L ME + D F I ++ C+ ++ A LL
Sbjct: 455 KANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLL 514
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RL 214
+ G +PD+ T ++ C G + A ++ +E +G R
Sbjct: 515 MQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRA 574
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G+ + ++M +KGC+P TY +++ C + AL V+ D W
Sbjct: 575 GRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWE---- 630
Query: 275 DTLIRGLCSGGRIDD-GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
D +R + ++ I +L+E + ++PY L GL + + EA
Sbjct: 631 DEKVRVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSV 690
Query: 334 ME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
++ K+ + + I C+ N++ A F +E G I + L+ +R
Sbjct: 691 LKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLERGFRLMPPICNQLLCNLLHLDR 750
Query: 392 VREASELMKEMTGHGY 407
+A L M GY
Sbjct: 751 KDDALFLANRMEASGY 766
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/540 (25%), Positives = 239/540 (44%), Gaps = 64/540 (11%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--------- 54
++ PP+ + V+R L I D + D + R P +++ IL+
Sbjct: 152 AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFR 211
Query: 55 --VLVKED-------------------------IDLARAFYRKKMMASGVQGDDYTYAIL 87
V V ED +D A R + + G + D +Y +
Sbjct: 212 SAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRD-LPSFGCEPDVVSYNAV 270
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--- 144
+KGLC+ R G +L+ M PN V +NTLI LC+NG R +++ M E
Sbjct: 271 LKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGC 330
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ ++ +I CKE +L A +L + S+G P+VV +L+ LCS R + E
Sbjct: 331 TPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEE 390
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L E ++ + G V L++M GC+P+V TY +I+ +C
Sbjct: 391 LLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFC 450
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G++D A+ + M G N ++Y +++GLCS R D ++ M ++G
Sbjct: 451 KEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQM--IQQGCPLN 508
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+N+++ L ++ ++A+E LKQM P + S I G G ++A +
Sbjct: 509 PITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLN 568
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M+ +G PN +IY + A +E R+ + ++ + A +N V+S LC++G
Sbjct: 569 VMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRG 628
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
A++ + + G +P Y+ LI+ L +G + A +L ++ KG L +L
Sbjct: 629 ETERAIEFLA---YMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHL 685
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 215/451 (47%), Gaps = 33/451 (7%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ A V + YTY +++ LC R+ D +L M RG P +Y+ ++ + C+
Sbjct: 147 RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 206
Query: 129 NGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G A ++ D+ DV ++++ A C + ++ AL LL SFG PDVV+
Sbjct: 207 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVS 266
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
VL+ LC R E++EE M R C PN+ T+N LIS
Sbjct: 267 YNAVLKGLCMAKRWGCVQELMEE-------------------MVRMACPPNIVTFNTLIS 307
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C G+ + +V M G + + Y T+I G+C G ++ +IL M G
Sbjct: 308 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSY--GL 365
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
K + YN++L GL + +E E L +M +K P D + IL FC +G V+
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD-DVTFNILVDFFCQNGLVDRVI 424
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+QM+E G +P+V+ Y +I+ +C+E + EA L+K MT G P ++ VL GL
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C A L+ + I +G ++ LI LC+KG + A LL QM+ G
Sbjct: 485 CSAERWVDAEDLMSQ---MIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCS 541
Query: 482 PDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
PD +++++++ L + T L LLN MV+
Sbjct: 542 PDLISYSTVIDGLGKAGKTDEALELLNVMVN 572
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 18/268 (6%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN +++ YC G L+SA + + + N TY ++R LC+ GRI D L +L M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPP---NAYTYFPVVRALCARGRIADALAVLDEM- 185
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV-----DRSLKILGFCV 353
+ G Y+ +L R A+ L E L R + +L + C
Sbjct: 186 -PRRGCAPIPPMYHVILEAACRGGGFRSAVRVL---EDLHARGCALDVGNCNLVLNAICD 241
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G+V++A + G P+VV Y+ ++ C +R ELM+EM P T
Sbjct: 242 QGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVT 301
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
FNT++S LCR G + V E + + + G P Y+ +I +C++G + A +L
Sbjct: 302 FNTLISYLCRNG----LFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEIL 357
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQTTW 500
+M G+ P+ + +N+LL L W
Sbjct: 358 NRMPSYGLKPNVVCYNTLLKGLCSAERW 385
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/480 (25%), Positives = 232/480 (48%), Gaps = 32/480 (6%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
IQ P + F V+ RA + + ++ ++ + + P+L + N+ + VLV ++
Sbjct: 114 IQRTPQD--FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEK 171
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ ++M G+ + TY L+KG C +RV D +L+ M +G P+ V Y T++
Sbjct: 172 ALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMG 231
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCKN ++ ++ ME+ + VT++ LI CK ++ AL L ++ GF
Sbjct: 232 FLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQV 291
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D V + +++ C GR+ A EI + EM +GC+P+V TY
Sbjct: 292 DKVGYSAIVDSYCKEGRMDQAKEI-------------------VNEMFTRGCIPDVVTYT 332
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+I+ + + G + A + M G N V+Y ++GLC G + ++++ E+
Sbjct: 333 AIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEE- 391
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ + I+ Y+ V++G RE + +A + +++M + FP V+ +L + C G V+
Sbjct: 392 QWWTPNAIT-YSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVD 450
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+AK+ ++ + G N V + +IH +CQ++ + A L+ +M P A T+ T++
Sbjct: 451 EAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTII 510
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
L ++G + A +L ++ + +G P Y +I + G + LL +M+ +
Sbjct: 511 DALGKKGRIEEATELT---LKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR 567
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 226/509 (44%), Gaps = 42/509 (8%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTY 84
R+ D +D R+ P ++ +LDVL K + + M+ G+Q +
Sbjct: 64 RVALDFFFWSDRQWRYRHDPI--VYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDF 121
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
+M ++ + ++L +M+ G++PN ++ NT IH L + +A + M+
Sbjct: 122 CCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQL 181
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
PN VT++ LI YC + +A+ L+ + G PD V+ V+ LC R+ +
Sbjct: 182 LGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIRE 241
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
++++E+ ME L + TYN LI C+ D AL
Sbjct: 242 VMDVIEK-------------------MEDTKLLADQVTYNTLIHMLCKHQHADEALQFLR 282
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+ + G + V Y ++ C GR+D +I+ M G + Y +++ G +
Sbjct: 283 EAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEM--FTRGCIPDVVTYTAIINGFSQ 340
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ +A + L+QM K P V + + G C GN +A+ E+ PN +
Sbjct: 341 AGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAIT 400
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y ++H + +E ++ +A ++++EM G G+ P N +L LCR G V A K +EE
Sbjct: 401 YSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEE-- 458
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS--- 495
+ G + +++ +I C++ ++A LL M PD +T+ +++ L
Sbjct: 459 -CLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKG 517
Query: 496 --QQTTWLLLLLLNE-----MVSFVMVVH 517
++ T L L +L + V++ V+H
Sbjct: 518 RIEEATELTLKMLKKGIDPTPVTYRTVIH 546
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 26/291 (8%)
Query: 49 FNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+++I+D KE +D A+ +M G D TY ++ G VG K+L M
Sbjct: 296 YSAIVDSYCKEGRMDQAKEIV-NEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQM 354
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
G KPN+V Y + LC+ G AR +M EE PN +T+S+++ + +E L
Sbjct: 355 YKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKL 414
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
+A ++ + GF P V I +L+ LC +GRV +A + +EE G
Sbjct: 415 SDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTV 474
Query: 213 -----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+ ++ L +M P+ TY +I + + G ++ A ++ M GI
Sbjct: 475 IHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGI 534
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
VTY T+I GR++D L +L M +E + +N V+ L
Sbjct: 535 DPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTRQECR----TAFNQVIEKL 581
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 6/206 (2%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F TVI + I + D + N P + +I+D L K+ KM+
Sbjct: 471 FTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKML 530
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ TY ++ RV D LL M +R + +N +I LC G +
Sbjct: 531 KKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR--QECRTAFNQVIEKLCTFGNLE 588
Query: 134 RARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A L+ + + T +L+ +Y ++ ++A + + FS +PD+ KV
Sbjct: 589 AADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVC 648
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLG 215
+ L G+ +A + E+G +
Sbjct: 649 KKLMQEGKSEEADNLFLRFVERGNIS 674
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 230/503 (45%), Gaps = 38/503 (7%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDI-DLAR 65
E FI V R G+A + + KA DL R F S+K FNS+L+V++ E +
Sbjct: 112 ERSFIVVFRAYGKAHLPD---KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL 168
Query: 66 AFYR---KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
FY M + + ++ +++K LC V ++ M R P+ Y TL
Sbjct: 169 EFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTL 228
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ LCK ++ A L+ +M+ P+ V +++LI CK+ +L L++ F G
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC 288
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+ VT ++ LC G++ AV +LE M C+PN T
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLER-------------------MVSSKCIPNDVT 329
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y LI+ + A+ + + M+ G N Y LI GL G+ ++ + + + M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM- 388
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+++G K I Y+ ++ GL RE + +EA E L +M P A S + GF G
Sbjct: 389 -AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
E+A + + +M + G N Y LI C RV+EA + +M G P +++
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ GLC G++ ALKL E + S P Y+ L+ LC + A LL M+
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 477 GKGILPDYLTWNSLLICLSQQTT 499
+G PD +T N+ L LS+++
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSN 590
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 197/454 (43%), Gaps = 53/454 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T++ GL + I++ V D + +PS I+N ++D L K+ DL R
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG-DLTRVTK 278
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G ++ TY L+ GLCL ++ LL M S PN V Y TLI+ L
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + A L+S MEE N +S+LI KE A+ L K G P++V
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +++ LC G+ +A EIL M GCLPN TY+ L+
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILN-------------------RMIASGCLPNAYTYSSLM 439
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +TG+ + A+ V+ +M G S N Y LI GLC GR+ + + + M G
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI--G 497
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-----EKLFPRAVDRSLKILGFCVDGNVE 358
K Y+S++ GL D AL+ +M K P V ++ + G C+ ++
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---------------------ERVREASE 397
A + M++ G P+V+ + ++ ++ +RV A
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACT 617
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+++ M G P ST+ ++ +C+ + A+
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 17/262 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ ++ GL R N+ + + + P+ ++S++ K +
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M +G + + Y++L+ GLC RV + + M + G+KP++V Y+++I LC
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514
Query: 129 NGKVGRARSLMSDM-------EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
G + A L +M +P+ VT++IL+ C ++++ A+ LL G PD
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Query: 182 VVTITKVLELL------CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
V+T L L C GR ++ Q +V G C ++ M K P
Sbjct: 575 VITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQ----RVSGACTIVEVMLGKYLAPK 630
Query: 236 VDTYNILISSYCETGVLDSALD 257
T+ +++ C+ +++A+D
Sbjct: 631 TSTWAMIVREICKPKKINAAID 652
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 136/507 (26%), Positives = 226/507 (44%), Gaps = 30/507 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD V+R L A +D+ + + + PS+ +N++LD +KE + A
Sbjct: 200 PDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAML 259
Query: 69 RKKM--MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+M SG +D T+ +++ GL + + +++ M+ K +S YN LI L
Sbjct: 260 LKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASSFTYNPLITGL 318
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G V +A L +ME P VT++ +I + + A V + + G PDV
Sbjct: 319 LAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDV 378
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
+T +L C G + +A+ + + G RLG ++ R +E
Sbjct: 379 ITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEE 438
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +GCLP+V TY IL+ L A + F++M G+ + Y+T IR + G
Sbjct: 439 MVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGA 498
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
I ++ ++M EG YN ++ GL + ++A + +M L P +
Sbjct: 499 IAKAFRLREVM--MLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITY 556
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I C G + +A++ F MI +G P+ V Y IHAYC+ + A ++M
Sbjct: 557 TCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLE 616
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T+N ++ LCR G A + E + RG +P Y+ LI C++G
Sbjct: 617 EGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLE---RGLVPNKYTYTLLIDGNCKEGN 673
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
++ A +M GI PDYLT +L
Sbjct: 674 WEDAMRFYFEMHQNGIHPDYLTHKALF 700
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 24/227 (10%)
Query: 63 LARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+A+AF R+ MM G+ D TY IL+ GLC T + D L M G++P+ + Y
Sbjct: 499 IAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTC 558
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LIH+ C+ G + AR DM P+ VT+++ I AYC+ NL +A K G
Sbjct: 559 LIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEG 618
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P+ +T ++ LC GR A R EM +G +PN
Sbjct: 619 VEPNEITYNVLIHALCRTGRTQLAY-------------------RHFHEMLERGLVPNKY 659
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
TY +LI C+ G + A+ + +M +GI +++T+ L +G G
Sbjct: 660 TYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEG 706
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 123/270 (45%), Gaps = 6/270 (2%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
EM G P+V N ++ + D V +M GI + VTY+TL+
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
GR D +L+ ME G +N V+ GL R+ +EA E ++ M +L +A
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKASS 308
Query: 344 RSLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I G G V+ A +M EG +P VV Y+ +IH Q +V A E
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G P T+N++L+G C+ G++ AL L+ D+R G P Y+ LI C
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEAL-LLFGDLRHAGLA--PTVLTYNILIDGYCR 425
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + A L +MV +G LPD T+ L+
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTILM 455
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +KM+ GV+ ++ TY +L+ LC T R ++ H M RG+ PN Y LI C
Sbjct: 610 WFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNC 669
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
K G A +M + P+ +T L + E ++ +A+ LE +
Sbjct: 670 KEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLENA 718
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 227/499 (45%), Gaps = 41/499 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARA 66
PP+ + VI R ++ A V R T F+ +L L K+ A
Sbjct: 88 PPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMD 147
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM-----KSRGVKPNSVIYNT 121
++M G + ++Y IL+KGLC NR LLH M G P+ V YNT
Sbjct: 148 IALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNT 207
Query: 122 LIHSLCKNGK-VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I+ L + G+ + A L M + P+ VT++ +I A K + A V+L +
Sbjct: 208 VINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKN 267
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G +P+ +T +L CS G+ DA+ + K M R G P+V
Sbjct: 268 GAMPNRITHNSLLHGYCSSGKPNDAIGVF-------------------KRMCRDGVEPDV 308
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN L+ C+ G A +F+ M G N TY TL+ G + G + +L +
Sbjct: 309 FTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDM 368
Query: 297 MEDSKEGSKGRISPYNSVLYGLY-RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
M + G + +N +L G Y + + D+A+ +M + L P V + + C+
Sbjct: 369 M--VRNGIQPDHYIFN-ILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCM 425
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G V+DA F ++I EG P+ V++ LIH C ++ +A EL EM G G P
Sbjct: 426 VGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIF 485
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
FNT+L+ LC++G V A + + +R + R + Y+ LI C G A+ LL
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT----YNTLIDGYCLHGKVDEAAKLL 541
Query: 473 VQMVGKGILPDYLTWNSLL 491
MV G+ P+ +T+N+++
Sbjct: 542 EGMVLDGVKPNEVTYNTMI 560
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 221/517 (42%), Gaps = 36/517 (6%)
Query: 8 PPDESIFITVIRGLGR-ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PPD + TVI GL R R ++ D + ++P + +NSI+ L K A
Sbjct: 199 PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAA 258
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+M+ +G + T+ L+ G C + + D + M GV+P+ YNTL+ L
Sbjct: 259 VVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYL 318
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKNG+ AR + M +PN T+ L+ Y E +LV LL+ G PD
Sbjct: 319 CKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDH 378
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
++ G+V DA+ + + QG +GKV
Sbjct: 379 YIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGR 438
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ +G P+ + LI C D A ++ +M GI N + ++TL+ LC G
Sbjct: 439 LISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGM 498
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ I LM + + + YN+++ G + DEA + L+ M + + P V
Sbjct: 499 VARAKNIFDLM--VRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTY 556
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G+C +G +EDA F QM +G P +V Y ++ Q R A EL M
Sbjct: 557 NTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIK 616
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEE----DMRGIGRGSLPGSGHYSPLIKALC 460
G T+N +L GLC+ AL++ + D R ++ +I AL
Sbjct: 617 SGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRT-------FNIMIDALL 669
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ G A L ++ +G++P+ +T+ ++ L +Q
Sbjct: 670 KGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 706
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 210/470 (44%), Gaps = 38/470 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + T++ G + + D++ R + P IFN ++ K +D A
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D TY I+M LC+ +V D + S G+ P++V++ LIH LC
Sbjct: 401 F-SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLC 459
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A L +M PN++ F+ L+ CKE + A + + DV+
Sbjct: 460 ARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVI 519
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C G+V +A ++LE G V G + PN TYN +I
Sbjct: 520 TYNTLIDGYCLHGKVDEAAKLLE--------GMVLDGVK-----------PNEVTYNTMI 560
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+ G ++ A +F M G++ VTY T+++GL R ++ M K G
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWM--IKSG 618
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAK 361
K I YN +L GL + N D+AL + + + +R+ I+ G ++AK
Sbjct: 619 IKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAK 678
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F ++ G VPNVV Y ++ + ++ + E +L + +G + N ++ L
Sbjct: 679 DLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKL 738
Query: 422 CRQGNV---GTALKLVEEDMRGIGRGS------LPGSGHYSPLIKALCEK 462
++G V G L ++E+ + + L SG Y I A+ EK
Sbjct: 739 LQKGEVRKAGVYLSKIDENNFSLEASTAESLVLLVSSGKYDQHINAIPEK 788
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 182/408 (44%), Gaps = 27/408 (6%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICA 156
F+ + ++ V PN + Y+ +I + G + A + + + +TFS L+ A
Sbjct: 76 FRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKA 135
Query: 157 YCKEENLVNAL-VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
C ++ A+ + L + G P+V + T +L+ LC R A+ +L
Sbjct: 136 LCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLH--------- 186
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG-VLDSALDVFNDMKIDGISWNFVTY 274
+ + R G P+V +YN +I+ G LD+A +F+ M G+S + VTY
Sbjct: 187 -----TMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTY 241
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+++I L +D +L M K G+ +NS+L+G + ++A+ K+M
Sbjct: 242 NSIISALSKARAMDKAAVVLVRM--VKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRM 299
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ + P + + C +G +A++ FD M++ G PN Y L+H Y E +
Sbjct: 300 CRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSL 359
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+ L+ M +G P FN ++ + G V A+ L + R +G P + Y
Sbjct: 360 VKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRR---QGLNPDTVTY 416
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++ ALC G A +++ +G+ PD + + +L+ L + W
Sbjct: 417 GIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKW 464
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 214/442 (48%), Gaps = 35/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P L + ++++ L K DIDLA
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A+ ++ + + ++ LC V L M+++G++PN V YN+LI+ LC
Sbjct: 246 L-NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+S+M E PN VTF+ LI A+ KE LV A L E+ PD +
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C R+ +A ++ K M K CLPN+ TYN LI
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMF-------------------KFMVSKDCLPNIQTYNTLI 405
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ ++ +++F +M G+ N VTY T+I+G G D + + M ++
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
+ I Y+ +L+GL + D AL +YL++ E + ++ I G C G V +A
Sbjct: 466 TD--IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM-IEGMCKAGKVGEA 522
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+D P+VV Y+ +I C + ++EA +L ++M G LP + T+NT++
Sbjct: 523 ---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R + + +L++E MR G
Sbjct: 580 NLRDCDRAASAELIKE-MRSSG 600
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 215/441 (48%), Gaps = 36/441 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D +T+ L+ GL L N+ + L+ M RG +P+ V Y T+++ LCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L++ ME + N V F+ +I + CK ++ A+ L + + G P+VVT
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L E+ + GK+ + +EM ++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+ TYN+LI+ +C LD A +F M N TY+TLI G C R++DG
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G Y +++ G ++ D A KQM ++ + S+ +
Sbjct: 418 VELFREM--SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G ++ A F + + N+ IY+ +I C+ +V EA +L ++
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK--- 532
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A + ++ED G+LP SG Y+ LI+A
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKED------GTLPNSGTYNTLIRANLRDCDR 586
Query: 466 QSASMLLVQMVGKGILPDYLT 486
+++ L+ +M G + D T
Sbjct: 587 AASAELIKEMRSSGFVGDAST 607
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 233/485 (48%), Gaps = 37/485 (7%)
Query: 19 RGLGRARMINDVVKATDLVSRF-NMT-----PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
R + R R+ +D++K D V F +M PS+ FN +L + K + ++M
Sbjct: 51 REILRNRL-SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D YTY+I + C +++ +L M G +P+ V ++L++ C + ++
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +L+ M E P+ TF+ LI A+ L+++ G PD+VT V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC G + A+ +L + ME NV +N +I S C+
Sbjct: 230 VNGLCKRGDIDLALNLLNK-------------------MEAARIKANVVIFNTIIDSLCK 270
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
++ A+D+F +M+ GI N VTY++LI LC+ GR D ++L M + K +
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN--V 328
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
+N+++ ++E + EA + ++M + P + +L I GFC+ +++AK+ F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+ + +PN+ Y+ LI+ +C+ +RV + EL +EM+ G + T+ T++ G + G+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+A ++V + M + YS L+ LC G +A ++ + + +
Sbjct: 449 CDSA-QMVFKQM--VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 487 WNSLL 491
+N+++
Sbjct: 506 YNTMI 510
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 7/275 (2%)
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
ER + D IL + + +D A+D+F DM + V ++ L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+ + + + M+ G + Y+ + R +Q AL L +M KL P V S
Sbjct: 100 ELVISLGEQMQ--TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+C + DA DQM+E G P+ + LIH + EA L+ +M
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+ TV++GLC++G++ AL L+ + + ++ ++ +I +LC+
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV---IFNTIIDSLCKYRHV 274
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ A L +M KGI P+ +T+NSL+ CL W
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 215/448 (47%), Gaps = 35/448 (7%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMA 74
VI +++++ + + L+ +PS FN+ LD+L K ++D F+ + +
Sbjct: 43 AVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL-- 100
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
Q D Y++ I +K C V GF+LL M++ GV PN IY LI + C+NG + +
Sbjct: 101 GRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQ 160
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A+ + S M++ N ++I+I + K+ + L +K G +P++ T ++
Sbjct: 161 AKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT 220
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
C G++ A ++ +E ++G R G+V L+ M+R P
Sbjct: 221 EYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINP 280
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
T+N+L+ C TG LD AL +K+ G+ VTY+ LI G G +++
Sbjct: 281 TTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELV 340
Query: 295 QLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
+ MED ISP Y ++ R + ++A E M++ L P + I
Sbjct: 341 REMEDRG------ISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLI 394
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C+ GN+ +A + + M+E PN VIY+ +I+ YC+E +A + ++EM +G
Sbjct: 395 HGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVT 454
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE 436
P +++ + + LC+ G A +L++E
Sbjct: 455 PNVASYISTIQILCKDGKSIEAKRLLKE 482
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 192/440 (43%), Gaps = 64/440 (14%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---EEPNDVTFSILIC 155
D FKL+ + +G P+S +N + L K+G + R ++ + + +F I I
Sbjct: 59 DSFKLMVL---KGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFGITIK 115
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
A+C+ N+ LL + + G P+V T ++E C G + A + + G
Sbjct: 116 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 175
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+ G K G ++M+ G LPN+ TYN LI+ YC G L A VF
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+++ G++ N VTY+ LI GLC G++ +L+ M+ + R +N ++ GL
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRT--FNMLMDGLC 293
Query: 320 RENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGN--------------------- 356
Q D+AL YL++++ L P V ++ I GF GN
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353
Query: 357 --------------VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+E A F M G VP+ Y LIH C + + EAS+L K M
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P +NT+++G C++ N ALK +EE ++ G P Y I+ LC+
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK---NGVTPNVASYISTIQILCKD 470
Query: 463 GGFQSASMLLVQMVGKGILP 482
G A LL +M G+ P
Sbjct: 471 GKSIEAKRLLKEMTEAGLKP 490
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F ++ GL ++ + + + + P+L +N ++ K +
Sbjct: 280 PTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSEL 339
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G+ TY ILM ++ + +++ H+MK G+ P+ Y LIH LC
Sbjct: 340 VREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 399
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M E PNDV ++ +I YCKE N AL LE+ G P+V +
Sbjct: 400 KGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 459
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG 212
+++LC G+ ++A +L+E E G
Sbjct: 460 YISTIQILCKDGKSIEAKRLLKEMTEAG 487
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
D +I+A Q + + ++ + K M G+ P + +FN L L + GN+ E +
Sbjct: 42 DAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL- 100
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
GR + IKA CE G LL QM G+ P+ + L+
Sbjct: 101 --GRTQFDVYS-FGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILI 149
>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Cucumis
sativus]
Length = 830
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 233/498 (46%), Gaps = 45/498 (9%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR 65
+P E +I GL + D + ++ + PS+ N+I+ K ID+AR
Sbjct: 233 APQSECTTSILIHGLCEQSKLEDAISFLHDSNKV-VGPSIVSINTIMSKFCKVGLIDVAR 291
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ + M+ +G+ D ++Y IL+ GLC+ + + M+ GV+P+ V YNTL
Sbjct: 292 SXF-CLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKG 350
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
G + AR ++ M P+ VT++ LIC +C+ N+ AL L +++ S GF +
Sbjct: 351 FLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLN 410
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
V+ +L LC VGR+ +A+ + + EME P+ Y+I
Sbjct: 411 VIFYNMLLSCLCKVGRIEEALTLFD-------------------EMETLRLEPDFIVYSI 451
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID------DGLKILQ 295
LI C+ G + A ++ M++ + ++ GL G I D +
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEK-LFPRAVDRSLKILGFCV 353
LMED + YN ++ G R + EA++ Y K +E+ + P V + I GFC
Sbjct: 512 LMED--------VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCR 563
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G++ +A++ + + +G VP+VV Y L++AYC+ ++E + EM + +P T
Sbjct: 564 RGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVT 623
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ ++ GLCRQ + +L+L+E +G LP S Y+ +I+ C+ A L
Sbjct: 624 YTVLIKGLCRQNKMHESLQLLE---YMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYN 680
Query: 474 QMVGKGILPDYLTWNSLL 491
M+ P +T+ L+
Sbjct: 681 MMLLHNCDPTQVTYKVLI 698
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 228/486 (46%), Gaps = 42/486 (8%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD 81
R MI+D + + N S+ +NS+L + DI ++ SG +
Sbjct: 181 SRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWD---VYNEIKVSGAPQSE 237
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
T +IL+ GLC +++ D LH ++ V P+ V NT++ CK G + ARS
Sbjct: 238 CTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCL 296
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M + + +++IL+ C ++ AL + G PDVVT + + G
Sbjct: 297 MVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAK-----GF 351
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
++ LG + G + +++M +G P++ TY LI +C+ G ++ AL
Sbjct: 352 LL--------------LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALK 397
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNS 313
+ + G N + Y+ L+ LC GRI++ L + ME R+ P Y+
Sbjct: 398 LRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETL------RLEPDFIVYSI 451
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+++GL +E A + +QM ++ FP + +LG +GN+ +A+ FD
Sbjct: 452 LIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMD 511
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+ +VV+Y+ +I Y + + + EA +L +M G P TFNT+++G CR+G++ A
Sbjct: 512 LMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEAR 571
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K++E +G +P Y+ L+ A CE G Q L +M ++P ++T+ L+
Sbjct: 572 KMLEVIRL---KGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLI 628
Query: 492 ICLSQQ 497
L +Q
Sbjct: 629 KGLCRQ 634
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 224/508 (44%), Gaps = 37/508 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
++ GL A +++ + TD + + + P + +N++ + + +KM+ G
Sbjct: 312 LLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQG 371
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ D TY L+ G C + + KL SRG K N + YN L+ LCK G++ A
Sbjct: 372 LNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEAL 431
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVL-----LEKSFSFGFVPDVV---- 183
+L +ME EP+ + +SILI CKE + A L L++ F F V
Sbjct: 432 TLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGL 491
Query: 184 ----TITKVLELLCSVGRVMDAVE--ILEESGEQG--RLGKVKGGCRFLKEMERKGCLPN 235
I++ + R MD +E +L G RL + + +M +G P+
Sbjct: 492 FKNGNISEARNYFDTWTR-MDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPS 550
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V T+N LI+ +C G L A + +++ G+ + VTY TL+ C G + + L
Sbjct: 551 VVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLH 610
Query: 296 LMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
ME + + P Y ++ GL R+N+ E+L+ L+ M + L P +V + I
Sbjct: 611 EMEANA------VVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQ 664
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
FC + A + ++ M+ P V Y LI+A C +++ ++ +
Sbjct: 665 CFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITL 724
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ T++ C +G V AL + + +G + YS +I LC++G A
Sbjct: 725 KKXTYMTIIKAHCAKGQVSKALGYFNQ---MLAKGFVISIRDYSAVINRLCKRGLITEAK 781
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQ 497
V M+ +G+ PD ++L QQ
Sbjct: 782 YFFVMMLSEGVTPDPEICKTVLNAFHQQ 809
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 180/445 (40%), Gaps = 103/445 (23%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R++ ++ G + + Y +L+ LC R+ + L M++ ++P+ ++Y+ LIH LCK
Sbjct: 399 RQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCK 458
Query: 129 NGKVGRARSLMSDM----EEPND-----------------------------------VT 149
G V RA L M + P+ V
Sbjct: 459 EGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVL 518
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++I+I Y + + + A+ L K G P VVT ++ C G +M+A ++LE
Sbjct: 519 YNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEV-- 576
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+ KG +P+V TY L+++YCE G + ++M+ + +
Sbjct: 577 -----------------IRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLYRENQQDE 326
VTY LI+GLC ++ + L++L+ M +KG + YN+++ + + +
Sbjct: 620 THVTYTVLIKGLCRQNKMHESLQLLEYMY-----AKGLLPDSVTYNTIIQCFCKGKEITK 674
Query: 327 ALEY----------------------------LKQMEKLFPRAVDRSLK---------IL 349
AL+ LK ++++ DR++ I
Sbjct: 675 ALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIK 734
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
C G V A F+QM+ +G V ++ Y +I+ C+ + EA M G P
Sbjct: 735 AHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTP 794
Query: 410 IASTFNTVLSGLCRQGNVGTALKLV 434
TVL+ +QGN + + +
Sbjct: 795 DPEICKTVLNAFHQQGNNSSVFEFL 819
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 186/416 (44%), Gaps = 37/416 (8%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DID 62
+++ PD ++ +I GL + + + + + P ++L L K +I
Sbjct: 439 TLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNIS 498
Query: 63 LARAFY----RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
AR ++ R +M D Y I++ G + + + +L + M RG+ P+ V
Sbjct: 499 EARNYFDTWTRMDLME-----DVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVT 553
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF 174
+NTLI+ C+ G + AR ++ + P+ VT++ L+ AYC+ N+ L +
Sbjct: 554 FNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEME 613
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
+ VP VT T +++ LC ++ +++++LE M KG LP
Sbjct: 614 ANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEY-------------------MYAKGLLP 654
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+ TYN +I +C+ + AL ++N M + VTY LI LC G + D +++
Sbjct: 655 DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMV 714
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAV-DRSLKILGFC 352
+ED K Y +++ + Q +AL Y QM K F ++ D S I C
Sbjct: 715 VSIEDRNITLKK--XTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLC 772
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G + +AK F M+ EG P+ I +++A+ Q+ E + + G++
Sbjct: 773 KRGLITEAKYFFVMMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSGFI 828
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 211/450 (46%), Gaps = 37/450 (8%)
Query: 26 MINDVVKATDLVSR---FN------MTPSLKIFNSILDVLV-KEDIDLARAFYRKKMMAS 75
+IN V++ L S FN P FN++L +V + F+ + +
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK- 158
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
V D Y++ I++KG C + F LL ++ G PN VIY TLI CK G++ +A
Sbjct: 159 -VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ L +M + N+ T+++LI K + EK G P++ T V+
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQ 277
Query: 192 LCSVGRVMDAVEILEESGEQG------RLGKVKGG-CRFLK---------EMERKGCLPN 235
LC GR DA ++ +E E+G + GG CR +K +M+ G PN
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TYN LI +C L AL + D+K G+S + VTY+ L+ G C G K+++
Sbjct: 338 LITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCV 353
ME+ G K Y ++ R + ++A++ ME+L P S+ I GFC+
Sbjct: 398 EMEE--RGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A R F M+E+ PN VIY+ ++ YC+E A L +EM P ++
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDM-RGIG 442
+ ++ LC++ A LVE+ + GIG
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEKMIDSGIG 545
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 199/454 (43%), Gaps = 59/454 (12%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM--SD 141
Y +++ + + + M +G P S +N L+ + + + S
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 142 MEEPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
++ DV +F I+I C+ + + LL + FGF P+VV T +++ C G +
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A ++ E G+ G + G K G ++M+ G PN+ TYN +++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID-----------DGL-- 291
C+ G A VF++M+ G+S N VTY+TLI GLC + + DG+
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINP 336
Query: 292 -------------------KILQLMEDSK-EGSKGRISPYNSVLYGLYRENQQDEALEYL 331
K L L D K G + YN ++ G ++ A + +
Sbjct: 337 NLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVV 396
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
K+ME+ + P V ++ I F N+E A + M E G P+V Y LIH +C +
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIK 456
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R+ EAS L K M + P +NT++ G C++G+ AL+L R + LP +
Sbjct: 457 GRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRL----FREMEEKELPPN 512
Query: 450 -GHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
Y +I+ LC++ + A L+ +M+ GI P
Sbjct: 513 VASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGP 546
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 178/416 (42%), Gaps = 64/416 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
P+ I+ T+I G + ++ KA DL + +F + + + ++ L K I
Sbjct: 196 PNVVIYTTLIDGCCKK---GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQG 252
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+KM GV + +TY +M LC R D FK+ M+ RGV N V YNTLI
Sbjct: 253 FEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGG 312
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC+ K A +M M+ PN +T++ LI +C L AL L S G P
Sbjct: 313 LCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPS 372
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+VT ++ C + G G + +KEME +G P+ TY I
Sbjct: 373 LVTYNILVSGFC-------------------KKGDTSGAGKVVKEMEERGIKPSKVTYTI 413
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI ++ + ++ A+ + + M+ G++ + TY LI G C GR+++ ++ + M + K
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
I YN+++ G +E AL
Sbjct: 474 FEPNEVI--YNTMVLGYCKEGSSYRAL--------------------------------- 498
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
R F +M E+ PNV Y +I C+E + +EA L+++M G P S N +
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 158/344 (45%), Gaps = 27/344 (7%)
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ ++I AY + ++L +++ + GFVP +L + ES
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES- 155
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
K+K + +V ++ I+I CE G ++ + D+ +++ G S
Sbjct: 156 ------KIK-------------VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSP 196
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N V Y TLI G C G I+ + E K G Y +++GL++ + + E
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLF--FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFE 254
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M++ +FP + + C DG +DA + FD+M E G N+V Y+ LI C
Sbjct: 255 MYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLC 314
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+E + EA+E+M +M G P T+NT++ G C +G AL L D++ RG P
Sbjct: 315 REMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLC-RDLK--SRGLSP 371
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ L+ C+KG A ++ +M +GI P +T+ L+
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILI 415
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 209/440 (47%), Gaps = 30/440 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ A V + YTY +++GLC R+ D +L M SR P +Y+ +I S C+
Sbjct: 104 RRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACR 163
Query: 129 NGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G A ++ + +++I A C + + L +L K FG D+V+
Sbjct: 164 SGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVS 223
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
VL+ LC+ R D E+++E + KV L +M + GC P++ Y +I
Sbjct: 224 YNAVLKGLCAAKRWGDVEELMDE------MVKVH---EALSQMAQHGCTPDIRMYATIID 274
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G + A ++ + M G+ N V Y+T+++G+CS R + ++L M
Sbjct: 275 GICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKN--- 331
Query: 305 KGRISPYNSVLYGLY-----RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
P + V + + + D +E L+QM P + + I GFC +G +
Sbjct: 332 ----CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLI 387
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++A M G PN + Y ++ C ER +A ELM M G LP TFNT+
Sbjct: 388 DEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTI 447
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++ LC++G V A++L+++ + G P YS +I L + G + A LL M+
Sbjct: 448 INFLCKKGLVEQAIELLKQMLV---NGCNPDLISYSTVIDGLGKAGKTEEALELLNVMIN 504
Query: 478 KGILPDYLTWNSLLICLSQQ 497
KGI P+ +T++S+ L+++
Sbjct: 505 KGITPNVITYSSMAFALARE 524
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 231/516 (44%), Gaps = 39/516 (7%)
Query: 4 SIQSPPDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
++ PP+ + V+RGL GR R I D + D ++ + P +++ I++ +
Sbjct: 109 AVPVPPNAYTYFPVVRGLCGRGR-IADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGY 167
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ + + A G D +++ +C V +G ++L + G + + V YN +
Sbjct: 168 SSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227
Query: 123 IHSLCKNGKVGRARSLMSDMEE--------------PNDVTFSILICAYCKEENLVNALV 168
+ LC + G LM +M + P+ ++ +I CKE + A
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------- 212
+L + S+G P+VV VL+ +CS R A E+L E ++
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFC 347
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ G V L++M GC+P+V TY +I+ +C+ G++D A+ + +M G N +
Sbjct: 348 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTI 407
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+Y +++GLCS R D +++ M ++G +N+++ L ++ ++A+E LK
Sbjct: 408 SYTIVLKGLCSTERWVDAEELMSRM--IQQGCLPNPVTFNTIINFLCKKGLVEQAIELLK 465
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
QM P + S I G G E+A + MI +G PNV+ Y + A +E
Sbjct: 466 QMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREG 525
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ + ++ + A +N V+S LC++ A+ + + G +P
Sbjct: 526 RIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLA---YMVSNGCMPNES 582
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
Y+ LIK L +G A LL ++ + + +LT
Sbjct: 583 TYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLT 618
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 212/467 (45%), Gaps = 38/467 (8%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+ V G + L++ LC+ R D + L + G V YN ++ C+ G+V
Sbjct: 46 TAVGGGSGRLSALIRSLCVAGRTADAVRALD---AAGNAAGVVDYNAMVAGYCRVGQVEA 102
Query: 135 ARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
AR L + + PN T+ ++ C + +AL +L++ S VP ++E C
Sbjct: 103 ARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESAC 162
Query: 194 SVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVD 237
G A+ +LE +G G V G L+++ GC ++
Sbjct: 163 RSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIV 222
Query: 238 TYNILISSYCET---GVLDSALD-------VFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+YN ++ C G ++ +D + M G + + Y T+I G+C G
Sbjct: 223 SYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHH 282
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ +IL M G K + YN+VL G+ ++ ++A E L +M + D +
Sbjct: 283 EVANEILSRM--PSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFN 340
Query: 348 IL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
IL FC +G V+ +QM+E G +P+V+ Y +I+ +C+E + EA L+K M
Sbjct: 341 ILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSC 400
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P ++ VL GLC A +L+ R I +G LP ++ +I LC+KG
Sbjct: 401 GCKPNTISYTIVLKGLCSTERWVDAEELMS---RMIQQGCLPNPVTFNTIINFLCKKGLV 457
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
+ A LL QM+ G PD +++++++ L + T L LLN M++
Sbjct: 458 EQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMIN 504
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 109/291 (37%), Gaps = 51/291 (17%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ +A V D + G S LIR LC GR D ++ L G+ + Y
Sbjct: 36 ISTAATVSADTAVGGGSGRL---SALIRSLCVAGRTADAVRALD-----AAGNAAGVVDY 87
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
N+++ G R Q EA L + P A + G C G + DA D+M
Sbjct: 88 NAMVAGYCRVGQV-EAARRLAAAVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRS 146
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
VP +Y +I + C+ A +++ + G N V++ +C QG V L
Sbjct: 147 CVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGL 206
Query: 432 KL-------------------------------VEEDMRGIGR-----------GSLPGS 449
++ VEE M + + G P
Sbjct: 207 EMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDI 266
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
Y+ +I +C++G + A+ +L +M G+ P+ + +N++L + W
Sbjct: 267 RMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRW 317
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 216/471 (45%), Gaps = 68/471 (14%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSL 126
++M G + ++Y IL+KGLC NR + +LLH+M + G P+ V Y T+I+
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A S +M + P+ VT++ +I A CK + + A+ +L G +PD
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T +L CS G+ +A+ FLK+M G P+V TY++L
Sbjct: 267 MTYNSILHGYCSSGQPKEAIG-------------------FLKKMRSDGVEPDVVTYSLL 307
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ C+ G A +F+ M G+ TY TL++G + G + + +L LM +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRN 365
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G ++ ++ ++ + D+A+ +M + L P AV I C G VEDA
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIH-----------------------------------A 385
F+QMI+EG P ++Y+ LIH +
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+C+E RV E+ +L + M G P T+NT+++G C G + A+KL+ + G
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG---MVSVGL 542
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
P + YS LI C+ + A +L +M G+ PD +T+N +L L Q
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 223/541 (41%), Gaps = 103/541 (19%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
SPPD + TVI G + + + + P + +NSI+ L K + +D A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M+ +GV D TY ++ G C + + + L M+S GV+P+ V Y+ L+
Sbjct: 252 EVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 126 LCKNGKVGRARSLMSDMEE---------------------------------------PN 146
LCKNG+ AR + M + P+
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
FSILICAY K+ + A+++ K G P+ VT V+ +LC GRV DA+ E
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 207 ESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ ++G K + + EM +G N +N +I S+C+ G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ + +F M G+ N +TY+TLI G C G++D+ +K+L M G K
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM--VSVGLKPNTVT 548
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
Y++++ G + ++ ++AL K+ME
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEME---------------------------------SS 575
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G P+++ Y+ ++ Q R A EL +T G ST+N +L GLC+ A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Query: 431 LKLVEE----DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
L++ + D++ R ++ +I AL + G A L V G++P+Y T
Sbjct: 636 LQMFQNLCLMDLKLEAR-------TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 487 W 487
+
Sbjct: 689 Y 689
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 212/527 (40%), Gaps = 105/527 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I L +A+ ++ ++ + + + + P +NSIL +
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM + GV+ D TY++LM LC R + K+ M RG+KP Y TL+
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + L+ M P+ FSILICAY K+ + A+++ K G P+ VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------------------------------- 212
V+ +LC GRV DA+ E+ ++G
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 213 -------------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ G+V + + M R G PNV TYN LI+ YC G +D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------------- 300
A+ + + M G+ N VTY TLI G C R++D L + + ME S
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 301 --------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------ 334
+ G++ +S YN +L+GL + D+AL+ + +
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ F +D LK+ G ++AK F G VPN Y + + +
Sbjct: 649 LEARTFNIMIDALLKV------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV---GTALKLVEE 436
E +L M +G + N ++ L ++G + GT L +++E
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 186/396 (46%), Gaps = 28/396 (7%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNAL 167
V P+ Y LI C+ G++ + + ++ + + + F+ L+ C ++ +A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 168 -VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
++L + G +P+V + +L+ LC R +A+E+L + +GG
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD------RGG------ 190
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
G P+V +Y +I+ + + G D A +++M GI + VTY+++I LC
Sbjct: 191 ----GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+D +++L M K G YNS+L+G Q EA+ +LK+M + + P V
Sbjct: 247 MDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL + C +G +A++ FD M + G P + Y L+ Y + + E L+ M
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G P F+ ++ +QG V A+ LV MR +G P + Y +I LC+ G
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAM-LVFSKMRQ--QGLNPNAVTYGAVIGILCKSGR 421
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ A + QM+ +G+ P + +NSL+ L W
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 201/496 (40%), Gaps = 100/496 (20%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A V D TY IL+ C R+ GF L + +G + +++ + L+ LC + +
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139
Query: 134 RARSL-MSDMEE----PNDVTFSILICAYCKEENLVNALVLLE---KSFSFGFVPDVVTI 185
A + + M E PN +++IL+ C E AL LL G PDVV+
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T V+ G A E M +G LP+V TYN +I++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHE-------------------MLDRGILPDVVTYNSIIAA 240
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED------ 299
C+ +D A++V N M +G+ + +TY++++ G CS G+ + + L+ M
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 300 ---------------------------SKEGSKGRISPYNSVLYG--------------- 317
+K G K I+ Y ++L G
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 318 --------------------LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
++ + D+A+ +M + L P AV I C G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
VEDA F+QMI+EG P ++Y+ LIH C + A EL+ EM G FN
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ C++G V + KL E +R G P Y+ LI C G A LL M
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVR---IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 476 VGKGILPDYLTWNSLL 491
V G+ P+ +T+++L+
Sbjct: 538 VSVGLKPNTVTYSTLI 553
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL-MKEMTGHGY 407
LGF GNV I++G + + + L+ C ++R +A ++ ++ MT G
Sbjct: 105 LGFAALGNV----------IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P ++N +L GLC + AL+L+ G GS P Y+ +I ++G
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEMV 510
A +M+ +GILPD +T+NS++ L + Q + +LN MV
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ P+ + T+I G + + D + + ++P + +N IL L +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A ++ SG Q + TY I++ GLC D ++ + +K + +N +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 124 HSLCKNGKVGRARSLM----SDMEEPNDVTFSIL 153
+L K G+ A+ L S+ PN T+ ++
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 225/480 (46%), Gaps = 32/480 (6%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ +I+GL + I+D D + + PS+ +N+++D K + A K +M
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSG-RMKDALGIKALM 345
Query: 74 -ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+G DD+TY L+ GLC ++ + +LL+ +RG P + + LI+ CK ++
Sbjct: 346 EQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERI 404
Query: 133 GRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + S+M N D+ + +LI K+ L A L + F+ G P+VVT T +
Sbjct: 405 DDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSI 464
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ C VG V A+E+ K ME +GC PN TY LI +
Sbjct: 465 IDGYCKVGMVGAALEVF-------------------KLMEHEGCHPNAWTYGSLIYGLIQ 505
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L A+ + M+ DGI+ +TY TLI+G C D+ ++ ++ME + G
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME--QNGLTPDE 563
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN + L + + +EA +L + + + SL + GF GN + A ++M+
Sbjct: 564 QAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSL-VDGFSKAGNTDFAAVLIEKMV 622
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
EG ++ Y L+ A C+++++ EA ++ +MT G + ++S + ++G
Sbjct: 623 NEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHD 682
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L E I G P + Y+ I + C+ G + A L+ +M G+ PD +T+N
Sbjct: 683 HAKSLFNE---MISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYN 739
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 144/502 (28%), Positives = 223/502 (44%), Gaps = 35/502 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
+R L R M + K + + + P +N+++ K+ Y + SG
Sbjct: 150 ALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESG 209
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+Q D YT L+ G C T+ + LL +M G + N Y LI LC+ V A
Sbjct: 210 MQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREAL 269
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L+ M N T+++LI CKE + +A LL++ G VP V T +++
Sbjct: 270 VLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGY 329
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C GR+ DA+ G + L ME+ GC P+ TYN LI C G L
Sbjct: 330 CKSGRMKDAL-----------------GIKAL--MEQNGCNPDDWTYNSLIYGLC-GGKL 369
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A ++ N G + +T+ LI G C RIDD L++ M S K + Y
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN--CKLDLQAYG 427
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ L ++ + EA E L +M L P V + I G+C G V A F M E
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHE 487
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PN Y LI+ Q++++ +A L+ +M G P T+ T++ G C++ A
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 547
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L E + G P Y+ L ALC+ G + A LV+ KG++ +T+ SL
Sbjct: 548 FRLFEMMEQN---GLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSL 601
Query: 491 LICLSQQ-TTWLLLLLLNEMVS 511
+ S+ T +L+ +MV+
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVN 623
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/524 (22%), Positives = 224/524 (42%), Gaps = 40/524 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G +A I+D ++ + N L+ + +++VL+K+
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M A+G+ + TY ++ G C VG ++ +M+ G PN+ Y +LI+ L +
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ +A +L++ M+E P +T++ LI CK+ NA L E G PD
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 565
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKGGCRFLKEMERKG 231
+ + LC GR +A L G + G +++M +G
Sbjct: 566 YNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C ++ TY++L+ + C+ L+ AL + + M + G+ N V Y +I + G+ D
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
+ M S G K + Y + + + +EA + +ME+ + P V ++ I
Sbjct: 686 SLFNEMISS--GHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE--------------- 394
G G ++ A +M++ PN Y L+ + + +
Sbjct: 744 GCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELN 803
Query: 395 -ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+L++ M HG P T++++++G C+ + A L++ +G+ P Y+
Sbjct: 804 MVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDH---MLGKDISPNEEIYT 860
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LIK C+ F A + M+ G P +++ L++ L +
Sbjct: 861 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDE 904
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 215/500 (43%), Gaps = 41/500 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I G + M+ ++ L+ P+ + S++ L+ +D L +A
Sbjct: 456 PNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI-QDKKLHKAMA 514
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G+ TY L++G C + + F+L +M+ G+ P+ YN L +LC
Sbjct: 515 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALC 574
Query: 128 KNGKVGRARS-LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+G+ A S L+ VT++ L+ + K N A VL+EK + G D+ T +
Sbjct: 575 KSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+L+ LC ++ +A+ IL++ G + GK EM
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TY + ISSYC+ G ++ A + +M+ DG++ + VTY+ I G G ID
Sbjct: 695 GHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRA 754
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
L+ M D+ P N Y L L++ +M + VD S G
Sbjct: 755 FSTLKRMVDAS------CEP-NCWTYWLL--------LKHFLKMSLINAHYVDTS----G 795
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+ + ++M++ G P VV Y +I +C+ R+ EA L+ M G P
Sbjct: 796 MWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPN 855
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+ ++ C G A+ V DM I G P Y LI LC++G + A
Sbjct: 856 EEIYTMLIKCCCDIKLFGKAVSFV-TDM--IEFGFQPQLESYHYLIVGLCDEGDYDRAKS 912
Query: 471 LLVQMVGKGILPDYLTWNSL 490
L ++G + + W L
Sbjct: 913 LFCDLLGMDYNHNEVAWKIL 932
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 14/258 (5%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN+ + S + + +++ + +G+ + VTY+T+I C G + + L+
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
+S G + N++L G R + +A L M + R + S IL G C
Sbjct: 207 ES--GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARC 264
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V +A M+ +G N+ Y LI C+E R+ +A L+ EM G +P T+N
Sbjct: 265 VREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324
Query: 417 VLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ G C+ G + AL L+E++ G P Y+ LI LC G A LL
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQN------GCNPDDWTYNSLIYGLC-GGKLDEAEELLN 377
Query: 474 QMVGKGILPDYLTWNSLL 491
+ +G P +T+ +L+
Sbjct: 378 GAIARGFTPTVITFTNLI 395
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 101/231 (43%), Gaps = 18/231 (7%)
Query: 272 VTYDTLIRGL--CSGGRIDDGLKILQLMEDSKEGSKGRI-SP--YNSVLYGLYRENQQDE 326
YD L+ + CSG D + + + G K + SP YN L L R +
Sbjct: 103 ANYDKLVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMT-- 160
Query: 327 ALEYLKQM------EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
EY+ ++ E L P V + I+ +C G++ A R F + E G + +
Sbjct: 161 --EYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCN 218
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ YC+ +R+A L+ M G ++ ++ GLC V AL LV
Sbjct: 219 ALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLV---FMM 275
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G Y+ LIK LC++G A LL +M +G++P T+N+++
Sbjct: 276 VHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 242/532 (45%), Gaps = 68/532 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDID-LARA 66
P +++ I +I+ + V++ +++ + ++ +L F+++L L K D+D L R
Sbjct: 129 PADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRD 188
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
Y +M+ SG++ + +T+ ++K LC +V + ++ + G P++ Y +LI
Sbjct: 189 VY-IEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGH 247
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKNG + A + M +PN VT+S LI C E L A+ +LE+ G P V
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T + LC GR +AV++ LGK M+++GC PNV TY L
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKL---------LGK----------MKKRGCGPNVQTYTAL 348
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM--EDS 300
IS G + A+ V++ M DG+ VTY LI L GR + L I + M DS
Sbjct: 349 ISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDS 408
Query: 301 -------------------------------KEGSKGRISPYNSVLYGLYRENQQDEALE 329
K G + YN +++ +++ + A+
Sbjct: 409 LPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMR 468
Query: 330 YLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L+ M+ L + I GF G +E A F++M+E G PNVV Y+ +I+ Y
Sbjct: 469 LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYL 528
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG--IGRGS 445
+V +A L +M G +P + T+N ++SG + + A E+ G + +G
Sbjct: 529 TVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA-----ENFCGKMVKQGL 583
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LP Y+ I LC+ G A + +M + P+ T++SL+ L Q+
Sbjct: 584 LPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 152/578 (26%), Positives = 243/578 (42%), Gaps = 72/578 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I G + ++ + D + + P+ ++++++ L E
Sbjct: 235 PDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDM 294
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M+ G++ + Y I + LC R + KLL MK RG PN Y LI L +
Sbjct: 295 LEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSR 354
Query: 129 NGK----VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK +G +++D P VT+S LI E AL + E S +P+ T
Sbjct: 355 DGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTET 414
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ CS+G + A I ++ + G + G + R L+ M+
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G + TY LIS + G L+ A +FN+M GIS N VTY+ +I G + ++D
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD 534
Query: 289 DGLKILQLMEDS---------------------------------KEGSKGRISPYNSVL 315
D L + M +S K+G + Y S +
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL + + A + +M+K FP S I G C +G EDA+R ++++G
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDGCE 650
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PNV Y L+ C + R EA +L++ M G P + +L G C+ V +ALK+
Sbjct: 651 PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKI 710
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI- 492
+ + G P Y LI ALC+ Q A + M+ K D + W LL
Sbjct: 711 FDS---MVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDG 767
Query: 493 CLSQQTTWLLLLLLNEMVS---------FVMVVHELSA 521
L + T L L LL+ M S VM+ ELSA
Sbjct: 768 LLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSA 805
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 27/337 (8%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P++ T ++++LC+ G+V +A I+ + G P+
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEAELIM-------------------GHIFHYGACPDT 237
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI +C+ G LD A ++F+ M DG N VTY LI GLCS GR+++ + +L+
Sbjct: 238 FTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEE 297
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M D +G + + Y + L + EA++ L +M+K P + I G D
Sbjct: 298 MID--KGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRD 355
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G E A + +M+ +G VP V Y LI+ E R A + + M H LP T+
Sbjct: 356 GKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETY 415
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G C G + A + ++ ++ G P Y+ +I ++G +A LL
Sbjct: 416 NVIIKGFCSIGYIQKATAIFDQMLKA---GPSPNVITYNIIIHIYFKQGYMNNAMRLLEM 472
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTW-LLLLLLNEMV 510
M G G+ D T+ +L+ S+ L NEMV
Sbjct: 473 MKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMV 509
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 228/506 (45%), Gaps = 63/506 (12%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P++ +N+IL+ K+ A + +M + G++ D TY +L+ LC NR G+ L
Sbjct: 8 PTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLL 67
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L M+ R + PN YNTLI+ L K K+G A + ++M PN VT++ILI +C
Sbjct: 68 LKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHCD 127
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE-------SGEQG 212
N AL LL+ + G PD V +L L + + A ++E G +
Sbjct: 128 CGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRA 187
Query: 213 RLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G C+ L M + G P++ T+++LI+ +C+ G + +A +V M
Sbjct: 188 YTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMF 247
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G++ N+V Y TLI C G I + + M ++ G N ++ L R +
Sbjct: 248 KAGLAPNYVIYATLIYNSCKKGDITEAFRNYATM--TRTGHDVDYFICNVLISSLCRAGR 305
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
EA ++++ M L P ++ I G+ + G+ A FD+MI+ G P+ Y
Sbjct: 306 VAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGS 365
Query: 382 LIHAYCQEERVREASELM-----------------------------------KEMTGHG 406
L+ C+ +REA +L+ EM
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFN 425
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGF 465
LP + T+ +L+GL R+G + AL E + + RG+L P Y+ L L + G
Sbjct: 426 VLPDSHTYAIILAGLSRKGKMVPALLFFE---KALARGTLSPNKVMYTSLFDGLFKVGQS 482
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
+AS + +M KGI PD + N++L
Sbjct: 483 NAASYIYEEMEHKGINPDTIAINAVL 508
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 184/426 (43%), Gaps = 30/426 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M SG TY ++ C R L+ M+S+G++ + YN LI LCKN +
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ L+ M + PN+ T++ LI KE + A + + P+ VT
Sbjct: 61 SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ C G A+ R L ME KG P+ Y L+S
Sbjct: 121 LIDGHCDCGNFEQAL-------------------RLLDVMEAKGLRPDEVNYGALLSGLS 161
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ D A + +++ G+ + Y +I GLC G +D+ L++L +M K+G+
Sbjct: 162 KLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMM--FKDGASPD 219
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
I ++ ++ G + + A E + +M K L P V + I C G++ +A R +
Sbjct: 220 IITFSVLINGFCKAGKIKNAKEVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYA 279
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M G + I + LI + C+ RV EA + M+ M+ P + TF+ +++G G
Sbjct: 280 TMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIING---YG 336
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+G ALK I G P Y L+K LC+ G + A LL ++ D
Sbjct: 337 ILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTN 396
Query: 486 TWNSLL 491
+N++L
Sbjct: 397 IYNTIL 402
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 134/550 (24%), Positives = 228/550 (41%), Gaps = 102/550 (18%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD---VLVKEDIDLARA 66
D I +I L RA + + +S ++ P+ F+ I++ +L D +A
Sbjct: 289 DYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILG----DALKA 344
Query: 67 FYR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F +M+ G +TY L+KGLC + + KLL+ + ++ IYNT++
Sbjct: 345 FSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSE 404
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-P 180
CK GK+ A +L +M + P+ T++I++ ++ +V AL+ EK+ + G + P
Sbjct: 405 TCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSP 464
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ V T + + L VG+ A I EE +G R+GK++ +
Sbjct: 465 NKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLF 524
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M+ P++ TYNIL+ Y + L +N M GIS + +T ++I GLC
Sbjct: 525 IKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKS 584
Query: 285 GRID----------------DGLKILQLMEDSKEGSK-GR----------------ISPY 311
G +D D L + L+ +S E K G+ ++ Y
Sbjct: 585 GMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTY 644
Query: 312 NSVLYGLYRENQQDE-----------------------------------ALEYLKQMEK 336
N++ GL R + E A +ME
Sbjct: 645 NAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEA 704
Query: 337 LFPRAVD--RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ + D S + G G VE+A D M+++ +P V + L+H C++ ++ E
Sbjct: 705 IGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSE 764
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A +L +M +G +N ++SGLC G+ A L EE RG P + Y
Sbjct: 765 ALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKE---RGLWPNTTTYCT 821
Query: 455 LIKALCEKGG 464
LI A+ G
Sbjct: 822 LIDAISTNEG 831
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G + A D+M +G +V Y+ LI C+ R + L+K+M P
Sbjct: 21 CKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRKRMIAPNE 80
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T+NT+++GL ++ +G A ++ E + P Y+ LI C+ G F+ A L
Sbjct: 81 FTYNTLINGLMKERKIGGATRVFNEMLM---LNLSPNRVTYNILIDGHCDCGNFEQALRL 137
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQ 496
L M KG+ PD + + +LL LS+
Sbjct: 138 LDVMEAKGLRPDEVNYGALLSGLSK 162
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 206/445 (46%), Gaps = 31/445 (6%)
Query: 45 SLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
S + N +LDV V +++A + +M GV D ++ +++ C RV + K
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMF-VEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKW 246
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L+ M RG ++ +I + C+ G V R M E PN + F+ LI CK
Sbjct: 247 LNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCK 306
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ ++ A LLE+ G+ P+V T T +++ LC G A +
Sbjct: 307 QGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRL--------------- 351
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
FLK + G PNV TY +I+ YC+ L+ A + + M+ G+ N TY TLI
Sbjct: 352 ---FLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLID 408
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
G C G +++ LM KEG I YN+++ GL ++ DEA L ++ L
Sbjct: 409 GHCKVGNFVRAYELMDLM--GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
V ++ + C + + F++M++ G P++ Y LI +C++++++E+
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESER 526
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L +E G +P T+ +++ G CR GN A+KL + R G P S Y LI
Sbjct: 527 LFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ---RMSNHGCAPDSITYGALIS 583
Query: 458 ALCEKGGFQSASMLLVQMVGKGILP 482
LC++ A L M+ KG+ P
Sbjct: 584 GLCKESKLDDARNLYDAMMDKGLSP 608
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 188/426 (44%), Gaps = 50/426 (11%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y KM+ G+ + + L+ GLC + F+LL M RG KPN + TLI LC
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 128 KNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A L SD +PN T++ +I YCKE+ L A +LL + G VP+
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T +++ C VG + A E+++ G++G PN+ TYN +
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFS-------------------PNIYTYNAI 441
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C+ G LD A + N + + G+ + VTY L+ C + L M K
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM--LKV 499
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL---------KILGFCV 353
G I Y +++ R+ Q +K+ E+LF AV L I G+C
Sbjct: 500 GFTPDIHSYTTLISXFCRQKQ-------MKESERLFEEAVSLGLIPTKKTYTSMICGYCR 552
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
GN A + F +M G P+ + Y LI C+E ++ +A L M G P T
Sbjct: 553 YGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVT 612
Query: 414 FNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+ C++ + TA+ +++ + R R + L++ LC +G A++
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQWIRT-------VNTLVRKLCSEGKLDMAALFF 665
Query: 473 VQMVGK 478
+++ K
Sbjct: 666 HKLLDK 671
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 150/325 (46%), Gaps = 29/325 (8%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD V+ ++ C++GRV++A ++L M +G + +
Sbjct: 219 GVSPDCVSFKLMVVACCNMGRVLEAE-------------------KWLNAMVERGFIVDN 259
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
T ++I ++C+ G ++ + F M G++ N + + LI GLC G I ++L+
Sbjct: 260 ATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLE- 318
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLK--QMEKLFPRAVDRSLKILGFCV 353
E + G K + + +++ GL ++ ++A +LK + + P + I G+C
Sbjct: 319 -EMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCK 377
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+ + A+ +M E+G VPN Y LI +C+ A ELM M G+ P T
Sbjct: 378 EDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG-HYSPLIKALCEKGGFQSASMLL 472
+N ++ GLC++G++ A +L+ + + L G Y+ L+ C + + +
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNK----VSVHGLQADGVTYTILMSVHCRQADTNRSLVFF 493
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQ 497
+M+ G PD ++ +L+ +Q
Sbjct: 494 NKMLKVGFTPDIHSYTTLISXFCRQ 518
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
GK+K + EM+ +G + + T N ++ G+++ A ++F +M G+S + V++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
++ C+ GR+ + K L M V G +N
Sbjct: 228 KLMVVACCNMGRVLEAEKWLNAM----------------VERGFIVDN------------ 259
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+L I FC G V F +M+E G PNV+ + LI+ C++ +++
Sbjct: 260 -------ATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQ 312
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A EL++EM G+ P T T++ GLC++G A +L + +R G P Y+
Sbjct: 313 AFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYK--PNVHTYTA 370
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+I C++ A MLL +M +G++P+ T+ +L+
Sbjct: 371 MINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLI 407
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 40/327 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + + T+I G + + DL+ + +P++ +N+I+D L K+ +D A
Sbjct: 398 PNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA--- 454
Query: 68 YR--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
YR K+ G+Q D TY ILM C + M G P+ Y TLI
Sbjct: 455 YRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISX 514
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ ++ + L + P T++ +IC YC+ N A+ L ++ + G PD
Sbjct: 515 FCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPD 574
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+T ++ LC ++ DA + + M KG P T
Sbjct: 575 SITYGALISGLCKESKLDDARNLYD-------------------AMMDKGLSPCEVTRLT 615
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L YC+ +A++V + +++ W T +TL+R LCS G++D + D K
Sbjct: 616 LAYEYCKKDDSSTAINVLD--RLEKRQW-IRTVNTLVRKLCSEGKLDMAALFFHKLLD-K 671
Query: 302 EGSKGRIS-------PYNSVLYGLYRE 321
E + R++ Y S YGL E
Sbjct: 672 EPNVNRVTLLGFMNKCYESNKYGLVSE 698
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 230/501 (45%), Gaps = 43/501 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + TV+ GL R + + D V ++ PS+ FNSI+ K +D+A++F+
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ Y++ IL+ GLCL + + +L M GV+P+SV YN L+
Sbjct: 265 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHL 323
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVV 183
G + A ++ DM + P+ +T++IL+C C+ N+ L+LL+ S GF + ++
Sbjct: 324 LGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSII 383
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC GRV +A+ + ++E G P++ Y+I+I
Sbjct: 384 PYSVMLSGLCKTGRVDEALSLF-------------------YDLEAYGLTPDLVAYSIVI 424
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G D A+ V+++M I N T ++ GLC G + + +L + S G
Sbjct: 425 HGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISS--G 482
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
I YN V+ G + +EALE K + P + I G+C N+ +A+
Sbjct: 483 DTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEAR 542
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D + G VP+VV Y L+ AY ++ EL +EM G P T++ + GL
Sbjct: 543 KILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGL 602
Query: 422 CRQGNVGTALKLVEE-----------DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
CR + +++ E DM G P Y+ +I+ LC A
Sbjct: 603 CRGWKLENCNQVLRERILEKFNHVLRDME--SEGITPDQITYNTIIQYLCRVKHLSRAFE 660
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
L +M + + P T+N L+
Sbjct: 661 LFKKMKSQNLDPTSATYNILI 681
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 220/491 (44%), Gaps = 66/491 (13%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQG 79
R RM+++ + + N+ S + +NS+L + D D+ + K
Sbjct: 154 SRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDK--------- 204
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+++TY+ ++ GLC ++ D L + + + P+ V +N+++ S CK G V A+S
Sbjct: 205 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFF 264
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
++L C G VP V + ++ LC VG +
Sbjct: 265 C----------TVLKC---------------------GLVPSVYSHNILINGLCLVGSIA 293
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A+E+ + + G LG + G +++M KG P+V TY IL+
Sbjct: 294 EALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILL 353
Query: 244 SSYCETGVLDSALDVFNDMKIDGISW-NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ G +D L + DM G + + Y ++ GLC GR+D+ L + +E
Sbjct: 354 CGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLE--AY 411
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + Y+ V++GL + + D A+ +M +++ P + +LG C G + +A
Sbjct: 412 GLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEA 471
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ D +I G ++++Y+ +I Y + + EA EL K G P +TFN+++ G
Sbjct: 472 RSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYG 531
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C+ N+ A K++ D+ + G +P Y+ L+ A G +S L +M +GI
Sbjct: 532 YCKTQNIAEARKIL--DVIKL-YGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGI 588
Query: 481 LPDYLTWNSLL 491
P +T++ +
Sbjct: 589 PPTNVTYSVIF 599
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 162/405 (40%), Gaps = 46/405 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + VI GL + + V+ D + + P+ + +I+ L ++ + L
Sbjct: 415 PDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSL 474
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++SG D Y I++ G + + + +L V G+ PN +N+LI+ CK
Sbjct: 475 LDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCK 534
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ AR ++ ++ P+ V+++ L+ AY ++ + L + + G P VT
Sbjct: 535 TQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVT 594
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ + + LC ++ + ++L E ++ L++ME +G P+ TYN +I
Sbjct: 595 YSVIFKGLCRGWKLENCNQVLRER-------ILEKFNHVLRDMESEGITPDQITYNTIIQ 647
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C L A ++F MK + TY+ LI LC G I
Sbjct: 648 YLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKA-------------- 693
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ LY L + N Y + I CV G+ E A F
Sbjct: 694 -------DRFLYSLQKRNVSLSKFAY--------------TTVIKAHCVKGDPEMAVILF 732
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+Q+++ G ++ Y +I+ C+ E+ M G P
Sbjct: 733 NQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISP 777
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 197/389 (50%), Gaps = 25/389 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M SG++ + Y+ L++G C + R D K+ M +G++P+ V+Y LI SLCK G
Sbjct: 175 EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVG 234
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K +A +M M EPN VT+++LI CKE ++ A+ +L+K G PDVVT
Sbjct: 235 KAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYN 294
Query: 187 KVLELLCSVGRVMDAVEILEE----------------SGEQG--RLGKVKGGCRFLKEME 228
+++ L V + +A+ +LEE S QG +G+++ + ME
Sbjct: 295 TLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC+ N+ TYN+LI + A+++ ++M G+ + TY LI+G C ++D
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP-RAVDRSLK 347
+L M D G + + Y +L + + + A +M+ FP V S
Sbjct: 415 RAEDLLSTMRD--RGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTM 472
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C G+++ AK +++EG P+ V Y +I+ + + + A+ ++K+MT G+
Sbjct: 473 IHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGF 532
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
LP + F++++ G +G + L+L+ E
Sbjct: 533 LPDVAVFDSLIQGYSTKGEINKVLELIRE 561
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 226/506 (44%), Gaps = 71/506 (14%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS--GVQGDDYTYAILM 88
+AT L+ +N++L L + D A A R + + + +Y +LM
Sbjct: 63 EATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLM 122
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EE 144
+ LC LL M+S GV+ + V Y TLI LC +V +A LM +M E
Sbjct: 123 RALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIE 182
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN V +S L+ YCK + + + G PDVV T +++ LC VG+ A +
Sbjct: 183 PNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGV 242
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
++ M R+G PNV TYN+LI+ C+ G + A+ V M
Sbjct: 243 MDM-------------------MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSE 283
Query: 265 DGISWNFVTYDTLIR-------------------------------------GLCSGGRI 287
G++ + VTY+TLI+ GLC GR+
Sbjct: 284 KGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRM 343
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++ +ME++ G + YN ++ GL R ++ +A+E + +M L P + S
Sbjct: 344 RQAFQVRAMMEET--GCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I GFC V+ A+ M + G P + Y L+ A C++ + A L EM +
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNN 461
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
L + + ++T++ G C+ G++ TA +L++ + G P + YS +I + G
Sbjct: 462 FPLDVVA-YSTMIHGACKAGDLKTAKELLKSI---VDEGLTPDAVTYSIVINMFAKSGDM 517
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
++A+ +L QM G LPD ++SL+
Sbjct: 518 EAANGVLKQMTASGFLPDVAVFDSLI 543
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 205/448 (45%), Gaps = 32/448 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAF 67
D + T+IRGL A ++ V+ + + P++ +++S+L K D+ + F
Sbjct: 149 DVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVF 208
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M G++ D Y L+ LC + ++ +M RG++PN V YN LI+ +C
Sbjct: 209 V--EMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMC 266
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV--PD 181
K G V A ++ M E P+ VT++ LI + A+ LLE+ + P+
Sbjct: 267 KEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPN 326
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
VVT V++ LC +GR+ A ++ E G R+ KV+ +
Sbjct: 327 VVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMD 386
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM G P+ TY+ILI +C+ +D A D+ + M+ GI Y L+ +C G
Sbjct: 387 EMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQG 446
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
++ + M+++ + Y+++++G + A E LK + E L P AV
Sbjct: 447 MMERARNLFNEMDNNFPLD---VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVT 503
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S+ I F G++E A QM G +P+V ++D LI Y + + + EL++EM
Sbjct: 504 YSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+ + S + LS N G AL
Sbjct: 564 TKN-IALDSKIISTLSTSLVASNEGKAL 590
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 190/412 (46%), Gaps = 38/412 (9%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-------EPNDVT 149
+G+ LL + S ++V YNT++ +LC+ G RA +L+ M PN V+
Sbjct: 61 LGEATSLLDALPS---VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+++L+ A C + A+ LL S G DVVT ++ LC V AVE++
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM---- 173
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
EM G PNV Y+ L+ YC++G + VF +M GI
Sbjct: 174 ---------------GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEP 218
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ V Y LI LC G+ ++ +M + G + + YN ++ + +E EA+
Sbjct: 219 DVVMYTGLIDSLCKVGKAKKAHGVMDMM--VRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYDCLIHA 385
LK+M + + P V + I G +++A ++M+ + PNVV ++ +I
Sbjct: 277 VLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQG 336
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C R+R+A ++ M G + T+N ++ GL R V A++L++E M +G
Sbjct: 337 LCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDE-MTSLGLE- 394
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P S YS LIK C+ A LL M +GI P+ + LL+ + +Q
Sbjct: 395 -PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQ 445
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLME-DSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
V+Y+T++ LC G D +L+ M + + Y ++ L + D+A+
Sbjct: 78 VSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGL 137
Query: 331 LKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L+ M RA V I G C V+ A +M E G PNVV+Y L+ YC+
Sbjct: 138 LRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCK 197
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
R + ++ EM+ G P + ++ LC+ G A +++ +R RG P
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR---RGLEPN 254
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS-----QQTTWLL 502
Y+ LI +C++G + A +L +M KG+ PD +T+N+L+ LS + WLL
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 220/459 (47%), Gaps = 28/459 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D TY I++ G C + + KLL M +RG++ N V Y ++I LC G+V A ++
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343
Query: 140 SDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
DM + F+ ++ +C++ +L A ++ G D VT T ++ LC
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403
Query: 196 GRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTY 239
G + +A +L+E ++G ++GK+ +M +K PNV TY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L C+ G + +A ++ ++M G+ N TY++LI GLC G ++ ++ + M++
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ G K + Y +++ L + + D A L++M + + P V ++ + GFC+ G V
Sbjct: 524 A--GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E KR + M+E+ PN Y+ L+ YC E+ ++ +E+ K M +P +T+N +
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G C+ N+ AL E I +G + Y+ LI+ L +K F A L +M
Sbjct: 642 IKGHCKARNMKEALYFHSE---MIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 478 KGILPDYLTWNSLL-ICLSQQTTWLLLLLLNEMVSFVMV 515
+ + +N + + ++ L L +E+V +V
Sbjct: 699 DRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 184/385 (47%), Gaps = 62/385 (16%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV-TFSILICAYCKEENLVNALVLLEKS 173
N+ YN L+ +LC G++ A L +M P DV T+ I++ YC L A+ LL +
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ G + V T V+ LLC G+V DAV ++E +M G +
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVE-------------------DMVMHGVV 352
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
+ + ++S +C G L +A + F++M+ G++ + VTY LI GLC G + + ++
Sbjct: 353 LDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV 412
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV 353
LQ MED KG L AV ++ I G+C
Sbjct: 413 LQEMED-----KG------------------------------LDVDAVTYTVLIDGYCK 437
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A ++M+++ PNVV Y L C++ V A+EL+ EM G T
Sbjct: 438 VGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFT 497
Query: 414 FNTVLSGLCRQGNVGTALK-LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+N++++GLC+ GN+ A++ +++ D G+ P Y+ +I ALC+ A LL
Sbjct: 498 YNSLINGLCKAGNLEQAMRTMIDMDEAGLK----PDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 473 VQMVGKGILPDYLTWNSLL--ICLS 495
+M+ KGI P +T+N L+ C+S
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMS 578
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 60/428 (14%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ +VI L ++D V+ + + + +F +++ ++ D+ AR ++ +M
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF-DEM 381
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D TY L+ GLC + + ++L M+ +G+ ++V Y LI CK GK+
Sbjct: 382 QKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKM 441
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + + M + PN VT++ L CK+ ++ A LL + S G ++ T +
Sbjct: 442 TEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSL 501
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC G + A+ R + +M+ G P+V TY +I + C+
Sbjct: 502 INGLCKAGNLEQAM-------------------RTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ LD A + +M GI VTY+ L+ G C GR++ G ++L+ M + +
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLE--KNIHPNT 600
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+ YNS+ +KQ +C++ N++ + M+
Sbjct: 601 TTYNSL----------------MKQ-----------------YCIEKNMKSTTEIYKGML 627
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ VPN Y+ LI +C+ ++EA EM G+ AS++N ++ L ++
Sbjct: 628 SQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFT 687
Query: 429 TALKLVEE 436
A +L E+
Sbjct: 688 EARRLFEK 695
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 137/327 (41%), Gaps = 52/327 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I G + + + + + + +TP++ + ++ D L K+ A
Sbjct: 424 DAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELL 483
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M + G++ + +TY L+ GLC + + + M G+KP+ Y T+I +LC++
Sbjct: 484 HEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS 543
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
++ RA SL+ +M L+K G P +VT ++
Sbjct: 544 KELDRAHSLLQEM---------------------------LDK----GIKPTIVTYNVLM 572
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
C GRV +GG R L+ M K PN TYN L+ YC
Sbjct: 573 NGFCMSGRV-------------------EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ S +++ M + N TY+ LI+G C + + L M ++G + S
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM--IEKGFRLTAS 671
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK 336
YN+++ L ++ + EA ++M K
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRK 698
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 45/240 (18%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+ +F ++ N +Y+ L++ LC+ GRI D ++ M SP
Sbjct: 238 LDEAVQLFQELP----EKNTCSYNILLKALCTAGRIKDAHQLFDEM----------ASPP 283
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ V YG+ + G+C +E A + +M G
Sbjct: 284 DVVTYGIM----------------------------VHGYCTLSELETAIKLLSEMAARG 315
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
N V Y +I C E +V +A ++++M HG + A+ F TV+SG CR+G++ A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+E + RG Y+ LI LC G + A +L +M KG+ D +T+ L+
Sbjct: 376 NWFDEMQK---RGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLI 432
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 199/402 (49%), Gaps = 27/402 (6%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++ K++A G Q D +Y L+ GLC +LL + + V+PN V+Y+T+I S+
Sbjct: 149 YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSM 208
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+ V A L +M P+ VT+S LI +C L A+ L + S P+V
Sbjct: 209 CKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNV 268
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
T + +++ C G+V +A +L ++ + +V
Sbjct: 269 YTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV 328
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M ++G P+V +Y+I+I+ +C+ ++D A+ +F +M I N VTY++L+ GLC GR
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
L+++ M D G I YNS+L + + N D+A+ L ++++ + P
Sbjct: 389 TSCALELVDEMHD--RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTY 446
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ I G C G ++DA++ F+ ++ +G PN+ Y LI+ +C + E ++ +M
Sbjct: 447 TVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKD 506
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+G +P A T+ ++ L + A KL+ E I RG L
Sbjct: 507 NGCIPNAITYEILIHSLFEKDENDKAEKLLRE---MIARGLL 545
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 207/433 (47%), Gaps = 30/433 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G D T+ IL+KGLCL V + ++G + + V Y TLI+ LC+ G
Sbjct: 118 KILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVG 177
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A L+ ++ PN V +S +I + CK++ + +A L + S PDVVT +
Sbjct: 178 ETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYS 237
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C VG++ AV++ M PNV T++ILI +
Sbjct: 238 SLISGFCVVGKLKYAVDLFNR-------------------MISDNINPNVYTFSILIDGF 278
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + A +V M + + VTY++L+ G C +++ + +M ++ G
Sbjct: 279 CKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVM--AQRGVTP 336
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ Y+ ++ G + DEA++ ++M +++FP V + + G C G A
Sbjct: 337 DVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELV 396
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M + G N++ Y+ ++ A C+ V +A L+ ++ G P T+ +++GLC+
Sbjct: 397 DEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKV 456
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A K+ E+ + +G P Y+ LI C KG F +L +M G +P+
Sbjct: 457 GRLDDAQKVFEDLLV---KGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNA 513
Query: 485 LTWNSLLICLSQQ 497
+T+ L+ L ++
Sbjct: 514 ITYEILIHSLFEK 526
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 211/462 (45%), Gaps = 30/462 (6%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
L+ + N P F IL L+K ++M +G++ D T +LM
Sbjct: 48 LLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLG 107
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFS 151
+ F + + +G P++V + LI LC G+V +A +++ + + V++
Sbjct: 108 HIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYG 167
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI C+ A+ LL + P+VV + +++ +C V DA ++
Sbjct: 168 TLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLY------ 221
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
C EM K P+V TY+ LIS +C G L A+D+FN M D I+ N
Sbjct: 222 ---------C----EMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNV 268
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL--YGLYRENQQDEALE 329
T+ LI G C G++ + +L +M K+ K + YNS++ Y L ++ + ++L
Sbjct: 269 YTFSILIDGFCKEGKVREAKNVLAVM--MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326
Query: 330 YLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ + P S+ I GFC V++A + F++M + PNVV Y+ L+ C+
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKS 386
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R A EL+ EM G T+N++L +C+ +V A+ L+ + +G P
Sbjct: 387 GRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKE---KGIQPDI 443
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI LC+ G A + ++ KG P+ T+ SL+
Sbjct: 444 FTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 186/352 (52%), Gaps = 34/352 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
P+ ++ T+I + + +++ND ++VS+ ++P + ++S++ +K +D
Sbjct: 196 PNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK-RISPDVVTYSSLISGFCVVGKLKYAVD 254
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L +M++ + + YT++IL+ G C +V + +L VM + VK + V YN+L
Sbjct: 255 LFN-----RMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSL 309
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ C +V +A+SL + M + P+ ++SI+I +CK + + A+ L E+
Sbjct: 310 MDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR--------- 222
P+VVT +++ LC GR A+E+++E ++G+ + C+
Sbjct: 370 FPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L +++ KG P++ TY +LI+ C+ G LD A VF D+ + G S N TY +LI G C
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFC 489
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ G D+GL +L M+D+ G Y +++ L+ +++ D+A + L++M
Sbjct: 490 NKGFFDEGLAMLSKMKDN--GCIPNAITYEILIHSLFEKDENDKAEKLLREM 539
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 7/166 (4%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-I 61
H Q P+ + +++ GL ++ + ++ D + ++ +NSILD + K + +
Sbjct: 365 HCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHV 424
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A K+ G+Q D +TY +L+ GLC R+ D K+ + +G PN Y +
Sbjct: 425 DKAIVLLT-KIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTS 483
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA-YCKEEN 162
LI+ C G +++S M++ PN +T+ ILI + + K+EN
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDEN 529
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 213/470 (45%), Gaps = 28/470 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + + +IRG M + + + PS FN ++ L+ + +
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M SG+ D +TY IL+ LC ++ + L M GVKP V Y++L+ C
Sbjct: 375 FKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + A L ++M PN VT++ L+ + + A LL + G + T
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL-----------GKVKGGC-----RFLKEME 228
++ LC VGRV + E+L+ +G + G +K G ++M
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG PN+ TY I YC+T D AL + ND++ G+ + Y++LI G C G +
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMS 613
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
L++L LM K+G IS YNS + G +EAL + ++M E + +
Sbjct: 614 HALQVLVLM--LKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTT 671
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I GF DGNV A + + +M+ +G +P+ + + L H C+ + +A +L+ EM
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLD 731
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
P +N +++G R G + A +L +E + R +P Y L+
Sbjct: 732 IRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLE---RKIMPDDTTYDILV 778
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 224/516 (43%), Gaps = 37/516 (7%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP S + PD+ + I L + R N + + P FNS++DVLVK
Sbjct: 203 MPAS-EIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGG 261
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ +++A+G + LM G CL V + G+ P V Y
Sbjct: 262 RMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYT 321
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI + G +A L M + P+ F+++I ++ +A+ L ++
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADS 381
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-----------RLGKVKGGC---- 221
G +PD T ++ LC ++ +A+ + E+ E G L GC
Sbjct: 382 G-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEA 440
Query: 222 -RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ EM KG PNV TY L+ + D A + +MK +G+S N TY+TLI G
Sbjct: 441 VKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLING 500
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
LC GR+ + ++L+ E EG YNS++ G + A +QM + +
Sbjct: 501 LCVVGRVCEVGEMLKRFE--TEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIP 558
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + I G+C + A + + + +G P++ Y+ LI+ +CQE + A ++
Sbjct: 559 PNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQV 618
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG----IGRGSLPGSGHYSP 454
+ M G LP S +N+ ++G LK++EE +R I G + Y+
Sbjct: 619 LVLMLKDGLLPNISVYNSFITGY-------KNLKMMEEALRFYEKMIKEGIDLDTATYTT 671
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
LI + G A L +MV KG +PD++T+ +L
Sbjct: 672 LIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTAL 707
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 204/468 (43%), Gaps = 32/468 (6%)
Query: 48 IFNSILDVLVKEDI--DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH 105
+F+ ++ KE + D R F +M AS ++ D ++ + LC +L
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLF--DEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLR 236
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEE 161
M+ G P +N+++ L K G++ A L++ ++ + V + L+ YC +
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQR 296
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV---- 217
+ AL + E++ G VP VT T ++ G A E+ + + G L
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356
Query: 218 ------------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
K KEM G +P+ TYNILI C+ + AL+++ M
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNET 415
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G+ VTY +L+ C G +D+ +K+ M +G + Y +++ G + D
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM--PGKGFTPNVVTYTTLMKGHINKAAFD 473
Query: 326 EALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+A L +M++ D + L G CV G V + + EG VP + Y+ +I
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ + + + A + ++M G P T+ + + G C+ ALK++ D+R +
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLN-DVRC--K 590
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ LI C++G A +LV M+ G+LP+ +NS +
Sbjct: 591 GLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 125/552 (22%), Positives = 230/552 (41%), Gaps = 35/552 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+TP K +L V + +M G D + + ++M+ D
Sbjct: 138 VTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYDDAV 197
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L M + ++P+ + + I SLCK RA ++ M++ P D TF+ ++
Sbjct: 198 RLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVL 257
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--- 214
K + AL + ++ + G VV T ++ C V A++I EE+ G +
Sbjct: 258 VKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTD 317
Query: 215 -------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
G + ++M G LP+ + +N++I + A+ +F +
Sbjct: 318 VTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE 377
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M GI F TY+ LI LC +I + L + + M ++ G K I Y+S+L
Sbjct: 378 MADSGIPDAF-TYNILIHWLCQRRKIREALNLWEKMNET--GVKPYIVTYHSLLLCYCVN 434
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
DEA++ +M + P V + + G + A +M + G N Y
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ LI+ C RV E E++K G++P A T+N++++G + G +G+A + ++
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQ--- 551
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
+G P Y+ I C+ A +L + KG+ PD +NSL+ Q+
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGN 611
Query: 500 W------LLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHT 553
L+L+L + ++ + V + K K+ L + G+ + T+T
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME-EALRFYEKMIKEGIDLDTATYT 670
Query: 554 FIIDRRVEIGHV 565
+ID + G+V
Sbjct: 671 TLIDGFSKDGNV 682
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 243/500 (48%), Gaps = 55/500 (11%)
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMK---SRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
D+ L+K L + + G+ + L+ ++ ++G KP+ V+ LIH L + + +A
Sbjct: 54 DFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQ 113
Query: 138 LMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+M +E P+ + ++ +I +C+ + +A +L++ + GF PD+VT ++ LCS
Sbjct: 114 VMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCS 173
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G + A+E F ++ ++ C P V TY ILI + G +D
Sbjct: 174 RGMLDSALE-------------------FKNQLLKENCKPTVVTYTILIEATLLQGGIDE 214
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+ + ++M + + TY+++IRG+C G +D +I+ + S +G + YN +
Sbjct: 215 AMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSI--SSKGYAPDVITYNIL 272
Query: 315 LYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
L GL + + + E + M A V S+ I C DG VE+ M ++G
Sbjct: 273 LRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGL 332
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P+ YD LI A C+E RV A E++ M G +P +NT+L+ LC+Q AL
Sbjct: 333 KPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALS 392
Query: 433 LVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ E+ +G G P + Y+ + AL G A ++++M+ KG+ PD +T+NSL+
Sbjct: 393 IFEK----LGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLI 448
Query: 492 ICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG-------------- 537
CL + +++E + ++V E+ + E + + S N + G
Sbjct: 449 SCLCRDG------MVDEAIE-LLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVL 501
Query: 538 AGSVWLGLRIHDTTHTFIID 557
A V G R ++TT+TF+I+
Sbjct: 502 AAMVDKGCRPNETTYTFLIE 521
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 201/429 (46%), Gaps = 29/429 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA---- 135
D Y ++ G C NR+ +++L MK++G P+ V YN LI SLC G + A
Sbjct: 125 DLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFK 184
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
L+ + +P VT++ILI A + + A+ LL++ PD+ T ++ +C
Sbjct: 185 NQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCRE 244
Query: 196 GRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTY 239
G V A +I+ +G GK + G + +M +GC NV TY
Sbjct: 245 GYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTY 304
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
++LISS C G ++ + + DMK G+ + YD LI LC GR+D +++L +M
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM-- 362
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNV 357
+G I YN++L L ++ + DEAL +++ ++ P A + G+
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM--KEMTGHGYLPIASTFN 415
A +M+++G P+ + Y+ LI C++ V EA EL+ EM P ++N
Sbjct: 423 VRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYN 482
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
VL GLC+ V A++++ + +G P Y+ LI+ + G A L +
Sbjct: 483 IVLLGLCKVSRVSDAIEVLAA---MVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539
Query: 476 VGKGILPDY 484
V + ++
Sbjct: 540 VNMDAISEH 548
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 193/421 (45%), Gaps = 29/421 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G RA I+ + D + +P + +N ++ L + + +
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +++ + TY IL++ L + + KLL M ++P+ YN++I +C+
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V RA ++S + P+ +T++IL+ + L+ + G +VVT
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ +C R GKV+ G LK+M++KG P+ Y+ LI+
Sbjct: 304 YSVLISSVC-------------------RDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIA 344
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ G +D A++V + M DG + V Y+T++ LC R D+ L I + + + G
Sbjct: 345 ALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKL--GEVGC 402
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
S YNS+ L+ + AL + +M + + P + + I C DG V++A
Sbjct: 403 SPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIE 462
Query: 363 CFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M E P+VV Y+ ++ C+ RV +A E++ M G P +T+ ++ G
Sbjct: 463 LLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEG 522
Query: 421 L 421
+
Sbjct: 523 I 523
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 27/320 (8%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
I PD + ++IRG+ R ++ + +S P + +N +L L+ + A
Sbjct: 225 INLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEA 284
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
M+A G + + TY++L+ +C +V +G LL MK +G+KP+ Y+ LI
Sbjct: 285 GYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIA 344
Query: 125 SLCKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+LCK G+V A ++SD P+ V ++ ++ CK++ AL + EK G P
Sbjct: 345 ALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSP 404
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ + + L S G + A+ + + EM KG P+ TYN
Sbjct: 405 NASSYNSMFSALWSTGHKVRALGM-------------------ILEMLDKGVDPDGITYN 445
Query: 241 ILISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
LIS C G++D A+++ DM+++ + V+Y+ ++ GLC R+ D +++L M
Sbjct: 446 SLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMV 505
Query: 299 DSKEGSKGRISPYNSVLYGL 318
D +G + + Y ++ G+
Sbjct: 506 D--KGCRPNETTYTFLIEGI 523
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 44 PSLKIFNSIL-----DVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
P +NS++ D +V E I+L +M +S + +Y I++ GLC +RV
Sbjct: 439 PDGITYNSLISCLCRDGMVDEAIEL---LVDMEMESSECKPSVVSYNIVLLGLCKVSRVS 495
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS---DMEEPNDVTFSILIC 155
D ++L M +G +PN Y LI + G + AR L + +M+ ++ +F L
Sbjct: 496 DAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISEHSFERLYK 555
Query: 156 AYCK 159
+CK
Sbjct: 556 TFCK 559
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/491 (28%), Positives = 219/491 (44%), Gaps = 37/491 (7%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
S PPD ++ ++R L R +D A +V ++ + ++ D +
Sbjct: 95 ESSPRPPDAALANRLVRDLCRRGRPDD---AERVVGACGPAATVVAYGALTDGYCRAG-R 150
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L A R+ + VQ + YTY L+ LC +V D +L M RG P+ V YN L
Sbjct: 151 LGDA--RRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNIL 208
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ + CK +A L+ M PN+VT+++L+ C E ++ +AL LL S G
Sbjct: 209 LEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGC 268
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P V VL+ LCS R DA E+ + EM R+ C PN T
Sbjct: 269 KPSTVNYNTVLKGLCSAERWGDADEL-------------------VTEMLRENCPPNEAT 309
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
+N++I S C G+L A+ + M G + N VTY+ +I GLC +D + +L M+
Sbjct: 310 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK 369
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
G K I YN++L GL Q +A E + M + P V + I C G
Sbjct: 370 --SYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 427
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ DA F QM ++G PN + Y +I + ++ +A EL EM G+ P +
Sbjct: 428 MVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP-DKIYQL 486
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ L + A++ V + G P + Y+ ++ LC G + A ++ MV
Sbjct: 487 LAECLNDDDTIEEAIQTVRKLQDS---GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMV 543
Query: 477 GKGILPDYLTW 487
G +PD LT+
Sbjct: 544 SSGCMPDDLTY 554
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 209/441 (47%), Gaps = 46/441 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--------ED 60
P+ + +I L + D + D + P + +N +L+ K E
Sbjct: 165 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 224
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDL RA G ++ TY +LM G+C V D +LL + S G KP++V YN
Sbjct: 225 IDLMRA--------EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 276
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T++ LC + G A L+++M PN+ TF+++I + C++ L A+ LLEK
Sbjct: 277 TVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 336
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G ++VT ++ LC E+ G +G L +M+ GC P++
Sbjct: 337 GCTANIVTYNAIINGLC------------EQRNVDGAMG-------LLSKMKSYGCKPDI 377
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN L+ C A ++ ++M +G + VT++TLI LC G + D +++ +
Sbjct: 378 VTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 437
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCV-- 353
M D +G Y++++ GL + + D+ALE +M K F D+ ++L C+
Sbjct: 438 MPD--KGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF--NPDKIYQLLAECLND 493
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D +E+A + ++ + G P+ V+Y+ ++ C+ + A ++M M G +P T
Sbjct: 494 DDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLT 553
Query: 414 FNTVLSGLCRQGNVGTALKLV 434
+ ++ GL +G + A +L+
Sbjct: 554 YVILIEGLAYEGYLNEARELL 574
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 200/416 (48%), Gaps = 31/416 (7%)
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-EEPNDVTFSILICA 156
GD L +++S P++ + N L+ LC+ G+ A ++ V + L
Sbjct: 85 GDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAATVVAYGALTDG 144
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
YC+ L +A ++ P+ T ++ LC G+V DA+ +L++
Sbjct: 145 YCRAGRLGDARRVVG---GMPVQPNAYTYNPLIHTLCERGQVRDALSVLDD--------- 192
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M +GC P+V TYNIL+ + C+ A+++ + M+ +G + N VTY+
Sbjct: 193 ----------MLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNV 242
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
L+ G+C G +DD L++L+ + G K YN+VL GL + +A E + +M
Sbjct: 243 LMDGMCGEGDVDDALELLRNL--PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLR 300
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
E P ++ I C G ++ A + ++M + G N+V Y+ +I+ C++ V
Sbjct: 301 ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDG 360
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A L+ +M +G P T+NT+L GLC A +L++ + G LP + ++
Sbjct: 361 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQN---GCLPDNVTFNT 417
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW-LLLLLLNEM 509
LI LC+KG A + QM KG P+ +T+++++ L++ T L L NEM
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEM 473
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 204/421 (48%), Gaps = 35/421 (8%)
Query: 43 TPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+PS FN+ LD+L K ++D F+ + + Q D Y++ I +K C V GF
Sbjct: 70 SPSSFSFNNALDLLAKSGNLDRTWGFFTEYL--GRTQFDVYSFWITIKAFCENGNVSKGF 127
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+LL M++ GV PN IY LI + C+NG + +A+ + S M++ N ++I+I +
Sbjct: 128 ELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGF 187
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
K+ + L +K G +P++ T ++ C G++ A ++ +E ++G
Sbjct: 188 FKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNA 247
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
R G+V L+ M+R P T+N+L+ C TG LD AL
Sbjct: 248 VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYG 317
+K+ G+ VTY+ LI G G ++++ MED ISP Y ++
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG------ISPSKVTYTILMNT 361
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
R + ++A E M++ L P + I G C+ GN+ +A + + M+E PN
Sbjct: 362 FVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPN 421
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VIY+ +I+ YC+E +A + ++EM +G P +++ + + LC+ G A +L++
Sbjct: 422 DVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLK 481
Query: 436 E 436
E
Sbjct: 482 E 482
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 193/440 (43%), Gaps = 64/440 (14%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---EEPNDVTFSILIC 155
DGFKL+ + +G P+S +N + L K+G + R ++ + + +F I I
Sbjct: 59 DGFKLMVL---KGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIK 115
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
A+C+ N+ LL + + G P+V T ++E C G + A + + G
Sbjct: 116 AFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAA 175
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+ G K G ++M+ G LPN+ TYN LI+ YC G L A VF
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+++ G++ N VTY+ LI GLC G++ +L+ M+ + R +N ++ GL
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRT--FNMLMDGLC 293
Query: 320 RENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGN--------------------- 356
Q D+AL YL++++ L P V ++ I GF GN
Sbjct: 294 NTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKV 353
Query: 357 --------------VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+E A F M G VP+ Y LIH C + + EAS+L K M
Sbjct: 354 TYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSM 413
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P +NT+++G C++ N ALK +EE ++ G P Y I+ LC+
Sbjct: 414 VEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK---NGVTPNVASYISTIQILCKD 470
Query: 463 GGFQSASMLLVQMVGKGILP 482
G A LL +M G+ P
Sbjct: 471 GKSIEAKRLLKEMTEAGLKP 490
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 4/208 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F ++ GL ++ + + + + P+L +N ++ K +
Sbjct: 280 PTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSEL 339
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G+ TY ILM ++ + +++ H+MK G+ P+ Y LIH LC
Sbjct: 340 VREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCI 399
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M E PNDV ++ +I YCKE N AL LE+ G P+V +
Sbjct: 400 KGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVAS 459
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG 212
+++LC G+ ++A +L+E E G
Sbjct: 460 YISTIQILCKDGKSIEAKRLLKEMTEAG 487
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
D +I+A Q + + ++ + K M G+ P + +FN L L + GN+ E +
Sbjct: 42 DAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYL- 100
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
GR + IKA CE G LL QM G+ P+ + L+
Sbjct: 101 --GRTQFDVYSFWIT-IKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILI 149
>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/528 (26%), Positives = 231/528 (43%), Gaps = 63/528 (11%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDL---VSRFNMTPSLKIFNSILDVLVK- 58
+ S + + F+ +R L ++ + ++ +A DL ++ PS+K F +L V+V+
Sbjct: 30 YDTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRL 89
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+ A + + + G++ D T I++ LC V GF +L M G++P +
Sbjct: 90 KHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMT 149
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFSILICAYCKEENLVNALVLLEKSF 174
LI+ LC G V +A L+ ME+ P DV T+ +LI CK + + A+ L K
Sbjct: 150 LTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKME 209
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
+ P+VV + +++ LC G V +A+ + EM KG P
Sbjct: 210 ERNWKPNVVVYSTIMDGLCKDGLVSEALNLCS-------------------EMSGKGVRP 250
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N+ TY LI C G + ++M G+ + T + L+ C G++ ++
Sbjct: 251 NLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVI 310
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
M + EG + YNS+++ +N+ +EA+ M P V + I G+C
Sbjct: 311 GFMILTGEGPD--VFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWC 368
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
D N+ ++M + G VP+VV + LI +CQ R A EL M +G +P
Sbjct: 369 KDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQ 428
Query: 413 TFNTVLSGLCRQGNVGTALKLVE------------------EDMRGIGR--------GSL 446
T +L GLC+ + A+ L E + M G+ SL
Sbjct: 429 TCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL 488
Query: 447 PGSG------HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
PG G Y+ +IK LC++G A LL+ M G LPD T+N
Sbjct: 489 PGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYN 536
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 169/375 (45%), Gaps = 24/375 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D YTY +L+ GLC T + L M+ R KPN V+Y+T++ LCK+G V A +L
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLC 240
Query: 140 SDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
S+M PN VT++ LI C LL++ G D+ T+ +++ C
Sbjct: 241 SEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKE 300
Query: 196 GRVMDAVEILEE---SGEQGRL-------------GKVKGGCRFLKEMERKGCLPNVDTY 239
G+VM A ++ +GE + K+ R M +GCLP++ +
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVF 360
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
LI +C+ ++ + + +M G + VT+ TLI G C GR ++ M
Sbjct: 361 TSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMH- 419
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K G + +L GL + N EA+ + MEK L V S+ + G C G +
Sbjct: 420 -KYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKL 478
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
A F + +G NV Y +I C++ + +A +L+ M +G LP T+N
Sbjct: 479 NAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVF 538
Query: 418 LSGLCRQGNVGTALK 432
+ GL + + ++K
Sbjct: 539 VQGLLTKKEIARSIK 553
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 152/330 (46%), Gaps = 25/330 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I+GL + D + + M L+ N ++D KE +
Sbjct: 250 PNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSV 309
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ +G D +TY L+ CL N++ + ++ H+M SRG P+ V++ +LIH CK
Sbjct: 310 IGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCK 369
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ + + L+ +M + P+ VT++ LI +C+ + A L +G VP++ T
Sbjct: 370 DKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQT 429
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+L+ LC + +AV + E ME+ N+ Y+IL+
Sbjct: 430 CAVILDGLCKGNLLSEAVSLAE-------------------AMEKSNLDLNIVIYSILLD 470
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C G L++A ++F+ + G+ N TY +I+GLC G +D +L ME++ G
Sbjct: 471 GMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEEN--GC 528
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM 334
YN + GL + + +++YL M
Sbjct: 529 LPDNCTYNVFVQGLLTKKEIARSIKYLTIM 558
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 93/232 (40%), Gaps = 17/232 (7%)
Query: 278 IRGLCSGGR---IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+R LC G+ ID+ L + Q M K + + +L + R A+ +K +
Sbjct: 45 MRNLCKSGKVKNIDEALDLFQGMASMKPLPS--VKDFTLLLGVIVRLKHYTTAISLVKHI 102
Query: 335 EKLFPRAVDR---SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
D ++ I C V M + G P V+ LI+ C +
Sbjct: 103 FSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGN 162
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPG 448
V +A L+ M Y T+ +++GLC+ G+ A L+ +EE R P
Sbjct: 163 VAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEE------RNWKPN 216
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
YS ++ LC+ G A L +M GKG+ P+ +T+ L+ L W
Sbjct: 217 VVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRW 268
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 221/487 (45%), Gaps = 32/487 (6%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRK 70
S+F +IR + MI+ V+ +LV PS+ N IL +VK+ +L + +R
Sbjct: 915 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFR- 973
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G+ + T+ IL+ GLC+ + LL M+ G P V YNTL++ CK G
Sbjct: 974 EMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKG 1033
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A L+ M E + T+++ I C A +LL+K P+ VT
Sbjct: 1034 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 1093
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ G++ A ++ EM + PN TYN LI +
Sbjct: 1094 TLINGFVKEGKIGVAAQV-------------------FNEMSKFDLSPNCVTYNALIGGH 1134
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G + AL + + M+ G+ N VTY TL+ GLC + + ++L+ M + G
Sbjct: 1135 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR-VNDMVVG 1193
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I+ Y ++ GL + DEA++ + M K + P + S I GFC GN++ AK
Sbjct: 1194 HIA-YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 1252
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M G V N +IY LI+ +CQ V EA ++ M +G+ T N ++S LCR
Sbjct: 1253 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 1312
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G +G A K + R G +P S Y +I G +A M+ G P +
Sbjct: 1313 GKLGEAEKFLCHMSR---IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSF 1369
Query: 485 LTWNSLL 491
T+ SLL
Sbjct: 1370 FTYGSLL 1376
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 224/501 (44%), Gaps = 42/501 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P+ F +I GL + ++ KA +L+ + P++ +N++L+ K+ A
Sbjct: 982 PNVGTFNILINGLC---VEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 1038
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M+ G++ D TY + + LC +R + LL M+ + PN V YNTLI+
Sbjct: 1039 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 1098
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K GK+G A + ++M + PN VT++ LI +C + AL LL+ + G +
Sbjct: 1099 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 1158
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VT +L LC E+ L K R L+ M + Y +
Sbjct: 1159 EVTYGTLLNGLCK--------------HEKFELAK-----RLLERMRVNDMVVGHIAYTV 1199
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI C+ G+LD A+ + +M DG++ + +TY +LI G C G I +I+ M S
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVED 359
I Y++++Y + EA++ M A + +L C DG + +
Sbjct: 1260 LVLNKII--YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 1317
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A++ M G VPN + YDC+I+ Y A +M G P T+ ++L
Sbjct: 1318 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 1377
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPG---SGHYSPLIKALCEKGGFQSASMLLVQMV 476
GLC+ GN+ A K + +PG S Y+ L+ C+ G A L +MV
Sbjct: 1378 GLCKGGNLVEAKKFLNR------LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 1431
Query: 477 GKGILPDYLTWNSLLICLSQQ 497
+LPD T++SLL L ++
Sbjct: 1432 QNNVLPDSYTYSSLLTGLCRK 1452
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 226/513 (44%), Gaps = 30/513 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+E + T+I G + I + + +S+F+++P+ +N+++ D A
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG-DFEEALR 1145
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M A+G++ ++ TY L+ GLC + +LL M+ + + Y LI LC
Sbjct: 1146 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 1205
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNG + A L+ +M + P+ +T+S LI +C+ N+ +A ++ + + G V + +
Sbjct: 1206 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 1265
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ C G V +A+++ G R GK+ +FL M
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R G +PN TY+ +I+ Y G +A F+DM G +F TY +L++GLC GG +
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ K L + + YN++L + EA+ +M + P + S
Sbjct: 1386 VEAKKFLNRLHYIPGAVDSVM--YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 1443
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ G C G A F + G + PN V+Y CL+ + + A +EM
Sbjct: 1444 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 1503
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P FN ++ R+G + A MR G P Y+ L+ +K
Sbjct: 1504 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFST-MR--WWGVCPNLATYNILLHGFSKKQA 1560
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L M+ +GI PD LT++SL++ LS+
Sbjct: 1561 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 1593
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 203/486 (41%), Gaps = 31/486 (6%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
H I D ++ T++ ++ +++ V D + + N+ P ++S+L L ++
Sbjct: 1396 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKA 1455
Query: 63 LARAFYRKKMMASGVQGDDYT-YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ M G ++ Y L+ GL F M +G P++V +N
Sbjct: 1456 VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNA 1515
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I S + G++ +A S M PN T++IL+ + K++ L+ L L G
Sbjct: 1516 IIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREG 1575
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD +T ++ L + G G + L +M +G L +
Sbjct: 1576 IFPDKLTFHSLILGL-------------------SKSGIPDLGVKLLGKMIMEGTLADQF 1616
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T+NILI+ Y E+G + A D+ N M G+ + TY+ + GL + +L M
Sbjct: 1617 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 1676
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDG 355
++ G + + Y +++ G+ R A + +ME L V S + G G
Sbjct: 1677 LEN--GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 1734
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
EDA D M+ +P + + L+H +C++ ++ EA +L M G +N
Sbjct: 1735 KTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYN 1794
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ G+C G+ A +L EE MR R P Y+ L+ A+ LL +
Sbjct: 1795 VLIMGMCANGDSAAAFELYEE-MR--HRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1851
Query: 476 VGKGIL 481
+G++
Sbjct: 1852 QERGLI 1857
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 198/428 (46%), Gaps = 40/428 (9%)
Query: 28 NDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTY 84
NDV A L +R N TP FN IL LVK + +KM G++ +
Sbjct: 41 NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 100
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
IL+ C + F +L + G KPN++ NTLI LC NGK+ ++ +++
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160
Query: 145 --------------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
P+ TF+IL+ +CKE + A +L G P VVT +++
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
V +V A I M + G P++ +Y+ILI+ +C+
Sbjct: 221 GYFLVKQVNKAKSIFN-------------------TMAQLGVSPDIQSYSILINGFCKIK 261
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
++D A+++ +M I N VTY +LI GLC G+I LK++ M D G I
Sbjct: 262 MMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHD--RGQPPNIVT 319
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y+S+L L + +Q D A+ L QM+ + P ++ I G C G +EDA++ F+ ++
Sbjct: 320 YSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLL 379
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+G NV Y +I +C + EA L+ +M +G +P A T+ ++ L ++
Sbjct: 380 VKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENE 439
Query: 429 TALKLVEE 436
A KL+ E
Sbjct: 440 MAEKLLCE 447
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 199/410 (48%), Gaps = 20/410 (4%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
N V D L + + + P ++ +N ++ SL K+ L ME +PN V
Sbjct: 40 NNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 99
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ILI ++C+ ++ +A +L K G+ P+ +T+ +++ LC G++ D
Sbjct: 100 CNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHD--------- 150
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+ +GK+K +M + P+V T+ IL+ +C+ G + A +V M I GI
Sbjct: 151 KHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKP 210
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
VTY++L+ G +++ I M ++ G I Y+ ++ G + DEA+E
Sbjct: 211 GVVTYNSLMDGYFLVKQVNKAKSIFNTM--AQLGVSPDIQSYSILINGFCKIKMMDEAME 268
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
LK+M +++ P V S I G C G + A + D+M + G PN+V Y ++ A C
Sbjct: 269 LLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 328
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ +V A L+ +M G P T+ ++ GLC+ G + A K+ E+ + +G
Sbjct: 329 KNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLV---KGHNL 385
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ +I+ C+KG F A LL +M G +P+ T+ +++ L ++
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKK 435
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 156/298 (52%), Gaps = 27/298 (9%)
Query: 57 VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
+K+ +DL KM+ + D YT+ IL+ G C RV + +L +M +G+KP
Sbjct: 158 LKDAVDLFN-----KMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGV 212
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK 172
V YN+L+ +V +A+S+ + M + P+ ++SILI +CK + + A+ LL++
Sbjct: 213 VTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKE 272
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG----------------K 216
+P+VVT + +++ LC G++ A+++++E ++G+ +
Sbjct: 273 MHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQ 332
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
V L +M+ +G PN+ TY ILI C++G L+ A VF D+ + G + N TY
Sbjct: 333 VDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+I+G C G D+ L +L MED+ G Y ++ L+++++ + A + L +M
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDN--GCIPNAKTYEIIILSLFKKDENEMAEKLLCEM 448
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 37/180 (20%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDI 61
H Q P+ + ++I GL ++ I+ +K D + P++ ++SILD L K +
Sbjct: 274 HHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333
Query: 62 DLARAFYRKKMMASGVQGDDYTYAIL---------------------------------- 87
D A A + M G+Q + YTY IL
Sbjct: 334 DNAIALLTQ-MKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Query: 88 -MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN 146
++G C + LL M+ G PN+ Y +I SL K + A L+ +M E N
Sbjct: 393 MIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETN 452
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 217/448 (48%), Gaps = 19/448 (4%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ D Y L+ L N++ + M S+G+KP+ +N LI +LCK ++ A
Sbjct: 153 GLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPA 212
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+M +M P++ TF+ L+ + +E N+ A + E+ G VT+ ++
Sbjct: 213 ILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHG 272
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C GR+ +A+ ++E +G K EM+ KGC P+ TYN+LI S C G
Sbjct: 273 FCKEGRIEEALSFIDEMSNEG---KHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGK 329
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
L AL + +M+I G + N +TY+TLI G C +I++ +I ME +G Y
Sbjct: 330 LQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQME--IQGLSRNSVTY 387
Query: 312 NSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N+++ GL + + EA + + QM E L P + + FC +G+++ A M
Sbjct: 388 NTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTS 447
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P++V Y LI C+ RV AS L++ + G + +N V+ L ++
Sbjct: 448 NGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKE 507
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG-FQSASMLLVQMVGKGILPDYLTWN 488
A++L E +G+ P + Y + + L GG A +++M+ KG LP++ ++
Sbjct: 508 AMRLFREMEE---KGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFY 564
Query: 489 SL---LICLSQQTTWLLLL-LLNEMVSF 512
L L LS + T + L+ L+ E +F
Sbjct: 565 MLAEGLCSLSMEDTLIKLVDLVMEKANF 592
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 218/491 (44%), Gaps = 82/491 (16%)
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
++T A L+ L N +LL K +PNS IY ++ L K G + ++
Sbjct: 51 NFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSMKDIL 110
Query: 140 SDME----EPNDVTFSILICAYCKEE--------------------------NLVNALV- 168
+M+ + + I I +Y K E L+N LV
Sbjct: 111 QEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLNVLVD 170
Query: 169 -----LLEKSFSF----GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----- 214
L+E S G PDV T +++ LC ++ A+ ++EE G +
Sbjct: 171 GNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKT 230
Query: 215 -----------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL------- 256
G + G R ++M GC T N+L+ +C+ G ++ AL
Sbjct: 231 FTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMS 290
Query: 257 ---------DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+++N+MK G + TY+ LI LC G++ + L +L+ ME S G
Sbjct: 291 NEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEIS--GCARN 348
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN+++ G + + +EA E QME L +V + I G C V++A + D
Sbjct: 349 VITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMD 408
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
QMI EG P+ Y+ ++ +C+E +++A+++++ MT +G P T+ T++ GLC+ G
Sbjct: 409 QMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAG 468
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
V A +L +R I + + H Y+P+I+AL ++ + A L +M KG PD
Sbjct: 469 RVEVASRL----LRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDA 524
Query: 485 LTWNSLLICLS 495
T+ + LS
Sbjct: 525 FTYKIVFRGLS 535
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 121/260 (46%), Gaps = 21/260 (8%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M SG + TY L+ G C ++ + ++ M+ +G+ NSV YNTLI LCK+
Sbjct: 338 REMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKS 397
Query: 130 GKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A LM M +P+ T++ ++ +C+E ++ A +++ S G PD+VT
Sbjct: 398 RRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTY 457
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
++ LC GRV A +L +G + + K R +EME
Sbjct: 458 GTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEE 517
Query: 230 KGCLPNVDTYNILISSYCETG-VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P+ TY I+ +G + A+D +M G F ++ L GLCS D
Sbjct: 518 KGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMED 577
Query: 289 DGLKILQLMEDSKEGSKGRI 308
+K++ L+ + S+ +
Sbjct: 578 TLIKLVDLVMEKANFSQNEV 597
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 221/487 (45%), Gaps = 32/487 (6%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRK 70
S+F +IR + MI+ V+ +LV PS+ N IL +VK+ +L + +R
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFR- 222
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G+ + T+ IL+ GLC+ + LL M+ G P V YNTL++ CK G
Sbjct: 223 EMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKG 282
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A L+ M E + T+++ I C A +LL+K P+ VT
Sbjct: 283 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 342
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ G++ A ++ EM + PN TYN LI +
Sbjct: 343 TLINGFVKEGKIGVAAQVFN-------------------EMSKFDLSPNCVTYNALIGGH 383
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G + AL + + M+ G+ N VTY TL+ GLC + + ++L+ M + G
Sbjct: 384 CHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMR-VNDMVVG 442
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I+ Y ++ GL + DEA++ + M K + P + S I GFC GN++ AK
Sbjct: 443 HIA-YTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEII 501
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M G V N +IY LI+ +CQ V EA ++ M +G+ T N ++S LCR
Sbjct: 502 CRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRD 561
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G +G A K + R G +P S Y +I G +A M+ G P +
Sbjct: 562 GKLGEAEKFLCHMSR---IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSF 618
Query: 485 LTWNSLL 491
T+ SLL
Sbjct: 619 FTYGSLL 625
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 224/501 (44%), Gaps = 42/501 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P+ F +I GL + ++ KA +L+ + P++ +N++L+ K+ A
Sbjct: 231 PNVGTFNILINGLC---VEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 287
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M+ G++ D TY + + LC +R + LL M+ + PN V YNTLI+
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K GK+G A + ++M + PN VT++ LI +C + AL LL+ + G +
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VT +L LC E+ L K R L+ M + Y +
Sbjct: 408 EVTYGTLLNGLCK--------------HEKFELAK-----RLLERMRVNDMVVGHIAYTV 448
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI C+ G+LD A+ + +M DG++ + +TY +LI G C G I +I+ M S
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVED 359
I Y++++Y + EA++ M A + +L C DG + +
Sbjct: 509 LVLNKII--YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGE 566
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A++ M G VPN + YDC+I+ Y A +M G P T+ ++L
Sbjct: 567 AEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLK 626
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPG---SGHYSPLIKALCEKGGFQSASMLLVQMV 476
GLC+ GN+ A K + +PG S Y+ L+ C+ G A L +MV
Sbjct: 627 GLCKGGNLVEAKKFLNR------LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMV 680
Query: 477 GKGILPDYLTWNSLLICLSQQ 497
+LPD T++SLL L ++
Sbjct: 681 QNNVLPDSYTYSSLLTGLCRK 701
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 226/513 (44%), Gaps = 30/513 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+E + T+I G + I + + +S+F+++P+ +N+++ D A
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG-DFEEALR 394
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M A+G++ ++ TY L+ GLC + +LL M+ + + Y LI LC
Sbjct: 395 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 454
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNG + A L+ +M + P+ +T+S LI +C+ N+ +A ++ + + G V + +
Sbjct: 455 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 514
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ C G V +A+++ G R GK+ +FL M
Sbjct: 515 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R G +PN TY+ +I+ Y G +A F+DM G +F TY +L++GLC GG +
Sbjct: 575 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ K L + + YN++L + EA+ +M + P + S
Sbjct: 635 VEAKKFLNRLHYIPGAVDSVM--YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 692
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ G C G A F + G + PN V+Y CL+ + + A +EM
Sbjct: 693 SLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK 752
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P FN ++ R+G + A MR G P Y+ L+ +K
Sbjct: 753 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFST-MR--WWGVCPNLATYNILLHGFSKKQA 809
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L M+ +GI PD LT++SL++ LS+
Sbjct: 810 LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKS 842
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 204/486 (41%), Gaps = 31/486 (6%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
H I D ++ T++ ++ +++ V D + + N+ P ++S+L L ++
Sbjct: 645 HYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKA 704
Query: 63 LARAFYRKKMMASGVQGDDYT-YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ M G ++ Y L+ GL F M +G P++V +N
Sbjct: 705 VTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNA 764
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I S + G++ +A S M PN T++IL+ + K++ L+ L L G
Sbjct: 765 IIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREG 824
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD +T ++ L G + D G + L +M +G L +
Sbjct: 825 IFPDKLTFHSLILGLSKSG-IPDL------------------GVKLLGKMIMEGTLADQF 865
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T+NILI+ Y E+G + A D+ N M G+ + TY+ + GL + +L M
Sbjct: 866 TFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEM 925
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDG 355
++ G + + Y +++ G+ R A + +ME L V S + G G
Sbjct: 926 LEN--GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCG 983
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
EDA D M+ +P + + L+H +C++ ++ EA +L M G +N
Sbjct: 984 KTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYN 1043
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ G+C G+ A +L EE MR R P Y+ L+ A+ LL +
Sbjct: 1044 VLIMGMCANGDSAAAFELYEE-MR--HRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1100
Query: 476 VGKGIL 481
+G++
Sbjct: 1101 QERGLI 1106
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 226/512 (44%), Gaps = 61/512 (11%)
Query: 42 MTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
+ P +K N +L +L D ID+AR Y M+ G+ TY ++ C V +
Sbjct: 162 LLPDVKNCNRVLRLLRDRDNNIDVAREVY-NVMVECGICPTVVTYNTMLDSFCKKGMVQE 220
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILIC 155
+LL M++ G PN V YN L++ L +G++ +A+ L+ DM E + T+ LI
Sbjct: 221 ALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIR 280
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
YC++ + A L E+ S G VP VVT ++ LC GRV DA ++L+ +
Sbjct: 281 GYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMP 340
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
RLG + E+ + P+V TYN LI C G LD A+ +
Sbjct: 341 DLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLK 400
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGR-----------IDDGLKI------------LQL 296
++M G + T+ T +RG C G ++ GL+ L+L
Sbjct: 401 DEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKL 460
Query: 297 MEDSK----------EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ SK G + YN + GL++ EA E +K+M L P V
Sbjct: 461 GDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTY 520
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I + G++ A+ F +M+ +G P+VV Y LIH+Y R++ A EM
Sbjct: 521 TSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHE 580
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T+N +++GLC+ + A E +G P Y+ LI C G
Sbjct: 581 KGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ---AKGISPNKYTYTILINENCNLGH 637
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+Q A L M+ + I PD T SLL L++
Sbjct: 638 WQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 182/416 (43%), Gaps = 74/416 (17%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM------------------SDMEEPN-DV 148
+ G K + + Y+ ++ L +NG + A +M S++ P+ +
Sbjct: 73 RQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKL 132
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD-AVEILEE 207
+L+ Y K+ L L++ K S G +PDV +VL LL +D A E+
Sbjct: 133 ILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNV 192
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
E G + G V+ + L +M+ GC PN TYN+L++ +G
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
++ A ++ DM G+ + TYD LIRG C G+I++ ++ + E G+ + Y
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGE--EMLSRGAVPTVVTY 310
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
N+++YGL C G V DA++ D M+ +
Sbjct: 311 NTIMYGL---------------------------------CKWGRVSDARKLLDVMVNKN 337
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+P++V Y+ LI+ Y + + EA L E+ P T+NT++ GLCR G++ A+
Sbjct: 338 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAM 397
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+L +E I G P ++ ++ C+ G A L +M+ +G+ PD +
Sbjct: 398 RLKDE---MIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAY 450
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 154/350 (44%), Gaps = 28/350 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + T+I G R I + + ++ PS+ +N+++D L + D+D+A
Sbjct: 340 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRL 399
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G D +T+ ++G C + +L M +RG++P+ Y T I
Sbjct: 400 -KDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGEL 458
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G +A + +M P+ +T+++ I K NL A L++K G VPD V
Sbjct: 459 KLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHV 518
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T T ++ G + A + E +G G++K EM
Sbjct: 519 TYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEM 578
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG PNV TYN LI+ C+ +D A + F +M+ GIS N TY LI C+ G
Sbjct: 579 HEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHW 638
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ L++ + M D + I P + L + +D L ++ +E +
Sbjct: 639 QEALRLYKDMLDRE------IQPDSCTHRSLLKHLNKDYKLHVVRHLENV 682
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 43/269 (15%)
Query: 226 EMERKGCLPNVDTYNILISSYCET-GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M KG LP+V N ++ + +D A +V+N M GI VTY+T++ C
Sbjct: 156 KMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKK 215
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAV 342
G + EAL+ L QM+ + P V
Sbjct: 216 GMVQ-------------------------------------EALQLLFQMQAMGCSPNDV 238
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ + G G +E AK M+ G +V YD LI YC++ ++ EAS L +EM
Sbjct: 239 TYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEM 298
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G +P T+NT++ GLC+ G V A KL++ + + +P Y+ LI
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDV---MVNKNLMPDLVSYNTLIYGYTRL 355
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A +L ++ + + P +T+N+L+
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLI 384
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 370 EGGVPNV-VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E +P+V +I D L+ Y ++ + + + +M G LP N VL L + N
Sbjct: 124 EVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNI 183
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+ V M + G P Y+ ++ + C+KG Q A LL QM G P+ +T+N
Sbjct: 184 DVAREVYNVM--VECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYN 241
Query: 489 SLLICLSQ 496
L+ LS
Sbjct: 242 VLVNGLSH 249
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 243/512 (47%), Gaps = 33/512 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSR-FNMTPSLKIFNSILDVLVK-EDIDLA 64
SP E++ I VI+ + ++ ++ V + + P + NS+L++LVK I++A
Sbjct: 126 SPTREAMSI-VIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIA 184
Query: 65 RAFYRKKMMASGVQG---DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
R Y + + G D+Y+ I++KGLC ++ +G KL+ +G PN + YNT
Sbjct: 185 RKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNT 244
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI CK G + A L +++ P T+ +I +CK+ + LL + S G
Sbjct: 245 LIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
+V +++ G ++ AVE +E E G R GKV
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ L++ KG +PN +Y LI +YC+ G D A + +M G + VTY L+ GL
Sbjct: 365 QLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGL 424
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFP 339
G +D L I + M + G YN ++ GL ++ + A L +M + + P
Sbjct: 425 VVAGEVDVALTIREKMLE--RGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLP 482
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
A + + GF +GN+++A++ F+ IE+G P +V Y+ +I YC+ +++A +
Sbjct: 483 DAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACI 542
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
M P T++TV+ G +Q ++ A K+ E ++ + P Y+ LI
Sbjct: 543 NRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCK---PNVVTYTSLINGF 599
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C KG + + +M G++P+ +T++ L+
Sbjct: 600 CRKGDLHRSLKIFREMQACGLVPNVVTYSILI 631
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 192/404 (47%), Gaps = 32/404 (7%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLL 170
N Y++L+ L ++ ++ +M P SI+I AY + AL L
Sbjct: 93 NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152
Query: 171 EKSF-SFGFVPDVVTITKVLELLCSVGRVMDAV----EILEESGEQGRL----------- 214
++ + PDV+ +L +L +GR+ A E+LE G R
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212
Query: 215 -----GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
GK++ G + +++ +GC+PN+ YN LI YC+ G ++ A +F ++K+ G
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
TY +I G C G ++L ME + G + YN+++ Y+ +A+E
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLL--MEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVE 330
Query: 330 YLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++ M + P V + I G C DG V +A + +Q + +G +PN Y LIHAYC
Sbjct: 331 TIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYC 390
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
++ AS + EMT G+ P T+ ++ GL G V AL + E+ + RG P
Sbjct: 391 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLE---RGVFP 447
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G Y+ L+ LC+K +A +LL +M+ + +LPD + +L+
Sbjct: 448 DAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 491
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/521 (25%), Positives = 239/521 (45%), Gaps = 53/521 (10%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ +N+++D K+ D+++A + ++ G TY ++ G C +
Sbjct: 237 PNIIFYNTLIDGYCKKGDMEMANGLF-IELKLKGFLPTVETYGAIINGFCKKGDFKAIDR 295
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M SRG+ N +YNT+I + K+G + +A + M E P+ VT++ LI C
Sbjct: 296 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSC 355
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR----- 213
++ + A LLE++ G +P+ + T ++ C G A L E E+G
Sbjct: 356 RDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLV 415
Query: 214 -----------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
G+V ++M +G P+ YNIL+S C+ L +A + +M
Sbjct: 416 TYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEM 475
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + Y TL+ G G +D+ K+ +L + +G I YN+++ G +
Sbjct: 476 LDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE--KGMNPGIVGYNAMIKGYCKFG 533
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+A+ + +M+K L P S I G+ +++ A++ F +M++ PNVV Y
Sbjct: 534 MMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYT 593
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI+ +C++ + + ++ +EM G +P T++ ++ C++ + A EE +
Sbjct: 594 SLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMN 653
Query: 441 IGRGSLPGSGHYSPLI--------KALCEKGG-FQ--SASMLLV---QMVGKGILPDYLT 486
+P ++ L+ +A+ EKG FQ SM L +M+ G P
Sbjct: 654 ---KCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAA 710
Query: 487 WNSLLICLSQQTTWLLLLLL-NEM---------VSFVMVVH 517
+NS+LICL Q + L L N+M VSFV ++H
Sbjct: 711 YNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLH 751
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 193/456 (42%), Gaps = 44/456 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I G R +++ + + + P+ + ++ K+ + +
Sbjct: 342 PDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNW 401
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G + D TY L+ GL + V + M RGV P++ IYN L+ LCK
Sbjct: 402 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 461
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K+ A+ L+++M + P+ ++ L+ + + NL A L E + G P +V
Sbjct: 462 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVG 521
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL-----------GKVK-----GGCRFLKEME 228
+++ C G + DA+ + ++ G VK G + +EM
Sbjct: 522 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 581
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ C PNV TY LI+ +C G L +L +F +M+ G+ N VTY LI C ++
Sbjct: 582 KMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLI 641
Query: 289 DGLKILQ--LMED---------------SKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
D + LM SK G++ N ++EN+Q L +
Sbjct: 642 DAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNE-----FQENKQSMFLNFF 696
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M + PR+ + ++ C G A + ++M +G +P+ V + L+H C E
Sbjct: 697 GRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLE 756
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
R +E ++ L IA ++++L QG
Sbjct: 757 GRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQG 792
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 120/292 (41%), Gaps = 47/292 (16%)
Query: 286 RIDD---GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
RI D GLK + + Y+S+L L R E L+ M E++ P
Sbjct: 69 RIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPT 128
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG-VPNVVIYDCLIHAYCQEERVREASELM 399
S+ I + G VE A + +++ P+V+ + L++ + R+ A +L
Sbjct: 129 REAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLY 188
Query: 400 KEM---TGHGYLPIASTFNTVL-SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EM G G + + ++ GLC++G + KL+E+ G+G +P Y+ L
Sbjct: 189 DEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRW---GQGCIPNIIFYNTL 245
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSFV 513
I C+KG + A+ L +++ KG LP T+ +++ C
Sbjct: 246 IDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFC-------------------- 285
Query: 514 MVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
K+ ++++ L S GL ++ + IID R + GH+
Sbjct: 286 ----------KKGDFKAIDRLLMEMNS--RGLTVNVQVYNTIIDARYKHGHI 325
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/508 (26%), Positives = 228/508 (44%), Gaps = 47/508 (9%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
+IQ PP F +I ++ M V++ + F P + +NSIL V+V++++ L
Sbjct: 126 NIQIPP--PTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFL 183
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M+ + T+ IL+ GLC + D K+ M +G+ PN++IY ++
Sbjct: 184 LALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC+ + L++ M+ P+ +T + L+ +CK + A LL+ G+V
Sbjct: 244 SGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+ + +++ L R +V+ CR +M + G P+V Y
Sbjct: 304 LGIKGYSSLIDGLFRAKRY----------------DEVQEWCR---KMFKAGIEPDVVLY 344
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
ILI +CE G++D AL++ NDM G+S + Y+ LI+G C G +D + LQL E
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA-RSLQL-EI 402
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNV 357
SK Y ++ G+ R DEA + QME L P + + I G C G +
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462
Query: 358 EDAKRCFDQMIEEGGVPNVVI--------------YDCLIHAYCQEERVREASELMKEMT 403
E+A+ F +M E G P++ + ++ C+ + +A +L+ ++
Sbjct: 463 EEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLA 521
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G +P T+N +++G C+ N+ A KL E +G P S Y LI
Sbjct: 522 DSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQL---KGHSPDSVTYGTLIDGFHRVD 578
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +L QMV G P + L+
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLM 606
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 207/531 (38%), Gaps = 106/531 (19%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PP+ I+ ++ GL +A+ +DV + + + P N++LD K ID A A
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292
Query: 67 FYR----------------------------------KKMMASGVQGDDYTYAILMKGLC 92
+ +KM +G++ D Y IL++G C
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
V +L+ M RG+ P++ YN LI C G + +ARSL ++ + P
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC 412
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG------------ 196
T++ILIC C+ L A + + + G P ++T +++ LC G
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472
Query: 197 -----------------RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
RVMD + G + + L ++ G +P++ TY
Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTY 532
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N+LI+ +C+ ++ A +F ++++ G S + VTY TLI G R +D ++L M
Sbjct: 533 NVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM-- 590
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD-GNVE 358
K G + Y ++ R+ + A + + P D +LK+ + G +E
Sbjct: 591 VKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELE 650
Query: 359 DAKRCFDQM------------------------IEEGGVPNVVIYDC-----------LI 383
A RC +M EE +V+ +C LI
Sbjct: 651 KAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLI 710
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ C++ + A ++ G++ + N +L L Q + AL L+
Sbjct: 711 NGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLL 761
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 126/306 (41%), Gaps = 36/306 (11%)
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
G RF R+ + T+N++I + D+ + ++K I T+ LI
Sbjct: 80 GFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIA 139
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
G + ++ M+D G K + YNS+L+ + ++ AL QM KL
Sbjct: 140 AYAKSGMAEKAVESFGKMKDF--GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY 197
Query: 340 RAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
+ IL G C +G +DA + FD+M ++G PN +IY ++ CQ +R +
Sbjct: 198 NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHR 257
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL------------------------ 433
L+ M G P + T N +L G C+ G + A L
Sbjct: 258 LLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLF 317
Query: 434 -------VEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
V+E R + + + P Y+ LI+ CE G A +L M +G+ PD
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTY 377
Query: 486 TWNSLL 491
+N+L+
Sbjct: 378 CYNALI 383
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 30/311 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
D + T++ L + +I K ++ + P + +N +++ K ++I+ A +
Sbjct: 493 DTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLF 552
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R+ + G D TY L+ G +R D F++L M G P+S +Y L+ C+
Sbjct: 553 RE-LQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCR 611
Query: 129 NGKVGRARSL----MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A SL + + D T + + K E LLE +F ++
Sbjct: 612 KGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNF-EIAP 670
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T L LC R +A++I LKE + N + +LI+
Sbjct: 671 YTIWLIGLCQARRSEEALKIF----------------LVLKECQMD---VNPPSCVMLIN 711
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME----DS 300
C+ G L+ A+D+F G + L+R L ++ L +L M D
Sbjct: 712 GLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDL 771
Query: 301 KEGSKGRISPY 311
E RI Y
Sbjct: 772 DEYLHHRIKSY 782
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 148/557 (26%), Positives = 249/557 (44%), Gaps = 69/557 (12%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP I + + + ++R R + D+V +L+ + + S+ + +I VL
Sbjct: 115 MPRVIHTTETCNYVLEMLRA---HRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRG 171
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+KM G + Y+Y L+ L + + K+ M S G+KP+ Y+
Sbjct: 172 GLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYS 231
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
L+ +L K + L+ +ME PN TF+I I + + A +L++
Sbjct: 232 ALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDA 291
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEI-------------------LEESGEQGRLGKV 217
G PDVVT T +++ LC+ G++ +A E+ L++ + G L +
Sbjct: 292 GCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAI 351
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
K F EME G LP+V T+ ILI + C+ G +D A + MK G++ N TY+TL
Sbjct: 352 K---EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408
Query: 278 IRGLCSGGRIDDGLKILQLMED-----------------SKEGSKGR------------- 307
I GL R+D+ L++ ME K G G+
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468
Query: 308 ---ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I N+ LY L + + +EA E+ ++K L P A+ ++ + + G V+DA +
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIK 528
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E G P VVI + LI + +RV EA ++ + M P T+NT+L+GL
Sbjct: 529 LLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLG 588
Query: 423 RQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
++G V A L +G I P + ++ L+ LC+ G A +L +M
Sbjct: 589 KEGRVQEATAL----FKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF 644
Query: 482 PDYLTWNSLLICLSQQT 498
PD LT+N+++ L ++
Sbjct: 645 PDVLTYNTVIYGLIKEN 661
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 215/451 (47%), Gaps = 26/451 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + ++ LG+ R I V+ + + P++ F + +L + ID A
Sbjct: 225 PSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGI 284
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M +G D TY +L+ LC ++ + +L MK+ KP+ V Y TL+
Sbjct: 285 L-KRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFS 343
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G + + S+ME P+ VTF+ILI A CK + A L+ G P++
Sbjct: 344 DHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLH 403
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESGEQ-------------GRLGKVKGGCRFLKEM 227
T ++ L + R+ +A+E+ +E G + G+ G+ + ++M
Sbjct: 404 TYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKM 463
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G +PN+ N + S E G L+ A + FN +K G++ + +TY+ L+R GR+
Sbjct: 464 KTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRV 523
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRS 345
DD +K+L ME++ G + NS++ LY+ ++ DEA + ++M+ KL P V +
Sbjct: 524 DDAIKLLSEMEEN--GCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYN 581
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G +G V++A F MI + PN + ++ L+ C+ V A +++ MT
Sbjct: 582 TLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEM 641
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P T+NTV+ GL ++ V A L +
Sbjct: 642 NCFPDVLTYNTVIYGLIKENRVNYAFWLFHQ 672
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 144/548 (26%), Positives = 238/548 (43%), Gaps = 71/548 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA-RA 66
PD + ++R G+A ++D +K + P + I NS++D L K D +D A +
Sbjct: 505 PDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKM 564
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F R K M + TY L+ GL RV + L M + PN++ +NTL+ L
Sbjct: 565 FQRMKEMK--LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKNG+V A ++ M E P+ +T++ +I KE N VN L PD
Sbjct: 623 CKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKE-NRVNYAFWLFHQMKKVIYPDY 681
Query: 183 VTITKVLELLCSVGRVMDAV----EILEESGE----------------QGRLGK------ 216
VT+ +L + GR+ DA E + G+ + +G+
Sbjct: 682 VTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAE 741
Query: 217 -----------------VKGGCR----------FLKEMERKGCLPNVDTYNILISSYCET 249
VK C+ FLK + P+++ YN LI +
Sbjct: 742 SLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKA 801
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ + A +F MK G + + TY+ + L G+I + + + M G K
Sbjct: 802 RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM--LFRGCKPNTI 859
Query: 310 PYNSVLYGLYRENQQDEALE-YLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+N V++GL + N D+A++ Y M F P I G G +E+AK+ F++M
Sbjct: 860 THNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEM 919
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
++ G +PN +Y+ L++ + ++ V A EL + M G P +++ ++ LC G V
Sbjct: 920 LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKV 979
Query: 428 GTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
AL EE + G+ P Y+ +I L + A L +M +GI PD T
Sbjct: 980 DDALHYFEELKLSGLD----PDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYT 1035
Query: 487 WNSLLICL 494
+N+L++ L
Sbjct: 1036 YNALILNL 1043
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 221/547 (40%), Gaps = 63/547 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +I L A +N+ + + + P + ++LD D+D + F
Sbjct: 295 PDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEF 354
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M A G D T+ IL+ LC +V + F L VMK +GV PN YNTLI L
Sbjct: 355 W-SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLL 413
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ ++ A L + ME E T+ + I Y K A+ EK + G VP++V
Sbjct: 414 RLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIV 473
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESGEQ-------------GRLGKVKGGCRFLKEM 227
L L GR+ +A E L++ G G+ G+V + L EM
Sbjct: 474 ACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEM 533
Query: 228 ERKGC-----------------------------------LPNVDTYNILISSYCETGVL 252
E GC P V TYN L++ + G +
Sbjct: 534 EENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRV 593
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A +F M D N ++++TL+ LC G +D LK+L M ++ + YN
Sbjct: 594 QEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRM--TEMNCFPDVLTYN 651
Query: 313 SVLYGLYRENQQDEALEYLKQMEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE- 370
+V+YGL +EN+ + A QM+K ++P V + G DG +EDA R + +
Sbjct: 652 TVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHV 711
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + ++ L+ E + ++ + + + S ++ LC+ G A
Sbjct: 712 GDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDA 771
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ + + P Y+ LI L + + A L +M G PD T+N
Sbjct: 772 YNVFLKLTKSFC--ITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLF 829
Query: 491 LICLSQQ 497
L L +
Sbjct: 830 LDALGKS 836
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 220/508 (43%), Gaps = 32/508 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ F T++ L + ++ +K ++ N P + +N+++ L+KE+ + AF
Sbjct: 609 PPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKEN-RVNYAF 667
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL-HVMKSRGVKPNSVIYNTLIHSL 126
+ M + D T L+ G+ R+ D F++ + G + + L+ +
Sbjct: 668 WLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGI 727
Query: 127 CKNGKVGR----ARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSFSFGFVPD 181
++G+ A SL+ + +D L+ CK V+A V L+ + SF P
Sbjct: 728 LIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPS 787
Query: 182 VVTITKVLELLC----------------SVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
+ +++ L + G D G+ GK+K +
Sbjct: 788 LEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYE 847
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +GC PN T+NI+I ++ LD A+D++ D+ S TY LI GL G
Sbjct: 848 EMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLG 907
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
R+++ + + M D G YN ++ G ++ + A E ++M E + P
Sbjct: 908 RLEEAKQFFEEMLDY--GCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S+ + C+ G V+DA F+++ G P++V Y+ +I+ + +RV EA L EM
Sbjct: 966 YSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR 1025
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEK 462
G P T+N ++ L G V A K+ EE ++G+ P Y+ LI+
Sbjct: 1026 NRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLE----PNVFTYNALIRGHSMS 1081
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSL 490
G A + +M+ G P+ T+ L
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 229/481 (47%), Gaps = 36/481 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + +I G + I + ++ D + + ++ +N+++ + K ++A+A
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG-EMAKAMS 402
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ +G++ D +TY +L+ G ++ + +LL MK+R + P+ Y+ LI LC
Sbjct: 403 LFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLC 462
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ + +A ++ M +PN + LI AY +E A+ LL+ + G +PD+
Sbjct: 463 HSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLF 522
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ LC +V +A +L + GE KG PN TY I
Sbjct: 523 CYNCLIIGLCRAKKVEEAKMLLVDMGE-------------------KGIKPNAHTYGAFI 563
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ Y ++G + A F DM GI N V Y LI+G C G + L + M + +G
Sbjct: 564 NLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLE--KG 621
Query: 304 SKGRISPYNSVLYGLYRENQQDEA----LEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
I Y+++++ L + + EA L++LK + P + I GFC +G++E
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT--GVVPDVFLYNSLISGFCKEGDIEK 679
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + +D+M+ G PN+V+Y+ LI+ C+ V +A EL E+ +P T++T++
Sbjct: 680 ASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIID 739
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
G C+ GN+ A KL +E I +G P Y LI ++G + A L + K
Sbjct: 740 GYCKSGNLTEAFKLFDE---MISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796
Query: 480 I 480
+
Sbjct: 797 V 797
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 145/553 (26%), Positives = 253/553 (45%), Gaps = 58/553 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + +I GL + + + D + R + P++ ++ +++ V+E
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+A+GV D + Y L+ GLC +V + LL M +G+KPN+ Y I+ K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G++ A DM PN+V ++ILI +C N V AL + G +PD+
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+ ++ L G+ +A+ + + + G + G ++ + EM
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PN+ YN LI+ C+ G + A ++F++++ + + VTY T+I G C G +
Sbjct: 689 HNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLT 748
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
+ K+ M SKG ISP Y ++ G +E ++AL LF A +
Sbjct: 749 EAFKLFDEMI-----SKG-ISPDGYIYCILIDGCGKEGNLEKALS-------LFHEAQQK 795
Query: 345 SLKILG--------FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
S+ L FC G V +A+ FD M+++ PN+V Y LI AY + E + EA
Sbjct: 796 SVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAE 855
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPL 455
+L +M +P T+ ++L + GN + L ++ + RGI ++ Y +
Sbjct: 856 QLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA----YGVM 911
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSFV 513
A C++G A LL + + +GI + +++L+ +C +Q + +L LL+EM
Sbjct: 912 ASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQIS-TVLELLSEMGK-- 968
Query: 514 MVVHELSAKEKRC 526
ELS K C
Sbjct: 969 ---EELSLSSKTC 978
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 185/410 (45%), Gaps = 29/410 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME--- 143
LM+ L N +G +K+ M + P+ Y +I + CK G V + + ++S+ME
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC 272
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+PN T++ I C+ + AL + + G PD T T +++ C R +A
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
I E M G PN TY LI + + G ++ AL + ++M
Sbjct: 333 IFE-------------------SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ N VTY+ +I G+ G + + + M + G + YN ++ G + +
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA--GLEPDTWTYNLLIDGYLKSHD 431
Query: 324 QDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+A E L +M+ KL P S+ I G C +++ A DQMI G PNV +Y
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI AY QE R A EL+K M +G LP +N ++ GLCR V A K++ DM
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA-KMLLVDMG-- 548
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P + Y I + G Q A M+ GI+P+ + + L+
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 199/452 (44%), Gaps = 68/452 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN------MTPSLKIFNSILDVLVKEDID 62
P+ I+ +I+G DV + +S F + P ++ +++I+ L K
Sbjct: 589 PNNVIYTILIKGHC------DVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKT 642
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
K + +GV D + Y L+ G C + +L M G+ PN V+YNTL
Sbjct: 643 KEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I+ LCK G+V +AR L ++EE P+ VT+S +I YCK NL A L ++ S G
Sbjct: 703 INGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGI 762
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRF 223
PD +++ G + A+ + E+ ++ + GKV
Sbjct: 763 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAREL 822
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+M K PN+ TY ILI +Y + +++ A +F DM+ I N +TY +L L S
Sbjct: 823 FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL---LLS 879
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
+I + K++ L +D + R +++ YG+
Sbjct: 880 YNQIGNRFKMISLFKDME----ARGIACDAIAYGVMAS---------------------- 913
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+C +G +A + ++ + EG ++D LI C+E+++ EL+ EM
Sbjct: 914 ------AYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM- 966
Query: 404 GHGYLPIAS-TFNTVLSGLCRQGNVGTALKLV 434
G L ++S T NT+L G + GN A K++
Sbjct: 967 GKEELSLSSKTCNTLLLGFYKSGNEDEASKVL 998
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 157/333 (47%), Gaps = 29/333 (8%)
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VPDV T T V++ C VG V+ +G++ L EME++ C PN+ T
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVI-----------KGKM--------VLSEMEKE-CKPNLFT 278
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN I C+TG +D AL+V M G+ + TY L+ G C R + I + M
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
S G Y +++ G +E +EAL +M L V + I G G
Sbjct: 339 SS--GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGE 396
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ A F++M+ G P+ Y+ LI Y + + +A EL+ EM P T++
Sbjct: 397 MAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV 456
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++SGLC ++ A +++++ +R G P Y LIKA ++ ++ A LL M+
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIR---NGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMI 513
Query: 477 GKGILPDYLTWNSLLI--CLSQQTTWLLLLLLN 507
G+LPD +N L+I C +++ +LL++
Sbjct: 514 ANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 152/334 (45%), Gaps = 28/334 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ ++ T+I GL + + + D + ++ P + +++I+D K +L AF
Sbjct: 694 PNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSG-NLTEAFK 752
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M++ G+ D Y Y IL+ G + L H + + V S +N+LI S C
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA-FNSLIDSFC 811
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+GKV AR L DM + PN VT++ILI AY K E + A L + +P+ +
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +L +G + + K+ME +G + Y ++
Sbjct: 872 TYTSLLLSYNQIGNRFKMISLF-------------------KDMEARGIACDAIAYGVMA 912
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S+YC+ G AL + N ++GI +D LI LC +I L++L M KE
Sbjct: 913 SAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM--GKEE 970
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
N++L G Y+ +DEA + L M++L
Sbjct: 971 LSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 6/258 (2%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N+ ++I I + G L+ A VF +G + + L+R L + K+
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-LFPRAVDRSLKILGFCV 353
M ++K + Y +V+ + + L +MEK P + I G C
Sbjct: 231 GSMVEAKIVPD--VYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQ 288
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G V++A M+E+G P+ Y L+ +C+++R +EA + + M G P T
Sbjct: 289 TGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFT 348
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ ++ G ++GN+ AL++ +E I RG Y+ +I + + G A L
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDE---MITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFN 405
Query: 474 QMVGKGILPDYLTWNSLL 491
+M+ G+ PD T+N L+
Sbjct: 406 EMLMAGLEPDTWTYNLLI 423
>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 218/453 (48%), Gaps = 35/453 (7%)
Query: 59 EDIDLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+++ L AF+ + M G + D + L+ LC T ++ K++ +M G+ P++
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
Y L+ SLC+ G VG A L+ MEE N T++ L+ C NL +L LL++
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G VP+ T + +LE +E G + L E+ KG
Sbjct: 194 IQKGLVPNAYTYSFLLE------------AAYKERG-------ADEASKLLDEIIAKGGK 234
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN+ +YN+L++ C+ G + A+ +F ++ G S N V+Y+ L+R LC+ GR ++ +
Sbjct: 235 PNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVL 294
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
L M D E S ++ YN ++ L + + ALE L++M + P A + I
Sbjct: 295 LAEM-DGDERSPSTVT-YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C D V+ +C DQM+ PN Y+ I C+E V+EA +++ + +
Sbjct: 353 CKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQ 411
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+ V++ LCR+GN A +L+ E + G P S YS LI+ LC +G A +
Sbjct: 412 EFYKIVITSLCRKGNTYPAFQLLYEMTK---YGFTPDSFTYSSLIRGLCMEGMLNEA-IE 467
Query: 472 LVQMVGKGILPDYLTWNSLLI--CLSQQTTWLL 502
+ ++ + I D +NSL++ C S++T L
Sbjct: 468 IFSVMEENIKLDTENYNSLILGCCKSRRTDLAL 500
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 26/388 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM G + TY L++GLC+ + +LL + +G+ PN+ Y+ L+ + K
Sbjct: 157 KMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKER 216
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A L+ ++ +PN V++++L+ CKE +A+ L + S GF P+VV+
Sbjct: 217 GADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYN 276
Query: 187 KVLELLCSVGRVMDAVEILEE-SGEQ------------GRL---GKVKGGCRFLKEMERK 230
+L LC+ GR +A +L E G++ G L G+ + L+EM R
Sbjct: 277 ILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRA 336
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P +YN +I+ C+ +D + + M + N TY+ I LC G + +
Sbjct: 337 RFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEA 395
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
I+Q + + + S Y V+ L R+ A + L +M K P + S I
Sbjct: 396 FSIIQSLGNKQHFSTQEF--YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C++G + +A F M EE + Y+ LI C+ R A ++ + M G GYL
Sbjct: 454 RGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE 436
+T+ ++ G+ + + A +++ E
Sbjct: 513 ANETTYTILVEGIIHEKEMDLATEVLRE 540
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 182/403 (45%), Gaps = 33/403 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + + + +++RGL + ++ D + + + P+ ++ +L+ KE +
Sbjct: 164 PTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASK 223
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++A G + + +Y +L+ GLC R D +L + S+G PN V YN L+ SLC
Sbjct: 224 LLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLC 283
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+++M+ P+ VT++ILI + +AL +LE+ F P
Sbjct: 284 NEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTAS 343
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ LC R +D V + L +M + C PN TYN I
Sbjct: 344 SYNPIIARLCK-DRKVDLV------------------VKCLDQMMYRHCNPNEGTYNA-I 383
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVT---YDTLIRGLCSGGRIDDGLKILQLMEDS 300
++ CE G++ A + + G +F T Y +I LC G ++L M +
Sbjct: 384 ATLCEEGMVQEAFSIIQSL---GNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEM--T 438
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR-SLKILGFCVDGNVED 359
K G Y+S++ GL E +EA+E ME+ + + ILG C +
Sbjct: 439 KYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRTDL 498
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
A F+ M+ +G + N Y L+ E+ + A+E+++E+
Sbjct: 499 ALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 25/233 (10%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ + + +Y ++ LC +V K L M R PN YN I +LC+
Sbjct: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEE 389
Query: 130 GKVGRARSLMSDMEEPNDVT----FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G V A S++ + + + I+I + C++ N A LL + +GF PD T
Sbjct: 390 GMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 449
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ ++ LC G + +A+EI E +L + + YN LI
Sbjct: 450 SSLIRGLCMEGMLNEAIEIFSVMEENIKL--------------------DTENYNSLILG 489
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
C++ D ALDVF M G N TY L+ G+ +D ++L+ ++
Sbjct: 490 CCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 542
>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Cucumis sativus]
Length = 566
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 217/449 (48%), Gaps = 35/449 (7%)
Query: 59 EDIDLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+++ L AF+ + M G + D + L+ LC T ++ K++ +M G+ P++
Sbjct: 74 KELRLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAA 133
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
Y L+ SLC+ G VG A L+ MEE N T++ L+ C NL +L LL++
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G VP+ T + +LE +E G + L E+ KG
Sbjct: 194 IQKGLVPNAYTYSFLLE------------AAYKERG-------ADEASKLLDEIIAKGGK 234
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN+ +YN+L++ C+ G + A+ +F ++ G S N V+Y+ L+R LC+ GR ++ +
Sbjct: 235 PNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVL 294
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
L M D E S ++ YN ++ L + + ALE L++M + P A + I
Sbjct: 295 LAEM-DGDERSPSTVT-YNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARL 352
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C D V+ +C DQM+ PN Y+ I C+E V+EA +++ + +
Sbjct: 353 CKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHFSTQ 411
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+ V++ LCR+GN A +L+ E + G P S YS LI+ LC +G A +
Sbjct: 412 EFYKIVITSLCRKGNTYPAFQLLYEMTK---YGFTPDSFTYSSLIRGLCMEGMLNEA-IE 467
Query: 472 LVQMVGKGILPDYLTWNSLLI--CLSQQT 498
+ ++ + I D +NSL++ C S++T
Sbjct: 468 IFSVMEENIKLDTENYNSLILGCCKSRRT 496
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 177/388 (45%), Gaps = 26/388 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM G + TY L++GLC+ + +LL + +G+ PN+ Y+ L+ + K
Sbjct: 157 KMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKER 216
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A L+ ++ +PN V++++L+ CKE +A+ L + S GF P+VV+
Sbjct: 217 GADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYN 276
Query: 187 KVLELLCSVGRVMDAVEILEE-SGEQ------------GRL---GKVKGGCRFLKEMERK 230
+L LC+ GR +A +L E G++ G L G+ + L+EM R
Sbjct: 277 ILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRA 336
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P +YN +I+ C+ +D + + M + N TY+ I LC G + +
Sbjct: 337 RFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEA 395
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
I+Q + + + S Y V+ L R+ A + L +M K P + S I
Sbjct: 396 FSIIQSLGNKQHFSTQEF--YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C++G + +A F M EE + Y+ LI C+ R A ++ + M G GYL
Sbjct: 454 RGLCMEGMLNEAIEIFSVM-EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE 436
+T+ ++ G+ + + A +++ E
Sbjct: 513 ANETTYTILVEGIIHEKEMDLATEVLRE 540
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 182/403 (45%), Gaps = 33/403 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + + + +++RGL + ++ D + + + P+ ++ +L+ KE +
Sbjct: 164 PTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASK 223
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++A G + + +Y +L+ GLC R D +L + S+G PN V YN L+ SLC
Sbjct: 224 LLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLC 283
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+++M+ P+ VT++ILI + +AL +LE+ F P
Sbjct: 284 NEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTAS 343
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ LC R +D V + L +M + C PN TYN I
Sbjct: 344 SYNPIIARLCK-DRKVDLV------------------VKCLDQMMYRHCNPNEGTYNA-I 383
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVT---YDTLIRGLCSGGRIDDGLKILQLMEDS 300
++ CE G++ A + + G +F T Y +I LC G ++L M +
Sbjct: 384 ATLCEEGMVQEAFSIIQSL---GNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEM--T 438
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR-SLKILGFCVDGNVED 359
K G Y+S++ GL E +EA+E ME+ + + ILG C +
Sbjct: 439 KYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENIKLDTENYNSLILGCCKSRRTDL 498
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
A F+ M+ +G + N Y L+ E+ + A+E+++E+
Sbjct: 499 ALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 25/233 (10%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ + + +Y ++ LC +V K L M R PN YN I +LC+
Sbjct: 331 EEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEE 389
Query: 130 GKVGRARSLMSDMEEPNDVT----FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G V A S++ + + + I+I + C++ N A LL + +GF PD T
Sbjct: 390 GMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTY 449
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ ++ LC G + +A+EI E +L + + YN LI
Sbjct: 450 SSLIRGLCMEGMLNEAIEIFSVMEENIKL--------------------DTENYNSLILG 489
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
C++ D ALDVF M G N TY L+ G+ +D ++L+ ++
Sbjct: 490 CCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQ 542
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 229/524 (43%), Gaps = 58/524 (11%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDY 82
+ M+ + D + + ++P +K N IL +L +D+ + M G++
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ C +V G LL M+ RG PN V YN LI+ L K G+ +A+ L+ +M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 143 EEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ + T++ LI Y + L AL L E+ G P V T + LC +GR+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 199 MDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
DA++ L + RLG + E+ P + TYN L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID-----------DGL 291
+ C G L+ A + +M +GI+ + VTY L+ G C G + +GL
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 292 KI------------LQLMEDSK----------EGSKGRISPYNSVLYGLYRENQQDEALE 329
++ L+L + S+ +G + YN V+ GL + +EA E
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 535
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L++M + + P V + I +G + + F +M+ +G P+VV Y LIH +
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ R+ A EM G LP T+N++++GLC+ + A E + +G P
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE---MVEKGIFP 652
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI C G +Q A L QM+ +G+ PD T ++LL
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 176/390 (45%), Gaps = 52/390 (13%)
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+LI Y K+ + L + +K PDV ++L +L + AVE+ GE
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + GKV+ G L EM+R+GC PN TYN+LI+ + G + A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ +M G+ + TY+ LI G + G + + L + + M +G+ ++ YNS +
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM--VLKGASPTVATYNSFI 346
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
YGL + + +A++ L M L P V + I G+C GN+ A FD++
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P +V Y+ L+ C++ + A +L EM G P T+ +++G C+ G++ A +
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 434 VEEDMRG--------------------------------IGRGSLPGSGHYSPLIKALCE 461
+E + + +G P Y+ ++ LC+
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCK 526
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + AS LL +MV G++PDY+T+ S++
Sbjct: 527 LGNLEEASELLQKMVSDGVIPDYVTYTSII 556
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 30/352 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G R + D + + P++ +N++LD L ++ ++++A+
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D TY IL+ G C + + M G++ +S Y T I
Sbjct: 432 -KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G RA SL +M P+ + +++++ CK NL A LL+K S G +PD V
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550
Query: 184 TITKVLELLCSVGRVMDAVEILEE-----------------SGEQGRLGKVKGGCRFLKE 226
T T ++ GR+ EI E G G+ G+++ + E
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGK-GRLERAFIYFSE 609
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M+ KG LPNV TYN LI+ C+ +D A + F +M GI N +Y LI C+ G
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
+ L + + M D +G + P + L ++ +D L+ ++Q+E L
Sbjct: 670 WQEALSLYKQMLD-----RG-VQPDSCTHSALLKQLGKDCKLQAVRQLESLL 715
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 229/524 (43%), Gaps = 58/524 (11%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDY 82
+ M+ + D + + ++P +K N IL +L +D+ + M G++
Sbjct: 176 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 235
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ C +V G LL M+ RG PN V YN LI+ L K G+ +A+ L+ +M
Sbjct: 236 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 295
Query: 143 EEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ + T++ LI Y + L AL L E+ G P V T + LC +GR+
Sbjct: 296 LKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 355
Query: 199 MDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
DA++ L + RLG + E+ P + TYN L
Sbjct: 356 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 415
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID-----------DGL 291
+ C G L+ A + +M +GI+ + VTY L+ G C G + +GL
Sbjct: 416 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 475
Query: 292 KI------------LQLMEDSK----------EGSKGRISPYNSVLYGLYRENQQDEALE 329
++ L+L + S+ +G + YN V+ GL + +EA E
Sbjct: 476 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 535
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L++M + + P V + I +G + + F +M+ +G P+VV Y LIH +
Sbjct: 536 LLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHA 595
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ R+ A EM G LP T+N++++GLC+ + A E + +G P
Sbjct: 596 GKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAE---MVEKGIFP 652
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI C G +Q A L QM+ +G+ PD T ++LL
Sbjct: 653 NKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 180/392 (45%), Gaps = 56/392 (14%)
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+LI Y K+ + L + +K PDV ++L +L + AVE+ GE
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + GKV+ G L EM+R+GC PN TYN+LI+ + G + A
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQA 288
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ +M G+ + TY+ LI G + G + + L + + M +G+ ++ YNS +
Sbjct: 289 KGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM--VLKGASPTVATYNSFI 346
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
YGL + + +A++ L M L P V + I G+C GN+ A FD++
Sbjct: 347 YGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 406
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA--- 430
P +V Y+ L+ C++ + A +L EM G P T+ +++G C+ G++ A
Sbjct: 407 PTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEF 466
Query: 431 -----------------------LKL--------VEEDMRGIGRGSLPGSGHYSPLIKAL 459
LKL ++E+M + +G P Y+ ++ L
Sbjct: 467 FDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEM--LAKGFPPDLIIYNVVVDGL 524
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+ G + AS LL +MV G++PDY+T+ S++
Sbjct: 525 CKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 24/313 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G R + D + + P++ +N++LD L ++ ++++A+
Sbjct: 372 PDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D TY IL+ G C + + M G++ +S Y T I
Sbjct: 432 -KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL 490
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G RA SL +M P+ + +++++ CK NL A LL+K S G +PD V
Sbjct: 491 KLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYV 550
Query: 184 TITKVLELLCSVGRVMDAVEILEE-----------------SGEQGRLGKVKGGCRFLKE 226
T T ++ GR+ EI E G G+ G+++ + E
Sbjct: 551 TYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGK-GRLERAFIYFSE 609
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M+ KG LPNV TYN LI+ C+ +D A + F +M GI N +Y LI C+ G
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 287 IDDGLKILQLMED 299
+ L + + M D
Sbjct: 670 WQEALSLYKQMLD 682
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 9 PDESIFITVIRG-LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P + +I G G+ R+ + +++ + + P++ +NS+++ L K +D A
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK-GILPNVITYNSLINGLCKVRRMDQAYN 640
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+ +M+ G+ + Y+Y IL+ C + L M RGV+P+S ++ L+ L
Sbjct: 641 FF-AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Query: 127 CKNGKV 132
K+ K+
Sbjct: 700 GKDCKL 705
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 215/471 (45%), Gaps = 68/471 (14%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSL 126
++M G + ++Y IL+KGLC NR + +LLH+M + G P+ V Y T+I+
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A S +M + P+ VT++ +I A CK + + A+ +L G +PD
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T +L CS G+ +A+ FLK+M G P+V TY++L
Sbjct: 267 MTYNSILHGYCSSGQPKEAIG-------------------FLKKMRSDGVEPDVVTYSLL 307
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ C+ G A +F+ M G+ TY TL++G + G + + +L LM +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRN 365
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G ++ ++ + + D+A+ +M + L P AV I C G VEDA
Sbjct: 366 GIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIH-----------------------------------A 385
F+QMI+EG P ++Y+ LIH +
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+C+E RV E+ +L + M G P T+NT+++G C G + A+KL+ + G
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG---MVSVGL 542
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
P + YS LI C+ + A +L +M G+ PD +T+N +L L Q
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/541 (24%), Positives = 222/541 (41%), Gaps = 103/541 (19%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
SPPD + TVI G + + + + P + +NSI+ L K + +D A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M+ +GV D TY ++ G C + + + L M+S GV+P+ V Y+ L+
Sbjct: 252 EVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 126 LCKNGKVGRARSLMSDMEE---------------------------------------PN 146
LCKNG+ AR + M + P+
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
FSILICAY + + A+++ K G P+ VT V+ +LC GRV DA+ E
Sbjct: 371 HYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 207 ESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ ++G K + + EM +G N +N +I S+C+ G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ + +F M G+ N +TY+TLI G C G++D+ +K+L M G K
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM--VSVGLKPNTVT 548
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
Y++++ G + ++ ++AL K+ME
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEMES---------------------------------S 575
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G P+++ Y+ ++ Q R A EL +T G ST+N +L GLC+ A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Query: 431 LKLVEE----DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
L++ + D++ R ++ +I AL + G A L V G++P+Y T
Sbjct: 636 LQMFQNLCLMDLKLEAR-------TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 487 W 487
+
Sbjct: 689 Y 689
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 211/527 (40%), Gaps = 105/527 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I L +A+ ++ ++ + + + + P +NSIL +
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM + GV+ D TY++LM LC R + K+ M RG+KP Y TL+
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + L+ M P+ FSILICAY + + A+++ K G P+ VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------------------------------- 212
V+ +LC GRV DA+ E+ ++G
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 213 -------------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ G+V + + M R G PNV TYN LI+ YC G +D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------------- 300
A+ + + M G+ N VTY TLI G C R++D L + + ME S
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 301 --------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------ 334
+ G++ +S YN +L+GL + D+AL+ + +
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ F +D LK+ G ++AK F G VPN Y + + +
Sbjct: 649 LEARTFNIMIDALLKV------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV---GTALKLVEE 436
E +L M +G + N ++ L ++G + GT L +++E
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 185/396 (46%), Gaps = 28/396 (7%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNAL 167
V P+ Y LI C+ G++ + + ++ + + + F+ L+ C ++ +A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 168 -VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
++L + G +P+V + +L+ LC R +A+E+L + +GG
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD------RGG------ 190
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
G P+V +Y +I+ + + G D A +++M GI + VTY+++I LC
Sbjct: 191 ----GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+D +++L M K G YNS+L+G Q EA+ +LK+M + + P V
Sbjct: 247 MDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL + C +G +A++ FD M + G P + Y L+ Y + + E L+ M
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G P F+ ++ QG V A+ LV MR +G P + Y +I LC+ G
Sbjct: 365 NGIHPDHYVFSILICAYANQGKVDQAM-LVFSKMRQ--QGLNPNAVTYGAVIGILCKSGR 421
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ A + QM+ +G+ P + +NSL+ L W
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 200/496 (40%), Gaps = 100/496 (20%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A V D TY IL+ C R+ GF L + +G + +++ + L+ LC + +
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139
Query: 134 RARSL-MSDMEE----PNDVTFSILICAYCKEENLVNALVLLE---KSFSFGFVPDVVTI 185
A + + M E PN +++IL+ C E AL LL G PDVV+
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T V+ G A E M +G LP+V TYN +I++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHE-------------------MLDRGILPDVVTYNSIIAA 240
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED------ 299
C+ +D A++V N M +G+ + +TY++++ G CS G+ + + L+ M
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 300 ---------------------------SKEGSKGRISPYNSVLYG--------------- 317
+K G K I+ Y ++L G
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 318 --------------------LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ + D+A+ +M + L P AV I C G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
VEDA F+QMI+EG P ++Y+ LIH C + A EL+ EM G FN
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ C++G V + KL E +R G P Y+ LI C G A LL M
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVR---IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 476 VGKGILPDYLTWNSLL 491
V G+ P+ +T+++L+
Sbjct: 538 VSVGLKPNTVTYSTLI 553
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL-MKEMTGHGY 407
LGF GNV I++G + + + L+ C ++R +A ++ ++ MT G
Sbjct: 105 LGFAALGNV----------IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P ++N +L GLC + AL+L+ G GS P Y+ +I ++G
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEMV 510
A +M+ +GILPD +T+NS++ L + Q + +LN MV
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ P+ + T+I G + + D + + ++P + +N IL L +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A ++ SG Q + TY I++ GLC D ++ + +K + +N +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 124 HSLCKNGKVGRARSLM----SDMEEPNDVTFSIL 153
+L K G+ A+ L S+ PN T+ ++
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 210/445 (47%), Gaps = 29/445 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M GV+ + TY + GLC +V + L ++ RG NS +N +IH C +G
Sbjct: 238 EMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDG 297
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V +A + M++ P+ ++SIL+ CK+ +++ +L + G P++V+ +
Sbjct: 298 QVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYS 357
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRFL---------KEMERK 230
+L LC GRV A E+ + +QG + G C+ L +M
Sbjct: 358 SLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH 417
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
+P+ Y+ LI +YC L AL+VF M DGI N VT L+ G + G I G
Sbjct: 418 NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLI--G 475
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
L L + + G + Y ++ GL + N+ ++ M K P V S+ I
Sbjct: 476 EAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIII 535
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF ++++A R + +M++EG PN+ Y LI+ C ++++ E L K M G G
Sbjct: 536 DGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLT 595
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P + ++++ C++ N+ AL++ E + G+ S Y+ LI +
Sbjct: 596 PDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFV----YTCLIGGFSKVLAMDG 651
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLI 492
A + + +M+ KG+ P +T+ L+I
Sbjct: 652 AQLFMEEMMNKGLTPTVVTYTDLII 676
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 191/430 (44%), Gaps = 27/430 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + F VI G ++ V+ D + + P + ++ ++D L K+ L +
Sbjct: 280 PCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYY 339
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +G+ + +Y+ L+ GLC RV F+L +K +G K + ++Y+ ++H C
Sbjct: 340 MLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCC 399
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++ + L +DM P+ +S LI AYC+ L AL + E G P+VV
Sbjct: 400 QHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVV 459
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ + G + +A FL ++ + G +PN+ TY ++I
Sbjct: 460 TCTILVHGFSNEGLIGEAF-------------------LFLDKVRQFGVVPNLCTYRVII 500
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ + +F DM G + V Y +I G + + ++ M D EG
Sbjct: 501 NGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD--EG 558
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+K I Y S++ GL +++ E + K M E L P + + I +C N++ A
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAAL 618
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M EG + +Y CLI + + + A M+EM G P T+ ++ G
Sbjct: 619 EIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGY 678
Query: 422 CRQGNVGTAL 431
+ G+ A+
Sbjct: 679 FKIGDEKKAM 688
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 138/311 (44%), Gaps = 15/311 (4%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETG--VLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+M+ G PN+ +Y++L+S Y L+ A ++ ++M+++G+ N TY T + G
Sbjct: 198 LFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEGVRPNAATYGTYLYG 257
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
LC ++ LQ++ + G +N+V++G + Q +A+E M+K
Sbjct: 258 LCRAKQVKSAWNFLQML--CQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFV 315
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P S+ + G C G+V +M G PN+V Y L+H C+ RV A EL
Sbjct: 316 PDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFEL 375
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
K + G+ ++ VL G C+ ++ L DM + +P + +YS LI A
Sbjct: 376 FKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDL-WNDM--VHHNFVPDAYNYSSLIYA 432
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHE 518
C + A + M+ GI P+ +T L+ S + L+ E F+ V +
Sbjct: 433 YCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEG------LIGEAFLFLDKVRQ 486
Query: 519 LSAKEKRCKLR 529
C R
Sbjct: 487 FGVVPNLCTYR 497
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 135/341 (39%), Gaps = 77/341 (22%)
Query: 223 FLKEMERKGCLPNVDTY-----------------------------------NILISSYC 247
L EME +G PN TY N +I +C
Sbjct: 235 LLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFC 294
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A++VF+ MK G + +Y L+ GLC G + G + L+E ++ G
Sbjct: 295 HDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYM--LVEMARNGITPN 352
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQME-------------------------------- 335
+ Y+S+L+GL R + + A E K+++
Sbjct: 353 LVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWN 412
Query: 336 -----KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
P A + S I +C +++A F+ MI +G PNVV L+H + E
Sbjct: 413 DMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEG 472
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EA + ++ G +P T+ +++GLC+ + DM I RG +P +
Sbjct: 473 LIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIF-ADM--IKRGYVPDTV 529
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS +I + Q A L +MV +G P+ T+ SL+
Sbjct: 530 LYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLI 570
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 119/280 (42%), Gaps = 20/280 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I R R + + ++ +L+ + P++ ++ E + +
Sbjct: 421 PDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLF 480
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+ GV + TY +++ GLC N+ D + + M RG P++V+Y+ +I K
Sbjct: 481 LDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVK 540
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L M +PN T++ LI C ++ L + L + G PD +
Sbjct: 541 ALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRIL 600
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T ++ C + A+EI E +G ++ + G F++EM
Sbjct: 601 YTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMM 660
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
KG P V TY LI Y + G A+ ++N M GI+
Sbjct: 661 NKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIA 700
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 43/214 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P+ + +I GL + NDV D++ R P +++ I+D VK +DL AF
Sbjct: 491 PNLCTYRVIINGLCKVNKPNDVWGIFADMIKR-GYVPDTVLYSIIIDGFVKA-LDLQEAF 548
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
KM+ G + + +TY L+ GLC +++ + L M G+ P+ ++Y +LI
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACY 608
Query: 127 CKNGKVGRARSLMSDMEE---------------------------------------PND 147
CK + A + +ME P
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTV 668
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
VT++ LI Y K + A+V+ G PD
Sbjct: 669 VTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPD 702
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 208/460 (45%), Gaps = 40/460 (8%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK-LLHVMKSRGVKPNSVIYN 120
DL AF+ +++ +G++ +K LC R + LLH M G PN++ YN
Sbjct: 173 DLGPAFF-ARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYN 231
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSF 174
T+I SLC + + A ++ M + P+ V+F+ +I + K+ + A L+ +
Sbjct: 232 TVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMV 291
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQGR----------------LGKV 217
G PDVVT +++ LC R MD E +L + ++G G
Sbjct: 292 QKGVEPDVVTYNSIVDALCK-ARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHW 350
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
K + ++M KG +P + T+N +SS C+ G A ++F M G + V+Y L
Sbjct: 351 KESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSIL 410
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
+ G + GR D + M D +G +N ++ + DEA+ +M +
Sbjct: 411 LHGYATEGRFADMNNLFHSMAD--KGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ 468
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P V S I FC G + DA F QMI G PN V+Y LIH +C + +A
Sbjct: 469 GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528
Query: 396 SELMKEMTGHGY-LPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGH 451
EL+ EM G P F++++ LC +G V A LV I G P
Sbjct: 529 KELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV------IHIGDRPTIVT 582
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ LI C G + A +L MV GI PD +T+N+L+
Sbjct: 583 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLV 622
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 198/435 (45%), Gaps = 28/435 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA---- 135
D ++ ++ G V L++ M +GV+P+ V YN+++ +LCK + +A
Sbjct: 263 DVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVL 322
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
R ++ EP+ +T++ +I Y + + + K S G +P +VT + LC
Sbjct: 323 RQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKH 382
Query: 196 GRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTY 239
GR DA EI + +G + G+ M KG + N +
Sbjct: 383 GRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCF 442
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
NILIS++ + G++D A+ VF +M+ G+ + VTY TLI C GR+ D ++ M
Sbjct: 443 NILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQM-- 500
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRA--VDRSLKILGFCVDGN 356
G + Y+S+++G +A E + +M K PR V S I C +G
Sbjct: 501 ISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGR 560
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V DA F+ +I G P +V ++ LI YC ++ +A ++ M G P T+NT
Sbjct: 561 VMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNT 620
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++SG C+ G + L L E + + P + YS ++ L G +A + +M+
Sbjct: 621 LVSGYCKSGKIDDGLILFREMLH---KKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMI 677
Query: 477 GKGILPDYLTWNSLL 491
G D T+ LL
Sbjct: 678 DSGTAVDIDTYKILL 692
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 169/370 (45%), Gaps = 34/370 (9%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M GV+ D TY+ L+ C R+ D + M S G++PN+V+Y++LIH C +G
Sbjct: 464 EMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG 523
Query: 131 KVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ +A+ L+S+M PN V FS +I + C E +++A + G P +VT
Sbjct: 524 DLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTF 583
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ C VG++ A +L+ M G P+V TYN L+S
Sbjct: 584 NSLIDGYCLVGKMEKAFGVLD-------------------AMVSVGIEPDVVTYNTLVSG 624
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC++G +D L +F +M + VTY ++ GL GR K+ M DS G+
Sbjct: 625 YCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS--GTA 682
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG-----NVEDA 360
I Y +L GL R + DEA+ KL + IL ++ E+A
Sbjct: 683 VDIDTYKILLKGLCRNDLTDEAITLF---HKLGAMDCKFDITILNTVINALYKVRRREEA 739
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + G VPNV Y +IH +E V EA + M G P + N ++
Sbjct: 740 NDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 799
Query: 421 LCRQGNVGTA 430
L ++G++ A
Sbjct: 800 LLQKGDIVKA 809
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 209/465 (44%), Gaps = 41/465 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
PD F TVI G + +V KA +L++ + P + +NSI+D L K +D A
Sbjct: 262 PDVVSFNTVIHGFFKQ---GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKA 318
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R+ M+ GV+ D TY ++ G + + K+ M S+G+ P V +N+ +
Sbjct: 319 ELVLRQ-MVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMS 377
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLCK+G+ A + M P+ V++SIL+ Y E + L G V
Sbjct: 378 SLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVA 437
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ ++ G + +A+ + EM+ +G P+V TY+
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLV-------------------FTEMQGQGVRPDVVTYS 478
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED- 299
LIS++C G L A++ F+ M G+ N V Y +LI G C G D +K +L+ +
Sbjct: 479 TLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG---DLVKAKELVSEM 535
Query: 300 -SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGN 356
SK + I ++S+++ L E + +A + + + P V + I G+C+ G
Sbjct: 536 MSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 595
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A D M+ G P+VV Y+ L+ YC+ ++ + L +EM P T++
Sbjct: 596 MEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSI 655
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
VL GL G A K+ E I G+ Y L+K LC
Sbjct: 656 VLDGLFHAGRTSAAKKMFHE---MIDSGTAVDIDTYKILLKGLCR 697
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 219/523 (41%), Gaps = 40/523 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G + + K ++ + P + FNS + L K
Sbjct: 332 PDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEI 391
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M G D +Y+IL+ G R D L H M +G+ N +N LI + K
Sbjct: 392 FQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAK 451
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A + ++M+ P+ VT+S LI A+C+ L +A+ + S G P+ V
Sbjct: 452 RGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVV 511
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFLKEM 227
++ C G ++ A E++ E +G G+V +
Sbjct: 512 YHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV 571
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P + T+N LI YC G ++ A V + M GI + VTY+TL+ G C G+I
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DDGL + + M K K Y+ VL GL+ + A + +M + K
Sbjct: 632 DDGLILFREMLHKK--VKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYK 689
Query: 348 IL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
IL G C + ++A F ++ ++ I + +I+A + R EA++L ++
Sbjct: 690 ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTS 749
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G +P ST+ ++ L ++G+V A + + G P S + +I+ L +KG
Sbjct: 750 GLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKS---GCAPSSRLLNDIIRMLLQKGDI 806
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
A + ++ G +I L TT LL+ L +
Sbjct: 807 VKAGYYMSKVDGT------------IISLEASTTSLLMSLFSS 837
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V TY IL+ C D F + G+ + +T ++ LC R D+ + +L
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----LFPRAVDRSLKILG 350
L S G YN+V+ L +++ EAL+ +++M K P V + I G
Sbjct: 215 -LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 273
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F G V A ++M+++G P+VV Y+ ++ A C+ + +A ++++M G P
Sbjct: 274 FFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ ++ G G+ + K+ + +G +PG ++ + +LC+ G + A
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFR---KMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE 390
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+ M KG +PD ++++ LL
Sbjct: 391 IFQYMTTKGHMPDLVSYSILL 411
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 214/438 (48%), Gaps = 33/438 (7%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDL F+R+ M+ SGV+ Y+ I+++GLC V KL+ +G+KP + YN
Sbjct: 186 IDLCLEFFRR-MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYN 244
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T+I++ K+ ++ M++ N VT+++LI K + + L ++
Sbjct: 245 TIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRER 304
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G D+ T ++ C R G +K E+ KG LP+
Sbjct: 305 GIESDIHVYTSLISWNC-------------------RKGNIKRAFLLFDELTEKGLLPSS 345
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI C+ G + +A + N+M+ G++ V ++TLI G C G ID+ I +
Sbjct: 346 HTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDV 405
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSLKILGFCVD 354
ME K+G + + N++ R + DEA ++L +M + R V + I +C +
Sbjct: 406 ME--KKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKE 463
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GNVE+AKR F +M + PN + Y+ +I+AYC++ +V+EA +L M +G P + T+
Sbjct: 464 GNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTY 523
Query: 415 NTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+++ G C NV A++L E ++G+ + S+ Y+ +I L + G A L
Sbjct: 524 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT----YTVMISGLSKAGKSDEAFGLYD 579
Query: 474 QMVGKGILPDYLTWNSLL 491
++ KG D + +L+
Sbjct: 580 EIKRKGYTIDNKVYTALI 597
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 7/287 (2%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R G+V+ + +KE KG P TYN +I++Y + + MK DG+ +N V
Sbjct: 217 RRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKV 276
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY LI G+++D K+ M + G + I Y S++ R+ A
Sbjct: 277 TYTLLIELSVKNGKMNDVEKLFDEMRE--RGIESDIHVYTSLISWNCRKGNIKRAFLLFD 334
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++ + L P + I G C G + A+ ++M +G V+++ LI+ YC++
Sbjct: 335 ELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKG 394
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EAS + M G+ T NT+ S R A + + M G G +
Sbjct: 395 MIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG---GVRLSTV 451
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI C++G + A L V+M K + P+ +T+N ++ +Q
Sbjct: 452 SYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQ 498
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 139/308 (45%), Gaps = 29/308 (9%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR-KKMMASGVQGDDYTYA 85
+NDV K D + + + ++ S++ ++ ++ RAF ++ G+ +TY
Sbjct: 291 MNDVEKLFDEMRERGIESDIHVYTSLISWNCRKG-NIKRAFLLFDELTEKGLLPSSHTYG 349
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP 145
L+ G+C +G L++ M+S+GV V++NTLI+ C+ G + A S++ D+ E
Sbjct: 350 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEA-SMIYDVMEK 408
Query: 146 NDVTFSILIC---AYC--KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ C A C + + A L + G V+ T ++++ C G V +
Sbjct: 409 KGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEE 468
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A R EM K PN TYN++I +YC+ G + A ++
Sbjct: 469 AK-------------------RLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWA 509
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+MK +G+ + TY +LI G C +D+ +++ M +G Y ++ GL +
Sbjct: 510 NMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM--GLKGLDQNSVTYTVMISGLSK 567
Query: 321 ENQQDEAL 328
+ DEA
Sbjct: 568 AGKSDEAF 575
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 50/311 (16%)
Query: 239 YNILISSYCETGVLDSALDVFNDM-----------------------KID---------- 265
++++ Y + G+ + L VF+ M +ID
Sbjct: 138 FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMV 197
Query: 266 --GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ + ++ GLC G ++ K+++ E S +G K YN+++ +
Sbjct: 198 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIK--EFSGKGIKPEAYTYNTIINAYLKHRD 255
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ LK M+K + V +L I +G + D ++ FD+M E G ++ +Y
Sbjct: 256 FSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTS 315
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRG 440
LI C++ ++ A L E+T G LP + T+ ++ G+C+ G +G A L+ E +G
Sbjct: 316 LISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKG 375
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS----- 495
+ + ++ LI C KG ASM+ M KG D T N++ C +
Sbjct: 376 VNITQVV----FNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRY 431
Query: 496 -QQTTWLLLLL 505
+ WL ++
Sbjct: 432 DEAKQWLFRMM 442
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKK 71
+F T+I G R MI++ D++ + + N+I + + D A+ + +
Sbjct: 382 VFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR- 440
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
MM GV+ +Y L+ C V + +L M S+ V+PN++ YN +I++ CK GK
Sbjct: 441 MMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGK 500
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V AR L ++M+ +P+ T++ LI C +N+ A+ L + G + VT T
Sbjct: 501 VKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 560
Query: 188 VLELLCSVGRVMDAVEILEESGEQG 212
++ L G+ +A + +E +G
Sbjct: 561 MISGLSKAGKSDEAFGLYDEIKRKG 585
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 222/504 (44%), Gaps = 61/504 (12%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ND + + + + R P + F IL LVK ++M G+Q + T I
Sbjct: 30 LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS----LMSDM 142
L+ C ++ F + + G +P+ + Y TLI LC NG+V + + L+S
Sbjct: 90 LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+ + V++ LI CK AL LL K PDVV +++ LC V DA
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++ C EM K PNV TY LI +C G LD A + N+M
Sbjct: 210 DLY---------------C----EMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEM 250
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-------------------KEG 303
+ ++ N T++TL+ GLC G++ + ++ +M KE
Sbjct: 251 VLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEA 310
Query: 304 SKGR--------------ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
K + + Y+ ++ GL + DEA++ + M E + P V S
Sbjct: 311 GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSL 370
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C G + A + D+M + G PNV+ Y LI A C+ +V +A L+K++ G
Sbjct: 371 IDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGI 430
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+N ++ GLC+ G + A K+ ++ + +G YS +I LC++ F
Sbjct: 431 QANMYTYNILVDGLCKDGRLTDAQKVFQDLLM---KGHNVDVVTYSIMINGLCKESLFDE 487
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL +M KG +PD + + +++
Sbjct: 488 ALTLLSKMEDKGCVPDAIAYETII 511
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/464 (26%), Positives = 220/464 (47%), Gaps = 42/464 (9%)
Query: 3 HSIQSPPDESIFITV---IRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL--- 56
H IQS +IT+ I R IN + + P + + +++ L
Sbjct: 78 HGIQSN-----YITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLN 132
Query: 57 --VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
VKE ++ + ++++ G++ D +Y L+ GLC + G +LL ++ +P
Sbjct: 133 GQVKESLN-----FHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRP 187
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLL 170
+ V+YNT+I LCK+ V A L +M E PN VT++ LI +C L A LL
Sbjct: 188 DVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLL 247
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------RLGKVKGGCRFL 224
+ P+V T +++ LC G++ +A ++ ++G + G +
Sbjct: 248 NEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLV 307
Query: 225 KE----------MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
KE M + G +V +Y+++IS + +LD A+D+F M+ + + + V Y
Sbjct: 308 KEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAY 367
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+LI GLC GRI+ LK + M D G + Y S++ L + +Q D+A+ LK++
Sbjct: 368 SSLIDGLCKSGRINSALKYVDEMHD--RGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425
Query: 335 EKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ +A + IL G C DG + DA++ F ++ +G +VV Y +I+ C+E
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
EA L+ +M G +P A + T+++ + A KL+ E
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLRE 529
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 27/297 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
P+ F T++ GL + + + ++ + + P + +N+++D LVKE
Sbjct: 257 PNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNV 316
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F M GV D ++Y++++ GL + + L M++ V P+ V Y++LI L
Sbjct: 317 F--NIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGL 374
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+G++ A + +M + PN +T++ LI A CK + A+ LL+K G ++
Sbjct: 375 CKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANM 434
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T +++ LC GR+ DA ++ ++ + KG +V TY+I+
Sbjct: 435 YTYNILVDGLCKDGRLTDAQKVFQD-------------------LLMKGHNVDVVTYSIM 475
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
I+ C+ + D AL + + M+ G + + Y+T+I D K+L+ M D
Sbjct: 476 INGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-- 60
H PP+ + ++I L ++ ++ + + + ++ +N ++D L K+
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
D + F + ++ G D TY+I++ GLC + + LL M+ +G P+++ Y
Sbjct: 451 TDAQKVF--QDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYE 508
Query: 121 TLIHSLCKNGKVGRARSLMSDM 142
T+I++ + +A L+ +M
Sbjct: 509 TIINAFFEKDMNDKAEKLLREM 530
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+ DA F++M+ P ++ + ++ + + + L + M HG T N
Sbjct: 29 NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ C + +A + + ++ G P Y+ LI+ LC G + + ++
Sbjct: 89 ILINSYCHLRQINSAFSVFAKILK---LGYQPDIITYTTLIRGLCLNGQVKESLNFHDRL 145
Query: 476 VGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
V +GI D++++ +L+ +C QT L LL
Sbjct: 146 VSQGIKLDHVSYGTLINGLCKIGQTGPALRLL 177
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 218/454 (48%), Gaps = 37/454 (8%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ NS+L+ + +M+ G Q D T+ L+ GL N+ + L
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ M +G +P+ V Y +I+ LCK G+ A +L++ ME E + V ++ +I CK
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+++ +A L K + G PDV T ++ LC+ GR DA
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA------------------ 304
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLI 278
R L +M K P++ +N LI ++ + G L A ++++M K + V Y+TLI
Sbjct: 305 -SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
+G C R+++G+++ + M S+ G G Y ++++G ++ D A KQM +
Sbjct: 364 KGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + ++ + G C +GNVE A F+ M + ++V Y +I A C+ +V +
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL---VEEDMRGIGRGSLPGSGHYS 453
+L ++ G P T+ T++SG CR+G A L ++ED G LP SG Y+
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED------GPLPNSGTYN 535
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
LI+A G +++ L+ +M G D T+
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 211/460 (45%), Gaps = 41/460 (8%)
Query: 44 PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ F+ +L + K + DL + ++M G+ + YTY+I + C +++
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISL-GEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+L M G P+ V N+L++ C ++ A +L+ M E P+ VTF+ L+
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ A+ L+E+ G PD+VT V+ LC G A+ +L +
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK----------- 240
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME+ +V YN +I C+ +D A D+FN M+ GI + TY+ LI
Sbjct: 241 --------MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM 334
LC+ GR D ++L M + I+P +N+++ +E + EA + +M
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKN------INPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 335 EK---LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
K FP V + I GFC VE+ F +M + G V N V Y LIH + Q
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
A + K+M G P T+N +L GLC GNV TAL + E + R
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK---RDMKLDIVT 463
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +I+ALC+ G + L + KG+ P+ +T+ +++
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 201/421 (47%), Gaps = 30/421 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T++ GL + ++ V + + P L + ++++ L K + DLA
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM ++ D Y ++ GLC + D F L + M+++G+KP+ YN LI LC
Sbjct: 238 L-NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF-SFGFVPDV 182
G+ A L+SDM E P+ V F+ LI A+ KE LV A L ++ S PDV
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V +++ C RV + +E+ +EM ++G + N TY L
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVF-------------------REMSQRGLVGNTVTYTTL 397
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + + D+A VF M DG+ + +TY+ L+ GLC+ G ++ L + + M+ K
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ--KR 455
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
K I Y +++ L + + ++ + ++ + P V + + GFC G E+A
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F +M E+G +PN Y+ LI A ++ ++EL+KEM G+ ASTF V +
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Query: 421 L 421
L
Sbjct: 576 L 576
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 190/433 (43%), Gaps = 27/433 (6%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
+++ G I++ V D + P F +++ L + + ++M+
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Q D TY ++ GLC LL+ M+ ++ + VIYNT+I LCK + A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L + ME +P+ T++ LI C +A LL PD+V +++
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
G++++A ++ +E ++ K C P+V YN LI +C+
Sbjct: 330 FVKEGKLVEAEKLYDEM------------------VKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
++ ++VF +M G+ N VTY TLI G D+ + + M +G I Y
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM--VSDGVHPDIMTY 429
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N +L GL + AL + M+K + V + I C G VED F +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G PNVV Y ++ +C++ EA L EM G LP + T+NT++ R G+
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 430 ALKLVEEDMRGIG 442
+ +L++E MR G
Sbjct: 550 SAELIKE-MRSCG 561
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 34 TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+D++ + N+ P L FN+++D VKE + A Y + + + D Y L+KG C
Sbjct: 309 SDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL-----CKNGKVGRARSLMSDMEEPND 147
RV +G ++ M RG+ N+V Y TLIH C N ++ + ++SD P+
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM-VFKQMVSDGVHPDI 426
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+T++IL+ C N+ ALV+ E D+VT T ++E LC G+V D ++
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 208 SGEQGRLGKV-------KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGV 251
+G V G CR EM+ G LPN TYN LI + G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++ ++ +M+ G + + T+ L+ + GR+D
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLD 582
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+ +F DM + V + L+ + + D + + + M++ G + Y
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--GISHNLYTY 113
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+ + R +Q AL L +M KL P V + + GFC + +A DQM+E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+ V + L+H Q + EA L++ M G P T+ V++GLC++G
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L+ + +G + Y+ +I LC+ A L +M KGI PD T+N
Sbjct: 234 ALNLLNKMEKGKIEADVV---IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 490 LLICLSQQTTW 500
L+ CL W
Sbjct: 291 LISCLCNYGRW 301
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D ++DA F M++ P++V + L+ A + + L ++M G T
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ ++ CR+ + AL ++ + M+ +G G P + L+ C A L+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMK-LGYG--PSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 474 QMVGKGILPDYLTWNSLLICLSQQT 498
QMV G PD +T+ +L+ L Q
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHN 194
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 204/443 (46%), Gaps = 36/443 (8%)
Query: 26 MINDVVKATDL---VSRFN------MTPSLKIFNSILDVLV-KEDIDLARAFYRKKMMAS 75
MIN V++ L +S FN P FN++L +V + F+ + +
Sbjct: 100 MINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK- 158
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
V D Y++ I++KG C + F LL ++ G PN VIY TLI CK G++ +A
Sbjct: 159 -VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA 217
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ L +M + N+ T+++LI K + EK G P++ T V+
Sbjct: 218 KDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 192 LCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPN 235
C GR DA ++ +E E+G R K + + +M+ G PN
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TYN LI +C G L AL + D+K G+S + VTY+ L+ G C G K+++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVK 397
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCV 353
ME+ G K Y ++ R + ++A++ ME+L P S+ I GFC+
Sbjct: 398 EMEE--RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCI 455
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A R F M+ + PN VIY+ ++ YC+E A L +EM P ++
Sbjct: 456 KGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVAS 515
Query: 414 FNTVLSGLCRQGNVGTALKLVEE 436
+ ++ LC++ A LVE+
Sbjct: 516 YRYMIEVLCKERKSKEAEGLVEK 538
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 181/416 (43%), Gaps = 64/416 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
P+ I+ T+I G + ++ KA DL + +F + + + ++ L K I
Sbjct: 196 PNVVIYTTLIDGCCKR---GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQG 252
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+KM GV + YTY +M C R D FKL M+ RGV N V YNTLI
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGG 312
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC+ K A +M M+ PN +T++ LI +C L AL L S G P
Sbjct: 313 LCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+VT ++ C + G G + +KEME +G P+ TY I
Sbjct: 373 LVTYNILVSGFC-------------------KKGDTSGAGKVVKEMEERGIKPSKITYTI 413
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI ++ ++ A+ + + M+ G++ + TY LI G C G++++ ++ +LM K
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ P N V+Y + +LG+C +G+ A
Sbjct: 474 ------LEP-NKVIY----------------------------NTMVLGYCKEGSSYRAL 498
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
R F +M E+ PNV Y +I C+E + +EA L+++M G P S N +
Sbjct: 499 RLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 199/456 (43%), Gaps = 63/456 (13%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +++ + + + M +G P S +N L+ + + + ++ +
Sbjct: 97 YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156
Query: 144 EPNDV---TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
D+ +F I+I C+ + + LL + FGF P+VV T +++ C G +
Sbjct: 157 IKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEK 216
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A ++ E G+ G + G K G ++M+ G PN+ TYN +++
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ G A +F++M+ G+S N VTY+TLI GLC + ++ K++ M+ +G
Sbjct: 277 QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS--DGI 334
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG------- 355
+ YN+++ G + +AL + ++ L P V ++ + GFC G
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394
Query: 356 ----------------------------NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
N+E A + M E G P+V Y LIH +C
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ ++ EAS L K M P +NT++ G C++G+ AL+L E + LP
Sbjct: 455 IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFRE----MEEKELP 510
Query: 448 GS-GHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ Y +I+ LC++ + A L+ +M+ GI P
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 27/354 (7%)
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
S+ E + ++I AY + ++L +++ + GFVP +L + VG
Sbjct: 87 SETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFV--VGS-- 142
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
RF E + K L +V ++ I+I CE G ++ + D+
Sbjct: 143 ---------------SSFNQWWRFFNESKIKVDL-DVYSFGIVIKGCCEAGEIEKSFDLL 186
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+++ G S N V Y TLI G C G I+ + E K G Y +++GL+
Sbjct: 187 VELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF--FEMGKFGLVANEWTYTVLIHGLF 244
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ + + E ++M++ +FP + + C DG +DA + FD+M E G N+V
Sbjct: 245 KNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIV 304
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ LI C+E + EA+++M +M G P T+NT++ G C G +G AL L D
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC-RD 363
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ RG P Y+ L+ C+KG A ++ +M +GI P +T+ L+
Sbjct: 364 LK--SRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILI 415
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y+ +I+AY Q + + + EM G++P ++ FN +L+ + + + E
Sbjct: 96 LYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNES 155
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQ 496
+ + +IK CE G + + LLV++ G P+ + + +L+ C +
Sbjct: 156 KIKVDLDVYS----FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKR 211
Query: 497 QTTWLLLLLLNEMVSFVMVVHELS 520
L EM F +V +E +
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWT 235
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 212/442 (47%), Gaps = 38/442 (8%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
FYR +++ S ++ +Y ILM+G C +LL MKS GV+PN VI+ T+I L
Sbjct: 17 FYRHRLLGS-YAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGL 75
Query: 127 CKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C GKV +A R + D PN T+S L+ A CK A L+ + G P+V
Sbjct: 76 CTAGKVSQALLHFRRIGEDC-APNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNV 134
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ + R +D V +L LKEM ++GC +V TY ++
Sbjct: 135 VTYNALIDGFRKLER-LDEVLML------------------LKEMSQRGCRADVITYTMI 175
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS--GGRIDDGLKILQLMEDS 300
+ +C+ +D A + N ++ N VTY++L L + G R + L +L+ M
Sbjct: 176 LDIFCKNNSIDEAYRLLNALE----KRNVVTYNSLFTALSTAEGDRTTEALSLLEKM--I 229
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVE 358
+EG++ Y +VL L + ++ DEA + L M + D S KIL F G
Sbjct: 230 QEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTY 289
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
D+ +M+ G + + + +IH +C+ + EA +L K M G +P T+NT++
Sbjct: 290 DSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLI 349
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C+ TA+KL+ + ++ + P Y+ +IK+ C + + A + MV
Sbjct: 350 GAFCKAQQPDTAVKLLHQMIQADFK---PNVITYNSIIKSFCREQREEEARGIFQMMVDN 406
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
G PD +++ +L + ++ +
Sbjct: 407 GCFPDRVSYTTLKLSKNEAAIY 428
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 235/508 (46%), Gaps = 84/508 (16%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL------------------------- 104
++M G + ++Y IL+KGLC NR + +LL
Sbjct: 151 RRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFF 210
Query: 105 ------------HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
H M RG+ PN V YN++I +LCK + +A +++ M + PN
Sbjct: 211 KEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCR 270
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ ++ YC A+ L+K S G PDVVT +++ LC GR +A ++ +
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM 330
Query: 209 GEQGRLGKV------------KGGC----RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
++G ++ KG L M R G PN ++ILI +Y + G +
Sbjct: 331 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKV 390
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP-- 310
D A+ VF+ M+ G++ + VTY T+I LC GR++D ++ + M D R+SP
Sbjct: 391 DQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE------RLSPGN 444
Query: 311 --YNSVLYGLYRENQQDEALEYLKQM-------EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YNS+++ L ++ D+A E + +M + +F ++ I C +G V +++
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSI-----IDSHCKEGRVIESE 499
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ FD M+ G PN++ Y LI YC ++ EA++L+ M G P T+NT+++G
Sbjct: 500 KLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ + AL L E M G P Y+ +++ L + +A L V + G
Sbjct: 560 CKISRMEDALVLFRE-ME--SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616
Query: 482 PDYLTWNSLL--ICLSQQTTWLLLLLLN 507
+ T+N +L +C + T L + N
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQN 644
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 201/464 (43%), Gaps = 68/464 (14%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKL-LHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ G + D + L+KGLC R D + L M G PN YN L+ LC
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDEN 176
Query: 131 KVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L+ M + P+ V+++ +I + KE +L A + G +P+VVT
Sbjct: 177 RSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVT 236
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC + A+E+ L M + G +PN TYN ++
Sbjct: 237 YNSIIAALCKAQAMDKAMEV-------------------LTSMVKNGVMPNCRTYNSIVH 277
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC +G A+ M DG+ + VTY++L+ LC GR + K+ M +K G
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM--TKRGL 335
Query: 305 KGRISPYNSVLYG-----------------------------------LYRENQQDEALE 329
K I+ Y ++L G ++ + D+A+
Sbjct: 336 KPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAML 395
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+M + L P V I C G VEDA R F+QMI+E P ++Y+ LIH+ C
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
++ +A EL+ EM G FN+++ C++G V + KL + +R G P
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKP 512
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS LI C G A+ LL MV G+ PD +T+N+L+
Sbjct: 513 NIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/521 (24%), Positives = 212/521 (40%), Gaps = 93/521 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I L +A+ ++ ++ + + + P+ + +NSI+ +
Sbjct: 232 PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM + GV+ D TY LM LC R + K+ M RG+KP Y TL+
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + L+ M PN FSILICAY K+ + A+++ K G PD VT
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 185 ITKVLELLCSVGRVMD-----------------------------------AVEILEESG 209
V+ +LC GRV D A E++ E
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
++G + G+V + M R G PN+ TY+ LI YC G +D
Sbjct: 472 DRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMD 531
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------------- 300
A + M G+ + VTY+TLI G C R++D L + + ME S
Sbjct: 532 EATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Query: 301 --------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
+ G++ +S YN +L+GL + N DEAL + + +
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651
Query: 341 AVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
R+ I+ G ++AK F + G VP+V Y + ++ + E +L
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDL 711
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNV---GTALKLVEE 436
M +G + N+++ L ++G++ GT L +++E
Sbjct: 712 FLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDE 752
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 172/382 (45%), Gaps = 26/382 (6%)
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+D PN T+ ILI + C L L GF D + T +L+ LC+ R
Sbjct: 84 ADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 143
Query: 200 DAVEI-LEESGEQGRLGKV-------KGGC---------RFLKEMERKG--CLPNVDTYN 240
DA++I L + G + V KG C L+ M G C P+V +Y
Sbjct: 144 DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYT 203
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+I+ + + G LD A +++M GI N VTY+++I LC +D +++L M
Sbjct: 204 TVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSM--V 261
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
K G YNS+++G Q EA+ +LK+M + + P V + + C +G
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A++ FD M + G P + Y L+ Y + + E L+ M +G P F+ ++
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+QG V A+ LV MR +G P + Y +I LC+ G + A QM+ +
Sbjct: 382 CAYAKQGKVDQAM-LVFSKMR--QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
+ P + +NSL+ L W
Sbjct: 439 RLSPGNIVYNSLIHSLCIFDKW 460
>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 566
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 218/449 (48%), Gaps = 35/449 (7%)
Query: 59 EDIDLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+++ L AF+ + M G + D + L+ LC ++ K++ +M G+ P++
Sbjct: 74 KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
Y L+ SLC+ G VG A L+ MEE N VT++ L+ C NL +L LL++
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G VP+ T + +LE +E G + L E+ KG
Sbjct: 194 IQKGLVPNAYTYSFLLE------------AAYKERG-------ADEASKLLDEIIAKGGE 234
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN+ +YN+L++ C+ G + A+ +F ++ G S N V+Y+ L+R LC+ GR ++ +
Sbjct: 235 PNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVL 294
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
L M + E S ++ YN ++ L + + ALE L++M + P A + I
Sbjct: 295 LAEM-NGDERSPSTVT-YNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHL 352
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C DG ++ +C DQM+ PN Y+ I C+E V+EA +++ + +
Sbjct: 353 CKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQHSSTQ 411
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+ V++ LCR+GN A +L+ E + G P S YS LI+ LC +G A +
Sbjct: 412 EFYKIVITSLCRKGNTYPAFQLLYEMTK---YGFTPDSFTYSSLIRGLCMEGMLNEA-IE 467
Query: 472 LVQMVGKGILPDYLTWNSLLI--CLSQQT 498
+ ++ + PD +NSL++ C S++T
Sbjct: 468 IFSVMEENNKPDTENYNSLILGCCKSRRT 496
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 205/428 (47%), Gaps = 36/428 (8%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ SG+ D +Y L+ LC VG +L+ M+ G N+V YN+L+ LC +G
Sbjct: 123 MIGSGIIPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGN 182
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ ++ L+ + + PN T+S L+ A KE A LL++ + G P++V+
Sbjct: 183 LTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNV 242
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L LC GR DA+ R +E+ KG PNV +YNIL+ S C
Sbjct: 243 LLTGLCKEGRTEDAI-------------------RLFRELPSKGFSPNVVSYNILLRSLC 283
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A + +M D S + VTY+ LI L GR + L++L+ M ++ K
Sbjct: 284 NEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRAR--FKPT 341
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK-ILGFCVDGNVEDAKRCFDQ 366
S YN ++ L ++ + D ++ L QM + + I C +G V++A
Sbjct: 342 ASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQS 401
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
+ + Y +I + C++ A +L+ EMT +G+ P + T+++++ GLC +G
Sbjct: 402 LGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGM 461
Query: 427 VGTALKL---VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+ A+++ +EE+ + P + +Y+ LI C+ A + MVGKG LP+
Sbjct: 462 LNEAIEIFSVMEENNK-------PDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPN 514
Query: 484 YLTWNSLL 491
T+ L+
Sbjct: 515 ETTYTILV 522
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 181/388 (46%), Gaps = 26/388 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM G + TY L++GLC+ + +LL + +G+ PN+ Y+ L+ + K
Sbjct: 157 KMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKER 216
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A L+ ++ EPN V++++L+ CKE +A+ L + S GF P+VV+
Sbjct: 217 GADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYN 276
Query: 187 KVLELLCSVGRVMDAVEILEE-SGEQ------------GRL---GKVKGGCRFLKEMERK 230
+L LC+ GR +A +L E +G++ G L G+ + L+EM R
Sbjct: 277 ILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRA 336
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P +YN +I+ C+ G LD + + M + N TY+ I LC G + +
Sbjct: 337 RFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEA 395
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
I+Q + + + S Y V+ L R+ A + L +M K P + S I
Sbjct: 396 FSIIQSLGNKQHSSTQEF--YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLI 453
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C++G + +A F M EE P+ Y+ LI C+ R A ++ + M G GYL
Sbjct: 454 RGLCMEGMLNEAIEIFSVM-EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYL 512
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE 436
P +T+ ++ G+ + + A K++ E
Sbjct: 513 PNETTYTILVEGIIHEKEMDLATKVLRE 540
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 180/400 (45%), Gaps = 27/400 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + + +++RGL + ++ D + + + P+ ++ +L+ KE +
Sbjct: 164 PTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASK 223
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++A G + + +Y +L+ GLC R D +L + S+G PN V YN L+ SLC
Sbjct: 224 LLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLC 283
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+++M P+ VT++ILI + +AL +LE+ F P
Sbjct: 284 NEGRWEEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTAS 343
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ LC G++ V+ L++ M + C PN TYN I
Sbjct: 344 SYNPIIAHLCKDGKLDLVVKCLDQ-------------------MMYRHCNPNEGTYNA-I 383
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++ CE G++ A + + S Y +I LC G ++L M +K G
Sbjct: 384 ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLYEM--TKYG 441
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKR 362
Y+S++ GL E +EA+E ME+ P + + ILG C + A
Sbjct: 442 FTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENNKPDTENYNSLILGCCKSRRTDLALD 501
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
F+ M+ +G +PN Y L+ E+ + A+++++E+
Sbjct: 502 VFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLREL 541
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 129/333 (38%), Gaps = 68/333 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL + D ++ + +P++ +N +L L E +
Sbjct: 235 PNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEG-----RWE 289
Query: 69 RKKMMASGVQGDD-----YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++ + + GD+ TY IL+ L L R ++L M KP + YN +I
Sbjct: 290 EANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPII 349
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFS---------------------------- 151
LCK+GK+ + M PN+ T++
Sbjct: 350 AHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSS 409
Query: 152 ------ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
I+I + C++ N A LL + +GF PD T + ++ LC G + +A+EI
Sbjct: 410 TQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIF 469
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
E + P+ + YN LI C++ D ALDVF M
Sbjct: 470 SVMEENNK--------------------PDTENYNSLILGCCKSRRTDLALDVFEIMVGK 509
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
G N TY L+ G+ +D K+L+ ++
Sbjct: 510 GYLPNETTYTILVEGIIHEKEMDLATKVLRELQ 542
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 245/494 (49%), Gaps = 41/494 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLAR 65
P++ + +I G + ++ KA++L ++ + PS+ NS+L +K +
Sbjct: 358 PNKVTYSVLIEGCCNS---GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 414
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ + + GV + +TY I+M LC ++ + LL M ++G+ PN V YN +I
Sbjct: 415 SKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 473
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ G + A S+ SDM +PN VT+SILI K+ + AL L ++ S P
Sbjct: 474 HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 533
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T ++ LC VG++ +A + L+ FL+E G +P+ TYN
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKN---------------FLEE----GFIPSCMTYNS 574
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++ + + G +DSAL V+ +M G+S N VTY +LI G C RID LK M +
Sbjct: 575 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE-- 632
Query: 302 EGSKGRISPYNSVLYGLYR----ENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNV 357
+G + ++ Y++++ G + E+ QD E L+ L P + + I GF N+
Sbjct: 633 KGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV--GLSPNRIVYNSMISGFRDLNNM 690
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A + +MI + ++ Y LI +E R+ AS+L EM G +P TF+ +
Sbjct: 691 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++GLC +G + A K++EE R + P Y+ LI +G + A L +M+
Sbjct: 751 VNGLCNKGQLENARKILEEMDR---KNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 807
Query: 478 KGILPDYLTWNSLL 491
+G++PD +T++ L+
Sbjct: 808 RGLVPDDVTYDILI 821
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 215/472 (45%), Gaps = 32/472 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS F S++ V + + +++M+ G + LMKG C + L
Sbjct: 288 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 347
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ + G+ PN V Y+ LI C +G + +A L + M+ P+ + L+ Y K
Sbjct: 348 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 407
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK- 218
A L +++ G V ++ T ++ LC G++ +A +L+ QG + V
Sbjct: 408 APLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 466
Query: 219 ------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
G CR +M + PNV TY+ILI + G + ALD+F+ M
Sbjct: 467 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 526
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
I+ T++T+I GLC G++ + K+ +E EG YNS++ G +E
Sbjct: 527 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE---EGFIPSCMTYNSIVDGFIKEG 583
Query: 323 QQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D AL ++M + P V + I GFC ++ A + D+M E+G +V Y
Sbjct: 584 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 643
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI +C+ + A +L E+ G P +N+++SG N+ AL ++
Sbjct: 644 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKK---- 699
Query: 441 IGRGSLPGS-GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +P G Y+ LI L ++G AS L ++M+ KGI+PD +T++ L+
Sbjct: 700 MINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 147/307 (47%), Gaps = 28/307 (9%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE- 59
S+ P + F T+I GL + + + +A D + F PS +NSI+D +KE
Sbjct: 527 SLNIAPTDFTFNTIINGLCK---VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 583
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ID A A YR+ M GV + TY L+ G C +NR+ K M+ +G++ + Y
Sbjct: 584 NIDSALAVYRE-MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 642
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+ LI CK + A+ L ++ E PN + ++ +I + N+ ALV +K +
Sbjct: 643 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 702
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKG 219
D+ T T +++ L GR++ A ++ E +G + G+++
Sbjct: 703 DRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLEN 762
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ L+EM+RK P+V YN LI+ Y G L A + ++M G+ + VTYD LI
Sbjct: 763 ARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822
Query: 280 GLCSGGR 286
G G R
Sbjct: 823 GKFKGDR 829
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 196/450 (43%), Gaps = 45/450 (10%)
Query: 50 NSILDVL---VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV-GDGFKLLH 105
N ++D L V + R F R + ++G D Y +L+ L + G KLL+
Sbjct: 61 NHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVD-AYCVLLHILMRSPETHGHARKLLN 119
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVN 165
S P+ V++ + + K D E + V F+ L+ AY + + N
Sbjct: 120 RYVSGDSDPSPVVFVDHLINCAKR----------FDFELDHRV-FNYLLNAYIRANRIEN 168
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A+ +P V + +L L V R M +G+++
Sbjct: 169 AIDCFNAMICQDVIPWVPYMNILLTAL--VRRNM--------------IGELRD---LYN 209
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M +G + T ++++ + + G ++ A + F + K G+ + Y +I+ +C
Sbjct: 210 KMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKP 269
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAV 342
+ GL++L+ M++ G + + SV+ + EAL ++M K V
Sbjct: 270 NSNLGLELLEEMKE--RGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVV 327
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
SL + G+C GN++ A F+++ E+G PN V Y LI C + +ASEL +M
Sbjct: 328 ATSL-MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+G P N++L G + A KL +E + G ++ Y+ ++ LC+
Sbjct: 387 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV-DCGVANI---FTYNIMMSWLCKG 442
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
G A LL MV +G++P+ +++N +++
Sbjct: 443 GKMDEACSLLDNMVNQGMVPNVVSYNDMIL 472
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E+A CF+ MI + +P V + L+ A + + E +L +M G T +
Sbjct: 166 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 225
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ ++G V A + E RG +G YS +I+A+C+K LL +M
Sbjct: 226 MVRACLKEGRVEEAEEYFRETKE---RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMK 282
Query: 477 GKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS 511
+G +P T+ S+++ C++Q L L EM++
Sbjct: 283 ERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 318
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 211/434 (48%), Gaps = 33/434 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G C + R+ D +L+ M V P++ YNT++ LC + +A LM +M
Sbjct: 186 TYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWEQAEELMREM 242
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
PN+VTF+ I A+C+ L A+ LLE+ +G PDV+ + ++ GRV
Sbjct: 243 IRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRV 302
Query: 199 MDAVEILE----ESGEQGRLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISS 245
+A+++L +KG C + EM RK C PN T++ LI+S
Sbjct: 303 DEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINS 362
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ +++ A++V M+ G + V+Y+T+I R DD LK+L+ M K
Sbjct: 363 LCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML-----CK 417
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
+N+VL L + + +A+E + +M K R + + IL C +G V+DA
Sbjct: 418 PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEV 477
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F+ M + +P++V Y LI+ + ++ A +L + M + ++N L GLC
Sbjct: 478 FELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADI---FSYNATLKGLCM 534
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
A +L+ DM + LP ++ LI +LC+KG A + QM GI PD
Sbjct: 535 AARWDDAGELIA-DM--VTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPD 591
Query: 484 YLTWNSLLICLSQQ 497
T+N+L+ S+Q
Sbjct: 592 IFTYNALINGYSEQ 605
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 197/417 (47%), Gaps = 39/417 (9%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
IL+K LC R+ D ++L +K+ G ++V +NTL+ C++G +G A ++
Sbjct: 121 ILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERVVEAARAS 179
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
N VT++ LI YC+ L +AL L+ S PD T VL+ LC + A
Sbjct: 180 GTANVVTYTALIDGYCRSGRLADALRLIA---SMPVAPDTYTYNTVLKGLCCAKQWEQAE 236
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E++ +EM R C PN T+ I ++C+ G+LD A+++ M
Sbjct: 237 ELM-------------------REMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 277
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + + + Y TL+ G GR+D+ LK+L M + YN+ L GL
Sbjct: 278 PKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML-----CRPNTVCYNAALKGLCIAG 332
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ +E E + +M + P S I C + VE A +QM + G +P+VV Y+
Sbjct: 333 RWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 392
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+I + + R +A +L+K M P +FN VL LC+ A++LV + ++
Sbjct: 393 TIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAKMLKK 449
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
R + ++ LI +LC+ G + A + M +PD +T++SL+ S+Q
Sbjct: 450 DCRIN---EMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQ 503
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 225/500 (45%), Gaps = 49/500 (9%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PD + TV++GL A+ + + R + P+ F + + + + L
Sbjct: 209 SMPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGL-L 267
Query: 64 ARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
RA ++M G D Y+ L+ G RV + KLL+ M R PN+V YN
Sbjct: 268 DRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAA 324
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ LC G+ L+++M PND TFS LI + C+ + A+ +LE+ +G+
Sbjct: 325 LKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGY 384
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
+PDVV+ ++ R DA+ + LK M C P+ +
Sbjct: 385 MPDVVSYNTIISCFSDQARADDAL-------------------KLLKSML---CKPDTIS 422
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
+N ++ C+ A+++ M N +T++ LI LC G++ D +++ +LM
Sbjct: 423 FNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELM- 481
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDG 355
K I Y+S++ G + + A + + M +F + + +LK G C+
Sbjct: 482 -PKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIF--SYNATLK--GLCMAA 536
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+DA M+ E +PN V ++ LI + CQ+ V A ++ ++M +G P T+N
Sbjct: 537 RWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYN 596
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++G QG + ALK + P + Y+ ++K LC ++ A L+ +M
Sbjct: 597 ALINGYSEQGRLDDALKFLST------MPCEPDTISYNSILKGLCRAERWKDAEKLVTEM 650
Query: 476 VGKGILPDYLTW---NSLLI 492
+ K P+ +T+ N L I
Sbjct: 651 LRKNCTPNEVTFKYANQLFI 670
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 178/396 (44%), Gaps = 48/396 (12%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P V++ +++ LC+ R+ DA +LE G V ++
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAADAV--------------------SH 153
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N L++ YC G L A V + G + N VTY LI G C GR+ D L+++ M
Sbjct: 154 NTLVAGYCRDGSLGDAERVVEAARASGTA-NVVTYTALIDGYCRSGRLADALRLIASMPV 212
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ + YN+VL GL Q ++A E +++M P V + +I FC +G +
Sbjct: 213 APDTYT-----YNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLL 267
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A +QM + G P+V+IY L++ + + RV EA +L+ M P +N
Sbjct: 268 DRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAA 324
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
L GLC G +L+ E +R + P +S LI +LC+ + A +L QM
Sbjct: 325 LKGLCIAGRWEEVGELIAEMVR---KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381
Query: 478 KGILPDYLTWNSLLICLSQQTTW-----LL--LLLLNEMVSFVMVVHELSAKEKRCKL-R 529
G +PD +++N+++ C S Q LL +L + +SF V+ L CK R
Sbjct: 382 YGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCL------CKAKR 435
Query: 530 SLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
+ + A + RI++ T +ID + G V
Sbjct: 436 WYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQV 471
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 222/513 (43%), Gaps = 30/513 (5%)
Query: 3 HSIQSPPDESIFITVIRGL----GRARMINDVVKATDLVSRF-NMTPSLKIFNSILDVLV 57
H++ PP F R L R + +++ + R P+ +N+++ L
Sbjct: 81 HALSPPPLRPFFDRPFRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALC 140
Query: 58 KEDIDLARA-FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
+ DL A Y M+ SG + D +T+ L+ G C T ++ L M RG ++
Sbjct: 141 RR-ADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDA 199
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
V Y LI C+ G++ A L +M +P+ T + L+ C L +L+K
Sbjct: 200 VSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKEL 259
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G+ P +++L C + +A +IL E + G R G++ G
Sbjct: 260 GWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGA 319
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
R + M KGC PNV TYN ++ +C G + A+ + + M+ G+ + VTY+ LIRG
Sbjct: 320 VRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRG 379
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
C G I ++L+LME + G YN ++ L + + DEA +E +
Sbjct: 380 QCIDGHIGSAFRLLRLMEGN--GLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIR 437
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P +V + I G C G + A + MI G P+ Y I C+ + +E
Sbjct: 438 PNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFF 497
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ EM P + V++ L + N G A ++ + + +G P Y+ ++A
Sbjct: 498 IDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ---MVSQGCSPDVVTYTTSVRA 554
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C +G A ++ +M + D + +N+L+
Sbjct: 555 YCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLI 587
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 176/403 (43%), Gaps = 50/403 (12%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M GV+ D TY +L++G C+ +G F+LL +M+ G+ + YN LI +LCK G
Sbjct: 360 QMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTG 419
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A SL +E PN VTF+ +I CK A LE S G+ PD T +
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYS 479
Query: 187 KVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKG---GCRFLKEMERK 230
+E LC + + ++E ++ RL + R +M +
Sbjct: 480 PFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQ 539
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC P+V TY + +YC G LD A +V +MK + + Y+TLI G S G+ D
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRA 599
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLY---------------------GLYRENQQDEALE 329
+ IL+ M G S N + +++ + + E
Sbjct: 600 VTILKHM-------TGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFE 652
Query: 330 YLKQMEK-LFPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+ M+K P + L IL GF + +++ M EE N IY+ L++ +C
Sbjct: 653 LFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFC 712
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
+ +A L+ M GHG+LP + +LSGL +G A
Sbjct: 713 KLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRA 755
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 222/540 (41%), Gaps = 108/540 (20%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID A +R+ Q D YT+A L+KGLC R +G +L MK G +P + Y
Sbjct: 215 IDEALELFREM-----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYA 269
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
L+ C+ K A ++++M + P VT +I++ AYC+E + A+ + E
Sbjct: 270 ALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFK 329
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC-------- 221
G P+V T +++ C+ G+V A+ +L++ E G V +G C
Sbjct: 330 GCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSA 389
Query: 222 -RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
R L+ ME G + TYN+LI + C+TG +D A +F+ ++ GI N VT++T+I G
Sbjct: 390 FRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVING 449
Query: 281 LCSGGRIDDGLKILQLM----------------------EDSKEG-----------SKGR 307
LC G+ D L+ M + S+EG K
Sbjct: 450 LCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPS 509
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y V+ L+ E A QM + P V + + +C +G +++A+
Sbjct: 510 TVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVT 569
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL---- 421
+M + + + + Y+ LI + + A ++K MTG +P TF +L L
Sbjct: 570 EMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRR 629
Query: 422 ------CRQGNVGTALKLVE--EDMRGIGRGSLPGSGH---------------------- 451
+ +V ++L + E + + S+P S
Sbjct: 630 LAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLV 689
Query: 452 --------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ L+ C+ + A LL M+G G LP+ + + LL L+ +
Sbjct: 690 SLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAE 749
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 148/383 (38%), Gaps = 50/383 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F TVI GL +A + + + P ++ ++ L K F+
Sbjct: 438 PNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFF 497
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ V+ Y I++ L G ++ M S+G P+ V Y T + + C
Sbjct: 498 IDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCN 557
Query: 129 NGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPD--- 181
G++ A +++++M++ + ++ LI + A+ +L+ +P+
Sbjct: 558 EGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFT 617
Query: 182 --------------------VVTITKVLEL--------------LCSVGRVMDAVEILEE 207
++ K +EL + S R + ILE
Sbjct: 618 FFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTY--LSILEG 675
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLP-NVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
E+ RL +V +KE LP N D YN L++ +C+ + A + M G
Sbjct: 676 FSEERRLDEVTSLVSLMKEEN----LPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHG 731
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
N + Y L+ GL + G+ D +I + KE + I + ++ G R+ D
Sbjct: 732 FLPNLIFYQYLLSGLTAEGQADRAKEIFR-SSRWKEYNTDEIV-WKVIIDGFIRKGHADM 789
Query: 327 ALEYLKQMEKLFPRAVDRSLKIL 349
+ + +E++ + D + +L
Sbjct: 790 CHDMISMLEQMKCKPSDETYAML 812
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 215/472 (45%), Gaps = 29/472 (6%)
Query: 43 TPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
P++ FN ++D L K+ ++ ARA + +M A G D TY L+ G + +
Sbjct: 196 APNVFTFNIVIDFLCKQGELVEARALF-VRMKAMGCSPDVVTYNSLIDGYGKCGELEEVE 254
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
L+ M+ G + V YN LI+ K G + +A S +M+ N VT S + A+
Sbjct: 255 LLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAF 314
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
CKE + A+ L + G +P+ T T +++ C GR+ DA+ +L+E QG
Sbjct: 315 CKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 374
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ GKV L MER G N Y LI + + ALD+ N+
Sbjct: 375 VTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNE 434
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
MK G+ + Y TLI GLC ++D+ +L M+D G + Y +++ ++
Sbjct: 435 MKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDC--GLRPNTVIYTTIMDAFFKA 492
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
++ EA+ L ++ L P V I G C G++ +A FD+M E G PNV +Y
Sbjct: 493 GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVY 552
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
LI +C+ + +A LM EM G + +++ G +QG++ A L +
Sbjct: 553 TTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFAL---KAK 609
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I G Y+ I C Q A +L +M+G GI PD +N L+
Sbjct: 610 MIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 200/447 (44%), Gaps = 60/447 (13%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYC 158
D + L ++ V PN+ N ++ L +N + G R L + PN TF+I+I C
Sbjct: 151 DAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDFLC 210
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K+ LV A L + + G PDVVT +++ G + + ++ E + G
Sbjct: 211 KQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVV 270
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ G ++ + EM+R G + NV T + + ++C+ G++ A+ +F M
Sbjct: 271 TYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQM 330
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGL------------------------------- 291
++ G+ N TY +L+ G C GR+DD +
Sbjct: 331 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 390
Query: 292 ----KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+L LME + G K Y ++++G + + AL+ L +M K +D SL
Sbjct: 391 AVADDVLSLME--RAGVKANELLYTTLIHGHFMNKNSERALDLLNEM-KNKGMELDVSLY 447
Query: 348 ---ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
I G C +++AK +M + G PN VIY ++ A+ + + EA L+ ++
Sbjct: 448 GTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPD 507
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T+ ++ GLC+ G++ A+ ++ MR +G P Y+ LI C+ G
Sbjct: 508 SGLQPNVVTYCALIDGLCKAGSIYEAISHFDK-MRELGLD--PNVQVYTTLIDGFCKIGS 564
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A L+ +MV KG+ D + + SL+
Sbjct: 565 LSKAVHLMNEMVDKGMSLDKVVYTSLI 591
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 171/395 (43%), Gaps = 38/395 (9%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
+ R + ++ ++ +D KE + +M G+ +++TY L+ G C R
Sbjct: 295 MKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 354
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
+ D LL M +G+ PN V Y ++ LCK GKV A ++S ME + N++ ++
Sbjct: 355 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTT 414
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI + +N AL LL + + G DV ++ LC V ++ +A +L + + G
Sbjct: 415 LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ GK L ++ G PNV TY LI C+ G + A+
Sbjct: 475 LRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAI 534
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
F+ M+ G+ N Y TLI G C G + + ++ M D +G Y S++
Sbjct: 535 SHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVD--KGMSLDKVVYTSLID 592
Query: 317 GLYRENQQDEALEYLKQMEKLFPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQM 367
G ++ A +M ++ L+ I GFC +++A+ +M
Sbjct: 593 GHMKQGDLQGAFALKAKM-------IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM 645
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
I G P+ Y+CLI Y + + EAS L EM
Sbjct: 646 IGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 143/345 (41%), Gaps = 55/345 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-------- 60
P+E + +++ G +A ++D + D + + P++ + ++D L KE
Sbjct: 337 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDV 396
Query: 61 ----------------IDLARAFYRKK-----------MMASGVQGDDYTYAILMKGLCL 93
L + K M G++ D Y L+ GLC
Sbjct: 397 LSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCK 456
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
++ + LLH M G++PN+VIY T++ + K GK A +L+ + +PN VT
Sbjct: 457 VQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVT 516
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ LI CK ++ A+ +K G P+V T +++ C +G + AV ++ E
Sbjct: 517 YCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMV 576
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
++G + G ++G +M G ++ Y IS +C ++
Sbjct: 577 DKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQ 636
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
A V ++M GI+ + Y+ LIR G +++ + ME
Sbjct: 637 EARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEME 681
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 38/251 (15%)
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD---EALEY 330
+DTL+ L G +DD ++ L + + R N +L L R Q E+
Sbjct: 136 FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTC--NHILLRLARNRQGGLVRRLFEH 193
Query: 331 L----------------KQMEKLFPRAVDRSLKILGFCVD--------------GNVEDA 360
L KQ E + RA+ +K +G D G +E+
Sbjct: 194 LPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEV 253
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ +M + G +VV Y+ LI+ + + + +A EM G + T +T +
Sbjct: 254 ELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDA 313
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C++G V A+KL + MR RG +P Y+ L+ C+ G A +LL +MV +G+
Sbjct: 314 FCKEGLVREAMKLFAQ-MR--VRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370
Query: 481 LPDYLTWNSLL 491
+P+ +T+ ++
Sbjct: 371 VPNVVTYTVMV 381
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 9/159 (5%)
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P D L +L G ++DA R ++ + PN + H + R R+
Sbjct: 132 LPSVFDTLLSLLA--DHGLLDDAVRALARVRQLRVPPNTRTCN---HILLRLARNRQGG- 185
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L++ + H P TFN V+ LC+QG + A L +R G P Y+ LI
Sbjct: 186 LVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALF---VRMKAMGCSPDVVTYNSLID 242
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ G + +L+ +M G D +T+N+L+ C S+
Sbjct: 243 GYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSK 281
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 212/440 (48%), Gaps = 31/440 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
IFI + RG A ++ V+A + + +NS++D VK A A YR
Sbjct: 56 IFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYR-V 114
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M SG++ D YT+ +LM RV +KL M+++ PN + Y+ LI ++CK G
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
V +A + DM+ PN T++ +I K ++ A L E+ S G V V
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 188 VLELLCSVGRVMDAVEILEE---SGEQ-------------GRLGKVKGGCRFLKEMERKG 231
++ L GR A ++ E G Q G G+ R +E G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C +V+ YN+LI + C++ LD A ++F +++ DG+ + T++ L+ GLC GRI D
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKIL 349
+L M+ + G ++ YN+++ GL + + +EA + L +M+ L P V + I
Sbjct: 355 ILLGDMK--RAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLID 412
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL---MKEMTGHG 406
C G +EDA R F++ I G N V Y+ +++ C RV EA +L MK+ T G
Sbjct: 413 ESCKGGRIEDALRLFEE-ISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDG 471
Query: 407 YL-PIASTFNTVLSGLCRQG 425
+ P T+ T+L+G + G
Sbjct: 472 VIDPDFVTYTTLLNGARQAG 491
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 30/317 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++I GLG++ ++ + ++ + + ++NS++ L + A A
Sbjct: 192 PNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKL 251
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M++ G+Q D T+ L+ GL + R + ++ + G + +YN LI +LCK
Sbjct: 252 FREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCK 311
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ ++ A + ++EE P+ TF+ L+ CK + +A +LL G PDV
Sbjct: 312 SKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTV 371
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ L GRV EE+G+ L EM+ G P+V TYN LI
Sbjct: 372 YNTLIDGLRKSGRV-------EEAGQ------------LLLEMQSLGYEPDVVTYNTLID 412
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G ++ AL +F ++ G + N VTY+T++ GLC GR+D+ K+ M+ +E
Sbjct: 413 ESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAGRVDEAYKLFNGMK--QETV 469
Query: 305 KGRISP----YNSVLYG 317
G I P Y ++L G
Sbjct: 470 DGVIDPDFVTYTTLLNG 486
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 163/401 (40%), Gaps = 89/401 (22%)
Query: 177 GFVPDVVTITKVLELL-----------------------------------CSVGRVMDA 201
G VP V T ++E+L S G + +
Sbjct: 14 GGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKS 73
Query: 202 VEILEE-SGEQGRL---------------GKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
VE L+ G + L G + + M + G P+ T+N+L+++
Sbjct: 74 VEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNA 133
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-------- 297
+ + +DS +F +M+ S N +TY LI +C G ++ LK+ M
Sbjct: 134 FKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPN 193
Query: 298 -------------------------EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
E + EG YNS+++GL R + D A + +
Sbjct: 194 IFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFR 253
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M + L P V + + G V G +A+R F + + G +V +Y+ LI C+ +
Sbjct: 254 EMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSK 313
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
R+ EA E+ E+ G +P TFN ++ GLC+ G + A L+ + R G P
Sbjct: 314 RLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRA---GCTPDVT 370
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI L + G + A LL++M G PD +T+N+L+
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 227/520 (43%), Gaps = 78/520 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-----KEDID 62
PPD + TVI GL R ++ D + M+P+ +N +L KE I
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ R KM GV+ D TY LM LC R + K+ M +G KP+S IY TL
Sbjct: 263 IFR-----KMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317
Query: 123 IHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+H G + + L+ M +P+ F+ILI AY K + A++ K G
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRFLK------ 225
P++VT V++ LC VG+V DA+ + +G + G C K
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE 437
Query: 226 ---EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
EM +G PN +N L++ C+ G++ A ++F+ M + + +TY TLI G C
Sbjct: 438 LAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYC 497
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
G++D+ K+L+ M +G K YN++
Sbjct: 498 LDGKVDEATKLLEGM--VLDGVKPNEVTYNTI---------------------------- 527
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
I G+C +G +EDA F QM +G P +VIY ++H Q R+ A EL M
Sbjct: 528 -----INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM 582
Query: 403 TGHGY-LPIASTFNTVLSGLCRQGNVGTALKLVEE----DMRGIGRGSLPGSGHYSPLIK 457
G LPI T+N +L GLC+ AL++ D R ++ +I
Sbjct: 583 IKCGIKLPIG-TYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRT-------FNIMID 634
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
AL + G A L ++ +G++P+ +T+ ++ L +Q
Sbjct: 635 ALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 674
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 202/442 (45%), Gaps = 36/442 (8%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL-LHVMKSRGVKPNSVIY 119
+DLA A +++ +G T++ L+KGLC R D + L M + G PN+ Y
Sbjct: 112 LDLAFAAL-GRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSY 170
Query: 120 NTLIHSLCKNGKVGRARSLMSDME--------EPNDVTFSILICAYCKEENLVNALVLLE 171
N L+ LC + +A L+ M P+ V+++ +I +E L A L +
Sbjct: 171 NILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFD 230
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
+ G P+ +T +L CS G+ +A+ I ++M R G
Sbjct: 231 EMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIF-------------------RKMCRDG 271
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+V TYN L+ C+ G A VF+ M G + Y TL+ G + G +
Sbjct: 272 VEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMH 331
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++L +M + G++ +N ++ + DEA+ +M + L P V +
Sbjct: 332 QLLDVM--VRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMD 389
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
C G V+DA FD++I EG PN V++ LIH C ++ +A EL EM G G P
Sbjct: 390 ALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICP 449
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
FNT+L+ LC++G V A + + +R + + Y+ LI C G A+
Sbjct: 450 NTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVIT---YTTLIDGYCLDGKVDEAT 506
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
LL MV G+ P+ +T+N+++
Sbjct: 507 KLLEGMVLDGVKPNEVTYNTII 528
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 204/469 (43%), Gaps = 36/469 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD SI+ T++ G + + + D++ R P IFN ++ K +
Sbjct: 309 PDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLA 368
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+ + TY +M LC +V D + S G+ PN V++ TLIH LC
Sbjct: 369 FSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCA 428
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K +A L +M PN + F+ L+ CKE + A + + DV+T
Sbjct: 429 CDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVIT 488
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C G+V +A ++LE G V G + PN TYN +I+
Sbjct: 489 YTTLIDGYCLDGKVDEATKLLE--------GMVLDGVK-----------PNEVTYNTIIN 529
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ G ++ A +F M G++ V Y T++ GL RI ++ M K G
Sbjct: 530 GYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM--IKCGI 587
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKR 362
K I YN +L GL + N D+AL + + +R+ I+ G ++AK
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKD 647
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++ G VPNVV Y ++ + ++ + E +L + +G + N ++ L
Sbjct: 648 LFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLP 707
Query: 423 RQGNV---GTALKLVEEDMRGIGRGS------LPGSGHYSPLIKALCEK 462
++G V G L ++E+ + + L SG Y I ++ EK
Sbjct: 708 QKGEVRKAGVYLSKIDENNFSLEASTAESLVFLVSSGKYDQHINSIPEK 756
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 8/163 (4%)
Query: 340 RAVDRSLKILGFCVDGNVEDAKR-CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
+A+ S + G C D DA +M G PN Y+ L+ C E R ++A L
Sbjct: 130 QAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHL 189
Query: 399 MKEM----TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
+ M T G P ++ TV++GL R+G + A L +E + +G P Y+
Sbjct: 190 LHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDE---MLDQGMSPNCITYNC 246
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ C G + A + +M G+ PD +T+N+L++ L +
Sbjct: 247 LLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKN 289
>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
Length = 728
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 210/440 (47%), Gaps = 29/440 (6%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV+ + TYA + GLC +V + L ++ RG N+ +N +IH C +G+V +A
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ M++ P+ ++SIL+ CK+ +++ +L + G P++V+ + +L
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362
Query: 192 LCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRFL---------KEMERKGCLPN 235
LC GRV A E+ + +QG + G C+ L +M +P+
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
Y+ LI +YC L AL+VF M DGI N VT L+ G + G I G L
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLI--GEAFLF 480
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
L + + G + Y +++GL + N+ ++ M K P V S+ I GF
Sbjct: 481 LDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVK 540
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
++++A R + +M++EG PN+ Y LI+ C ++++ E L K M G G P
Sbjct: 541 ALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRIL 600
Query: 414 FNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ ++++ C++ N+ AL++ E + G+ S Y+ LI + A + +
Sbjct: 601 YTSLIACYCKRSNMKAALEIFREMETEGLSADSFV----YTCLIGGFSKVLAMDGAQLFM 656
Query: 473 VQMVGKGILPDYLTWNSLLI 492
+M+ KG+ P +T+ L++
Sbjct: 657 EEMMNKGLTPTVVTYTDLIV 676
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 192/432 (44%), Gaps = 27/432 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + F VI G ++ ++ D + + P + ++ ++D L K+ L +
Sbjct: 280 PCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYY 339
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +G+ + +Y+ L+ GLC RV F+L +K +G K + ++Y+ ++H C
Sbjct: 340 MLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCC 399
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++ + L +DM P+ +S LI AYC+ L AL + E S G P+VV
Sbjct: 400 QHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVV 459
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ + G + +A FL ++ + G +P++ TY ++I
Sbjct: 460 TCTILVHGFSNEGLIGEAF-------------------LFLDKVRQFGVVPSLCTYRVII 500
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ + +F DM G + V Y +I G + + ++ M D EG
Sbjct: 501 HGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD--EG 558
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+K I Y S++ GL +++ E + K M E L P + + I +C N++ A
Sbjct: 559 TKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAAL 618
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M EG + +Y CLI + + + A M+EM G P T+ ++ G
Sbjct: 619 EIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGY 678
Query: 422 CRQGNVGTALKL 433
+ G+ A+ +
Sbjct: 679 FKIGDEKKAMAM 690
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 15/314 (4%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETG--VLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+M+ G PNV +Y++L+S Y L+ AL++ ++M+++G+ N TY T + GL
Sbjct: 199 FDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGL 258
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
C ++ LQ++ + G +N+V++G + Q +A+E M+K P
Sbjct: 259 CHAKQVKSAWNFLQML--CQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVP 316
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
S+ + G C G+V +M G PN+V Y L+H C+ RV A EL
Sbjct: 317 DVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELF 376
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
K + G+ ++ VL G C+ ++ L DM + +P + +YS LI A
Sbjct: 377 KRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDL-WNDM--VHHNFVPDAYNYSSLIYAY 433
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHEL 519
C + A + MV GI P+ +T L+ S + L+ E F+ V +
Sbjct: 434 CRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEG------LIGEAFLFLDKVRQF 487
Query: 520 SAKEKRCKLRSLNH 533
C R + H
Sbjct: 488 GVVPSLCTYRVIIH 501
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 245/494 (49%), Gaps = 41/494 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLAR 65
P++ + +I G + ++ KA++L ++ + PS+ NS+L +K +
Sbjct: 398 PNKVTYSVLIEGCCNS---GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEA 454
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ + + GV + +TY I+M LC ++ + LL M ++G+ PN V YN +I
Sbjct: 455 SKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG 513
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ G + A S+ SDM +PN VT+SILI K+ + AL L ++ S P
Sbjct: 514 HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPT 573
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T ++ LC VG++ +A + L+ FL+E G +P+ TYN
Sbjct: 574 DFTFNTIINGLCKVGQMSEARDKLK---------------NFLEE----GFIPSCMTYNS 614
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++ + + G +DSAL V+ +M G+S N VTY +LI G C RID LK M +
Sbjct: 615 IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMRE-- 672
Query: 302 EGSKGRISPYNSVLYGLYR----ENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNV 357
+G + ++ Y++++ G + E+ QD E L+ L P + + I GF N+
Sbjct: 673 KGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEV--GLSPNRIVYNSMISGFRDLNNM 730
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A + +MI + ++ Y LI +E R+ AS+L EM G +P TF+ +
Sbjct: 731 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++GLC +G + A K++EE R + P Y+ LI +G + A L +M+
Sbjct: 791 VNGLCNKGQLENARKILEEMDR---KNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 847
Query: 478 KGILPDYLTWNSLL 491
+G++PD +T++ L+
Sbjct: 848 RGLVPDDVTYDILI 861
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 215/471 (45%), Gaps = 30/471 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS F S++ V + + +++M+ G + LMKG C + L
Sbjct: 328 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNL 387
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ + G+ PN V Y+ LI C +G + +A L + M+ P+ + L+ Y K
Sbjct: 388 FNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLK 447
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK- 218
A L +++ G V ++ T ++ LC G++ +A +L+ QG + V
Sbjct: 448 APLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVS 506
Query: 219 ------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
G CR +M + PNV TY+ILI + G + ALD+F+ M
Sbjct: 507 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGL-KILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
I+ T++T+I GLC G++ + K+ +E EG YNS++ G +E
Sbjct: 567 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE---EGFIPSCMTYNSIVDGFIKEG 623
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D AL ++M + + P V + I GFC ++ A + D+M E+G +V Y
Sbjct: 624 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYS 683
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI +C+ + A +L E+ G P +N+++SG N+ AL ++ +
Sbjct: 684 ALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIND 743
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L G Y+ LI L ++G AS L ++M+ KGI+PD +T++ L+
Sbjct: 744 RIPCDL---GTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 147/307 (47%), Gaps = 28/307 (9%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE- 59
S+ P + F T+I GL + + + +A D + F PS +NSI+D +KE
Sbjct: 567 SLNIAPTDFTFNTIINGLCK---VGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 623
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ID A A YR+ M GV + TY L+ G C +NR+ K M+ +G++ + Y
Sbjct: 624 NIDSALAVYRE-MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAY 682
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+ LI CK + A+ L ++ E PN + ++ +I + N+ ALV +K +
Sbjct: 683 SALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMIN 742
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKG 219
D+ T T +++ L GR++ A ++ E +G + G+++
Sbjct: 743 DRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLEN 802
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ L+EM+RK P+V YN LI+ Y G L A + ++M G+ + VTYD LI
Sbjct: 803 ARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862
Query: 280 GLCSGGR 286
G G R
Sbjct: 863 GKFKGDR 869
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 196/450 (43%), Gaps = 45/450 (10%)
Query: 50 NSILDVL---VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV-GDGFKLLH 105
N ++D L V + R F R + ++G D Y +L+ L + G KLL+
Sbjct: 101 NHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVD-AYCVLLHILMRSPETHGHARKLLN 159
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVN 165
S P+ V++ + + K D E + V F+ L+ AY + + N
Sbjct: 160 RYVSGDSDPSPVVFVDHLINCAKR----------FDFELDHRV-FNYLLNAYIRANRIEN 208
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A+ +P V + +L L V R M +G+++
Sbjct: 209 AIDCFNAMICQDVIPWVPYMNILLTAL--VRRNM--------------IGELRD---LYN 249
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M +G + T ++++ + + G ++ A + F + K G+ + Y +I+ +C
Sbjct: 250 KMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKP 309
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAV 342
+ GL++L+ M++ G + + SV+ + EAL ++M K V
Sbjct: 310 NSNLGLELLEEMKE--RGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVV 367
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
SL + G+C GN++ A F+++ E+G PN V Y LI C + +ASEL +M
Sbjct: 368 ATSL-MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+G P N++L G + A KL +E + G ++ Y+ ++ LC+
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV-DCGVANI---FTYNIMMSWLCKG 482
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
G A LL MV +G++P+ +++N +++
Sbjct: 483 GKMDEACSLLDNMVNQGMVPNVVSYNDMIL 512
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E+A CF+ MI + +P V + L+ A + + E +L +M G T +
Sbjct: 206 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 265
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ ++G V A + E RG +G YS +I+A+C+K LL +M
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKE---RGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMK 322
Query: 477 GKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS 511
+G +P T+ S+++ C++Q L L EM++
Sbjct: 323 ERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 358
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 201/447 (44%), Gaps = 29/447 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P+ + N I+ V + + ++M GVQ D +Y +++ C + +
Sbjct: 166 LVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEAD 225
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAY 157
K L VM RG ++ + +I G RA R L+ EPN + F+ +I
Sbjct: 226 KWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGL 285
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK ++ A +LE+ G+ P+V T T +++ LC G A +
Sbjct: 286 CKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRL------------- 332
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
FLK + + PNV TY +IS YC L+ A + + MK G+ N TY TL
Sbjct: 333 -----FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTL 387
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--ME 335
I G C G + ++ LM S EG + YN+++ GL + + EA + L+
Sbjct: 388 IDGHCKAGNFERAYDLMNLM--SSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQN 445
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
L P ++ + C N+ A F++M++ G P++ Y LI +C+E R++E+
Sbjct: 446 GLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKES 505
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+E G +P T+ +++ G CR+GN+ A+K R G P S Y +
Sbjct: 506 EMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFH---RLSDHGCAPDSITYGAI 562
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILP 482
I LC++ A L M+ KG++P
Sbjct: 563 ISGLCKQSKRDEARSLYDSMIEKGLVP 589
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 178/384 (46%), Gaps = 33/384 (8%)
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN-ALVLLEKSFSF 176
++ S + G++ A ++ +M PN T + +I E LV A +L E+
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWII-KVTSEMGLVEYAELLFEEMCVR 199
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD ++ ++ + C +G +++A ++L M +G + +
Sbjct: 200 GVQPDSISYRVMVVMYCKIGNILEAD-------------------KWLSVMLERGFVVDN 240
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
T+ ++IS + G AL F + G+ N + + +I GLC G I ++L+
Sbjct: 241 ATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLE- 299
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLK--QMEKLFPRAVDRSLKILGFCV 353
E +G K + + S++ GL ++ ++A +LK + E P + + I G+C
Sbjct: 300 -EMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCR 358
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+ + A+ +M E+G VPN Y LI +C+ A +LM M+ G+ P T
Sbjct: 359 EDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCT 418
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+N +++GLC++G V A K++E+ G G P Y+ L+ C++ + A L
Sbjct: 419 YNAIVNGLCKRGRVQEAYKMLED---GFQNGLKPDKFTYNILMSEHCKQENIRQALALFN 475
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ 497
+M+ GI PD ++ +L+ ++
Sbjct: 476 KMLKIGIQPDIHSYTTLIAVFCRE 499
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 25/267 (9%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARA-FYRKKMMASGVQGDDYTYAILMKGLCLT 94
LV N P++ + +++ +ED L RA +M G+ + TY L+ G C
Sbjct: 336 LVRSENHKPNVLTYTAMISGYCRED-KLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKA 394
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
+ L+++M S G PN YN +++ LCK G+V A ++ D + P+ T+
Sbjct: 395 GNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTY 454
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+IL+ +CK+EN+ AL L K G PD+ + T ++ + C
Sbjct: 455 NILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC----------------- 497
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
R ++K F +E R G +P TY +I YC G L A+ F+ + G + +
Sbjct: 498 --RENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPD 555
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLM 297
+TY +I GLC + D+ + M
Sbjct: 556 SITYGAIISGLCKQSKRDEARSLYDSM 582
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + + T+I G +A +L+S +P+L +N+I++ L K R
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKR----GRVQE 434
Query: 69 RKKMMASGVQG----DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
KM+ G Q D +TY ILM C + L + M G++P+ Y TLI
Sbjct: 435 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
C+ ++ + + P + T++ +IC YC+E NL A+ + G P
Sbjct: 495 VFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAP 554
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
D +T ++ LC + +A + + E+G
Sbjct: 555 DSITYGAIISGLCKQSKRDEARSLYDSMIEKG 586
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 19/138 (13%)
Query: 41 NMTPSLKIFNSILDVLVKEDID----LARAFYRKKMMAS-----------GVQGDDYTYA 85
N+ +L +FN +L + ++ DI L F R+ M G+ + TY
Sbjct: 466 NIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYT 525
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
++ G C + K H + G P+S+ Y +I LCK K ARSL M E
Sbjct: 526 SMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEK 585
Query: 145 ---PNDVTFSILICAYCK 159
P +VT L YCK
Sbjct: 586 GLVPCEVTRITLAYEYCK 603
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
C++ ++ + R++EA E++ EM G +P T N ++ G V A L EE
Sbjct: 140 CMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEE---M 196
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
RG P S Y ++ C+ G A L M+ +G + D T+ ++
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLII 247
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 225/505 (44%), Gaps = 27/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + + V D + P++ +FN+++D K
Sbjct: 311 PNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKI 370
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M++ + T LM+G C ++++ L + S G+ + +++H LCK
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 430
Query: 129 NGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A + ++S P+D+ ++L+C CK+ + A L + G VT
Sbjct: 431 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 490
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G++ +A I++E E+G GKV+G R +EM
Sbjct: 491 SNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMT 550
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++G P++ TYN L+ C G LD A+ ++++ K G+ N TY ++ G C RI+
Sbjct: 551 KRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 610
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
D + + K + YN ++ + AL+ L+ M+ + P S
Sbjct: 611 DVENLFNELLSKKMELNSIV--YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G VEDAK D+M +EG VPNVV Y LI YC+ ++ A EM
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 728
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ ++ G C+ GN+ A L+ ++ G +P Y+ L C+
Sbjct: 729 IHPNKFTYTVMIDGYCKLGNMEKANNLL---IKMKESGIVPDVVTYNVLTNGFCKANDMD 785
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
+A + QM +G+ D +T+ +L+
Sbjct: 786 NAFKVCDQMATEGLPVDEITYTTLV 810
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 135/564 (23%), Positives = 243/564 (43%), Gaps = 80/564 (14%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ T R LG + V L++R PSLK N +L LVK + + + ++
Sbjct: 180 VYSTQFRNLG----FSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKAN-EFEKCCEVFRV 234
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
M+ G D +++ ++ LC ++ + +L M+ G+ PN V YN +I+ LC+NG++
Sbjct: 235 MSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 294
Query: 133 GRARSLMSDME---------------------------------------EPNDVTFSIL 153
A L M PN V F+ L
Sbjct: 295 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNL 354
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
I YCK N+ AL + + S P VT+ +++ C ++ A LEE G
Sbjct: 355 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 414
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ + RF K M + P+ +L+ C+ G A +
Sbjct: 415 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 474
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
++ + G + VT + LI GLC G++ + +I++ M + + RI+ YN+++ G
Sbjct: 475 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE-RGLPMDRIT-YNALILG 532
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
E + + ++M K + P + + G C G ++DA + +D+ G + N
Sbjct: 533 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 592
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ Y ++ YC+ R+ + L E+ + +N ++ C+ GNV AL+L+
Sbjct: 593 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLL- 651
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
E+M+ +G LP YS LI +C G + A L+ +M +G +P+ + + +L+ C
Sbjct: 652 ENMK--SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 709
Query: 494 L-----SQQTTWLLLLLLNEMVSF 512
+ ++TWL EM+SF
Sbjct: 710 KLGQMDTAESTWL------EMISF 727
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 210/470 (44%), Gaps = 61/470 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR-- 65
P+ +F +I G + I +K D++ N+TP+ S++ K D I+ A
Sbjct: 346 PNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENA 405
Query: 66 -------------------------------AF-YRKKMMASGVQGDDYTYAILMKGLCL 93
AF + K M++ + D +L+ GLC
Sbjct: 406 LEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK 465
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PND-VT 149
+ + +L + +G + V N LIH LC GK+ A ++ +M E P D +T
Sbjct: 466 DGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT 525
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ LI +C E + L E+ G PD+ T +L LC+VG++ DA+++ +E
Sbjct: 526 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 585
Query: 210 EQGRLGKV-------KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G + + +G C+ E+ K N YNI+I ++C+ G +
Sbjct: 586 ASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVA 645
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+AL + +MK GI N TY +LI G+C+ G ++D ++ M KEG + Y +
Sbjct: 646 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR--KEGFVPNVVCYTA 703
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + Q D A +M + P ++ I G+C GN+E A +M E G
Sbjct: 704 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS-TFNTVLSG 420
VP+VV Y+ L + +C+ + A ++ +M G LP+ T+ T++ G
Sbjct: 764 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG-LPVDEITYTTLVHG 812
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 147/294 (50%), Gaps = 22/294 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P D + +I G + + + +++ + P + +N +L L +D A
Sbjct: 520 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 579
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + ASG+ + +TY I+M+G C NR+ D L + + S+ ++ NS++YN +I +
Sbjct: 580 LW-DEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+NG V A L+ +M+ PN T+S LI C + +A L+++ GFVP+V
Sbjct: 639 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 698
Query: 183 VTITKVLELLCSVGRVMDA----VEILEESGEQGR------------LGKVKGGCRFLKE 226
V T ++ C +G++ A +E++ + + LG ++ L +
Sbjct: 699 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 758
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
M+ G +P+V TYN+L + +C+ +D+A V + M +G+ + +TY TL+ G
Sbjct: 759 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 220/484 (45%), Gaps = 35/484 (7%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
AR Y + ++ G DDY+ ++++GLCL RV +G L+ G P +V YN LI
Sbjct: 65 ARGLYGEMLVREG-GADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
C+ G +GR L+ +ME P VT+ +I ++ +L LL + + G
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+V V+ LC A ++L + + R G V+ +
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+E R+G PN +Y LI +C G A D+ +M G + + +T LI GL
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G+++D L + + M + + I YN ++ GL ++ A L++M +K+ P
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANI--YNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDK 361
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I GF + DA++ F+ M EE P++V Y+ +I YC+ ++EA M
Sbjct: 362 FIYTTLIDGFVRSDKLSDARKIFEFM-EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSS 420
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G +P T+ T++ G ++G++ +L+L+ + M+ R P Y+ LI C
Sbjct: 421 MRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMK---RRCKPNIFTYASLICGYCN 477
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS------QQTTWLLLLLLNEMVSFVMV 515
G SA L +M +G+ P+ + + L+ L Q + +LLN
Sbjct: 478 IGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDAT 537
Query: 516 VHEL 519
VH L
Sbjct: 538 VHYL 541
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 217/522 (41%), Gaps = 74/522 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P + +I LGR D+ K L+ ++P+++I+N++++ L K
Sbjct: 149 PTVVTYGAIIHWLGRK---GDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M+ S D T+ ++ G C V + KLL RG++PN + Y LIH
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C G+ A L+ +M P+ +T LI + +AL++ EK +PD
Sbjct: 266 FCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPD 325
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
++ LC + A +LEE EQ R K+ + +
Sbjct: 326 ANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFE 385
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
ME K C P++ YN++I YC+ G++ A+ + M+ G + TY TL+ G G
Sbjct: 386 FMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
I L++L M K K I Y S+
Sbjct: 445 DISASLRLLCDM--MKRRCKPNIFTYASL------------------------------- 471
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+C G+ A+ F +M EG PNVV Y LI + ++++V +A+ + M +
Sbjct: 472 --ICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLN 529
Query: 406 GYLPIASTFNTVLSGL--CRQGNVGTA---LKLVEED------MRG-IGRGSLPGSGHYS 453
P +T + +++GL CR G V + K E RG I G P Y+
Sbjct: 530 HCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYN 589
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
+I +LC A L +M KG LPD +T+ SLL S
Sbjct: 590 AIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFS 631
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G LP+ N L+ E + A ++ +M + + + ++RGLC GR+++G
Sbjct: 41 GALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEG 100
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
+++ EG YN ++ G R L L +ME + P V I
Sbjct: 101 RGLIE--ARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAII 158
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G++ + +M G PNV IY+ +I+A C+ +AS+++ +M +
Sbjct: 159 HWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFN 218
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P TFNT+++G CR+G+V ALKL+ E +R RG P Y+PLI C +G A
Sbjct: 219 PDVVTFNTMIAGFCREGDVREALKLLREAIR---RGLEPNQLSYTPLIHGFCVRGEAMVA 275
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
S LLV+M+G+G PD +T +L+
Sbjct: 276 SDLLVEMMGRGHTPDMITLGALI 298
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 151/374 (40%), Gaps = 57/374 (15%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
Q PD +I+ +I GL + RM++ + + + P I+ +++D V+ D + A
Sbjct: 321 QVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDA 380
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R + + M D Y +++KG C + + + M+ G P+ Y TL+
Sbjct: 381 RKIF--EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVD 438
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
K G + + L+ DM +PN T++ LIC YC + +A L K S G P
Sbjct: 439 GYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFP 498
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+VV T ++ L +V+ A + + M C PN T +
Sbjct: 499 NVVHYTVLIGSLFKKDKVIQAAA-------------------YFEHMLLNHCPPNDATVH 539
Query: 241 ILISSY--CETGVLDSA-------------LDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
L++ C G+++S LDVF + DG+ Y+ +I LC
Sbjct: 540 YLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHN 599
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYG-------------LYRENQQDEALEYLK 332
+ + + M S +G + S+LYG L E QQDE E +
Sbjct: 600 MLGKAMDLKDKM--SNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEFQQDE-FEIIT 656
Query: 333 QMEKLFPRAVDRSL 346
+ LF + V S+
Sbjct: 657 KYMALFNQHVTSSV 670
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 191/402 (47%), Gaps = 23/402 (5%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N +L LVK A +R +++ + TY L+ G C + F+LL MK
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--PNDVTFSILICAYCKEENLVNA 166
RG P+ V +++++ +LC G + RA + E P+ V F+IL+ CK L A
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEA 192
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR-----------LG 215
++E+ G VPDVVT +++ LC R+ +A ++LE ++ G
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252
Query: 216 KVKGGC-----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
K GC + ++ M + G P+V T+N LIS +C+ +D A +V + MK + N
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPN 312
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY+ LI GLC GR ++ ++L M+ G I YNS++ R Q ++A +
Sbjct: 313 LVTYNVLISGLCDAGRANEACELLSEMDG--RGILPDIITYNSLIGIFCRNFQIEQAFQI 370
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
M + + P + + ++A D M + G +PN+ ++ L+ C
Sbjct: 371 QNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCC 430
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
R+ EA L+ M G P AST+ +++GLC+ G V A
Sbjct: 431 SRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 215/488 (44%), Gaps = 78/488 (15%)
Query: 41 NMTPSLKIFNSILDVL-VKEDIDLARAFYR---KKMMASGVQGDDYTYAILMKGLCLTNR 96
N+ P N++ VL V +D+D++ F+R + + +++T L++ L R
Sbjct: 31 NLVP-----NTVGRVLQVIKDVDVSLFFFRWVTRSHRGESIH-NNFTCNCLLRTLVKARR 84
Query: 97 VGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
+++ + + N + YNTLI CK G + RA L+++M+E P+ VT S
Sbjct: 85 HHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHS 144
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
++ A C NL A+ +S PD V ++ LC ++ +A +++EE
Sbjct: 145 SIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIEE---- 198
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
M +G +P+V TYN LI C++ ++ A + M + N
Sbjct: 199 ---------------MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNL 243
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VTY+TLI G C G ++++ M S G+ + +NS++ G ++++ D+A E L
Sbjct: 244 VTYNTLIYGYCKTGCTGLAHQLIERMIQS--GTHPDVVTFNSLISGFCQKSKIDKACEVL 301
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC-- 387
M+K P V ++ I G C G +A +M G +P+++ Y+ LI +C
Sbjct: 302 HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRN 361
Query: 388 ---------------------------------QEERVREASELMKEMTGHGYLPIASTF 414
+ ER EA L+ M G +P TF
Sbjct: 362 FQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTF 421
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+++ GLC + A L+ MR + G P + Y L+ LC+ G A +LV
Sbjct: 422 NSLMEGLCCSRRLDEARHLLAV-MRRV--GCDPAASTYEVLVTGLCKAGRVDDAKEVLVM 478
Query: 475 MVGKGILP 482
MV +GI P
Sbjct: 479 MVSEGIQP 486
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 29/354 (8%)
Query: 43 TPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
P +FN ++ L K + + AR ++M G+ D TY L+ GLC + R+ +
Sbjct: 170 APDSVLFNILVHGLCKANQLSEARQMI-EEMSERGIVPDVVTYNSLIDGLCKSYRMEEAR 228
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAY 157
+LL M R V+PN V YNTLI+ CK G G A L+ M P+ VTF+ LI +
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGF 288
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
C++ + A +L P++VT ++ LC GR +A
Sbjct: 289 CQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA---------------- 332
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
C L EM+ +G LP++ TYN LI +C ++ A + N M G+ + ++Y TL
Sbjct: 333 ---CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTL 389
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
L R D+ +L M D+ G+ + +NS++ GL + DEA L M ++
Sbjct: 390 AVALLKSERFDEAFALLDNMFDA--GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRV 447
Query: 338 F--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
P A + + G C G V+DAK M+ EG P V ++H +E
Sbjct: 448 GCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLARE 501
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 177/370 (47%), Gaps = 25/370 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DID 62
S++ PD +F ++ GL +A +++ + + +S + P + +NS++D L K ++
Sbjct: 166 SVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
AR + M+ V+ + TY L+ G C T G +L+ M G P+ V +N+L
Sbjct: 226 EARQLL-ETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I C+ K+ +A ++ M++ PN VT+++LI C A LL + G
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC----------RF----- 223
+PD++T ++ + C ++ A +I E+G + C RF
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404
Query: 224 -LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L M G +PN+ T+N L+ C + LD A + M+ G TY+ L+ GLC
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
GR+DD ++L +M EG + +S ++++ L RE +QD AL Y Q+ +A
Sbjct: 465 KAGRVDDAKEVLVMM--VSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKAC 522
Query: 343 DRSL-KILGF 351
D S K+L F
Sbjct: 523 DPSYQKLLEF 532
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 148/284 (52%), Gaps = 9/284 (3%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ G ++ + L EM+ +G P+V T++ ++ + C TG L A+ F + + + V
Sbjct: 117 KAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV--ECAPDSV 174
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
++ L+ GLC ++ + ++++ M S+ G + YNS++ GL + + +EA + L+
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEM--SERGIVPDVVTYNSLIDGLCKSYRMEEARQLLE 232
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
M K+ P V + I G+C G A + ++MI+ G P+VV ++ LI +CQ+
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
++ +A E++ M P T+N ++SGLC G A +L+ E GRG LP
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE---MDGRGILPDII 349
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
Y+ LI C + A + MV +G++PD +++ +L + L
Sbjct: 350 TYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVAL 393
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI-DGISWNFVTYDTLIRG 280
R++ R + N T N L+ + + A +F D + N +TY+TLI G
Sbjct: 55 RWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGG 114
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
C G ++ ++L M++ G + ++S++ L A++Y ++ + P
Sbjct: 115 FCKAGDMERAFQLLAEMKE--RGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPD 172
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+V ++ + G C + +A++ ++M E G VP+VV Y+ LI C+ R+ EA +L++
Sbjct: 173 SVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLE 232
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG--------SGH- 451
M P T+NT++ G C+ G G A +L+E R I G+ P SG
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIE---RMIQSGTHPDVVTFNSLISGFC 289
Query: 452 --------------------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
Y+ LI LC+ G A LL +M G+GILPD +
Sbjct: 290 QKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDII 349
Query: 486 TWNSLL 491
T+NSL+
Sbjct: 350 TYNSLI 355
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/490 (26%), Positives = 216/490 (44%), Gaps = 29/490 (5%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDD-YTYAI 86
DV A L+ P +N + V D+D A A R+ + G D ++Y +
Sbjct: 141 DVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNV 200
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG---RAR-SLMSDM 142
++ GL + + D K+ M RGV PN + YNT+I K G + R R ++ D
Sbjct: 201 VIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDG 260
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+PN VT+++L+ C+ + L+++ S+ +PD T + + + L G +
Sbjct: 261 RKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTML 320
Query: 203 EILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+ ES ++G + GKV + L+ + G +P YN LI+ Y
Sbjct: 321 SLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGY 380
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ L A +F MK I + +TY+ LI GLC I + ++ ME K G
Sbjct: 381 CQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME--KSGVDP 438
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ +N+++ R Q ++ L M+ + + + FC +G + +A
Sbjct: 439 SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAIL 498
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D MI + VPN +Y+ +I AY + +A L+++M G T+N +L GLC+
Sbjct: 499 DDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKN 558
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A +L+ +G P Y+ +I A C KG A LL +M I P
Sbjct: 559 SQIDEAEELI---YNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTL 615
Query: 485 LTWNSLLICL 494
T++ LL L
Sbjct: 616 RTYHPLLSAL 625
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 204/462 (44%), Gaps = 64/462 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + VI GL R+ +D +K D + + P+ +N+++D VK DL F
Sbjct: 192 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGG-DLEAGF 250
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
R +M+ G + + TY +L+ GLC R+ + L+ M S + P+ Y+ L
Sbjct: 251 RLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGL 310
Query: 123 -------------------------------IHSLCKNGKVGRARSLMSDMEE----PND 147
++ LCK+GKV +A ++ + P
Sbjct: 311 TRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 370
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
++ LI YC+ +L A + E+ S PD +T ++ LC + + +A +++
Sbjct: 371 AIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLV-- 428
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
EME+ G P+V+T+N LI +Y G L+ V +DM+ GI
Sbjct: 429 -----------------MEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N +++ ++++ C G+I + + IL M ++ YNS++ ++A
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQV--YNSIIDAYIESGGTEQA 529
Query: 328 LEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+++M+ A + +L G C + +++A+ + +G P+VV Y+ +I A
Sbjct: 530 FLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISA 589
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
C + A EL++EM + P T++ +LS L G V
Sbjct: 590 CCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRV 631
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 191/422 (45%), Gaps = 34/422 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL RA +++ D ++ ++M P ++ + D L +
Sbjct: 263 PNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSL 322
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV YT +IL+ GLC +V ++L ++ G+ P + IYNTLI+ C+
Sbjct: 323 FGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQ 382
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A S+ M+ P+ +T++ LI CK E + A L+ + G P V T
Sbjct: 383 VRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVET 442
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ G++ +L + ++G + GK+ L +M
Sbjct: 443 FNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMI 502
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K +PN YN +I +Y E+G + A + MK G+S + TY+ L++GLC +ID
Sbjct: 503 HKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQID 562
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS--- 345
+ +++ + + +G + + YN+++ + D ALE L++M K R R+
Sbjct: 563 EAEELIYNL--TNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHP 620
Query: 346 -LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
L LG G V D + + M+ + P+ IY C+ E + + L KEM+
Sbjct: 621 LLSALGSA--GRVHDMECLYQHMVHKNVEPSSSIYG----TRCENE--SKVASLKKEMSE 672
Query: 405 HG 406
G
Sbjct: 673 KG 674
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 5/261 (1%)
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP++ + N+L+ S G F + G + ++ ++ + G +D+ L
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+L+ M S+ YN V+ GL+R + +AL+ +M + P + + I G
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
G++E R DQM+++G PNVV Y+ L+ C+ R+ E LM EMT + LP
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T++ + GL R G+ T L L E ++ +G + G+ S L+ LC+ G A
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLK---KGVIIGAYTCSILLNGLCKDGKVAKAEQ 356
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+L +V G++P +N+L+
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLI 377
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 218/482 (45%), Gaps = 67/482 (13%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYR 69
+ F ++IR G A + + +K + ++PS+ FNS+L +++K +A+ +
Sbjct: 165 DRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFD 224
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ + GV D YT+ IL++G C+ + V +GF M P+ V YNTL+ LC+
Sbjct: 225 EMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRA 284
Query: 130 GKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GKV A +++ M + PN VT++ LI YC ++++ AL LL + S G P+ +
Sbjct: 285 GKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKI 344
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ LC ++ EILE G V G G +P+ T N LI
Sbjct: 345 TYNTLIQGLCEAQKLDKIKEILE--------GMVGDG----------GFIPDTCTLNTLI 386
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK-- 301
++C G L+ A VF M + + TY L+R LC G + + + +
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 302 ---EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
G K ++ YN + EYL C +G +
Sbjct: 447 LHDVGCKPLVAAYNPM-------------FEYL--------------------CSNGKTK 473
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A+R F Q+++ G + Y LI +C+E +L+ M ++P A T+ ++
Sbjct: 474 KAERVFRQLMKR-GTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMI 532
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GL ++G+ A K +E+ ++ LP + + ++ AL EKG ++ L+ M+ +
Sbjct: 533 DGLLKKGDPVLAHKSLEKMLKS---SHLPTTAIFHSILAALVEKGCAHESASLVKLMLER 589
Query: 479 GI 480
I
Sbjct: 590 RI 591
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 200/460 (43%), Gaps = 50/460 (10%)
Query: 60 DIDLAR--AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+++ AR F +K V+ D + L++ + K+ MK GV P+ V
Sbjct: 142 NLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVV 201
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEK 172
+N+L+ + K G+ A+ L +M + P+ TF+ILI +C + ++
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG- 231
F PDVVT +++ LC R GKVK +K M +K
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLC-------------------RAGKVKIAHNVVKGMVKKSP 302
Query: 232 -CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
PNV TY LI YC + AL + +M G+ N +TY+TLI+GLC ++D
Sbjct: 303 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYREN----QQDEALEYLKQMEKLF--PRAVDR 344
+IL+ M G G I P L L + + + +EA ++M +L P +
Sbjct: 363 KEILEGM----VGDGGFI-PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 417
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEE-------GGVPNVVIYDCLIHAYCQEERVREASE 397
S+ + C G+ A+ FD++ E+ G P V Y+ + C + ++A
Sbjct: 418 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 477
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+ +++ G S + T++ G CR+G L+ +R R +P + Y +I
Sbjct: 478 VFRQLMKRGTQDPPS-YKTLILGHCREGTPEAGFDLLVLMLR---RDFVPDAETYGLMID 533
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L +KG A L +M+ LP ++S+L L ++
Sbjct: 534 GLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 573
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 164/404 (40%), Gaps = 61/404 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD F +IRG M+++ +SRF P + +N+++D L VK ++
Sbjct: 234 PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNV 293
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ +K + + + TY L++G C+ + + LL M SRG+KPN + YNTLI
Sbjct: 294 VKGMVKK---SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLI 350
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC+ K+ + + ++ M P+ T + LI A+C L A + EK
Sbjct: 351 QGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRV 410
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PD T + ++ LC G A E +E E+ L + GC P V
Sbjct: 411 QPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL------------LHDVGCKPLVAA 458
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN + C G A VF + G + + +Y TLI G C G + G +L LM
Sbjct: 459 YNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLM- 516
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
L R+ P A L I G G+
Sbjct: 517 -------------------LRRD---------------FVPDAETYGLMIDGLLKKGDPV 542
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
A + ++M++ +P I+ ++ A ++ E++ L+K M
Sbjct: 543 LAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLM 586
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 202/413 (48%), Gaps = 30/413 (7%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
++++ G C + RV D LL M GV+ N++ YN+L+ + R + L+ ME
Sbjct: 136 SVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEIMEN 195
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
E T++IL+ + ++ ++++ + DV T V+ C G V
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRR 255
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A E+ +E +G G PN TY +LI+ +C+ G +++A +
Sbjct: 256 ASEVFDEC-----VG--------------NGIEPNERTYGVLINGFCKIGQMEAAEMLLA 296
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DM+ G+ N + ++T+I G C G +D+ LK+ ME K G + + YN++ GL R
Sbjct: 297 DMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAME--KMGIELDVYTYNTLACGLCR 354
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
N+ EA L M + + P V + I C +G++ +A+R F +M +G +P+VV
Sbjct: 355 VNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVT 414
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ ++ Y ++ +REA KEM G +P T+ +++ G C G V ALKL EE
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
RG+ P Y+ LI L ++G + A L M+ G+ PD +++L+
Sbjct: 475 H---RGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 161/334 (48%), Gaps = 26/334 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ ++ L A I+ V D + N+ + ++ ++++ + ++ A + +
Sbjct: 205 YTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVF-DEC 263
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ +G++ ++ TY +L+ G C ++ LL M+ RGV N +I+NT+I C+ G V
Sbjct: 264 VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMV 323
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + + ME E + T++ L C C+ + A LL G P+ VT T +
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383
Query: 189 LELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGC 232
+ + C G +++A + E +G + G ++ RF KEME+KG
Sbjct: 384 ISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGL 443
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+P+V TY L+ +C G +D AL +F +MK G N V Y LI GL GR ++
Sbjct: 444 VPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEA-- 501
Query: 293 ILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQD 325
QL +D K G S Y++++ L+ +N++D
Sbjct: 502 -FQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKD 534
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 191/426 (44%), Gaps = 31/426 (7%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P S+ SP S+ V+ G ++ ++D D + R + + +NS+LD V+
Sbjct: 127 PGSV-SPLAASV---VVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKD 182
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D + M G++ TY IL+ L + ++ MK++ V + +Y
Sbjct: 183 DARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTA 242
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I++ C+ G V RA + + EPN+ T+ +LI +CK + A +LL G
Sbjct: 243 VINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRG 302
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ + +++ C G V +A+ KVK ME+ G +V
Sbjct: 303 VGHNQIIFNTMIDGYCRQGMVDNAL-------------KVKAA------MEKMGIELDVY 343
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN L C + A + + M G+ N+VTY TLI C G + + ++ + M
Sbjct: 344 TYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREM 403
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
+ +G+ + YN ++ G ++ EA + K+MEK L P + + G CV+G
Sbjct: 404 --AGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNG 461
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V+ A + F++M G PNVV Y LI +E R EA +L +M G P S ++
Sbjct: 462 KVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYS 521
Query: 416 TVLSGL 421
++ L
Sbjct: 522 ALVGSL 527
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 227/520 (43%), Gaps = 74/520 (14%)
Query: 62 DLARAFYRKKMMASGVQG--DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ AR Y +M+A +G DDY+ ++++GLCL RV +G +L+ G P +V Y
Sbjct: 256 ECARRLY-GEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFY 314
Query: 120 NTLIHSLCKNGKVGRARSLMSDME------------------------------------ 143
N LI C+ G VGR L+ +ME
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
PN ++ +I A CK + AL +L + + F PDVVT ++ C G V +
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A+++L E+ +E+E PN +Y LI +C G + A D+
Sbjct: 435 ALKLLREA--------------IRRELE-----PNQLSYTPLIHGFCVRGEVMVASDLLV 475
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+M G + + VT LI GL G++D+ L + + M + + I YN ++ GL +
Sbjct: 476 EMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANI--YNVLISGLCK 533
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ A L +M +K+ P + I GF + DA++ F+ M E+GG ++V
Sbjct: 534 KRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVA 593
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ +I YC+ + EA M M G +P T+ T++ G ++G++ AL+ + + M
Sbjct: 594 YNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMM 653
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS--- 495
+ R P Y+ LI C G SA +L M +G+ P+ + + L+ L
Sbjct: 654 K---RRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKD 710
Query: 496 ---QQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLN 532
Q + +LLN +H L C+ +N
Sbjct: 711 KAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMIN 750
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 226/522 (43%), Gaps = 73/522 (13%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P +N ++D + D+ R +M G+ TY ++ L + +
Sbjct: 309 PGAVFYNVLIDGYCRRG-DVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIES 367
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
LL MK RG+ PN IYNT+I++LCK +A ++++ M +P+ VTF+ LI A+C
Sbjct: 368 LLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFC 427
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL---- 214
+E ++ AL LL ++ P+ ++ T ++ C G VM A ++L E +G
Sbjct: 428 REGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVV 487
Query: 215 ------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
G+V ++M + +P+ + YN+LIS C+ +L +A ++ +M
Sbjct: 488 TLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEM 547
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + Y TLI G ++ D KI + ME+ +G I YN+++ G +
Sbjct: 548 LEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEE--KGGYRDIVAYNAMIKGYCKSG 605
Query: 323 QQDEALEYLKQMEKL-------------------------------------FPRAVDRS 345
+EA+ + M K+ P V +
Sbjct: 606 MMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYA 665
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+C GN + A+ F M EG PNVV Y LI + ++++ +A+ + M +
Sbjct: 666 SLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLN 725
Query: 406 GYLPIASTFNTVLSGL--CRQGNVGTALKLVEEDMRG----------IGRGSLPGSGHYS 453
P +T + +++GL CR G + + ++ + I G P Y+
Sbjct: 726 HCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYN 785
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
+I +LC A L +M KG LPD +T+ SLL S
Sbjct: 786 AIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFS 827
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 196/460 (42%), Gaps = 45/460 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD--LVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
P+ I+ TVI L + R + + + + SRF+ P + FN+++ +E D++ A
Sbjct: 379 PNVQIYNTVIYALCKCRSASQALAVLNQMVASRFD--PDVVTFNTLIAAFCREGDVEEAL 436
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
R+ + ++ + +Y L+ G C+ V LL M RG P+ V LIH
Sbjct: 437 KLLREAIRRE-LEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHG 495
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L +G+V A + M E P+ +++LI CK+ L A LL + PD
Sbjct: 496 LVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPD 555
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRL-------GKVKGGCRF---------LK 225
T +++ ++ DA +I E E+G +KG C+ +
Sbjct: 556 KFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMS 615
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
M + GC+P+ TY LI Y + G + +AL DM N VTY +LI G C+ G
Sbjct: 616 SMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIG 675
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
D + M+ EG + Y ++ L+++++ +A Y + M P
Sbjct: 676 NTDSAEVLFASMQ--SEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDAT 733
Query: 344 RSLKILGFC------VDGNVEDAKRC---------FDQMIEEGGVPNVVIYDCLIHAYCQ 388
+ G ++ N D + F +I +G P + Y+ +I + C+
Sbjct: 734 MHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCR 793
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ +A EL ++M+ G LP TF ++L G G G
Sbjct: 794 HNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSG 833
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 129/317 (40%), Gaps = 37/317 (11%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA 64
Q PD +I+ +I GL + RM++ + + P ++ +++D ++ D + A
Sbjct: 516 QVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDA 575
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R + + M G D Y ++KG C + + + + M+ G P+ Y TLI
Sbjct: 576 RKIF-EFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
K G + A + DM + PN VT++ LIC YC N +A VL S G P
Sbjct: 635 GYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFP 694
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE-----------------SG-EQGRLGKVKGGCR 222
+VV T ++ L + + A E +G R G + C
Sbjct: 695 NVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCS 754
Query: 223 FLKEMERKGCL-------------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+ +K L P + YN +I S C +L A+++ M G
Sbjct: 755 DTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLP 814
Query: 270 NFVTYDTLIRGLCSGGR 286
+ VT+ +L+ G S G+
Sbjct: 815 DPVTFLSLLYGFSSVGK 831
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 103/290 (35%), Gaps = 59/290 (20%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ +I+G ++ M+N+ V + + P + +++D K+ DI A F M
Sbjct: 594 YNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFL-CDM 652
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
M + + TYA L+ G C L M+S G+ PN V Y LI SL K K
Sbjct: 653 MKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKA 712
Query: 133 GRARSLMSDME----EPNDVTFSILI-----CAY-------------------------- 157
+A + M PND T L+ C Y
Sbjct: 713 IQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGL 772
Query: 158 -------------------CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
C+ L A+ L EK + G +PD VT +L SVG+
Sbjct: 773 ISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKS 832
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
L +Q + C+++ + + P D + ++ Y E
Sbjct: 833 GKWRSALPNEFQQDEFEII---CKYMTLLNQHVMSPVRDEVSRVLQLYAE 879
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 210/475 (44%), Gaps = 62/475 (13%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G + +TY +L+KGLC R+ ++L M RGV P+ YN +I CK+G+
Sbjct: 186 MVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGR 245
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + + ME P+D T++ILI C E+ A LL + GF P V+T T
Sbjct: 246 MKDALGIKALMERNGCNPDDWTYNILIYGLCGEKP-DEAEELLNDAIVRGFTPTVITFTN 304
Query: 188 VLELLCSVGRVMDAVEI----------------------------LEESGEQ-------- 211
++ C R+ DA+ + +E+ E
Sbjct: 305 IINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANG 364
Query: 212 ---------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
++GKV + ME +GC PN TY+ LI + L A+
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAM 424
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ M+ DGI+ +TY TLI+G C D+ ++ ++ME + G YN + +
Sbjct: 425 ALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMME--QNGLTPDEQAYNVLTH 482
Query: 317 GLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
L + + +EA +L + + + SL + GF GN + A ++M+ EG +
Sbjct: 483 ALCKSGRAEEAYSFLVRKGVVLTKVTYTSL-VDGFSKAGNTDFAAVLIEKMVNEGCKADS 541
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y L+ A C+++++ EA ++ +MT G + ++S + ++G A + E
Sbjct: 542 YTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNE 601
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I G P + Y+ I + C+ G + A L+ +M G+ PD +T+N +
Sbjct: 602 ---MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFI 653
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/524 (23%), Positives = 225/524 (42%), Gaps = 40/524 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G +A I+D ++ + N L+ + +++VL+K+
Sbjct: 297 PTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKET 356
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M A+G+ + Y ++ G C +VG ++ +M+ G +PN+ Y++LI+ L +
Sbjct: 357 VSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQ 416
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ +A +L++ M+E P +T++ LI CK+ NA L E G PD
Sbjct: 417 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 476
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKGGCRFLKEMERKG 231
+ LC GR +A L G + G +++M +G
Sbjct: 477 YNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 536
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C + TY++L+ + C+ L+ AL + + M + G+ N V Y +I + G+ D
Sbjct: 537 CKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAK 596
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
+ M S G K + Y + + Q +EA + +ME+ + P V ++ I
Sbjct: 597 SMFNEMISS--GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFIN 654
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE--------------- 394
G G ++ A +MI+ PN Y L+ + + V
Sbjct: 655 GCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELD 714
Query: 395 -ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+L++ M HG P A T++++++G C+ + A L + MR G+ P Y+
Sbjct: 715 TVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDH-MR--GKDISPNEEIYT 771
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LIK C+ F A + M+ G P +++ L++ L +
Sbjct: 772 MLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDE 815
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 209/459 (45%), Gaps = 35/459 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ ++I G + + ++ L+ P+ ++S++ L+ +D L +A
Sbjct: 367 PNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLI-QDQKLHKAMA 425
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G+ TY L++G C + + F+L +M+ G+ P+ YN L H+LC
Sbjct: 426 LITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALC 485
Query: 128 KNGKVGRARS-LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+G+ A S L+ VT++ L+ + K N A VL+EK + G D T +
Sbjct: 486 KSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYS 545
Query: 187 KVLELLCSVGRVMDAVEILEE---SG-------------EQGRLGKVKGGCRFLKEMERK 230
+L+ LC ++ +A+ IL++ SG E + GK EM
Sbjct: 546 VLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISS 605
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TY + ISSYC+ G ++ A + +M+ DG++ + VTY+ I G G +D
Sbjct: 606 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRA 665
Query: 291 LKILQLMEDS-------------KEGSKGRISPYNSV-LYGLYRENQQDEALEYLKQMEK 336
L+ M D+ K K + + V G++ + D + L++M K
Sbjct: 666 FSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVK 725
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L P AV S I GFC +E+A FD M + PN IY LI C + +
Sbjct: 726 HGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGK 785
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
A + +M G+ P +++ ++ GLC +G+ A L
Sbjct: 786 AVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSL 824
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 223/513 (43%), Gaps = 52/513 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD+ + +I GL + D + R TP++ F +I++ K E ID A
Sbjct: 263 PDDWTYNILIYGLCGEKPDEAEELLNDAIVR-GFTPTVITFTNIINGYCKAERIDDALRV 321
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M++S + D Y +L+ L R + + + M + G+ PN VIY ++I C
Sbjct: 322 -KTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYC 380
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GKVG A + ME PN T+S LI +++ L A+ L+ K G P V+
Sbjct: 381 KVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVI 440
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +++ C +A R + ME+ G P+ YN+L
Sbjct: 441 TYTTLIQGQCKKHEFDNAF-------------------RLFEMMEQNGLTPDEQAYNVLT 481
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C++G A + ++ + G+ VTY +L+ G G D +++ M + EG
Sbjct: 482 HALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN--EG 536
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
K Y+ +L L ++ + +EAL L QM + V ++ I +G + AK
Sbjct: 537 CKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAK 596
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F++MI G P+ Y I +YC+ ++ EA L+ EM G P T+N ++G
Sbjct: 597 SMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGC 656
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK-----ALCEKGGFQSASM------ 470
G + A ++ R I P Y L+K +L + ++ M
Sbjct: 657 GHMGYMDRAFSTLK---RMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIEL 713
Query: 471 -----LLVQMVGKGILPDYLTWNSLLICLSQQT 498
LL +MV G+ P +T++S++ + T
Sbjct: 714 DTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 746
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 141/333 (42%), Gaps = 52/333 (15%)
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+DA++ + G G ++ C L M GC N +Y ILI CET + AL
Sbjct: 127 AVDAIQAIRRVG-----GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALV 181
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ M DG S N TY LI+GLC GRI ++L+ M G + YN+++ G
Sbjct: 182 LLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM--PLRGVVPSVWTYNAMIDG 239
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED-AKRCFDQMIEEGGVPNV 376
+ + +AL ME+ D + IL + + G D A+ + I G P V
Sbjct: 240 YCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTV 299
Query: 377 VIYDCLIHAYCQEERV-----------------------------------REASELMKE 401
+ + +I+ YC+ ER+ +EA E + E
Sbjct: 300 ITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSE 359
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M +G P + +++ G C+ G VG AL +L+E + G P + YS LI
Sbjct: 360 MFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHE------GCRPNAWTYSSLIYG 413
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L + A L+ +M GI P +T+ +L+
Sbjct: 414 LIQDQKLHKAMALITKMQEDGITPGVITYTTLI 446
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 197/400 (49%), Gaps = 36/400 (9%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDVTFSILICAYCKEENL 163
M ++ +P+ ++ LI + + +A +M +E+ P+ ++ +I +CK +
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
+A +L++ GF PDVVT ++ C G++ A+++ EE
Sbjct: 61 ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEE---------------L 105
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
LK+ C P + TY ILI +Y G +D AL + ++M G+ + TY+ + RGLC
Sbjct: 106 LKD---NNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCK 162
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G++D + ++ + + G K + YN +L L + + DE +++ ++ P
Sbjct: 163 EGKVDRAFEFVRTL--NSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V S+ I C DG +E++ M E+G P+ YD LI A+C+E ++ A E +
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR----GSLPGSGHYSPLIK 457
M G+LP +NT+++ LC+ GN A+++ G+ G P Y+ ++
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEI-------FGKLDEVGCPPNVSSYNTMLS 333
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
AL G A ++ QM+ KGI PD +T+NSL+ CL +
Sbjct: 334 ALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRD 373
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 197/421 (46%), Gaps = 31/421 (7%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ D + Y ++ G C NR+ +L MK +G P+ V +N +I + C GK+ A
Sbjct: 41 KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100
Query: 138 LMSDMEEPND-----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
+ ++ + N+ +T++ILI AY E + AL LL++ S G PD T + L
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C G+V A E F++ + +GC P+V TYNIL+ + G
Sbjct: 161 CKEGKVDRAFE-------------------FVRTLNSRGCKPDVITYNILLRALLNQGKW 201
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D +++ G N VTY LI LC G+I++ + ++++M++ +G Y+
Sbjct: 202 DEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKE--KGLTPDAYCYD 259
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ RE + D A+E+L M + P V+ + + C +GN + A F ++ E
Sbjct: 260 PLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEV 319
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PNV Y+ ++ A A ++ +M G P T+N+++S LCR G V A
Sbjct: 320 GCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEA 379
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ L+ + + G + P Y ++ LC+ A +L M+ G P+ T+ L
Sbjct: 380 IGLLADMLSGRFQ---PNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLL 436
Query: 491 L 491
+
Sbjct: 437 I 437
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 188/417 (45%), Gaps = 25/417 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + VI G +A I D + R +P + N ++ K IDLA
Sbjct: 42 PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + + + TY IL++ L + + KLL M SRG++P++ YN + LC
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GKV RA R+L S +P+ +T++IL+ A + + + FS G P+VV
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + ++ LC G++ ++V +++ E+G R GK+ FL M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G LP++ YN ++++ C+ G D A+++F + G N +Y+T++ L S G
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
L ++ M +G + YNS++ L R+ DEA+ L M + P V
Sbjct: 342 YRALGMISQM--LSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYK 399
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+LG C ++DA MIE G PN Y LI +A EL +
Sbjct: 400 TVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 29/276 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + +I L R I + V ++ +TP ++ ++ +E +D+A F
Sbjct: 218 PNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEF 277
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+ G D Y +M LC ++ + G PN YNT++ +L
Sbjct: 278 L-DCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALW 336
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G RA ++S M +P+ +T++ LI C++ + A+ LL S F P++V
Sbjct: 337 SSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIV 396
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ VL LC R+ DA+E+L M GC PN TY +LI
Sbjct: 397 SYKTVLLGLCKAHRIDDAIEVL-------------------AAMIENGCQPNETTYTLLI 437
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+G A+++ N + I N ++ D+ R
Sbjct: 438 EGIGFSGSRTQAMELANSLYI----MNAISEDSFKR 469
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 6/145 (4%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLA 64
PP+ S + T++ L + D +A ++S+ + P + +NS++ L ++ +
Sbjct: 322 PPNVSSYNTMLSALWSS---GDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDE 378
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
M++ Q + +Y ++ GLC +R+ D ++L M G +PN Y LI
Sbjct: 379 AIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIE 438
Query: 125 SLCKNGKVGRARSLMSDMEEPNDVT 149
+ +G +A L + + N ++
Sbjct: 439 GIGFSGSRTQAMELANSLYIMNAIS 463
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 230/499 (46%), Gaps = 69/499 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD SIF +++ LGRA N+ ++F S+ D VK D+
Sbjct: 129 PDISIFNSLLTALGRAG---------------NLRGMTELFTSMRDASVKPDV------- 166
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSL 126
TY IL+ GLC + VGD K+L M S G V P+ I NT++ L
Sbjct: 167 -------------VTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGL 213
Query: 127 CKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G++ +A + + PN VT++ L A+C+ ++ A ++ + G P
Sbjct: 214 CKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAP 273
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+V+T+ ++ LC VGRV A+E E ++ + +G N TY+
Sbjct: 274 NVITMNTIIGGLCRVGRVGAALEFFRE--KRTVWPEARG---------------NAVTYS 316
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L S++ +D A+++F++M G + V Y T+I GL GR+ D M+
Sbjct: 317 TLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMK-- 374
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVE 358
K G K YN ++ G R+ + EA E L++M+ L P + + G C G+
Sbjct: 375 KAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFS 434
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
MI++G P+VV + L+H YC+ + EA + + M P +NT++
Sbjct: 435 AVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLI 494
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPLIKALCEKGGFQSASMLLVQMVG 477
LC+ V A+KL +E MR ++P + Y+ L+K L +K + A L+ +M
Sbjct: 495 DFLCKSREVDVAIKLFDE-MR---EKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMRE 550
Query: 478 KGILPDYLTWNSLLICLSQ 496
+ P+Y+T + L+ L +
Sbjct: 551 ERCTPNYVTVDVLMEWLPE 569
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 195/413 (47%), Gaps = 31/413 (7%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEEN 162
+ S P+ I+N+L+ +L + G + L + M + P+ VT+ IL+ CK +
Sbjct: 122 LASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGH 181
Query: 163 LVNALVLLEKSFSFG--FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
+ +AL +L++ S G PD+ + V++ LC +GR+ A+ ++E R+ V G
Sbjct: 182 VGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDE-----RMRHVHG- 235
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
C PN TYN L ++C G + A + M+ +G++ N +T +T+I G
Sbjct: 236 -----------CAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGG 284
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
LC GR+ L+ + ++G Y+++ N D A+E +M
Sbjct: 285 LCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHR 344
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P AV I G G + DA M + G + Y+ LI +C+++++ EA EL
Sbjct: 345 PDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYEL 404
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++EM G G P T+NT+LSGLC+ G+ +L+ I G P + L+
Sbjct: 405 LEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGH---MIDDGCQPSVVTFGTLVHG 461
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM 509
C+ G A + M I P+ + +N+L+ +C S++ + + L +EM
Sbjct: 462 YCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVD-VAIKLFDEM 513
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D + P++ I++ L+ A + +R +EL M P T+ +L+GLC+
Sbjct: 120 DSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKS 179
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG--KGILP 482
G+VG ALK+++ M G P + ++ LC+ G Q A + + + + G P
Sbjct: 180 GHVGDALKVLDR-MSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAP 238
Query: 483 DYLTWNSL 490
+ +T+N L
Sbjct: 239 NAVTYNCL 246
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P F T++ G +A ++ ++ + + P+ I+N+++D L K ++D+A
Sbjct: 450 PSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKL 509
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M V + TY L+KGL F+L+ M+ PN V + L+ L
Sbjct: 510 F-DEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLP 568
Query: 128 KNGKVGRARSLMSDMEEPND 147
+ G+ R + M ++ ++
Sbjct: 569 EIGETERLKCFMQQRDQKDN 588
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 226/483 (46%), Gaps = 37/483 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDL 63
I+ P+ F V+ RA + + ++ ++ + + P L I N+ + VLV + +D
Sbjct: 165 IERRPE--AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDK 222
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A F ++M ++ + TY L+KG C +R+ D +L+ M +G P+ + Y T++
Sbjct: 223 AVRFL-ERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVM 281
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LCK ++ R LM M + P+ VT++ + K + AL L ++ F
Sbjct: 282 GFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF 341
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
D V + ++ C GR+ A EI + EM KGC+P+V T
Sbjct: 342 RVDKVGYSAIVHSFCREGRMDKAKEI-------------------VNEMFSKGCIPDVVT 382
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y +I+ C+ +D A + M G N V+Y L+ GLC G + L+ ++M
Sbjct: 383 YTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG---NSLEAREMMN 439
Query: 299 DSKEGSK-GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
S+E Y+ +++G RE + EA + +++M K FP V+ +L I C +
Sbjct: 440 MSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V++AKR +Q + G NVV + +IH +CQ++ + A L+ +M P T+
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T++ L ++G + A KL M+ + G +P Y +I C G + LL +M
Sbjct: 560 TIIDALGKKGRIEEATKLA---MKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM 616
Query: 476 VGK 478
+ +
Sbjct: 617 LSR 619
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 222/467 (47%), Gaps = 28/467 (5%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
++ ++L++L K + + M ++ + +M ++ + ++L +M
Sbjct: 136 VYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMM 195
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
+ G++P+ I NT IH L ++ +A + M+ EPN +T++ LI YC L
Sbjct: 196 QKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRL 255
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--------- 214
+A+ L+ + G PD ++ V+ LC R+ + ++E+ + L
Sbjct: 256 EDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNT 315
Query: 215 --------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
G FL+E E + + Y+ ++ S+C G +D A ++ N+M G
Sbjct: 316 FVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ VTY ++I GLC ++D K+L+ M K G K Y ++L GL + E
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQM--YKHGCKPNTVSYTALLNGLCKNGNSLE 433
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A E + E+ P A+ S+ + GF +G +A +MI++G P V + LI
Sbjct: 434 AREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQ 493
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+ CQEE+V EA M++ +G F TV+ G C++ ++ AL L+ +DM +
Sbjct: 494 SLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL-DDMYLSNKH 552
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I AL +KG + A+ L ++M+ G++P +T+ +++
Sbjct: 553 --PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVI 597
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 186/394 (47%), Gaps = 35/394 (8%)
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALV 168
+ + ++Y ++ L K A+ ++ M E F ++ +Y + L NA+
Sbjct: 131 RHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR 190
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
+L G PD+ + +L R+ AV RFL+ M+
Sbjct: 191 VLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAV-------------------RFLERMQ 231
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
PNV TYN LI YC+ L+ A+++ +M G S + ++Y T++ LC RI
Sbjct: 232 IVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIK 291
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSL 346
+ +++ M +++ YN+ ++ L + DEALE+L++ E+ R V S
Sbjct: 292 EVRLLMEKMLKDSNLLPDQVT-YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 350
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ FC +G ++ AK ++M +G +P+VV Y +I+ CQE +V +A +++++M HG
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 407 YLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
P ++ +L+GLC+ GN A + + EED +P + YS L+ +G
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW------WIPNAITYSVLMHGFRREG 464
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A L+ +M+ KG P + N L+ L Q+
Sbjct: 465 KSSEACDLVREMIKKGFFPTPVEINLLIQSLCQE 498
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 34/383 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M + G D TY ++ GLC +V K+L M G KPN+V Y L++ LCKNG
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG 429
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
AR +M+ EE PN +T+S+L+ + +E A L+ + GF P V I
Sbjct: 430 NSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 489
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC +V +A RF+++ GC NV + +I +
Sbjct: 490 LLIQSLCQEEKVDEAK-------------------RFMEQCLNNGCAVNVVNFTTVIHGF 530
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ L++AL + +DM + + VTY T+I L GRI++ K+ M+ + G
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKL--AMKMLRVGLIP 588
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK---ILGFCVDGNVEDAKRC 363
Y +V++ R + + + LK +EK+ R R+ I C GN+E A +
Sbjct: 589 TPVTYRTVIHQYCRMGRVE---DLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKL 645
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+++ + LI +Y + + + M +P V L
Sbjct: 646 LGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 705
Query: 424 QGNVGTALKLVEEDMRGIGRGSL 446
+G A KL+ +R + RG +
Sbjct: 706 EGKSEEADKLI---LRFVERGRI 725
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F TVI G + + + D + N P + + +I+D L K+ KM+
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 582
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ TY ++ C RV D KLL M SR + YN +I LC G +
Sbjct: 583 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLE 640
Query: 134 RARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A L+ + + + T +LI +Y + + + + + F+ +PD+ KV
Sbjct: 641 QAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVS 700
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLG 215
+ L G+ +A +++ E+GR+
Sbjct: 701 KKLMLEGKSEEADKLILRFVERGRIS 726
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 194/409 (47%), Gaps = 38/409 (9%)
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
L ++ + + M+ G KPN V YNT+IH G + AR ++ M EP+
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+ LI CKE L A L +K G VP+ VT +++ C+ G + A
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFS----- 299
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ EM +KG +P+V TYN+L+ + G + A D+ +M+ GI
Sbjct: 300 --------------YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 345
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQ 324
+ +TY+ LI G G + M SKG I P Y S++Y L R N+
Sbjct: 346 PDAITYNILINGYSRCGNAKRAFDLHNEML-----SKG-IEPTHVTYTSLIYVLSRRNRM 399
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
EA + +++ + + P + + I G C +GNVE A +M + P+ V ++ L
Sbjct: 400 KEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 459
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ C+E +V EA L+ EM G P ++NT++SG R+G++ A V ++M IG
Sbjct: 460 MQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFX-VRDEMLSIG 518
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ LIK LC+ A LL +MV KGI PD T+ SL+
Sbjct: 519 FN--PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLI 565
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 171/374 (45%), Gaps = 62/374 (16%)
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
GF P+VV+ ++ G R G ++G R L M KG P+
Sbjct: 202 LGFKPNVVSYNTIIH------------------GYSSR-GNIEGARRILDAMRVKGIEPD 242
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TY LIS C+ G L+ A +F+ M G+ N VTY+TLI G C+ G ++
Sbjct: 243 SYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
M K+G +S YN +++ L+ E + EA + +K+M K + P A+ ++ I G+
Sbjct: 303 EM--VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 354 DGN-----------------------------------VEDAKRCFDQMIEEGGVPNVVI 378
GN +++A F++++++G P+V++
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
++ +I +C V A L+KEM P TFNT++ G CR+G V A L++E M
Sbjct: 421 FNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDE-M 479
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL-SQQ 497
+ RG P Y+ LI +G + A + +M+ G P LT+N+L+ CL Q
Sbjct: 480 K--XRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQ 537
Query: 498 TTWLLLLLLNEMVS 511
L LL EMV+
Sbjct: 538 EGDLAEELLKEMVN 551
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 173/372 (46%), Gaps = 33/372 (8%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G++ D YTY L+ G+C R+ + L M G+ PN+V YNTLI C G
Sbjct: 234 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 293
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ RA S +M + P+ T+++L+ A E + A ++++ G +PD +T
Sbjct: 294 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 353
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ R G K EM KG P TY LI
Sbjct: 354 LI-------------------NGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLS 394
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ A D+F + G+S + + ++ +I G C+ G ++ +L+ M D K
Sbjct: 395 RRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM-DRKSVPPDE 453
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
++ +N+++ G RE + +EA L +M+ + P + + I G+ G+++DA D
Sbjct: 454 VT-FNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRD 512
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+ G P ++ Y+ LI C+ + A EL+KEM G P ST+ +++ G+ G
Sbjct: 513 EMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM---G 569
Query: 426 NVGTALKLVEED 437
NV T LVE++
Sbjct: 570 NVDT---LVEDN 578
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 155/331 (46%), Gaps = 27/331 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + ++I G+ + + + D + + P+ +N+++D + DL RAF
Sbjct: 241 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG-DLERAFS 299
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR +M+ G+ TY +L+ L + R+G+ ++ M+ +G+ P+++ YN LI+
Sbjct: 300 YRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYS 359
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G RA L ++M EP VT++ LI + + A L EK G PDV+
Sbjct: 360 RCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVI 419
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+++ C+ G V A + LKEM+RK P+ T+N L+
Sbjct: 420 MFNAMIDGHCANGNVERAFML-------------------LKEMDRKSVPPDEVTFNTLM 460
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C G ++ A + ++MK GI + ++Y+TLI G G I D + M G
Sbjct: 461 QGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSI--G 518
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ YN+++ L + + D A E LK+M
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVL-----VKED 60
PD + +I G R + +A DL + + P+ + S++ VL +KE
Sbjct: 346 PDAITYNILINGYSRC---GNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 402
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
DL +K++ GV D + ++ G C V F LL M + V P+ V +N
Sbjct: 403 DDLF-----EKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFN 457
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TL+ C+ GKV AR L+ +M+ +P+ ++++ LI Y + ++ +A + ++ S
Sbjct: 458 TLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSI 517
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
GF P ++T +++ LC ++G L + LKEM KG P+
Sbjct: 518 GFNPTLLTYNALIKCLC--------------KNQEGDLAE-----ELLKEMVNKGISPDD 558
Query: 237 DTYNILI 243
TY LI
Sbjct: 559 STYLSLI 565
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/473 (26%), Positives = 222/473 (46%), Gaps = 41/473 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARA 66
P+ + VI GL +A I D +K + +S + P+ + ++D L K + D +
Sbjct: 141 PNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 200
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F ++M+ G D TY L+ G +++ + KLL VM ++G +P +V Y +++H
Sbjct: 201 F--EQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGF 258
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK + A+ +++ M EP F+ L+ Y + A +L + + G PDV
Sbjct: 259 CKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 318
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ T +++LL S GRV +A + + M KGC P+ TY +
Sbjct: 319 ILYTSLIDLLFSTGRVPEARHVFD-------------------SMIEKGCAPDALTYGTI 359
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I ++ + G +++A ++ M G+ + Y++L+ G R+D + M S
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS-- 417
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVED 359
G K +N +++GL+++ + D A K+M E++ P V ++ I G G V +
Sbjct: 418 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSE 477
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F +MI+ G +P Y LI++ + R+ EA +L+++M G P ++ +++
Sbjct: 478 AFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALIT 537
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
GL V TA + +E M+ RG P Y L + GF++A L
Sbjct: 538 GLIDSSMVDTAWDVFQEMMK---RGCAPNEVTYKVL------RRGFRAAGRAL 581
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 224/486 (46%), Gaps = 35/486 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAFYRKK 71
+ TVI+GL ++ I++ + + + +P++ + +++D L+K D + F ++
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNF--EE 168
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M S TY +++ GLC + D K+ M +G P+++ Y TLI K K
Sbjct: 169 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 228
Query: 132 VGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ AR L+ M EP VT+ ++ +CK + + A ++ + G P + T
Sbjct: 229 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 288
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L S GR +A ++L EM +GC P+V Y LI
Sbjct: 289 LLSYYLSKGRAEEAYQVL-------------------TEMTARGCAPDVILYTSLIDLLF 329
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
TG + A VF+ M G + + +TY T+I+ G ++ +IL+LM +K G
Sbjct: 330 STGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELM--AKSGVGPD 387
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
YNS++ G + + D+A +M + P AV ++ + G DG + A F
Sbjct: 388 CFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFK 447
Query: 366 QMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+M+E+ VP +V Y LI + RV EA +EM G +P T+ +++ L +
Sbjct: 448 EMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKA 507
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A KLV EDM +G P YS LI L + +A + +M+ +G P+
Sbjct: 508 GRIPEAKKLV-EDMVKLGVN--PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNE 564
Query: 485 LTWNSL 490
+T+ L
Sbjct: 565 VTYKVL 570
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 196/434 (45%), Gaps = 37/434 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
+Y ++ GL +++ + +K + M G +P+ + + TLIH CK G+ L++
Sbjct: 9 SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQA 68
Query: 143 EE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ ++ +I YCK +L ++ + DV++ T V++ L R+
Sbjct: 69 LKRFRPDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKGLADSKRID 125
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A E+ EE G + G+++ G + +EM C+P TY ++I
Sbjct: 126 EACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVI 185
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ +L A VF M G + +TY TLI G ++D+ K+L +M +G
Sbjct: 186 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM--LTKG 243
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG-----FCVDGNVE 358
+ Y S+++G + + +EA E + QM + R + L I + G E
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE---RGCEPGLFIFTSLLSYYLSKGRAE 300
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A + +M G P+V++Y LI RV EA + M G P A T+ T++
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTII 360
Query: 419 SGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ GNV A +++E + G+G P Y+ L+ + A + +MV
Sbjct: 361 QNFSKIGNVEAAGEILELMAKSGVG----PDCFAYNSLMDGYVKLERVDQAFGVYDRMVA 416
Query: 478 KGILPDYLTWNSLL 491
GI P+ +T+N L+
Sbjct: 417 SGIKPNAVTFNVLM 430
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 220/502 (43%), Gaps = 49/502 (9%)
Query: 9 PDESIFITVIRGLGRA-------RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
PD F T+I G +A +++N +K RF P + ++ S++ K
Sbjct: 40 PDVIAFTTLIHGFCKAGQPQVGHKLLNQALK------RFR--PDVFLYTSVIHGYCKAG- 90
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
DL ++R + + D +Y ++KGL + R+ + +L +K+ G PN V Y
Sbjct: 91 DLDTGYFRAVTPKASL--DVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTA 148
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I L K G++ +M P T++++I CK + L +A + E+ G
Sbjct: 149 VIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
VPD +T T +++ ++ +A ++L+ M KG P
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKLLDV-------------------MLTKGPEPTAV 249
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY ++ +C+ +++ A +V M+ G + +L+ S GR ++ ++L M
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
+ G + Y S++ L+ + EA M + P A+ I F G
Sbjct: 310 --TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIG 367
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
NVE A + M + G P+ Y+ L+ Y + ERV +A + M G P A TFN
Sbjct: 368 NVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFN 427
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPLIKALCEKGGFQSASMLLVQ 474
++ GL + G A L +E + + +P + Y+ LI L + G A + +
Sbjct: 428 VLMHGLFKDGKTDRAFSLFKEMLE---KEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQE 484
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M+ +GI+P+ T+ SL+ L++
Sbjct: 485 MIDRGIIPECHTYTSLIYSLAK 506
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 164/368 (44%), Gaps = 21/368 (5%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
EP V+++ +I + + A G PDV+ T ++ C G+ +
Sbjct: 4 EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHK 63
Query: 204 ILEESGEQGR------LGKVKGGCR-------FLKEMERKGCLPNVDTYNILISSYCETG 250
+L ++ ++ R + G C+ + + + K L +V +Y +I ++
Sbjct: 64 LLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL-DVISYTTVIKGLADSK 122
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+D A ++F ++K G S N V Y +I GL GRI+DGLK + M S +
Sbjct: 123 RIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS--CVPTRTT 180
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y V+ GL + +A + +QM + P + + I GF +++A++ D M+
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+G P V Y ++H +C+ + + EA E++ +M G P F ++LS +G
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A +++ E RG P Y+ LI L G A + M+ KG PD LT+
Sbjct: 301 EAYQVLTE---MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357
Query: 489 SLLICLSQ 496
+++ S+
Sbjct: 358 TIIQNFSK 365
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 24/223 (10%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M SGV D + Y LM G RV F + M + G+KPN+V +N L+H L K+GK
Sbjct: 379 MAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGK 438
Query: 132 VGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
RA SL +M E P V+++ILI K + A + ++ G +P+ T T
Sbjct: 439 TDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYT 498
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ L GR+ +A +++E +M + G P+V Y+ LI+
Sbjct: 499 SLIYSLAKAGRIPEAKKLVE-------------------DMVKLGVNPDVQAYSALITGL 539
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
++ ++D+A DVF +M G + N VTY L RG + GR D
Sbjct: 540 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALD 582
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 135/327 (41%), Gaps = 69/327 (21%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC P + +YN +IS +D A FN M +G + + + TLI G C G+ G
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 291 LKIL-QLME--------------------DSKEGSKGRISP--------YNSVLYGLYRE 321
K+L Q ++ D G ++P Y +V+ GL
Sbjct: 62 HKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADS 121
Query: 322 NQQDEALEY--------------------------------LKQMEKL-----FPRAVDR 344
+ DEA E LK E++ P
Sbjct: 122 KRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ I G C + DA + F+QM+++G VP+ + Y LI + + ++ EA +L+ M
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P A T+ +++ G C+ + A +++ + MR RG PG ++ L+ KG
Sbjct: 242 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQ-MR--ERGCEPGLFIFTSLLSYYLSKGR 298
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +L +M +G PD + + SL+
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLI 325
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 224/475 (47%), Gaps = 37/475 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKM 72
F V+ RA + + ++ ++ + + P L I N+ + VLV + +D A F ++M
Sbjct: 235 FGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFL-ERM 293
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
++ + TY L+KG C +R+ D +L+ M +G P+ + Y T++ LCK ++
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
R LM M + P+ VT++ + K + AL L ++ F D V +
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR+ A EI + EM KGC+P+V TY +I+ C
Sbjct: 414 IVHSFCREGRMDKAKEI-------------------VNEMFSKGCIPDVVTYTSVINGLC 454
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS--K 305
+ +D A + M G N V+Y L+ GLC G + L+ ++M S+E
Sbjct: 455 QERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG---NSLEAREMMNMSEEDWWIP 511
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
I+ Y+ +++G RE + EA + +++M K FP V+ +L I C + V++AKR
Sbjct: 512 NAIT-YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRF 570
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+Q + G NVV + +IH +CQ++ + A L+ +M P T+ T++ L +
Sbjct: 571 MEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGK 630
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+G + A KL M+ + G +P Y +I C G + LL +M+ +
Sbjct: 631 KGRIEEATKLA---MKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 682
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 208/432 (48%), Gaps = 28/432 (6%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
+ +M ++ + ++L +M+ G++P+ I NT IH L ++ +A + M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ EPN +T++ LI YC L +A+ L+ + G PD ++ V+ LC R+
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353
Query: 199 MDAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ ++E+ + L G FL+E E + + Y+
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++ S+C G +D A ++ N+M G + VTY ++I GLC ++D K+L+ M K
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM--YK 471
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G K Y ++L GL + EA E + E+ P A+ S+ + GF +G +
Sbjct: 472 HGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSE 531
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A +MI++G P V + LI + CQEE+V EA M++ +G F TV+
Sbjct: 532 ACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIH 591
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
G C++ ++ AL L++ DM + P Y+ +I AL +KG + A+ L ++M+ G
Sbjct: 592 GFCQKDDLEAALSLLD-DMYLSNKH--PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVG 648
Query: 480 ILPDYLTWNSLL 491
++P +T+ +++
Sbjct: 649 LIPTPVTYRTVI 660
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 183/390 (46%), Gaps = 41/390 (10%)
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
F ++ +Y + L NA+ +L G PD+ + +L R+ AV
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAV------ 287
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
RFL+ M+ PNV TYN LI YC+ L+ A+++ +M G S
Sbjct: 288 -------------RFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCS 334
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ ++Y T++ LC RI + +++ M +++ YN+ ++ L + DEAL
Sbjct: 335 PDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVT-YNTFVHMLSKHGHGDEAL 393
Query: 329 EYLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E+L++ E+ R V S + FC +G ++ AK ++M +G +P+VV Y +I+
Sbjct: 394 EFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGL 453
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGR 443
CQE +V +A +++++M HG P ++ +L+GLC+ GN A + + EED
Sbjct: 454 CQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDW----- 508
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ-----QT 498
+P + YS L+ +G A L+ +M+ KG P + N L+ L Q +
Sbjct: 509 -WIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEA 567
Query: 499 TWLLLLLLN-----EMVSFVMVVHELSAKE 523
+ LN +V+F V+H K+
Sbjct: 568 KRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 597
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 34/383 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M + G D TY ++ GLC +V K+L M G KPN+V Y L++ LCKNG
Sbjct: 433 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG 492
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
AR +M+ EE PN +T+S+L+ + +E A L+ + GF P V I
Sbjct: 493 NSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 552
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC +V +A RF+++ GC NV + +I +
Sbjct: 553 LLIQSLCQEEKVDEAK-------------------RFMEQCLNNGCAVNVVNFTTVIHGF 593
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ L++AL + +DM + + VTY T+I L GRI++ K+ M+ + G
Sbjct: 594 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKL--AMKMLRVGLIP 651
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK---ILGFCVDGNVEDAKRC 363
Y +V++ R + + + LK +EK+ R R+ I C GN+E A +
Sbjct: 652 TPVTYRTVIHQYCRMGRVE---DLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKL 708
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+++ + LI +Y + + + M +P V L
Sbjct: 709 LGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 768
Query: 424 QGNVGTALKLVEEDMRGIGRGSL 446
+G A KL+ +R + RG +
Sbjct: 769 EGKSEEADKLI---LRFVERGRI 788
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F TVI G + + + D + N P + + +I+D L K+ KM+
Sbjct: 586 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 645
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ TY ++ C RV D KLL M SR + YN +I LC G +
Sbjct: 646 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLE 703
Query: 134 RARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A L+ + + + T +LI +Y + + + + + F+ +PD+ KV
Sbjct: 704 QAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVS 763
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLG 215
+ L G+ +A +++ E+GR+
Sbjct: 764 KKLMLEGKSEEADKLILRFVERGRIS 789
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/505 (25%), Positives = 225/505 (44%), Gaps = 27/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + + V D + P++ +FN+++D K
Sbjct: 288 PNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI 347
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M++ + T LM+G C ++++ L + S G+ + +++H LCK
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407
Query: 129 NGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A + ++S P+D+ ++L+C CK+ + A L + G VT
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 467
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G++ +A I++E E+G GKV+G R +EM
Sbjct: 468 SNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMT 527
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++G P++ TYN L+ C G LD A+ ++++ K G+ N TY ++ G C RI+
Sbjct: 528 KRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIE 587
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
D + + K + YN ++ + AL+ L+ M+ + P S
Sbjct: 588 DVENLFNELLSKKMELNSIV--YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C G VEDAK D+M +EG VPNVV Y LI YC+ ++ A EM
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFN 705
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ ++ G C+ GN+ A L+ ++ G +P Y+ L C+
Sbjct: 706 IHPNKFTYTVMIDGYCKLGNMEKANNLL---IKMKESGIVPDVVTYNVLTNGFCKANDMD 762
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
+A + QM +G+ D +T+ +L+
Sbjct: 763 NAFKVCDQMATEGLPVDEITYTTLV 787
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/564 (23%), Positives = 242/564 (42%), Gaps = 80/564 (14%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ T R LG + V L++R PSLK N L LVK + + + ++
Sbjct: 157 VYSTQFRNLG----FSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKAN-EFEKCCEVFRV 211
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
M+ G D +++ ++ LC ++ + +L M+ G+ PN V YN +I+ LC+NG++
Sbjct: 212 MSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRL 271
Query: 133 GRARSLMSDME---------------------------------------EPNDVTFSIL 153
A L M PN V F+ L
Sbjct: 272 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNL 331
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
I YCK N+ AL + + S P VT+ +++ C ++ A LEE G
Sbjct: 332 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 391
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ + RF K M + P+ +L+ C+ G A +
Sbjct: 392 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 451
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
++ + G + VT + LI GLC G++ + +I++ M + + RI+ YN+++ G
Sbjct: 452 LWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE-RGLPMDRIT-YNALILG 509
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
E + + ++M K + P + + G C G ++DA + +D+ G + N
Sbjct: 510 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 569
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ Y ++ YC+ R+ + L E+ + +N ++ C+ GNV AL+L+
Sbjct: 570 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLL- 628
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
E+M+ +G LP YS LI +C G + A L+ +M +G +P+ + + +L+ C
Sbjct: 629 ENMK--SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 686
Query: 494 L-----SQQTTWLLLLLLNEMVSF 512
+ ++TWL EM+SF
Sbjct: 687 KLGQMDTAESTWL------EMISF 704
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 210/470 (44%), Gaps = 61/470 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLAR-- 65
P+ +F +I G + I +K D++ N+TP+ S++ K D I+ A
Sbjct: 323 PNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENA 382
Query: 66 -------------------------------AF-YRKKMMASGVQGDDYTYAILMKGLCL 93
AF + K M++ + D +L+ GLC
Sbjct: 383 LEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK 442
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PND-VT 149
+ + +L + +G + V N LIH LC GK+ A ++ +M E P D +T
Sbjct: 443 DGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRIT 502
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ LI +C E + L E+ G PD+ T +L LC+VG++ DA+++ +E
Sbjct: 503 YNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFK 562
Query: 210 EQGRLGKV-------KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G + + +G C+ E+ K N YNI+I ++C+ G +
Sbjct: 563 ASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVA 622
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+AL + +MK GI N TY +LI G+C+ G ++D ++ M KEG + Y +
Sbjct: 623 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR--KEGFVPNVVCYTA 680
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + Q D A +M + P ++ I G+C GN+E A +M E G
Sbjct: 681 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 740
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS-TFNTVLSG 420
VP+VV Y+ L + +C+ + A ++ +M G LP+ T+ T++ G
Sbjct: 741 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEG-LPVDEITYTTLVHG 789
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 147/294 (50%), Gaps = 22/294 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P D + +I G + + + +++ + P + +N +L L +D A
Sbjct: 497 PMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIK 556
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + ASG+ + +TY I+M+G C NR+ D L + + S+ ++ NS++YN +I +
Sbjct: 557 LW-DEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+NG V A L+ +M+ PN T+S LI C + +A L+++ GFVP+V
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675
Query: 183 VTITKVLELLCSVGRVMDA----VEILEESGEQGR------------LGKVKGGCRFLKE 226
V T ++ C +G++ A +E++ + + LG ++ L +
Sbjct: 676 VCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIK 735
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
M+ G +P+V TYN+L + +C+ +D+A V + M +G+ + +TY TL+ G
Sbjct: 736 MKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 218/482 (45%), Gaps = 67/482 (13%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYR 69
+ F ++IR G A + + +K + ++PS+ FNS+L +++K +A+ +
Sbjct: 165 DRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFD 224
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ + GV D YT+ IL++G C+ + V +GF M P+ V YNTL+ LC+
Sbjct: 225 EMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRA 284
Query: 130 GKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GKV A +++ M + PN VT++ LI YC ++++ AL LL + S G P+ +
Sbjct: 285 GKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKI 344
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ LC ++ EILE G V G G +P+ T N LI
Sbjct: 345 TYNTLIQGLCEAQKLDKIKEILE--------GMVGDG----------GFIPDTCTLNTLI 386
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK-- 301
++C G L+ A VF M + + TY L+R LC G + + + +
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 302 ---EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
G K ++ YN + EYL C +G +
Sbjct: 447 LHDVGCKPLVAAYNPM-------------FEYL--------------------CSNGKTK 473
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A+R F Q+++ G + Y LI +C+E +L+ M ++P A T+ ++
Sbjct: 474 KAERVFRQLMKR-GTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMI 532
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GL ++G+ A K +E+ ++ LP + + ++ AL EKG ++ L+ M+ +
Sbjct: 533 DGLLKKGDPVLAHKSLEKMLKS---SHLPTTAIFHSILAALVEKGCAHESASLVKLMLER 589
Query: 479 GI 480
I
Sbjct: 590 RI 591
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 200/460 (43%), Gaps = 50/460 (10%)
Query: 60 DIDLAR--AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+++ AR F +K V+ D + L++ + K+ MK GV P+ V
Sbjct: 142 NLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVV 201
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEK 172
+N+L+ + K G+ A+ L +M + P+ TF+ILI +C + ++
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG- 231
F PDVVT +++ LC R GKVK +K M +K
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLC-------------------RAGKVKIAHNVVKGMVKKSP 302
Query: 232 -CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
PNV TY LI YC + AL + +M G+ N +TY+TLI+GLC ++D
Sbjct: 303 NLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKI 362
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYREN----QQDEALEYLKQMEKLF--PRAVDR 344
+IL+ M G G I P L L + + + +EA ++M +L P +
Sbjct: 363 KEILEGM----VGDGGFI-PDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATY 417
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEE-------GGVPNVVIYDCLIHAYCQEERVREASE 397
S+ + C G+ A+ FD++ E+ G P V Y+ + C + ++A
Sbjct: 418 SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAER 477
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
+ +++ G S + T++ G CR+G L+ +R R +P + Y +I
Sbjct: 478 VFRQLMKRGTQDPPS-YKTLILGHCREGTPEAGFDLLVLMLR---RDFVPDAETYGLMID 533
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L +KG A L +M+ LP ++S+L L ++
Sbjct: 534 GLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEK 573
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 226/517 (43%), Gaps = 71/517 (13%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
+++ R M ++ + A R P + N +++ L++ ID+A A YR +
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRH-LKRL 221
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI----------------- 118
G+ +DYTY I +K LC + + M+ GV PN+V
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 119 ------------------YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
Y +I C K+ A + DM P+ + LI A
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
YCK NL+ A+ L S G + V ++ +L+ LC +G + V+ +E + G
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGI--- 398
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
FL E+ YNI++ + C+ G ++ A+++ N+MK +S + V Y T
Sbjct: 399 ------FLDEV----------LYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTT 442
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
LI G C G++ D + + M++ G + I YN ++ G R + EALE L +
Sbjct: 443 LIAGYCLQGKLVDAKNMFEEMKE--RGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGT 500
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ L P + + I G C+ G V++A+ F +E+ + N Y ++ YC+ R+
Sbjct: 501 QGLKPNSATHNRIIEGLCMAGKVKEAE-AFLNTLEDKCLEN---YSAMVDGYCKANFTRK 556
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A EL ++ G L + +LS LC +G AL L+E R + P Y
Sbjct: 557 AYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE---RMLALDVEPNQIMYGK 613
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LI A C G + A ++ +V +GI PD +T+ ++
Sbjct: 614 LIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMI 650
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 203/444 (45%), Gaps = 33/444 (7%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
+L+K + L K RG P+ + N L++ L ++GK+ A ++ ++
Sbjct: 162 MLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV--- 198
PND T+ I I A C++ N A+ + + G P+ VT + +E LCS R
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 199 MDAVEILEESGEQ----GRLGKVKGGCRFLK---------EMERKGCLPNVDTYNILISS 245
+A+ L + ++G C +K +M +G P+ Y LI +
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC+ G L A+ + NDM +GI N V ++++ LC G + + + DS G
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDS--GIF 399
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRC 363
YN V+ L + + +EA+E L +M+ ++ V + I G+C+ G + DAK
Sbjct: 400 LDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNM 459
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F++M E G P++V Y+ L+ + + +EA EL+ + G P ++T N ++ GLC
Sbjct: 460 FEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCM 519
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G V A E + + L +YS ++ C+ + A L ++ +GIL
Sbjct: 520 AGKVKEA----EAFLNTLEDKCLE---NYSAMVDGYCKANFTRKAYELFSRLSKQGILVK 572
Query: 484 YLTWNSLL--ICLSQQTTWLLLLL 505
+ LL +C+ + L+LL
Sbjct: 573 KKSCFKLLSSLCMEGEYDKALILL 596
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 212/489 (43%), Gaps = 44/489 (8%)
Query: 8 PPDESIFITVIRGLGRA-RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PD I+ +I +A ++ V D+VS + + I +SIL L + +
Sbjct: 329 APDGYIYGALIHAYCKAGNLLQAVALHNDMVSN-GIKTNCVIVSSILQCLCEMGMASEVV 387
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+ SG+ D+ Y I++ LC +V + +LL+ MK R + + V Y TLI
Sbjct: 388 DQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGY 447
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C GK+ A+++ +M+E P+ VT++IL+ + + AL LL+ + G P+
Sbjct: 448 CLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 507
Query: 183 VTITKVLELLCSVGRVMDA---VEILEESGEQGRLGKVKGGCR---------FLKEMERK 230
T +++E LC G+V +A + LE+ + V G C+ + ++
Sbjct: 508 ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQ 567
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G L + L+SS C G D AL + M + N + Y LI C G +
Sbjct: 568 GILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRA 627
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
+ ++ + G + Y ++ G R N EA + M++ R + +
Sbjct: 628 QLVFDML--VERGITPDVITYTMMINGYCRVNCLREARDIFNDMKE---RGIKPDVITYT 682
Query: 351 FCVDGNVE--------------------DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+DG+ + DA + +M E G P+VV Y LI ++C+
Sbjct: 683 VVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTN 742
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGS 449
+++A L EM G P T+ +LS C +G++ A+ LV E +GI S S
Sbjct: 743 NLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMS 802
Query: 450 GHYSPLIKA 458
+ ++KA
Sbjct: 803 VLHRGILKA 811
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 181/421 (42%), Gaps = 56/421 (13%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTY 84
RM DVV T L++ + + L +D F ++M G++ D TY
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKL--------------VDAKNMF--EEMKERGIEPDIVTY 475
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
IL+ G + +LL + ++G+KPNS +N +I LC GKV A + ++ +E+
Sbjct: 476 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 535
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+S ++ YCK A L + G + + K+L LC G A+ +
Sbjct: 536 KCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALIL 595
Query: 205 LEE------SGEQGRLGKVKGG-CR---------FLKEMERKGCLPNVDTYNILISSYCE 248
LE Q GK+ G CR + +G P+V TY ++I+ YC
Sbjct: 596 LERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCR 655
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L A D+FNDMK GI + +TY ++ G K+ M S + SKG
Sbjct: 656 VNCLREARDIFNDMKERGIKPDVITYTVVLDGHS---------KVNLKMARSLQFSKG-- 704
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
E ++ +A + +M+++ P V ++ I C N++DA +D+
Sbjct: 705 -----------SEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDE 753
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MI G P++V Y L+ + C + A L+ EM+ G P + + + G+ +
Sbjct: 754 MIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARK 813
Query: 427 V 427
V
Sbjct: 814 V 814
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 38/288 (13%)
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK-ILQLMEDSKEGSKG------- 306
A F +K G N TY LIR LC R++ L+ +L + SKE G
Sbjct: 80 AWSFFTQLKESGFQHNVDTYAALIRVLCR-WRLERKLQSLLSEIVGSKESVLGFDITALF 138
Query: 307 ---------RISPYNSVLY--------GLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
++SVL R DEA++ L Q ++ P + +
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G ++ A + + G PN Y I A C++ EA ++ +EM G
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258
Query: 408 LPIASTFNTVLSGLC--RQGNVGTALKLVEEDMRGIGRGSLP-GSGHYSPLIKALCEKGG 464
P A T +T + GLC ++ ++G E +R + + P + Y+ +I+ C +
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGY------EALRALRAANWPIDTFAYTAVIRGFCSEMK 312
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL-NEMVS 511
+ A + + MV +GI PD + +L+ + L + L N+MVS
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 183/374 (48%), Gaps = 30/374 (8%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVL 169
P+ + Y LI + C VG+A L+ +M +P+ VT+++L+ CKE L A+
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
L S+G P+V+T +L +CS GR MDA + L EM R
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAE-------------------KLLTEMVR 114
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
KGC P+V T+NILI+ C G+L A+D+ M G + N ++Y+ L+ G C ++D
Sbjct: 115 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDR 174
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
++ L++M G I YN++L L ++ + D A+E L Q+ P + +
Sbjct: 175 AIQYLEIM--VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTV 232
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G G + A +M +G P+V+ Y LI +E +V EA + ++ G G
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGV 292
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P A T+N+++ GLC+ A+ + I +G P Y+ LI+ + +G +
Sbjct: 293 KPNAFTYNSIMFGLCKAQQTDRAIDFLA---YMISKGCKPTEVSYTILIEGIANEGLAKE 349
Query: 468 ASMLLVQMVGKGIL 481
A LL ++ +G++
Sbjct: 350 ALELLNELCSRGVV 363
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 178/363 (49%), Gaps = 27/363 (7%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D TY IL++ C + VG KLL M SRG KP+ V YN L++ +CK G++ A +
Sbjct: 15 DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74
Query: 140 SDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+ M +PN +T +I++ + C ++A LL + G P VVT ++ LC
Sbjct: 75 NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + A++ILE +M GC PN +YN L+ +C+ +D A
Sbjct: 135 GLLGRAIDILE-------------------KMPTHGCTPNSLSYNPLLHGFCKEKKMDRA 175
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ M G + VTY+T++ LC G++D +++L + S +G + YN+V+
Sbjct: 176 IQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL--SSKGCSPVLITYNTVI 233
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL + + D+A+E L +M + L P + S I G +G VE+A + F + G
Sbjct: 234 DGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVK 293
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN Y+ ++ C+ ++ A + + M G P ++ ++ G+ +G AL+L
Sbjct: 294 PNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALEL 353
Query: 434 VEE 436
+ E
Sbjct: 354 LNE 356
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 187/415 (45%), Gaps = 60/415 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +I + +K D + P + +N +++ + KE +D A F
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M + G Q + T+ I+++ +C T R D KLL M +G P+ V +N LI+ LC
Sbjct: 74 LNS-MPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC 132
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G +GRA ++ M PN ++++ L+ +CKE+ + A+ LE S G PD+V
Sbjct: 133 RKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIV 192
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L LC G+V AVE+ L ++ KGC P + TYN +I
Sbjct: 193 TYNTMLTALCKDGKVDAAVEL-------------------LNQLSSKGCSPVLITYNTVI 233
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ G D A+++ ++M+ G+ + +TY +LI GL G++++ +K +E G
Sbjct: 234 DGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGF--G 291
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
K YNS+++GL + Q D A+++L
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLA------------------------------- 320
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
MI +G P V Y LI E +EA EL+ E+ G + +S V+
Sbjct: 321 --YMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 180/370 (48%), Gaps = 27/370 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ +T++ILI A C E + A+ LL++ S G PDVVT ++ +C GR+ +A+
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI-- 71
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+FL M G PNV T+NI++ S C TG A + +M
Sbjct: 72 -----------------KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVR 114
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G S + VT++ LI LC G + + IL+ M G YN +L+G +E +
Sbjct: 115 KGCSPSVVTFNILINFLCRKGLLGRAIDILEKM--PTHGCTPNSLSYNPLLHGFCKEKKM 172
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
D A++YL+ M +P V + + C DG V+ A +Q+ +G P ++ Y+ +
Sbjct: 173 DRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTV 232
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I + + +A EL+ EM G G P T++++++GL R+G V A+K D+ G G
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH-DVEGFG 291
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWL 501
P + Y+ ++ LC+ A L M+ KG P +++ L+ ++ +
Sbjct: 292 VK--PNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKE 349
Query: 502 LLLLLNEMVS 511
L LLNE+ S
Sbjct: 350 ALELLNELCS 359
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 173/334 (51%), Gaps = 28/334 (8%)
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
+L++ PDV+T T ++E C+ V A+++L+E G
Sbjct: 3 VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGS------------------ 44
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+GC P+V TYN+L++ C+ G LD A+ N M G N +T++ ++R +CS GR
Sbjct: 45 -RGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWM 103
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
D K+L M ++G + +N ++ L R+ A++ L++M P ++ +
Sbjct: 104 DAEKLLTEM--VRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNP 161
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ GFC + ++ A + + M+ G P++V Y+ ++ A C++ +V A EL+ +++ G
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P+ T+NTV+ GL + G A++L+ E MR G+G P YS LI L +G +
Sbjct: 222 CSPVLITYNTVIDGLSKVGKTDQAVELLHE-MR--GKGLKPDVITYSSLIAGLSREGKVE 278
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
A + G G+ P+ T+NS++ +C +QQT
Sbjct: 279 EAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQT 312
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 55/335 (16%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP S S P+ ++R + D K + R +PS+ FN +++ L ++
Sbjct: 77 MP-SYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKG 135
Query: 61 IDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ L RA +KM G + +Y L+ G C ++ + L +M SRG P+ V Y
Sbjct: 136 L-LGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
NT++ +LCK+GKV A L++ + S G
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLS-------------------------------SKGCS 223
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P ++T V++ L VG+ AVE+L E M KG P+V TY
Sbjct: 224 PVLITYNTVIDGLSKVGKTDQAVELLHE-------------------MRGKGLKPDVITY 264
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ LI+ G ++ A+ F+D++ G+ N TY++++ GLC + D + L M
Sbjct: 265 SSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYM-- 322
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+G K Y ++ G+ E EALE L ++
Sbjct: 323 ISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 196/418 (46%), Gaps = 35/418 (8%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-EEPN 146
++GL + +L+H + G P + N LI LC +G+V A ++ +
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSAT 127
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
+T++ ++ YC+ N+ A +++ S F PD T ++ LC G V+DA+ + +
Sbjct: 128 IITYNTMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALAVFD 184
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+M +GC P+V TY+IL+ + C+ A+ + ++M+ G
Sbjct: 185 -------------------DMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKG 225
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ VTY+ LI +CS G + + LK+L + G K Y VL L + +E
Sbjct: 226 CEPDIVTYNVLINAMCSQGDVGEALKVLNSL--PSYGCKPDAVTYTPVLKSLCSSERWEE 283
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A + L +M P V + I C G V A + QM E G P+++ Y ++
Sbjct: 284 ADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMD 343
Query: 385 AYCQEERVREA----SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
C+E RV EA EL+ EM +P TFNT+++ LC++G A+K+V+E
Sbjct: 344 GLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSE- 402
Query: 441 IGRGSLPGSGHYSPLIKA-LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G +P Y+ ++ LC+ + A LL MV G+ PD T+ SL LS++
Sbjct: 403 --HGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSRE 458
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 199/410 (48%), Gaps = 24/410 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M S+ PD + +IR L + D + D + +PS+ ++ +LD KE
Sbjct: 150 MIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKES 209
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+M + G + D TY +L+ +C VG+ K+L+ + S G KP++V Y
Sbjct: 210 GYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYT 269
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
++ SLC + + A L++ M P++VTF+ +I + C++ + A +L +
Sbjct: 270 PVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEH 329
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PD++T + +++ LC RV +A+++L+E L EM K C+P+
Sbjct: 330 GCTPDIITYSSIMDGLCKERRVDEAIKLLKE---------------LLAEMVSKNCIPDQ 374
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG-LCSGGRIDDGLKILQ 295
T+N +I+S C+ G+ D A+ V ++M G + TY+ ++ G LC + ++ L +L
Sbjct: 375 VTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLN 434
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
LM G + Y S+ +GL RE++ + A+ ++++ L P + + +LG C
Sbjct: 435 LM--VSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCK 492
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ A F M+ G +P+ Y L+ E + EA EL+ ++
Sbjct: 493 KWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 197/425 (46%), Gaps = 38/425 (8%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A G TY ++ G C R G+ ++ S P++ YN LI +LC G V
Sbjct: 121 ALGPSATIITYNTMVNGYC---RAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVL 177
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A ++ DM P+ VT+SIL+ A CKE A+VLL++ S G PD+VT ++
Sbjct: 178 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLI 237
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+CS G V +A+++L + GC P+ TY ++ S C +
Sbjct: 238 NAMCSQGDVGEALKVL-------------------NSLPSYGCKPDAVTYTPVLKSLCSS 278
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ A + M + + + VT++ +I LC G + K+L M S+ G I
Sbjct: 279 ERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQM--SEHGCTPDII 336
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM------EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
Y+S++ GL +E + DEA++ LK++ + P V + I C G + A +
Sbjct: 337 TYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKV 396
Query: 364 FDQMIEEGGVPNVVIYDCLIHAY-CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
D+M E G +P++ Y+C++ + C+ + EA +L+ M +G P +T+ ++ GL
Sbjct: 397 VDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLS 456
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R+ + A+ + R G P Y+ ++ LC+K A MV G +P
Sbjct: 457 REDEMERAIGMFR---RVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMP 513
Query: 483 DYLTW 487
D T+
Sbjct: 514 DESTY 518
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+RGL G +D L+++ + S G + P N ++ L + + +A + +E L
Sbjct: 68 LRGLVQRGELDGALRLVHSISGS--GKDPAVIPCNILIKKLCADGRVADAE---RVVEAL 122
Query: 338 FPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P A + + + G+C GN++ A+R D + P+ Y+ LI A C V +A
Sbjct: 123 GPSATIITYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLDA 179
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+ +M G P T++ +L C++ A+ L++E MR +G P Y+ L
Sbjct: 180 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDE-MRS--KGCEPDIVTYNVL 236
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
I A+C +G A +L + G PD +T+ +L L W
Sbjct: 237 INAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERW 281
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 208/469 (44%), Gaps = 70/469 (14%)
Query: 35 DLVSRFNM-------TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL 87
+LVS FN PS+ F IL LVK + ++M +G+ D +IL
Sbjct: 54 NLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSIL 113
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---- 143
+ + F +L + G +PN + TLI LC G++ +A +
Sbjct: 114 INCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGF 173
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
N V++ LI CK AL LL + P+VV +++ +C V V +A +
Sbjct: 174 HLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFD 233
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ E M KG P+V TYN LIS +C G + A D+FN M
Sbjct: 234 LYSE-------------------MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMI 274
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ I+ N T++ L+ G C R+ + +L +M K+G K + YNS++
Sbjct: 275 FENINPNVYTFNILVDGFCKERRLKEAKNVLAMM--MKQGIKPDVFTYNSLM-------- 324
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
DR +C+ V AK F+ + + G PN+ Y +I
Sbjct: 325 -------------------DR------YCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMI 359
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIG 442
H +C+ ++V EA L KEM + +P T+N+++ GLC+ G + ALKLV+E RG+
Sbjct: 360 HGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 419
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ Y+ ++ ALC+ A LL +M +GI PD T+ +L+
Sbjct: 420 HDKIT----YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLV 464
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 203/434 (46%), Gaps = 27/434 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ T+I+GL I+ ++ D V + + ++++ L K A
Sbjct: 140 PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL 199
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++ VQ + Y ++ +C V + F L M S+G+ P+ V YN LI C
Sbjct: 200 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCI 259
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A L + M PN TF+IL+ +CKE L A +L G PDV T
Sbjct: 260 VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFT 319
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C V V A I + ++G PN+ +Y+I+I
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNT-------------------ISQRGVNPNIHSYSIMIH 360
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ +D A+++F +M + I + VTY++LI GLC G+I LK++ M D G
Sbjct: 361 GFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHD--RGV 418
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
YNS+L L + +Q D+A+ L +M E + P + + G C +G +EDA+
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F+ ++ +G + +V IY +I +C E+ +L+ +M +G +P A T+ ++ L
Sbjct: 479 VFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLF 538
Query: 423 RQGNVGTALKLVEE 436
+ A KL+ E
Sbjct: 539 DKDENDKAEKLLRE 552
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 205/429 (47%), Gaps = 31/429 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G + + T L+KGLCL ++ + + + G N V Y TLI+ LCK G
Sbjct: 132 KILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVG 191
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A L+ ++ +PN V ++ +I + CK + + A L + S G PDVVT
Sbjct: 192 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYN 251
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C VG++ DA ++ + M + PNV T+NIL+ +
Sbjct: 252 ALISGFCIVGKMKDATDLFNK-------------------MIFENINPNVYTFNILVDGF 292
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ L A +V M GI + TY++L+ C ++ I + S+ G
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTI--SQRGVNP 350
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I Y+ +++G + + DEA+ K+M + P V + I G C G + A +
Sbjct: 351 NIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLV 410
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M + G + + Y+ ++ A C+ +V +A L+ +M G P T+ T++ GLC+
Sbjct: 411 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKN 470
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A ++V ED+ + +G + Y+ +I+ C G F + LL +M G +P+
Sbjct: 471 GRLEDA-RIVFEDL--LVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNA 527
Query: 485 LTWNSLLIC 493
+T+ ++IC
Sbjct: 528 VTY-EIIIC 535
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 191/405 (47%), Gaps = 64/405 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLAR 65
P+ ++ T+I + + +++N+ +++VS+ ++P + +N+++ +V + D
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYNALISGFCIVGKMKDATD 268
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F KM+ + + YT+ IL+ G C R+ + +L +M +G+KP+ YN+L+
Sbjct: 269 LF--NKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDR 326
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C +V +A+ + + + + PN ++SI+I +CK + + A+ L ++ +PD
Sbjct: 327 YCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPD 386
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VVT +++ LC +LGK+ + + EM +G + TYN
Sbjct: 387 VVTYNSLIDGLC-------------------KLGKISYALKLVDEMHDRGVPHDKITYNS 427
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
++ + C+ +D A+ + MK +GI + TY TL+ GLC GR++D + + +
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE--DLLV 485
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+G ++ Y +++ G DE+L+ L +ME
Sbjct: 486 KGYILDVNIYTAMIQGFCSHGLFDESLDLLSKME-------------------------- 519
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
E G +PN V Y+ +I + ++ +A +L++EM G
Sbjct: 520 -------ENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 24/281 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
P+ F ++ G + R + + ++ + + P + +NS++D LVKE ++ A+
Sbjct: 280 PNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE-VNKAKH 338
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + GV + ++Y+I++ G C +V + L M + P+ V YN+LI L
Sbjct: 339 IFNT-ISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGL 397
Query: 127 CKNGKVGRARSLMSDMEE---PND-VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK GK+ A L+ +M + P+D +T++ ++ A CK + A+ LL K G PD+
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRL-------GKVKGGCR---------FLKE 226
T T +++ LC GR+ DA + E+ +G + ++G C L +
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
ME GC+PN TY I+I S + D A + +M G+
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 226/488 (46%), Gaps = 52/488 (10%)
Query: 89 KGLCLTNRVGDGFKLLHV--------------MKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+GL LT RV + L+ M +RGV P+S Y +I C+NG V
Sbjct: 203 QGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLE 262
Query: 135 ARSLMSDMEEP----NDVTFSILICAYCKEENLVN-ALVLLEKSFSFGFVPDVVTITKVL 189
A + +M E ++ T +++I A+C E++LVN A+ K G P+++ + ++
Sbjct: 263 ADRWICEMMERGFVVDNATLTLIITAFC-EKSLVNRAVWFFHKVTKMGLSPNLINYSSMI 321
Query: 190 ELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR----------FLKEMERKGC 232
LC G V A E+LEE + G + G C+ FLK +
Sbjct: 322 SGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 381
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV TY +IS YC+ L A +F MK G+ N TY TLI G C G +
Sbjct: 382 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 441
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILG 350
+++LM S EG YNS++ GL + + +EA + L ++ V ++ I
Sbjct: 442 LMELM--SNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE 499
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C ++ A ++M + G P++ +Y LI A+C++ ++++ +L E+ G P
Sbjct: 500 QCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 559
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ +++ G CR+ V A+K + + G P S Y LI LC++ A
Sbjct: 560 KETYTSMICGYCREKKVSLAVKFFQ---KMSDHGCAPDSISYGALISGLCKESRLDEARQ 616
Query: 471 LLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL--LNEMVSFVMVVHELSAK---E 523
L M+ KG+ P +T +L C ++ +++L LN+ + ++ VH L K E
Sbjct: 617 LYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKL-WIRTVHTLIRKLCCE 675
Query: 524 KRCKLRSL 531
K+ L +L
Sbjct: 676 KKVALAAL 683
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%), Gaps = 22/281 (7%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARA-FYRKKMMASGVQGDDYTYAILMKGLCLT 94
L+ N P++ + +++ KE+ L+RA ++M G+ + TY L+ G C
Sbjct: 375 LIRSDNYKPNVHTYTAMISGYCKEE-KLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKA 433
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS----DMEEPNDVTF 150
++L+ +M + G PN+ YN+++ LCK G+ A L++ + E + VT+
Sbjct: 434 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 493
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ILI CK ++ ALV L K F GF PD+ T ++ C + D+ ++ +E +
Sbjct: 494 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIK 553
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G R KV +F ++M GC P+ +Y LIS C+ LD
Sbjct: 554 LGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDE 613
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
A +++ M G+S VT TL C + IL+
Sbjct: 614 ARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE 654
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 142/303 (46%), Gaps = 12/303 (3%)
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C++ R + VE + G +GK+K + +M +G + N +I E ++
Sbjct: 168 CNLERAHEVVECM--VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLV 225
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK-ILQLMEDSKEGSKGRISPY 311
+ A +VF++M G+ + TY +I G C G + + + I ++ME G +
Sbjct: 226 EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMME---RGFVVDNATL 282
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
++ ++ + A+ + ++ K L P ++ S I G C G+V+ A ++M++
Sbjct: 283 TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 342
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASEL-MKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G PNV + LIH C++ A L +K + Y P T+ ++SG C++ +
Sbjct: 343 NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 402
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L E R +G +P + Y+ LI C+ G F A L+ M +G P+ T+N
Sbjct: 403 RAEMLFE---RMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYN 459
Query: 489 SLL 491
S++
Sbjct: 460 SIV 462
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 174/428 (40%), Gaps = 64/428 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + ++I GL + + + + + + P++ S++ L K+ RAF
Sbjct: 312 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWT-ERAFR 370
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ K + + + + +TY ++ G C ++ L MK +G+ PN+ Y TLI
Sbjct: 371 LFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGH 430
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G +A LM M PN T++ ++ CK A LL F D
Sbjct: 431 CKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADG 490
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T ++ EQ + + FL +M + G P++ Y L
Sbjct: 491 VTYTILI-------------------SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 531
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+++C ++ + +F+++ G++ TY ++I G C ++ +K Q M D
Sbjct: 532 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD--H 589
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G Y +++ GL +E++ DE A++
Sbjct: 590 GCAPDSISYGALISGLCKESRLDE---------------------------------ARQ 616
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+D MI++G P V L + YC+ E A +++ + ++ T +T++ LC
Sbjct: 617 LYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWI---RTVHTLIRKLC 673
Query: 423 RQGNVGTA 430
+ V A
Sbjct: 674 CEKKVALA 681
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD ++ T+I R M+ D K D V + + P+ + + S++ +E + LA F
Sbjct: 523 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 582
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +KM G D +Y L+ GLC +R+ + +L M +G+ P V TL + C
Sbjct: 583 F-QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYC 641
Query: 128 KNGKVGRARSLMSDMEEPNDV-TFSILICAYCKEENLVNALVLLEK 172
K A ++ + + + T LI C E+ + A + K
Sbjct: 642 KTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHK 687
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 219/474 (46%), Gaps = 35/474 (7%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+ IL LVK LAR + KM+ SGV D+Y Y ++ C + + L+ M+
Sbjct: 167 SQILFSLVKIRQFALARDLF-DKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRME 225
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
S GVK ++V YN L++ LCKN +V A + + M ++VT+ L+ +C+ E L
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV------- 217
AL + GFVP + +++ L V +A + + G+ G + V
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345
Query: 218 ---------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
R KEM +G PN TY ILI + C+ G+++ AL +F+ M+ GI
Sbjct: 346 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 405
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
Y++LI G C G +D +L M KEG + Y+ ++ GL R +
Sbjct: 406 VTVYPYNSLINGYCKQGSLDRARGLLSGM--VKEGLTPTAASYSPLIAGLCRNGDLSSCM 463
Query: 329 EYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E ++M + + + L GFC D +++A R FD+MI+ +PN V ++ +I Y
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---EEDMRGIGR 443
C +R+A +L +M G P T+ +++SGLC V A + V E +
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
SL + L+ +G F L +M +G+ D +++ ++ +Q
Sbjct: 584 FSL------TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 230/536 (42%), Gaps = 57/536 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE + T++ G R + ++ T + R PS + ++D L K+++ + AF
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL-VEEAFSL 325
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+ G+ + + Y L+ LC R D +L M RG++PN V Y LIH+LCK
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385
Query: 129 NGKVGRARSLMSDMEEPN-DVT---FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M + VT ++ LI YCK+ +L A LL G P +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+ ++ LC G + +E+ E E+G + K+ R +M
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+PN T+N++I YC G + A +++ M G+ + TY +LI GLC +
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ + +E+S ++LYG +RE + E +M + S I
Sbjct: 566 KANEFVADLENSYAVLNN--FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTI 623
Query: 349 LGFCVDGNVEDAKRC--FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ + + K C F +M E+G P+ + Y C+I A +EE + +A +M G
Sbjct: 624 IVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG 683
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG-------------------------- 440
Y P T +++ LC+ G +G+A L +E + G
Sbjct: 684 YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK 743
Query: 441 -----IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G L ++ LIK LC+ G Q A L+ ++ G PD +++++++
Sbjct: 744 DLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 228/543 (41%), Gaps = 96/543 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E + +I L + MI D + D + + ++ +NS+++ K+ +D AR
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+ G+ +Y+ L+ GLC + +L M RG+ N+ + LI+ C
Sbjct: 431 L-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 489
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ K+ A L M + PN+VTF+++I YC N+ A L ++ G PD
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESG----------------EQGRLGK-------- 216
T ++ LC V A E LE S +GR +
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609
Query: 217 -VKG-----------------------GCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
V+G C +EM+ +G P+ Y +I + + +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
AL+ ++ M +DG S N VT+ LI LC G + +L+ KE G + P N
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA----ELL--CKEMLAGNVLP-N 722
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
Y + L+Y F +G++E AK M++ G
Sbjct: 723 KFTYNCF--------LDY--------------------FATEGDMEKAKDLHSAMLQ-GH 753
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+ ++V ++ LI C+ +++EA +LM ++T G+ P +++T++ LC+ G++ A +
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFE 813
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
L E + +G P Y+ I+ G A + M+ G+ P++ T+ +LL
Sbjct: 814 LWNEMLY---KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870
Query: 493 CLS 495
+S
Sbjct: 871 GIS 873
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 205/435 (47%), Gaps = 28/435 (6%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
++ +A +++ S + D + Y ++ G C NR+ ++L+ MK+RG P+ V YN
Sbjct: 118 NIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNI 177
Query: 122 LIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I SLC K+G A L+ D P +T++ILI A E + A+ LLE+ + G
Sbjct: 178 MIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 237
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
+PD+ T ++ +C G V A E++ +G GK G
Sbjct: 238 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGE 297
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ + EM +GC PN TY+ILISS C G +D A+ V M ++ + +YD LI L
Sbjct: 298 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 357
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FP 339
C GR+D + I+ M + G I YN++L L + ++ALE ++ + P
Sbjct: 358 CKEGRLDLAIGIMDYMISN--GCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 415
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ I G+ A MI +G P+ + Y+ LI C++ V EA L+
Sbjct: 416 NVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLL 475
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+M G+ P ++N VL GLC+ + A+ + E I +G P Y LI+ +
Sbjct: 476 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAE---MIEKGCRPNETTYILLIEGI 532
Query: 460 CEKGGFQSASMLLVQ 474
G+++ +M L
Sbjct: 533 -GFAGWRTEAMELAN 546
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 238/500 (47%), Gaps = 49/500 (9%)
Query: 77 VQGDDYTYAILMKGL---CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+Q D+ LMK L C + + L + ++G P+ ++ LI +
Sbjct: 61 LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE 120
Query: 134 RARSLMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+A +M +E EP+ ++ +I +CK + A +L + + GF+PD+VT ++
Sbjct: 121 KASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIG 180
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
LC+ ++ A+++L++ + C+P V TY ILI + G
Sbjct: 181 SLCNRRKLGLALKVLDQ-------------------LLLDNCMPTVITYTILIEATIVEG 221
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
++ A+ + +M G+ + TY+ +IRG+C G ++ +++ + + +G K +
Sbjct: 222 GINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL--TSKGCKPDVIS 279
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN +L + + DE + + +M P V S+ I C G +++A MI
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E+ P+ YD LI A C+E R+ A +M M +G LP +NT+L+ LC+ GN
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 399
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL++ + +RG+ G P Y+ +I AL G A ++ M+ KG+ PD +T+N
Sbjct: 400 QALEIFNK-LRGM--GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYN 456
Query: 489 SLLICLSQQ-TTWLLLLLLNEM---------VSFVMVVHELSAKEKRCKLRSLNH-LAHG 537
SL+ CL + + LL++M +S+ +V+ L CK+R ++ +
Sbjct: 457 SLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL------CKVRRIDDAIGMF 510
Query: 538 AGSVWLGLRIHDTTHTFIID 557
A + G R ++TT+ +I+
Sbjct: 511 AEMIEKGCRPNETTYILLIE 530
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 154/312 (49%), Gaps = 25/312 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
IN+ +K + + + P + +N+I+ + KE + A + + G + D +Y I
Sbjct: 223 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L++ + +G KL+ M SRG +PN V Y+ LI SLC+ G++ A S++ M E
Sbjct: 283 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 342
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ ++ LI A CKE L A+ +++ S G +PD+V +L LC G A+
Sbjct: 343 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 402
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
EI K++G GC PNV +YN +IS+ G AL + M
Sbjct: 403 EI---------FNKLRG----------MGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 443
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G+ + +TY++LI LC G +++ + +L ME S G + + YN VL GL +
Sbjct: 444 ISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS--GFRPTVISYNIVLLGLCKVR 501
Query: 323 QQDEALEYLKQM 334
+ D+A+ +M
Sbjct: 502 RIDDAIGMFAEM 513
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 243/532 (45%), Gaps = 67/532 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKK 71
+ T+++GL A + + ++ +++ + P + + +++ L K D A+ R+
Sbjct: 94 VHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLRE- 151
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC-KNG 130
M+A G D T++ L+ GLC F++L + RG+ + + T+I LC K
Sbjct: 152 MVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYN 211
Query: 131 KVGRARSLM----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V A ++ + P + F+++I +CK ++L +A LLE G VP+V T T
Sbjct: 212 SVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFT 271
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ LC RV +A ++LE+ M GC PNV TY+ +I+
Sbjct: 272 ILITGLCKANRVGEAQQLLEK-------------------MVMGGCSPNVVTYSTVINGL 312
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G +D A ++F M+ N VT++ LI GLC RI++ ++ M ++ G
Sbjct: 313 CKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRET--GCAP 370
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKL---FPRAVDRSLKILGFCVDGNVEDAKRC 363
I YNS++ GL + Q DEA + + + + AV S G+ G + DA R
Sbjct: 371 DIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRI 430
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F ++++G P++ Y LI YC+ R E EL++EM G+ P +T + VL GL
Sbjct: 431 FSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFE 490
Query: 424 QGNVGTALKLVE--------ED-------MRGIGRGSL--------------------PG 448
+ A++L + +D + G+ R S P
Sbjct: 491 GNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPS 550
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
S L+++LC+ G A LL +M +G ++N LL LS+ W
Sbjct: 551 SSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRW 602
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 222/487 (45%), Gaps = 62/487 (12%)
Query: 11 ESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFY 68
++ F T+I+ L + + K +V TP++ +FN +++ K +D+D A
Sbjct: 196 DAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLL 255
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M+ G + +T+ IL+ GLC NRVG+ +LL M G PN V Y+T+I+ LCK
Sbjct: 256 -EVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCK 314
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+V A L ME PN VT +ILI CK + + A L + G PD++T
Sbjct: 315 QGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIIT 374
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFLKEM 227
+++ LC +V +A ++ + E G LG++ CR +
Sbjct: 375 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSML 434
Query: 228 ERKGCLPNVDTYNILISSYCET--------------------------GVL--------- 252
KG P++ TY LI YC+T VL
Sbjct: 435 VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHT 494
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS-KGRISPY 311
+ A+ +F+ M G + + + Y+ ++ G+ + D L +L+ + D ++ S
Sbjct: 495 ERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAV 554
Query: 312 NSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIE 369
++++ L + + D+A + L +M E+ F AV ++L G ++A + F+ M+
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P + + +I C +V +A EL++ M+ G P T NT++ G C+ G
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 674
Query: 430 ALKLVEE 436
A KL+EE
Sbjct: 675 ARKLLEE 681
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/563 (23%), Positives = 231/563 (41%), Gaps = 103/563 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++ L +A ++ + P F++++D L K +
Sbjct: 124 PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRV 183
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLT-NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++ G+ D + +++ LC N V K+L V+ ++G P +++N +I+ C
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + A L+ M E PN TF+ILI CK + A LLEK G P+VV
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + V+ LC G+V DA E+ + MER+ C PNV T+NILI
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQL-------------------MERRNCPPNVVTHNILI 344
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ ++ A +++ M+ G + + +TY++LI GLC ++D+ ++ Q + +S
Sbjct: 345 DGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVS 404
Query: 304 SKGRISPYNSVLYGLYRENQQDEA-----------------------LEYLKQ------- 333
+ ++ Y+++ +G + +A LEY K
Sbjct: 405 AANAVT-YSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 463
Query: 334 ------MEKLFPRAVDRSLKILGFCVDGN-VEDAKRCFDQMIEEGGVPNVVIY------- 379
K FP V+ +LG +GN E A + FD M G + +IY
Sbjct: 464 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGM 523
Query: 380 -------------------------------DCLIHAYCQEERVREASELMKEMTGHGYL 408
D L+ + CQ + +A +L+ +M+ G+
Sbjct: 524 ARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFA 583
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
S++N +LSGL R A ++ E + G P + +I LC A
Sbjct: 584 AAVSSYNRLLSGLSRLQRWDEATQVFEA---MVSAGPAPEISTVNVVISWLCSAAKVDDA 640
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L+ +M G PD T N+L+
Sbjct: 641 YELVQRMSKLGCCPDIETCNTLI 663
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 205/459 (44%), Gaps = 49/459 (10%)
Query: 50 NSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N LD+L + + A A +R M A + +TY IL++G + +LL MK
Sbjct: 26 NCALDMLCRLNRRQEALALFRNAM-ARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMK 84
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLV 164
S G + N+V++ TL+ LC G+V A R++ D P+ +T++ L+ A CK
Sbjct: 85 SSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCA-PDVMTYTALVHALCKAGKFD 143
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A +L + + G PD VT + +++ LC G A +LE+ ++G
Sbjct: 144 EAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRG------------ 191
Query: 225 KEMERKGCLPNVDT-YNILISSYC-ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+ N D + +I C + ++ A V + G + + ++ +I G C
Sbjct: 192 --------MGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
+D K+L++M ++G + + ++ GL + N+ EA + L++M P
Sbjct: 244 KAKDLDSAYKLLEVM--IEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPN 301
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V S I G C G V+DA F M PNVV ++ LI C+ +R+ EA +L
Sbjct: 302 VVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYH 361
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG-------HYS 453
M G P T+N+++ GLC+ V A +L + ++P SG YS
Sbjct: 362 RMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQ---------TIPESGVSAANAVTYS 412
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
L G A + +V KG PD T+ SL++
Sbjct: 413 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLIL 451
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 187/387 (48%), Gaps = 34/387 (8%)
Query: 120 NTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N + LC+ + A R+ M+ + PN T+ ILI + +L A+ LLE+ S
Sbjct: 26 NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
GF + V T +++ LC GRV++A+E K C P+
Sbjct: 86 SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA--------------------KDCAPD 125
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY L+ + C+ G D A + +M G + + VT+ TLI GLC G + ++L+
Sbjct: 126 VMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLE 185
Query: 296 LMEDSKEGSKGRISPYNSVLYGL-YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
+ + G + + +++ L + N + A + L + + P + +L I GFC
Sbjct: 186 --DVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+++ A + + MIE+G VPNV + LI C+ RV EA +L+++M G P
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T++TV++GLC+QG V A +L + R R P ++ LI LC+ + A L
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMER---RNCPPNVVTHNILIDGLCKAKRIEEARQLY 360
Query: 473 VQMVGKGILPDYLTWNSLL--ICLSQQ 497
+M G PD +T+NSL+ +C S Q
Sbjct: 361 HRMRETGCAPDIITYNSLIDGLCKSFQ 387
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 181/401 (45%), Gaps = 30/401 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + TVI GL + ++D + L+ R N P++ N ++D L K + I+ AR
Sbjct: 300 PNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQL 359
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP-NSVIYNTLIHSL 126
Y + M +G D TY L+ GLC + +V + F+L + GV N+V Y+TL H
Sbjct: 360 YHR-MRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGY 418
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G++ A + S + + P+ T++ LI YCK V + L+E+ S GF P V
Sbjct: 419 AALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRV 478
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRFLKEMERKGCL-- 233
T++ VL L A+++ + +G V+G R K + L
Sbjct: 479 NTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQ 538
Query: 234 ----------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
P+ + L+ S C+ G D A + + M G + +Y+ L+ GL
Sbjct: 539 VIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSR 598
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRA 341
R D+ ++ + M + G IS N V+ L + D+A E +++M KL P
Sbjct: 599 LQRWDEATQVFEAMVSA--GPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDI 656
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ I G+C G + A++ ++M E G PN +D L
Sbjct: 657 ETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 130/300 (43%), Gaps = 42/300 (14%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV + N + C AL +F + N TY LIRG S G +D +++L
Sbjct: 21 NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-LFPRAVDRSLKILGFCV 353
+ M+ S G +G + +++ GL + EALE+ + M K P + + + C
Sbjct: 81 EEMKSS--GFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCK 138
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC------QEERVRE------------- 394
G ++A+ +M+ +G P+ V + LI C Q RV E
Sbjct: 139 AGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAA 198
Query: 395 -----------------ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
AS+++ + G+ P FN V++G C+ ++ +A KL+E
Sbjct: 199 FETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLE-- 256
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
I +G +P ++ LI LC+ A LL +MV G P+ +T+++++ L +Q
Sbjct: 257 -VMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQ 315
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P S ++ L + +D + +S ++ +N +L L + + D A
Sbjct: 549 PSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQV 608
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M+++G + T +++ LC +V D ++L+ M G P+ NTLI C
Sbjct: 609 F-EAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYC 667
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILIC 155
K+G+ AR L+ +M EPND T +L C
Sbjct: 668 KSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 699
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 207/420 (49%), Gaps = 32/420 (7%)
Query: 85 AILMKGLCLTNRVG---DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
A LMK L + R G + L + S+G KP+ V+ LI + + +A +M
Sbjct: 63 AHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEI 122
Query: 142 ME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+E +P+ +++ +I + K + +A + ++ S GF PDVVT ++ LCS G++
Sbjct: 123 LETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKL 182
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
A E+++E + + GC P+V TY ILI + G ++ AL++
Sbjct: 183 ELAFEVMDE-------------------LLKDGCKPSVITYTILIEATILEGRINEALEL 223
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
F+++ G+ + TY+ +IRG+C G D L ++ + S G + YN +L
Sbjct: 224 FDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL--SARGCNPDVVSYNILLRSF 281
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+++ ++ +K M P V S+ I FC +G V +A + M E+G P+
Sbjct: 282 LNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDS 341
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
YD LI A+C+E R+ A E +++M G LP +NT+L+ LC+ G AL + E
Sbjct: 342 YSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFE- 400
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ G P Y+ + AL G A ++ +M+ KGI PD +T+NSL+ CL +
Sbjct: 401 --KLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCR 458
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/444 (28%), Positives = 213/444 (47%), Gaps = 31/444 (6%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+L +A +++ + D Y+Y ++ G N++ ++ M+SRG P+ V YN
Sbjct: 112 NLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNI 171
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I SLC GK+ A +M ++ +P+ +T++ILI A E + AL L ++ S G
Sbjct: 172 MIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG 231
Query: 178 FVPDVVTITKVLELLCSVG---RVMDAVEILEESGEQGRL-------------GKVKGGC 221
PD+ T ++ +C G R +D V L G + + + G
Sbjct: 232 LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGE 291
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R +K+M GC PNV T++ILISS+C G + A++V MK G++ + +YD LI
Sbjct: 292 RLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAF 351
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL---- 337
C GR+D ++ L+ M +G I YN++L L + D AL+ ++++++
Sbjct: 352 CKEGRLDLAIEYLEKM--VSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPP 409
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
RA + L C GN A +MI +G P+ + Y+ LI C++ V EA
Sbjct: 410 TVRAYNTMFSALWSC--GNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIG 467
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L+ +M + P +FN VL G+C+ V ++L+ + + +G LP Y LI+
Sbjct: 468 LLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELL---ITMVEKGCLPNETSYVLLIE 524
Query: 458 ALCEKGGFQSASMLLVQMVGKGIL 481
+ G A L + G++
Sbjct: 525 GIAYAGWRAEAMELANSLYRLGVI 548
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 164/332 (49%), Gaps = 24/332 (7%)
Query: 27 INDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
IN+ ++ D LVSR + P L +N+I+ + KE ++ + + + A G D +Y
Sbjct: 217 INEALELFDELVSR-GLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYN 275
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
IL++ +R DG +L+ M G +PN V ++ LI S C+ G+V A +++ M+E
Sbjct: 276 ILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ ++ LI A+CKE L A+ LEK S G +PD+V +L LC G A
Sbjct: 336 GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLA 395
Query: 202 VEILEESGEQGRLGKVKG----------------GCRFLKEMERKGCLPNVDTYNILISS 245
+++ E+ E G V+ + EM RKG P+ TYN LIS
Sbjct: 396 LDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISC 455
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C G++D A+ + DM+ ++++ ++ G+C R+ +G+++L M ++G
Sbjct: 456 LCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITM--VEKGCL 513
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ Y ++ G+ + EA+E + +L
Sbjct: 514 PNETSYVLLIEGIAYAGWRAEAMELANSLYRL 545
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 116/276 (42%), Gaps = 43/276 (15%)
Query: 229 RKGCLPNVDTYNI----LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
R+ PN+D + L++ C G + +L + G + V LI+G +
Sbjct: 51 RQPHFPNLDNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNS 110
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
+ +++++++E + + YN+++ G + NQ
Sbjct: 111 RNLKKAMRVMEILETYGDPD---VYSYNAMISGFSKANQ--------------------- 146
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ A + FD+M G P+VV Y+ +I + C ++ A E+M E+
Sbjct: 147 ------------IDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLK 194
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T+ ++ +G + AL+L +E + RG P Y+ +I+ +C++G
Sbjct: 195 DGCKPSVITYTILIEATILEGRINEALELFDE---LVSRGLRPDLYTYNAIIRGICKEGM 251
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A + + +G PD +++N LL ++ W
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRW 287
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 211/473 (44%), Gaps = 34/473 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + + +IRG M + + + PS FN ++ L+ + +
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M SG+ D +TY IL+ LC ++ + L M GVKP V Y++L+ C
Sbjct: 375 FKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCV 433
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + A L ++M PN VT++ L+ + + A LL + G + T
Sbjct: 434 NGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYT 493
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC VGRV + E+L+ +G + G + ++M
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG PN+ TY I YC+T D AL + ND++ G+ + Y++LI G C G +
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMS 613
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD----- 343
L++L LM K+G IS YNS + G +EAL + EK+ +D
Sbjct: 614 HALQVLVLM--LKDGLLPNISVYNSFITGYKNLKMMEEAL---RLYEKMIKEGIDLDTAT 668
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I GF DGNV A + + +M+ +G +P+ + + L H C+ + +A +L+ EM
Sbjct: 669 YTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMN 728
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
P +N +++G R G + A +L +E + R +P Y L+
Sbjct: 729 RLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLE---RKIMPDDTTYDILV 778
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/548 (25%), Positives = 229/548 (41%), Gaps = 64/548 (11%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP S + PD+ + I L + R N + + P FNS++DVLVK
Sbjct: 203 MPAS-EIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGG 261
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ +++A+G + LM G CL V + G+ P V Y
Sbjct: 262 RMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYT 321
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI + G +A L M + P+ F+++I ++ +A+ L ++
Sbjct: 322 VLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADS 381
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-----------RLGKVKGGC---- 221
G +PD T ++ LC ++ +A+ + E+ E G L GC
Sbjct: 382 G-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEA 440
Query: 222 -RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ EM KG PNV TY L+ + D A + +MK +G+S N TY+TLI G
Sbjct: 441 VKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLING 500
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFP 339
LC GR+ + ++L+ E EG YNS++ G + A +QM K P
Sbjct: 501 LCVVGRVCEVGEMLKRFE--TEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIP 558
Query: 340 RAV----------------DRSLKIL--------------------GFCVDGNVEDAKRC 363
+ D +LK+L GFC +GN+ A +
Sbjct: 559 PNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQV 618
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M+++G +PN+ +Y+ I Y + + EA L ++M G +T+ T++ G +
Sbjct: 619 LVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSK 678
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
GNV ALKL E + +G++P ++ L LC G A LL +M I P+
Sbjct: 679 DGNVTFALKLYSE---MVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPN 735
Query: 484 YLTWNSLL 491
L +N L+
Sbjct: 736 VLMYNMLI 743
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 204/468 (43%), Gaps = 32/468 (6%)
Query: 48 IFNSILDVLVKEDI--DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH 105
+F+ ++ KE + D R F +M AS ++ D ++ + LC +L
Sbjct: 179 MFDVVMRACFKEGMYDDAVRLF--DEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLR 236
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEE 161
M+ G P +N+++ L K G++ A L++ ++ + V + L+ YC +
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQR 296
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV---- 217
+ AL + E++ G VP VT T ++ G A E+ + + G L
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356
Query: 218 ------------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
K KEM G +P+ TYNILI C+ + AL+++ M
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNET 415
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G+ VTY +L+ C G +D+ +K+ M +G + Y +++ G + D
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEM--PGKGFTPNVVTYTTLMKGHINKAAFD 473
Query: 326 EALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+A L +M++ D + L G CV G V + + EG VP + Y+ +I
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ + + + A + ++M G P T+ + + G C+ ALK++ D+R +
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML-NDVR--CK 590
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ LI C++G A +LV M+ G+LP+ +NS +
Sbjct: 591 GLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFI 638
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 192/410 (46%), Gaps = 34/410 (8%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEEN 162
M+ +G ++ +++ ++ + K G A L +M EP+ S+ I + CK +
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR--------- 213
AL++L K GFVP T V+++L GR+ +A+ I +E G+
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATT 287
Query: 214 -------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+V+ +E R G +P TY +LI E G+ + A ++ M+ G
Sbjct: 288 LMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHG 347
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + ++ +I+GL + D + + + M DS G + YN +++ L + + E
Sbjct: 348 LLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADS--GIPDAFT-YNILIHWLCQRRKIRE 404
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
AL ++M + + P V +L +CV+G +++A + + +M +G PNVV Y L+
Sbjct: 405 ALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMK 464
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC---RQGNVGTALKLVEEDMRGI 441
+ + +A L+ EM +G T+NT+++GLC R VG LK E +
Sbjct: 465 GHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETE---- 520
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G +P + Y+ +I + G SA + QM KGI P+ +T+ S +
Sbjct: 521 --GFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 125/552 (22%), Positives = 230/552 (41%), Gaps = 35/552 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+TP K +L V + +M G D + + ++M+ D
Sbjct: 138 VTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGMYDDAV 197
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L M + ++P+ + + I SLCK RA ++ M++ P D TF+ ++
Sbjct: 198 RLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVVDVL 257
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--- 214
K + AL + ++ + G VV T ++ C V A++I EE+ G +
Sbjct: 258 VKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLVPTD 317
Query: 215 -------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
G + ++M G LP+ + +N++I + A+ +F +
Sbjct: 318 VTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKE 377
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M GI F TY+ LI LC +I + L + + M ++ G K I Y+S+L
Sbjct: 378 MADSGIPDAF-TYNILIHWLCQRRKIREALNLWEKMNET--GVKPYIVTYHSLLLCYCVN 434
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
DEA++ +M + P V + + G + A +M + G N Y
Sbjct: 435 GCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTY 494
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ LI+ C RV E E++K G++P A T+N++++G + G +G+A + ++
Sbjct: 495 NTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQ--- 551
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
+G P Y+ I C+ A +L + KG+ PD +NSL+ Q+
Sbjct: 552 MCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGN 611
Query: 500 W------LLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHT 553
L+L+L + ++ + V + K K+ L + G+ + T+T
Sbjct: 612 MSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMME-EALRLYEKMIKEGIDLDTATYT 670
Query: 554 FIIDRRVEIGHV 565
+ID + G+V
Sbjct: 671 TLIDGFSKDGNV 682
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 207/448 (46%), Gaps = 31/448 (6%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ PS K N ++ ++ + ++ A + +M A GVQ + +Y +++ G C V +
Sbjct: 163 LAPSTKTLNWVVKIVTEMGLVEYAENLF-DEMCARGVQPNCVSYRVMVVGYCKLGNVLES 221
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+ L M RG ++ + ++ C+ G V RA E PN + F+ +I
Sbjct: 222 DRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEG 281
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
CK ++ A +LE+ G+ P+V T T +++ LC G A +
Sbjct: 282 LCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRL------------ 329
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
FLK + + PNV TY +IS YC ++ A + + MK G++ N TY T
Sbjct: 330 ------FLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTT 383
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--M 334
LI G C G + +++ +M + EG + YN+++ GL ++ + EA + LK
Sbjct: 384 LIDGHCKAGNFERAYELMNVMNE--EGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFR 441
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
L V ++ I C ++ A F++M++ G P++ Y LI +C+E+R++E
Sbjct: 442 NGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKE 501
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
+ +E G +P T+ +++ G CR+GN+ ALK R G S Y
Sbjct: 502 SEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFH---RMSDHGCASDSITYGA 558
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILP 482
LI LC++ A L M+ KG+ P
Sbjct: 559 LISGLCKQSKLDEARCLYDAMIEKGLTP 586
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 196/440 (44%), Gaps = 38/440 (8%)
Query: 50 NSILDVLVKEDID---LARA-FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH 105
N+ L ++V+E + + RA +Y ++ G++ + + +++GLC V F++L
Sbjct: 237 NATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLE 296
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKE 160
M RG KPN + LI LCK G +A L S+ +PN +T++ +I YC++
Sbjct: 297 EMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRD 356
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
E + A +LL + G P+ T T +++ C G A E++ E+G
Sbjct: 357 EKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGF------- 409
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
PNV TYN ++ C+ G + A V +G+ + VTY LI
Sbjct: 410 ------------SPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISE 457
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
C I L + M K G + I Y +++ RE + E+ + ++ + L
Sbjct: 458 HCKQAEIKQALVLFNKM--VKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLV 515
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + I G+C +GN+ A + F +M + G + + Y LI C++ ++ EA L
Sbjct: 516 PTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCL 575
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M G P T T+ C+ + +A+ ++E + + ++ + L++
Sbjct: 576 YDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTV------NTLVRK 629
Query: 459 LCEKGGFQSASMLLVQMVGK 478
LC + A++ +++ K
Sbjct: 630 LCSERKVGMAALFFHKLLDK 649
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 24/340 (7%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G P T+ V++++ +G V A + +E +G +LG V
Sbjct: 162 GLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLES 221
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
R+L M +G + + T ++++ +CE G + AL F G+ N + + +I G
Sbjct: 222 DRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEG 281
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLK--QMEKL 337
LC G + ++L+ M G K + + +++ GL ++ ++A +LK + E
Sbjct: 282 LCKRGSVKQAFEMLEEMVG--RGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENH 339
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + + I G+C D + A+ +M E+G PN Y LI +C+ A E
Sbjct: 340 KPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYE 399
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
LM M G+ P T+N ++ GLC++G V A K+++ R G Y+ LI
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRN---GLDADKVTYTILIS 456
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C++ + A +L +MV GI PD ++ +L+ ++
Sbjct: 457 EHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCRE 496
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 168/384 (43%), Gaps = 36/384 (9%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
LV N P++ + +++ +++ +M G+ + TY L+ G C
Sbjct: 333 LVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAG 392
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFS 151
++L++VM G PN YN ++ LCK G+V A +S + + + VT++
Sbjct: 393 NFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYT 452
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
ILI +CK+ + ALVL K G PD+ + T ++ + C
Sbjct: 453 ILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFC------------------ 494
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
R ++K F +E R G +P TY +I YC G L AL F+ M G + +
Sbjct: 495 -REKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDS 553
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN----SVLYGLYRENQQDEA 327
+TY LI GLC ++D+ + M + KG ++P ++ Y + + A
Sbjct: 554 ITYGALISGLCKQSKLDEARCLYDAMIE-----KG-LTPCEVTRVTLAYEYCKIDDGCSA 607
Query: 328 LEYLKQME-KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ L+++E KL+ R V+ ++ L C + V A F +++++ N V + A
Sbjct: 608 MVVLERLEKKLWVRTVNTLVRKL--CSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTAC 665
Query: 387 CQEERVREASELMKEMTGHGYLPI 410
+ + S+L + +L I
Sbjct: 666 YESNKYDLVSDLSARIYKENHLAI 689
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 219/474 (46%), Gaps = 35/474 (7%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+ IL LVK LAR + KM+ SGV D+Y Y ++ C + + L+ M+
Sbjct: 190 SQILFSLVKIRQFALARDLF-DKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRME 248
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
S GVK ++V YN L++ LCKN +V A + + M ++VT+ L+ +C+ E L
Sbjct: 249 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 308
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV------- 217
AL + GFVP + +++ L V +A + + G+ G + V
Sbjct: 309 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 368
Query: 218 ---------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
R KEM +G PN TY ILI + C+ G+++ AL +F+ M+ GI
Sbjct: 369 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 428
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
Y++LI G C G +D +L M KEG + Y+ ++ GL R +
Sbjct: 429 VTVYPYNSLINGYCKQGSLDRARGLLSGM--VKEGLTPTAASYSPLIAGLCRNGDLSSCM 486
Query: 329 EYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E ++M + + + L GFC D +++A R FD+MI+ +PN V ++ +I Y
Sbjct: 487 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 546
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---EEDMRGIGR 443
C +R+A +L +M G P T+ +++SGLC V A + V E +
Sbjct: 547 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 606
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
SL + L+ +G F L +M +G+ D +++ ++ +Q
Sbjct: 607 FSL------TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 654
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 230/536 (42%), Gaps = 57/536 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE + T++ G R + ++ T + R PS + ++D L K+++ + AF
Sbjct: 290 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL-VEEAFSL 348
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+ G+ + + Y L+ LC R D +L M RG++PN V Y LIH+LCK
Sbjct: 349 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 408
Query: 129 NGKVGRARSLMSDMEEPN-DVT---FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M + VT ++ LI YCK+ +L A LL G P +
Sbjct: 409 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 468
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+ ++ LC G + +E+ E E+G + K+ R +M
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+PN T+N++I YC G + A +++ M G+ + TY +LI GLC +
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ + +E+S ++LYG +RE + E +M + S I
Sbjct: 589 KANEFVADLENSYAVLNN--FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTI 646
Query: 349 LGFCVDGNVEDAKRC--FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ + + K C F +M E+G P+ + Y C+I A +EE + +A +M G
Sbjct: 647 IVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG 706
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG-------------------------- 440
Y P T +++ LC+ G +G+A L +E + G
Sbjct: 707 YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK 766
Query: 441 -----IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G L ++ LIK LC+ G Q A L+ ++ G PD +++++++
Sbjct: 767 DLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 228/543 (41%), Gaps = 96/543 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E + +I L + MI D + D + + ++ +NS+++ K+ +D AR
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 453
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+ G+ +Y+ L+ GLC + +L M RG+ N+ + LI+ C
Sbjct: 454 L-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 512
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ K+ A L M + PN+VTF+++I YC N+ A L ++ G PD
Sbjct: 513 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 572
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESG----------------EQGRLGK-------- 216
T ++ LC V A E LE S +GR +
Sbjct: 573 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 632
Query: 217 -VKG-----------------------GCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
V+G C +EM+ +G P+ Y +I + + +
Sbjct: 633 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 692
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
AL+ ++ M +DG S N VT+ LI LC G + +L+ KE G + P N
Sbjct: 693 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA----ELL--CKEMLAGNVLP-N 745
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
Y + L+Y F +G++E AK M++ G
Sbjct: 746 KFTYNCF--------LDY--------------------FATEGDMEKAKDLHSAMLQ-GH 776
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+ ++V ++ LI C+ +++EA +LM ++T G+ P +++T++ LC+ G++ A +
Sbjct: 777 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFE 836
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
L E + +G P Y+ I+ G A + M+ G+ P++ T+ +LL
Sbjct: 837 LWNEMLY---KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 893
Query: 493 CLS 495
+S
Sbjct: 894 GIS 896
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 240/528 (45%), Gaps = 34/528 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
P + + +I GR D + F +P++ F ++D+LV + + A
Sbjct: 27 PLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAEL 86
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
Y KK++ G Q D + Y +L++ + ++ ++ MK +G +P+ Y L+++L
Sbjct: 87 VY-KKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNAL 145
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G+V ARS M E PN T+++L+ A+ K L AL L + GF P V
Sbjct: 146 GKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSV 205
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR-FLKEMERKGCLPNVDTYNI 241
VT +L+ LCS GRV G R +M GC P+ TY+
Sbjct: 206 VTYNILLDALCSAGRV--------------------GAARKLFHKMTGDGCSPDSYTYST 245
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L++ ++G ++ A VF +M G++ + V Y++L+ L G +D K+++ M S+
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM--SR 303
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
+G +N+++ L + N+ D A E +M + P + ++ I + G+
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A++ ++M+E G +P Y+ LIH + +V EA +++EM G P T+N ++
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
L ++G A +L ++ M+ +G P + Y+ I L A +L M G
Sbjct: 424 MLGKRGENQRAARLFQQ-MK--DKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCK 527
D + L+ + L L F+ V L++++ + K
Sbjct: 481 CPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVESRLTSQKAKTK 528
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 131/531 (24%), Positives = 221/531 (41%), Gaps = 69/531 (12%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M+A G T L+ N+ GD F L + +S P + LI L +
Sbjct: 19 KEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNS 78
Query: 130 GKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ RA + L+ + + +++LI + + L +A+ + + G PD T
Sbjct: 79 GEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTY 138
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ L GRV +A F M +G PN+ TYN+L+ +
Sbjct: 139 GFLVNALGKAGRVQEARS-------------------FFDAMLERGLTPNIPTYNLLMDA 179
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM------ED 299
+ + G LD AL +F +MK G + VTY+ L+ LCS GR+ K+ M D
Sbjct: 180 FRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPD 239
Query: 300 SKE--------GSKGRISP-------------------YNSVLYGLYRENQQDEALEYLK 332
S G GR+ YNS+L L + D + +K
Sbjct: 240 SYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMK 299
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKR-CFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+M + P A + I+ N DA R F +M+E G P+++ Y+ LI +Y +
Sbjct: 300 EMSRKGFHPDAFSFN-TIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARF 358
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+A ++++EM G++P T+N+++ L G V A ++EE G P
Sbjct: 359 GDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA---GCRPDV 415
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEM 509
Y+ L+ L ++G Q A+ L QM KG+ PD L++ + L+ L+E
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDR------LDEA 469
Query: 510 VSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRV 560
+ + + + R L AH AG L ++ + ++ R+
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQFMPVESRL 520
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 182/417 (43%), Gaps = 32/417 (7%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
S PDE + ++ LG+A + + D + +TP++ +N ++D K +D+A
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M G Q TY IL+ LC RVG KL H M G P+S Y+TL++
Sbjct: 191 GLF-AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNG 249
Query: 126 LCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L K+G+V A + +M + + V ++ L+ K N+ L+++ GF PD
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPD 309
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ +++ L G+ K M GC P++ +YNI
Sbjct: 310 AFSFNTIMDAL-------------------GKANKPDAAREVFARMVESGCKPDLISYNI 350
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI SY G A + +M G TY++LI L + G++D+ +L+ ME +
Sbjct: 351 LIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA- 409
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G + + YN ++ L + + A +QM+ + P + +++I G D +++
Sbjct: 410 -GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDE 468
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
A F M G + +Y LI A + ++L E ++P+ S +
Sbjct: 469 ALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ---FMPVESRLTS 522
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 13/278 (4%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
LKEM +G +T LI++Y A D+FN + S + LI L +
Sbjct: 18 LKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVN 77
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
G + + + + ++G + YN ++ R Q D A+E ++M+ + +
Sbjct: 78 SGEFERAELVYKKL--VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK---IKGSE 132
Query: 344 RSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
GF V+ G V++A+ FD M+E G PN+ Y+ L+ A+ + ++ A L
Sbjct: 133 PDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGL 192
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
EM G+ P T+N +L LC G VG A KL + G G P S YS L+
Sbjct: 193 FAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFH---KMTGDGCSPDSYTYSTLVNG 249
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L + G + A + +MV +G+ D + +NSLL L++
Sbjct: 250 LGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAK 287
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 219/474 (46%), Gaps = 35/474 (7%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+ IL LVK LAR + KM+ SGV D+Y Y ++ C + + L+ M+
Sbjct: 167 SQILFSLVKIRQFALARDLF-DKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRME 225
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
S GVK ++V YN L++ LCKN +V A + + M ++VT+ L+ +C+ E L
Sbjct: 226 SEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELE 285
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV------- 217
AL + GFVP + +++ L V +A + + G+ G + V
Sbjct: 286 MALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALI 345
Query: 218 ---------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
R KEM +G PN TY ILI + C+ G+++ AL +F+ M+ GI
Sbjct: 346 DKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIK 405
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
Y++LI G C G +D +L M KEG + Y+ ++ GL R +
Sbjct: 406 VTVYPYNSLINGYCKQGSLDRARGLLSGM--VKEGLTPTAASYSPLIAGLCRNGDLSSCM 463
Query: 329 EYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
E ++M + + + L GFC D +++A R FD+MI+ +PN V ++ +I Y
Sbjct: 464 ELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGY 523
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---EEDMRGIGR 443
C +R+A +L +M G P T+ +++SGLC V A + V E +
Sbjct: 524 CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNN 583
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
SL + L+ +G F L +M +G+ D +++ ++ +Q
Sbjct: 584 FSL------TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 230/536 (42%), Gaps = 57/536 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE + T++ G R + ++ T + R PS + ++D L K+++ + AF
Sbjct: 267 DEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKEL-VEEAFSL 325
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+ G+ + + Y L+ LC R D +L M RG++PN V Y LIH+LCK
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385
Query: 129 NGKVGRARSLMSDMEEPN-DVT---FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M + VT ++ LI YCK+ +L A LL G P +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+ ++ LC G + +E+ E E+G + K+ R +M
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+PN T+N++I YC G + A +++ M G+ + TY +LI GLC +
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ + +E+S ++LYG +RE + E +M + S I
Sbjct: 566 KANEFVADLENSYAVLNN--FSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTI 623
Query: 349 LGFCVDGNVEDAKRC--FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ + + K C F +M E+G P+ + Y C+I A +EE + +A +M G
Sbjct: 624 IVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG 683
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG-------------------------- 440
Y P T +++ LC+ G +G+A L +E + G
Sbjct: 684 YSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAK 743
Query: 441 -----IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G L ++ LIK LC+ G Q A L+ ++ G PD +++++++
Sbjct: 744 DLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 228/543 (41%), Gaps = 96/543 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E + +I L + MI D + D + + ++ +NS+++ K+ +D AR
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+ G+ +Y+ L+ GLC + +L M RG+ N+ + LI+ C
Sbjct: 431 L-SGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFC 489
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ K+ A L M + PN+VTF+++I YC N+ A L ++ G PD
Sbjct: 490 KDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNY 549
Query: 184 TITKVLELLCSVGRVMDAVEI---LEESG----------------EQGRLGK-------- 216
T ++ LC V A E LE S +GR +
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609
Query: 217 -VKG-----------------------GCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
V+G C +EM+ +G P+ Y +I + + +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
AL+ ++ M +DG S N VT+ LI LC G + +L+ KE G + P N
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSA----ELL--CKEMLAGNVLP-N 722
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
Y + L+Y F +G++E AK M++ G
Sbjct: 723 KFTYNCF--------LDY--------------------FATEGDMEKAKDLHSAMLQ-GH 753
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+ ++V ++ LI C+ +++EA +LM ++T G+ P +++T++ LC+ G++ A +
Sbjct: 754 LASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFE 813
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
L E + +G P Y+ I+ G A + M+ G+ P++ T+ +LL
Sbjct: 814 LWNEMLY---KGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLS 870
Query: 493 CLS 495
+S
Sbjct: 871 GIS 873
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 134/533 (25%), Positives = 234/533 (43%), Gaps = 64/533 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + +I GR + + +S ++PS +++N+++D LVK + +DLA +
Sbjct: 181 NEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKF 240
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M A + D +TY IL+ G+C + V + +L+ M+ G PN Y LI
Sbjct: 241 QQ-MSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFN 299
Query: 129 NGKVGRARSLMSDME----EPNDVTF---------------------------------- 150
KV A ++ M+ P++ T
Sbjct: 300 AKKVDEAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLA 359
Query: 151 -SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
L+C + A LL+K G PD T + L + + IL+
Sbjct: 360 CDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFV 419
Query: 210 EQGR----------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
EQG GKV G + +M + G L NV +YN++I +C+T ++D
Sbjct: 420 EQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMD 479
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A + F +M+ GI N VT++TLI G C GG I +L ++ + G K I ++S
Sbjct: 480 KATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLE--HGFKPDIFTFSS 537
Query: 314 VLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ GL R Q ++AL + M L P AV ++ I C+ G+V + + +M +G
Sbjct: 538 IIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDG 597
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P+V ++ LI ++C+ +V +A +L M G +P T+ + C+ G A
Sbjct: 598 INPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAK 657
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+L + G +P S + ++ AL ++ F++A + GIL ++
Sbjct: 658 ELF---LSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNF 707
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 13/295 (4%)
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
G GRLG K ++ G P+ YN +I + ++ LD A F M D
Sbjct: 190 GSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCK 249
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ TY+ LI G+C G +D+ L++++ ME G + Y ++ G + + DEA
Sbjct: 250 PDRFTYNILIHGVCRSGVVDEALRLVKQMEGL--GYSPNVFTYTILIDGFFNAKKVDEAF 307
Query: 329 EYLKQME--KLFP-RAVDRSLKILGF--CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
L+ M+ K+ P A RS I G CV N A + IE V + D L+
Sbjct: 308 RVLETMKARKVSPSEATIRSF-IHGVFRCVAPN--KAFELAIEFIEREPVLQRLACDTLL 364
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ REA L+K+ G+ P ++TFN ++ L + ++ +++ R + +
Sbjct: 365 CCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILD---RFVEQ 421
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
G G Y LIKAL G + QMV G+L + ++N ++ C + +
Sbjct: 422 GMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTS 476
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 214/453 (47%), Gaps = 49/453 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY IL+ G ++G ++L +M + G PN ++N+L+H+ CK+ A L M
Sbjct: 309 TYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKM 368
Query: 143 E----EPNDVTFSILICAYCKEENLVNA--LVLLEKSFS----FGFVPDVVTITKVLELL 192
+P + ++I I + C E L + L L EK++S G V + V ++ L
Sbjct: 369 IKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCL 428
Query: 193 CSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNV 236
C G+ A EI+ E +G + KV+ +EM++ G +P+V
Sbjct: 429 CGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSV 488
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY ILI S+C+ G++ A + F++M D + N VTY +LI ++ D K+ ++
Sbjct: 489 YTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEM 548
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME------------KL------F 338
M EGSK + Y +++ G + Q D+A + +M+ KL
Sbjct: 549 M--LLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET 606
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + G C VE+A D M G PN ++YD LI +C+ ++ A E+
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+M+ GY P T++++++ L ++ + LK++ + + P Y+ +I
Sbjct: 667 FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLS---KMLENSCTPNVVIYTDMIDG 723
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ G + A L+++M G P+ +T+ +++
Sbjct: 724 LCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMI 756
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 201/450 (44%), Gaps = 49/450 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + ++I +AR + D K +++ P++ + +++D K ID A
Sbjct: 521 PNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQI 580
Query: 68 YRKKMMASGVQGDDY-----------------TYAILMKGLCLTNRVGDGFKLLHVMKSR 110
Y + M ++ D TY L+ GLC NRV + +LL M
Sbjct: 581 YAR--MQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVN 638
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA 166
G +PN ++Y+ LI CK GK+ A+ + M E PN T+S LI + KE+ L
Sbjct: 639 GCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLV 698
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L +L K P+VV T +++ LC VG+ +A R + +
Sbjct: 699 LKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAY-------------------RLMLK 739
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME GC PNV TY +I + + G ++ L+++ DM G + NF+TY LI CS G
Sbjct: 740 MEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGL 799
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA-LEYLKQMEKLFPRAVDRS 345
+D+ ++L M+ + IS Y ++ G RE L+ L + E + ++ R
Sbjct: 800 LDEAHRLLDEMKQTYWPR--HISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRI 857
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEG--GVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
L I F G +E A +++ V N +Y LI + +V +A EL M
Sbjct: 858 L-IDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMI 916
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
+P STF ++ GL R G AL+L
Sbjct: 917 NKNVVPELSTFVHLIKGLTRVGKWQEALQL 946
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 229/546 (41%), Gaps = 77/546 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD+S + VI L A + + + + + PS+ + ++D K I AR +
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ + TY L+ +V D KL +M G KPN V Y LI C
Sbjct: 511 F-DEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHC 569
Query: 128 KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
K G++ +A + + M+ D+ S + + ++N P+++T
Sbjct: 570 KAGQIDKACQIYARMQ--GDIESSDIDMYFKLDDNDCE-------------TPNIITYGA 614
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ LC RV +A E+L+ M GC PN Y+ LI +C
Sbjct: 615 LVDGLCKANRVEEAHELLD-------------------TMSVNGCEPNQIVYDALIDGFC 655
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QLMEDSKEGSKG 306
+TG L++A +VF M G N TY +LI L R+D LK+L +++E+S
Sbjct: 656 KTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENS---CTP 712
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ Y ++ GL + + +EA + +ME++ +P + + I GF G +E +
Sbjct: 713 NVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELY 772
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM---------------------- 402
M +G PN + Y LI+ C + EA L+ EM
Sbjct: 773 RDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNRE 832
Query: 403 --TGHGYL---------PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
T G L P+ S + ++ + G + AL L+EE + ++
Sbjct: 833 FITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEE-ISSSPSLAVANKYL 891
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
Y+ LI++L A L M+ K ++P+ T+ L+ L++ W L L++ +
Sbjct: 892 YTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSIC 951
Query: 512 FVMVVH 517
MV H
Sbjct: 952 -QMVCH 956
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 169/417 (40%), Gaps = 34/417 (8%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR-------SLMSDMEEPNDVTFSILIC 155
L + G V+YN LI LC N V R + D E + LI
Sbjct: 120 FLWASRQIGYSHTPVVYNALIELLCCNA-VNNDRVSHKFLMQIRDDDRELLRKLLNFLIQ 178
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-RL 214
C+ AL L + FG+ T ++++ ++ A + E G R+
Sbjct: 179 KCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRM 238
Query: 215 GKVKGGC------------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
GC L +E++ +P+ YN ++S CE + A+D+ + M
Sbjct: 239 DGCTLGCFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRM 298
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ N VTY L+ G G++ +IL +M EG +NS+++ +
Sbjct: 299 RSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMM--MTEGCYPNREMFNSLVHAYCKSR 356
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN------VEDAKRCFDQMIEEGGVP 374
A + K+M K P + ++ I C + +E A++ + +M++ G V
Sbjct: 357 DYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVL 416
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
N V C + +A E++ EM G++P ST++ V+ LC V A L
Sbjct: 417 NKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLF 476
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
EE + G +P Y+ LI + C+ G Q A +M+ P+ +T+ SL+
Sbjct: 477 EEMKKN---GIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLI 530
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 219/483 (45%), Gaps = 67/483 (13%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV---KPNSVIYNTLIHSL 126
++M G D +Y IL+KGLC R + +LLH+M V PN V Y+T+I+
Sbjct: 154 QRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGF 213
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G+V + +L +M + P+ VT++ +I CK + A + ++ G P++
Sbjct: 214 FTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNI 273
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG------RLGKV------KGGCR----FLKE 226
T ++ S+G+ + V +LEE G G + G CR F
Sbjct: 274 DTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDS 333
Query: 227 MERKGCLPNVDTY-----------------------------------NILISSYCETGV 251
M KG P+V TY NI S+Y + G+
Sbjct: 334 MIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGI 393
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSKEGSKGRISP 310
+D A+D+FN M+ G+S + V+Y LI LC GR+DD +K Q++ EG I
Sbjct: 394 IDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMI---NEGVTPDIVV 450
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
++S++YGL ++ ++ E +M + P V + + C +G V + +R D +
Sbjct: 451 FSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P+V+ Y+ LI +C + EAS+L++ M G P + ++NT+L G C+ G +
Sbjct: 511 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+A + + G PG Y+ ++ L + F A L + M+ G D T+N
Sbjct: 571 SAYSHFR---KMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYN 627
Query: 489 SLL 491
+L
Sbjct: 628 IIL 630
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 200/452 (44%), Gaps = 43/452 (9%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFK-LLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ +G + D L+ GLC RVG+ LL M G P++V YN L+ LC
Sbjct: 120 ILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEK 179
Query: 131 KVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L+ M + PN V++S +I + E + L + G PDVV
Sbjct: 180 RAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVV 239
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T V++ LC A + ++ + G +GK K R L+EM
Sbjct: 240 TYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEM 299
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G PN TY L++ C+ G A F+ M GI + TY ++ G + G +
Sbjct: 300 SAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGAL 359
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ----DEALEYLKQMEK--LFPRA 341
+ +L LM ISP + + + + D+A++ +M + L P A
Sbjct: 360 SEMHDLLNLM------VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDA 413
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V I C G V+DA+ F+QMI EG P++V++ L++ C ++ + EL E
Sbjct: 414 VSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFE 473
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKAL 459
M G P FNT+L LC++G V +LV+ E M G P Y+ LI
Sbjct: 474 MLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECM-----GVRPDVISYNTLIDGH 528
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C G AS LL MV G+ PD ++N+LL
Sbjct: 529 CLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 219/490 (44%), Gaps = 38/490 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLAR 65
PPD + TVI GL +A++ + + + P++ +N ++ + + + ++ R
Sbjct: 235 PPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVR 294
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
++M A G + + TY L+ LC R + M +G+KP+ Y ++H
Sbjct: 295 ML--EEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHG 352
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
G + L++ M PN F+I AY K + A+ + K G PD
Sbjct: 353 YATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPD 412
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
V+ +++ LC +GRV DA +VK +M +G P++ ++
Sbjct: 413 AVSYGALIDALCKLGRVDDA--------------EVK-----FNQMINEGVTPDIVVFSS 453
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ C + ++F +M GI N V ++T++ LC GR+ +G Q + DS
Sbjct: 454 LVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEG----QRLVDSI 509
Query: 302 E--GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
E G + + YN+++ G DEA + L+ M L P + + + G+C G +
Sbjct: 510 ECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRI 569
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A F +M+ G P VV Y+ ++H Q +R EA EL M G T+N +
Sbjct: 570 DSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNII 629
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
L+GLC+ V A+K+ + +G ++ +I AL + G + A L +
Sbjct: 630 LNGLCKSNCVDEAIKMFQN---LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPA 686
Query: 478 KGILPDYLTW 487
G++ + +T+
Sbjct: 687 NGLVQNVVTY 696
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 185/420 (44%), Gaps = 53/420 (12%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY+IL+ C + GF ++ G + + ++ N L++ LC +VG A
Sbjct: 96 TYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMD----- 150
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
VLL++ G +PD V+ +L+ LC+ R +A+
Sbjct: 151 -------------------------VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEAL 185
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+L + + + C PNV +Y+ +I+ + G +D ++F +M
Sbjct: 186 ELLH----------------MMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEM 229
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
GI + VTY T+I GLC D + Q M D+ G K I YN +++G
Sbjct: 230 MDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDN--GVKPNIDTYNCLIHGYLSIG 287
Query: 323 QQDEALEYLKQMEKLFPRAVDRSL-KILGF-CVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ E + L++M P+ + +L + C +G +A+ FD MI +G P+V Y
Sbjct: 288 KWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYG 347
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
++H Y + + E +L+ M +G P FN S + G + A+ + + MR
Sbjct: 348 IMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK-MRQ 406
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+G P + Y LI ALC+ G A + QM+ +G+ PD + ++SL+ L W
Sbjct: 407 --QGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKW 464
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 123/263 (46%), Gaps = 9/263 (3%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN TY+ILI +C G L+ F + G + + + L+ GLC G R+ + + +
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF---PRAVDRSLKI 348
L L + G YN +L GL E + +EALE L M ++++ P V S I
Sbjct: 152 L-LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVI 210
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF +G V+ F +M++ G P+VV Y +I C+ + A + ++M +G
Sbjct: 211 NGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T+N ++ G G ++++EE G G P Y L+ LC+ G + A
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAG---GPKPNCCTYGSLLNYLCKNGRCREA 327
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
M+GKGI P T+ +L
Sbjct: 328 RFFFDSMIGKGIKPSVTTYGIML 350
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 194/446 (43%), Gaps = 25/446 (5%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDID 62
S+ PD + T++ G +A I+ + +TP + +N+IL L + +
Sbjct: 546 SVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFS 605
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A+ Y M+ SG + D YTY I++ GLC +N V + K+ + S+G++ N + +N +
Sbjct: 606 EAKELYL-NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIM 664
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I +L K G+ A L + + N VT+ +++ +E +L L G
Sbjct: 665 IGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGT 724
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL------------KE 226
P+ + ++ L G + A L + E+ + + K
Sbjct: 725 APNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKS 784
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ +K + N + LI + +D A +F +M + G++ + VTY+T++ GL GR
Sbjct: 785 LPKKYRILNEANSSALIK---KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 841
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ ++ M +S+ ++ I YN +L GL + N DEA + + + + L +
Sbjct: 842 FSEAKELYLSMINSR--TQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITF 899
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ I G EDA F + G VP+VV Y + +E + E L M
Sbjct: 900 NIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEK 959
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTA 430
G + N ++ L ++G++ A
Sbjct: 960 SGTPLDSRLLNALVRRLLQRGDISRA 985
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 188/470 (40%), Gaps = 54/470 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
P+ F T++ L + + + + D + + P + +N+++D + ID A
Sbjct: 481 PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKL 540
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M++ G++ D ++Y L+ G C R+ + M S G+ P V YNT++H L
Sbjct: 541 L-EGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLF 599
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ + A+ L +M + + T++I++ CK + A+ + + S G +++
Sbjct: 600 QTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNII 659
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG--------RL--------GKVKGGCRFLKEM 227
T ++ L GR DA+++ G RL G ++ M
Sbjct: 660 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM 719
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS---- 283
E+ G PN N L+ G + A + + S T LI S
Sbjct: 720 EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQ 779
Query: 284 ------------------------GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
RIDD + + M +G + YN++L+GL+
Sbjct: 780 HHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREM--LMKGLTPDVVTYNTILHGLF 837
Query: 320 RENQQDEALE-YLKQMEKLFPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ + EA E YL + + IL G C V++A + F + +G N++
Sbjct: 838 QTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNII 897
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
++ +I A + R +A +L + +G +P T+ V L +G++
Sbjct: 898 TFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSL 947
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 209/447 (46%), Gaps = 37/447 (8%)
Query: 55 VLVKEDIDLARAFYRKKMMA----SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR 110
L++E + R ++M SG D +Y +L+ G C + + + ++L M
Sbjct: 119 ALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM--- 175
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA 166
GV PN+ Y+ ++ SLC GK+ +A ++ + P+ VT ++LI A CKE + A
Sbjct: 176 GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQA 235
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
+ L + + G PDVVT +++ C GR+ +A+ RFLK+
Sbjct: 236 MKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAI-------------------RFLKK 276
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ GC P+V ++N+++ S C G A+ + M G + VT++ LI LC G
Sbjct: 277 LPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGL 336
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ L +L++M K G +N ++ G D A+EYL+ M +P V
Sbjct: 337 LGKALNVLEMM--PKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTY 394
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ + C DG V+DA Q+ +G P+++ Y+ +I + + A EL++EM
Sbjct: 395 NILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCY 454
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P T +V+ GL R+G V A+K R R P + Y+ +I LC+
Sbjct: 455 KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIR---PNAFIYNSIITGLCKSQQ 511
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A L MV KG P T+ +L+
Sbjct: 512 TSLAIDFLADMVAKGCKPTEATYTTLI 538
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 211/445 (47%), Gaps = 30/445 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D L++ C R + +++ +++ G + YN LI CK+G+
Sbjct: 105 MTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGE 164
Query: 132 VGRARSLMSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+ A ++ M PN T+ ++C+ C L A+ +L + PDVVT T +++
Sbjct: 165 IEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLID 224
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
C +ESG V + EM KGC P+V TYN+LI +C+ G
Sbjct: 225 ATC------------KESG-------VGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGG 265
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
LD A+ + G + ++++ ++R LCSGGR D +K+L M ++G +
Sbjct: 266 RLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATM--LRKGCLPSVVT 323
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK--ILGFCVDGNVEDAKRCFDQMI 368
+N ++ L ++ +AL L+ M K RS I GFC ++ A + M+
Sbjct: 324 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV 383
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P++V Y+ L+ A C++ +V +A ++ +++ G P ++NTV+ GL + G
Sbjct: 384 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 443
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A++L+EE +G P + ++ L +G + A + I P+ +N
Sbjct: 444 LAVELLEEMCY---KGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYN 500
Query: 489 SLL--ICLSQQTTWLLLLLLNEMVS 511
S++ +C SQQT+ L + L +MV+
Sbjct: 501 SIITGLCKSQQTS-LAIDFLADMVA 524
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 217/480 (45%), Gaps = 72/480 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + + +I G ++ I + ++ D R ++P+ ++++L L R +
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLD---RMGVSPNAATYDAVLCSLCD------RGKLK 198
Query: 70 KKMMASGVQ------GDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ M G Q D T +L+ C + VG KL + M+++G KP+ V YN LI
Sbjct: 199 QAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLI 258
Query: 124 HSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
CK G+ L A+ L+K S+G PDV+
Sbjct: 259 KGFCKGGR-------------------------------LDEAIRFLKKLPSYGCQPDVI 287
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LCS GR MDA+ + L M RKGCLP+V T+NILI
Sbjct: 288 SHNMILRSLCSGGRWMDAM-------------------KLLATMLRKGCLPSVVTFNILI 328
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G+L AL+V M G + N +++ LI+G C+G ID ++ L++M G
Sbjct: 329 NFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM--VSRG 386
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN +L L ++ + D+A+ L Q+ P + + I G G E A
Sbjct: 387 CYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAV 446
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
++M +G P+++ ++ +E +VREA + + P A +N++++GL
Sbjct: 447 ELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGL 506
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ A+ + DM + +G P Y+ LIK + +G + AS L ++ +G++
Sbjct: 507 CKSQQTSLAIDFL-ADM--VAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLV 563
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 176/371 (47%), Gaps = 38/371 (10%)
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
LE + G PDV+ T ++ C +GR +A +I+ +E
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIM-------------------GILE 141
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G + +V +YN+LIS YC++G ++ AL V + M G+S N TYD ++ LC G++
Sbjct: 142 ESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLK 198
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+++L SK + ++ +E+ +A++ +M P V ++
Sbjct: 199 QAMQVLGRQLQSK--CYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNV 256
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I GFC G +++A R ++ G P+V+ ++ ++ + C R +A +L+ M G
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
LP TFN +++ LC++G +G AL ++E + G P S ++PLI+ C G
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPK---HGHTPNSRSFNPLIQGFCNGKGID 373
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
A L MV +G PD +T+N LL L + ++ V+++ +LS+K
Sbjct: 374 RAIEYLEIMVSRGCYPDIVTYNILLTALCKD---------GKVDDAVVILSQLSSKGCSP 424
Query: 527 KLRSLNHLAHG 537
L S N + G
Sbjct: 425 SLISYNTVIDG 435
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 138/310 (44%), Gaps = 30/310 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDL 63
PD + +I+G + +++ ++ + + P + N IL L + + L
Sbjct: 249 PDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKL 308
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
RK + S V T+ IL+ LC +G +L +M G PNS +N LI
Sbjct: 309 LATMLRKGCLPSVV-----TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLI 363
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
C + RA + M P+ VT++IL+ A CK+ + +A+V+L + S G
Sbjct: 364 QGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCS 423
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P +++ V++ L VG+ AVE+LEE +G R GKV+ +F
Sbjct: 424 PSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKF 483
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++R PN YN +I+ C++ A+D DM G TY TLI+G+
Sbjct: 484 FHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITY 543
Query: 284 GGRIDDGLKI 293
G +D K+
Sbjct: 544 EGLAEDASKL 553
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD +V+ GL R + + +K + RF + P+ I+NSI+ L K +
Sbjct: 459 PDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDF 518
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
M+A G + + TY L+KG+ D KL + + SRG+ S++
Sbjct: 519 LADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLV 568
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 218/464 (46%), Gaps = 29/464 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M A GV+ + TY L+ C + + F L M GV P+ V + L+ LC++
Sbjct: 246 ERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRD 305
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A +L +M++ PN VT+ LI + K +L LL + S G V D+V
Sbjct: 306 GQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMY 365
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
T +++ L G++ +A ++L + R G + G + L +ME
Sbjct: 366 TALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE 425
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K +PNV T++ +I+ + G L A D MK GI+ N VTY TLI G +
Sbjct: 426 KSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEA 485
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
L + + M EG + +S++ GL + + A K M++ L V+ +
Sbjct: 486 ALDVYRDM--LHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G GN+ A + +++E+ P+ V+Y+ I+ C + EA +KEM G
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQ 466
P +T+NT+++ CR+G ALKL++E + R S+ P Y+ L+ L E G +
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKE----MKRNSIKPNLITYTTLVVGLLEAGVVK 659
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
A LL +M G P LT +L S ++L ++E++
Sbjct: 660 KAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELM 703
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 244/523 (46%), Gaps = 61/523 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ + +I + + +++ + + R + P + ++++D L ++ A A
Sbjct: 255 PNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYAL 314
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ M GV + TY L+ L R + LL M SRGV + V+Y L+ L
Sbjct: 315 FRE-MDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLG 373
Query: 128 KNGKVGRARSLM----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A+ ++ SD PN VT+++L+ A+C+ N+ A +L + +P+VV
Sbjct: 374 KEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVV 433
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ L ++G LGK ++++M+ G PNV TY LI
Sbjct: 434 TFSSIINGLV----------------KRGCLGK---AADYMRKMKDSGIAPNVVTYGTLI 474
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + ++ALDV+ DM +G+ N D+L+ GL G I+ + + M++ G
Sbjct: 475 DGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDE--RG 532
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEK-LFPRAVDRSLKILGFCVDGNVEDAK 361
Y +++ GL++ A + ++ MEK L P AV ++ I C G +AK
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M G P+ Y+ +I A C+E + +A +L+KEM + P T+ T++ GL
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGL 652
Query: 422 CRQGNVGTALKLVEE-DMRGIGRGSLP-------------------------GSG-H--- 451
G V A L+ E G SL G+G H
Sbjct: 653 LEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADI 712
Query: 452 --YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
Y+ L+ LC G ++A+++L +M+ +GI PD +T+N+L++
Sbjct: 713 TVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALIL 755
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 213/499 (42%), Gaps = 65/499 (13%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV------------------------ 106
+M GV D T + + GLC T VG+ L +
Sbjct: 140 EMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYCK 199
Query: 107 -------------MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
M ++GV + V YN+L+ +G A ++ M+ EPN VT
Sbjct: 200 VQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVT 259
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ LI YCK + + A L E G +PDVVT++ +++ LC G+ +A + E
Sbjct: 260 YTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMD 319
Query: 210 EQG-------------RLGKVKGGCR---FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ G L K + G L EM +G + ++ Y L+ + G ++
Sbjct: 320 KIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIE 379
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A DV + D I+ NFVTY L+ C G ID ++L ME+ + + ++S
Sbjct: 380 EAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEE--KSVIPNVVTFSS 437
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ GL + +A +Y+++M+ + P V I GF E A + M+ EG
Sbjct: 438 IINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEG 497
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
N + D L++ + + A L K+M G L + T++ GL + GN+ A
Sbjct: 498 VEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAF 557
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K+ +E M + P + Y+ I LC G F A L +M G+ PD T+N+++
Sbjct: 558 KVGQELME---KNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMI 614
Query: 492 ICLSQQ-TTWLLLLLLNEM 509
++ T L LL EM
Sbjct: 615 AARCREGKTSKALKLLKEM 633
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 218/514 (42%), Gaps = 64/514 (12%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++ P++ F+SI++ LVK A Y +KM SG+ + TY L+ G
Sbjct: 427 SVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAA 486
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICA 156
+ M GV+ N+ + ++L++ L KNG + A +L DM+E + V ++ L+
Sbjct: 487 LDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDG 546
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---- 212
K N+ A + ++ PD V + LC++G+ +A L+E G
Sbjct: 547 LFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPD 606
Query: 213 ------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
R GK + LKEM+R PN+ TY L+ E GV+ A + N
Sbjct: 607 QATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLN 666
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+M G + +T+ +++ CSG R D L+I +LM + G I+ YN++++ L
Sbjct: 667 EMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGA--GLHADITVYNTLVHVLC 723
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV- 376
A L +M + P + + ILG C ++++A + QM+ +G PN+
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIA 783
Query: 377 ----------------------------------VIYDCLIHAYCQEERVREASELMKEM 402
+ YD L+ Y ++ EA L EM
Sbjct: 784 TFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEM 843
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G++P AST+N+++S + G + A +L E R RG L S Y L+ +
Sbjct: 844 VSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKR---RGVLHTSSTYDILLNGWSKL 900
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+LL M G P T +S+ S+
Sbjct: 901 RNGIEVRILLKDMKELGFKPSKGTISSMSRAFSR 934
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 195/411 (47%), Gaps = 28/411 (6%)
Query: 49 FNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+ +++D L K ++ AF +++M + D Y + + LC + + L M
Sbjct: 540 YTTLMDGLFKTG-NMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEM 598
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
++ G++P+ YNT+I + C+ GK +A L+ +M+ +PN +T++ L+ + +
Sbjct: 599 RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVV 658
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV----EILEESGEQGRL----- 214
A LL + S GF P +T +VL+ CS R D + E++ +G +
Sbjct: 659 KKAKFLLNEMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGAGLHADITVYNT 717
Query: 215 --------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
G + L EM +G P+ T+N LI +C++ LD+A ++ M G
Sbjct: 718 LVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQG 777
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+S N T++TL+ GL S GRI + +L M+ K G + Y+ ++ G +++ + E
Sbjct: 778 LSPNIATFNTLLGGLESAGRIGEADTVLSDMK--KVGLEPNNLTYDILVTGYAKKSNKVE 835
Query: 327 ALE-YLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
AL Y + + K F P+A + + F G + AK F +M G + YD L++
Sbjct: 836 ALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLN 895
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ + E L+K+M G+ P T +++ R G G A +L++
Sbjct: 896 GWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRLLK 946
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 218/494 (44%), Gaps = 40/494 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVK-EDIDLA 64
P+ F ++I GL + + KA D + + + P++ + +++D K + + A
Sbjct: 430 PNVVTFSSIINGLVKRGCLG---KAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAA 486
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
YR M+ GV+ +++ L+ GL + L M RG+ + V Y TL+
Sbjct: 487 LDVYRD-MLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMD 545
Query: 125 SLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L K G + A + LM P+ V +++ I C A L++ + G P
Sbjct: 546 GLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEP 605
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T ++ C R GK + LKEM+R PN+ TY
Sbjct: 606 DQATYNTMIAARC-------------------REGKTSKALKLLKEMKRNSIKPNLITYT 646
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMED 299
L+ E GV+ A + N+M G + +T+ +++ CSG R D L+I +LM
Sbjct: 647 TLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMG 705
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ G I+ YN++++ L A L +M + P + + ILG C ++
Sbjct: 706 A--GLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++A + QM+ +G PN+ ++ L+ R+ EA ++ +M G P T++ +
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDIL 823
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
++G ++ N AL+L E + +G +P + Y+ L+ + G A L +M
Sbjct: 824 VTGYAKKSNKVEALRLYCE---MVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKR 880
Query: 478 KGILPDYLTWNSLL 491
+G+L T++ LL
Sbjct: 881 RGVLHTSSTYDILL 894
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 168/355 (47%), Gaps = 34/355 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD++ + T+I R + +K + R ++ P+L + +++ L++ + F
Sbjct: 605 PDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFL 664
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLC 127
+M ++G T+ +++ C +R D +H +M G+ + +YNTL+H LC
Sbjct: 665 LNEMASAGFAPTSLTHQRVLQA-CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLC 723
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G A ++ +M P+ +TF+ LI +CK +L NA + + G P++
Sbjct: 724 CHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIA 783
Query: 184 TITKVLELLCSVGRVMDAVEILEE-----------------SGEQGRLGKVKGGCRFLKE 226
T +L L S GR+ +A +L + +G + KV+ R E
Sbjct: 784 TFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVE-ALRLYCE 842
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M KG +P TYN L+S + + G+++ A ++F++MK G+ TYD L+ G +
Sbjct: 843 MVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW---SK 899
Query: 287 IDDGLKILQLMEDSKE----GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ +G+++ L++D KE SKG IS S+ R EA LK + K+
Sbjct: 900 LRNGIEVRILLKDMKELGFKPSKGTIS---SMSRAFSRPGMTGEARRLLKTLFKV 951
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 5/262 (1%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+YNI +++ E G A V ++M G+SW+ VT T + GLC G + + + +++
Sbjct: 117 SYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEML 176
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
+ + +N+++ G + AL +++M + + V + + GF G
Sbjct: 177 VRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSG 236
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ + A ++M +G PNVV Y LI YC+ + + EA L + M G LP T +
Sbjct: 237 DADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLS 296
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ GLCR G A L E M IG P Y LI +L + + LL +M
Sbjct: 297 ALVDGLCRDGQFSEAYALFRE-MDKIGVA--PNHVTYCTLIDSLAKARRGSESLGLLGEM 353
Query: 476 VGKGILPDYLTWNSLLICLSQQ 497
V +G++ D + + +L+ L ++
Sbjct: 354 VSRGVVMDLVMYTALMDRLGKE 375
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 223/476 (46%), Gaps = 35/476 (7%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFY-RKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
N TP L F +L L K ++ FY +M SG+ D T IL+ LC NRVG+
Sbjct: 91 NPTPPLSSFTHLLSGLAKIK-HYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGE 149
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
G ++ + RG P+ V Y TLI LC ++ +A L + M++ PN +T+ L+
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 156 AYCKEENLVNALVLLEKS------FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
C+ N+ AL L ++ + F P V++ + +++ LC R +A ++ EE
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 210 EQGRLGKV--------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
QG V + R EM +G PNV T+N+LI C+ G + A D+
Sbjct: 270 VQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEV 329
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M GI N +TY++LI G C G ++ ++ M +G + + Y ++ G +
Sbjct: 330 MIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPS--KGCEPDVICYTVLINGYCKT 387
Query: 322 NQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
++ +EA++ M ++ R ++ L G G V DAK+ F M G ++ IY
Sbjct: 388 SKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 447
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE---- 435
++ C+ + EA EL ++ + FN ++ GLC+ G + TA +L E
Sbjct: 448 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 507
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E+++ P Y+ +I C G A++L +M G PD +T+ +L+
Sbjct: 508 EELQ-------PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLI 556
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 217/481 (45%), Gaps = 68/481 (14%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL---- 56
M +S +PP S F ++ GL + + + V + + ++P N +L+ L
Sbjct: 87 MMYSNPTPPLSS-FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVN 145
Query: 57 -VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
V E + + R+ G D TY L+KGLC+ +R+ L M+ G PN
Sbjct: 146 RVGEGLAVMAGILRR-----GYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPN 200
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDM----------EEPNDVTFSILICAYCK------ 159
++ Y TL+ LC+ G + A L +M +P +++SI+I A CK
Sbjct: 201 AITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDE 260
Query: 160 -----EENLVNALV----------------LLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
EE V + L + + G P+VVT ++++LC G+V
Sbjct: 261 ARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKV 320
Query: 199 MDAVEILEESGEQGRLGK-------VKGGC---------RFLKEMERKGCLPNVDTYNIL 242
++A ++LE ++G + ++G C M KGC P+V Y +L
Sbjct: 321 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVL 380
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+ YC+T ++ A+ ++N M G + TY L+ GL GG++ D K+ +M+
Sbjct: 381 INGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK--VY 438
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDA 360
G G + Y L GL + EA+E +++ + L G C G +E A
Sbjct: 439 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 498
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F+++ +E P+VV Y+ +IH +C+ +V +A+ L ++M +G P T+ T++ G
Sbjct: 499 WELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRG 558
Query: 421 L 421
Sbjct: 559 F 559
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 220/478 (46%), Gaps = 45/478 (9%)
Query: 60 DIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+I +AF + MM S ++ L+ GL F L + M+ G+ P+
Sbjct: 74 NITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCT 133
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
N L++ LC +VG ++M+ + P+ VT++ LI C E + A +L +
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G P+ +T +++ LC G + A+++ +E L G F P
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY----GINFK---------P 240
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
V +Y+I+I + C+ D A D+F +MK+ G++ ++Y +L+ ++ ++
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLF 292
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
M + +G + + +N ++ L +E + EA + L+ M + + P + + I GFC
Sbjct: 293 NEMVN--QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 350
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+ G++ A+ F M +G P+V+ Y LI+ YC+ +V EA +L M G P
Sbjct: 351 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 410
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGFQSASML 471
T+ +L+GL + G VG A KL M+ G +PG + Y + LC+ G A L
Sbjct: 411 TYGALLTGLFQGGKVGDAKKLFGV-MKVYG---IPGDLYIYGIFLNGLCKNGCLFEAMEL 466
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQ----QTTWLLLLLLNE------MVSFVMVVHEL 519
++ I D +N L+ L + +T W L L + +V++ +++HE
Sbjct: 467 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 524
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 175/382 (45%), Gaps = 42/382 (10%)
Query: 127 CKNGKVGRARS------LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + ++ +M P +F+ L+ K ++ L + G P
Sbjct: 70 CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T+ +L LC+V RV GE G + + R+G +P++ TY
Sbjct: 130 DCCTLNILLNCLCNVNRV----------GE---------GLAVMAGILRRGYIPDIVTYT 170
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI C + A +F M+ G + N +TY TL++GLC G I LK+ Q M +
Sbjct: 171 TLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLND 230
Query: 301 KE----GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
K + Y+ ++ L ++ ++DEA + ++M + + P + + +
Sbjct: 231 SSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW----- 285
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
E+AKR F++M+ +G PNVV ++ LI C+E +V EA +L++ M G +P T+
Sbjct: 286 ---EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTY 342
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+++ G C G++ +A +L + +G P Y+ LI C+ + A L
Sbjct: 343 NSLIEGFCLVGDLNSARELF---VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 399
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M+ G PD T+ +LL L Q
Sbjct: 400 MLQVGKRPDVKTYGALLTGLFQ 421
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 27/293 (9%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTY 84
R+ N++V + P++ FN ++DVL KE + + M+ G+ + TY
Sbjct: 290 RLFNEMVNQ-------GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTY 342
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-- 142
L++G CL + +L M S+G +P+ + Y LI+ CK KV A L + M
Sbjct: 343 NSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ 402
Query: 143 --EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ P+ T+ L+ + + +A L +G D+ L LC G + +
Sbjct: 403 VGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFE 462
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A+E+ + + GK++ +++ ++ P+V TYNI+I
Sbjct: 463 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 522
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+C G + A +F M+ +G + + +TY TLIRG +++ +++L +M
Sbjct: 523 EFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 575
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 228/511 (44%), Gaps = 37/511 (7%)
Query: 11 ESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVK----EDIDLAR 65
ES + V+ RA M + + A DL S P ++ N++LD V+ D D
Sbjct: 83 ESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFF 142
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + + TY I+++ LC V L ++ RGV P+ V Y+TL+
Sbjct: 143 ASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSG 202
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF-SFGFVP 180
L K+ ++ A L+ +M + + V ++ L+ + A+ + E+ G P
Sbjct: 203 LAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASP 262
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE---SGEQG-------------RLGKVKGGCRFL 224
++ T +L+ LC +GR +A E+ + Q R G V R
Sbjct: 263 NLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVY 322
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M + G + +V YN LI +CE G A ++ GI TY+ + +GL
Sbjct: 323 SDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDS 381
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPR 340
G + + ++L+ +E+ S +++ + ++++GL + A E L+ E+L
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVT-FGTLIHGLCENGYANRAFEILEDARNSGEEL--D 438
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
S I FC DG DA + M+++G PN +Y+ LI+ +C+ ++ +A ++
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EMT +G P T+NT++ GLC+ A L +E + RG P Y+ LI+ LC
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLE---RGFKPDIRTYASLIRGLC 555
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
A + +++ G+ D + N L+
Sbjct: 556 RDKKVDVALRIWDEILDAGLQVDVMVHNILI 586
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 233/507 (45%), Gaps = 30/507 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
PD + T++ GL + +++ + D + + + +N++L + + + A
Sbjct: 191 PDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKV 250
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + G + TY +++ GLC R + ++ M + + ++V Y LIH LC
Sbjct: 251 WEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLC 310
Query: 128 KNGKVGRARSLMSDMEEPN---DVT-FSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++G V A + SDM + DV+ ++ LI +C+ A + S F + +
Sbjct: 311 RSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWD-STGFSGIRQIT 369
Query: 184 TITKVLELLCSVGRVMDAVEILEE-------SGEQGRLGK-VKGGCR---------FLKE 226
T + + L G V +A E+L++ S ++ G + G C L++
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
G +V +Y+ +I+ +C+ G A +V+ +M DG N Y+ LI G C +
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDR 344
I+D +KI +E + G I YN+++ GL + + EA K+M E+ F P
Sbjct: 490 INDAIKIY--IEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTY 547
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C D V+ A R +D++++ G +V++++ LIH C +V EA + EM
Sbjct: 548 ASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKE 607
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P T+NT++ G G++ A L + G P Y+ IK LC
Sbjct: 608 KNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAIL---DNGLKPDIVTYNTRIKGLCSCNR 664
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+LL +++ GI+P +TW+ L+
Sbjct: 665 TPEGVLLLNEVLATGIMPTVITWSILV 691
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 177/402 (44%), Gaps = 32/402 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I GL R+ ++ + + + + + ++NS L+K ++ R
Sbjct: 298 DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNS----LIKGFCEVGRTGEA 353
Query: 70 KKMM-ASGVQG--DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHS 125
K ++G G TY I+ KGL + V + +LL +++ P+ V + TLIH
Sbjct: 354 WKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHG 413
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC+NG RA ++ D EE + ++S +I +CK+ +A + + G P+
Sbjct: 414 LCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPN 473
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
++ C V ++ DA++I E G + K + K
Sbjct: 474 SHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTK 533
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +G P++ TY LI C +D AL +++++ G+ + + ++ LI GLCS G
Sbjct: 534 EMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAG 593
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
++D+ I +E ++ + YN+++ G Y D+A + L P V
Sbjct: 594 KVDEAFCIY--LEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+ +I G C + ++++ G +P V+ + L+ A
Sbjct: 652 YNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRA 693
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 23/246 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ +I G R IND +K ++ P++ +N+++D L K + +
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M+ G + D TYA L++GLC +V ++ + G++ + +++N LIH LC
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A + +M+E PN VT++ L+ + + ++ A L G PD+VT
Sbjct: 592 AGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LCS R + G L E+ G +P V T++IL+
Sbjct: 652 YNTRIKGLCSCNRTPE-------------------GVLLLNEVLATGIMPTVITWSILVR 692
Query: 245 SYCETG 250
+ + G
Sbjct: 693 AVIKYG 698
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 41 NMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
N +P+L +N+++D + ID A + + ++ +G++ D TY +KGLC NR +
Sbjct: 609 NCSPNLVTYNTLMDGFYEIGSIDKAASLW-TAILDNGLKPDIVTYNTRIKGLCSCNRTPE 667
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G LL+ + + G+ P + ++ L+ ++ K G +
Sbjct: 668 GVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 134/484 (27%), Positives = 224/484 (46%), Gaps = 43/484 (8%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFY-RKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
N TP L F +L L K ++ FY +M SG+ D T IL+ LC NRVG+
Sbjct: 91 NPTPPLSSFTHLLSGLAKIK-HYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGE 149
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
G ++ + RG P+ V Y TLI LC ++ +A L + M++ PN +T+ L+
Sbjct: 150 GLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 156 AYCKEENLVNALVLLEKS------FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
C+ N+ AL L ++ + F P V++ + +++ LC R +A ++ EE
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 210 EQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
QG GK + R EM +G PNV T+N+LI C+ G +
Sbjct: 270 VQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 329
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A D+ M GI N +TY++LI G C G ++ ++ M +G + + Y
Sbjct: 330 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPS--KGCEPDVICYTV 387
Query: 314 VLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEG 371
++ G + ++ +EA++ M ++ R ++ L G G V DAK+ F M G
Sbjct: 388 LINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYG 447
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
++ IY ++ C+ + EA EL ++ + FN ++ GLC+ G + TA
Sbjct: 448 IPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAW 507
Query: 432 KLVE----EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+L E E+++ P Y+ +I C G A++L +M G PD +T+
Sbjct: 508 ELFEKLPQEELQ-------PDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITY 560
Query: 488 NSLL 491
+L+
Sbjct: 561 ATLI 564
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 204/425 (48%), Gaps = 33/425 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I+GL I+ + + TP+ + +++ L + +I +A
Sbjct: 164 PDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKL 223
Query: 68 YRKKMMASGVQGDDY-----TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+++ + S + G ++ +Y+I++ LC R + L MK +G+ P + Y +L
Sbjct: 224 HQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSL 283
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
IH C GK A+ L ++M +PN VTF++LI CKE ++ A LLE G
Sbjct: 284 IHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGI 343
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+++T ++E C VG + A E+ M KGC P+V
Sbjct: 344 VPNLLTYNSLIEGFCLVGDLNSARELFVS-------------------MPSKGCEPDVIC 384
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y +LI+ YC+T ++ A+ ++N M G + TY L+ GL GG++ D K+ +M+
Sbjct: 385 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 444
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
G G + Y L GL + EA+E +++ + L G C G
Sbjct: 445 --VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E A F+++ +E P+VV Y+ +IH +C+ +V +A+ L ++M +G P T+ T
Sbjct: 503 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 562
Query: 417 VLSGL 421
++ G
Sbjct: 563 LIRGF 567
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 225/478 (47%), Gaps = 37/478 (7%)
Query: 60 DIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+I +AF + MM S ++ L+ GL F L + M+ G+ P+
Sbjct: 74 NITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCT 133
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
N L++ LC +VG ++M+ + P+ VT++ LI C E + A +L +
Sbjct: 134 LNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQ 193
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G P+ +T +++ LC G + A+++ +E L G F P
Sbjct: 194 KLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY----GINFK---------P 240
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
V +Y+I+I + C+ D A D+F +MK+ G++ ++Y +LI G C GG+ ++ ++
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLF 300
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
M + +G + + +N ++ L +E + EA + L+ M + + P + + I GFC
Sbjct: 301 NEMVN--QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 358
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+ G++ A+ F M +G P+V+ Y LI+ YC+ +V EA +L M G P
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVK 418
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGFQSASML 471
T+ +L+GL + G VG A KL M+ G +PG + Y + LC+ G A L
Sbjct: 419 TYGALLTGLFQGGKVGDAKKLFGV-MKVYG---IPGDLYIYGIFLNGLCKNGCLFEAMEL 474
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQ----QTTWLLLLLLNE------MVSFVMVVHEL 519
++ I D +N L+ L + +T W L L + +V++ +++HE
Sbjct: 475 FNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEF 532
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 180/382 (47%), Gaps = 34/382 (8%)
Query: 127 CKNGKVGRARS------LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + ++ +M P +F+ L+ K ++ L + G P
Sbjct: 70 CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D T+ +L LC+V RV + + ++ G L R+G +P++ TY
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMA-----GIL--------------RRGYIPDIVTYT 170
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI C + A +F M+ G + N +TY TL++GLC G I LK+ Q M +
Sbjct: 171 TLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLND 230
Query: 301 KE----GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
K + Y+ ++ L ++ ++DEA + ++M + + P + + I GFC
Sbjct: 231 SSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCG 290
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G E+AKR F++M+ +G PNVV ++ LI C+E +V EA +L++ M G +P T+
Sbjct: 291 GKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTY 350
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N+++ G C G++ +A +L + +G P Y+ LI C+ + A L
Sbjct: 351 NSLIEGFCLVGDLNSARELF---VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNG 407
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M+ G PD T+ +LL L Q
Sbjct: 408 MLQVGKRPDVKTYGALLTGLFQ 429
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 27/293 (9%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTY 84
R+ N++V + P++ FN ++DVL KE + + M+ G+ + TY
Sbjct: 298 RLFNEMVNQ-------GVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTY 350
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-- 142
L++G CL + +L M S+G +P+ + Y LI+ CK KV A L + M
Sbjct: 351 NSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQ 410
Query: 143 --EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ P+ T+ L+ + + +A L +G D+ L LC G + +
Sbjct: 411 VGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFE 470
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A+E+ + + GK++ +++ ++ P+V TYNI+I
Sbjct: 471 AMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIH 530
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+C G + A +F M+ +G + + +TY TLIRG +++ +++L +M
Sbjct: 531 EFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 226/488 (46%), Gaps = 52/488 (10%)
Query: 89 KGLCLTNRVGDGFKLLHV--------------MKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+GL LT RV + L+ M +RGV P+S Y +I C+NG V
Sbjct: 790 QGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLE 849
Query: 135 ARSLMSDMEEP----NDVTFSILICAYCKEENLVN-ALVLLEKSFSFGFVPDVVTITKVL 189
A + +M E ++ T +++I A+C E++LVN A+ K G P+++ + ++
Sbjct: 850 ADRWICEMMERGFVVDNATLTLIITAFC-EKSLVNRAVWFFHKVTKMGLSPNLINYSSMI 908
Query: 190 ELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR----------FLKEMERKGC 232
LC G V A E+LEE + G + G C+ FLK +
Sbjct: 909 SGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNY 968
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV TY +IS YC+ L A +F MK G+ N TY TLI G C G +
Sbjct: 969 KPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYE 1028
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILG 350
+++LM S EG YNS++ GL + + +EA + L ++ V ++ I
Sbjct: 1029 LMELM--SNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE 1086
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C ++ A ++M + G P++ +Y LI A+C++ ++++ +L E+ G P
Sbjct: 1087 QCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 1146
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ +++ G CR+ V A+K + + G P S Y LI LC++ A
Sbjct: 1147 KETYTSMICGYCREKKVSLAVKFFQ---KMSDHGCAPDSISYGALISGLCKESRLDEARQ 1203
Query: 471 LLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLL--LNEMVSFVMVVHELSAK---E 523
L M+ KG+ P +T +L C ++ +++L LN+ + ++ VH L K E
Sbjct: 1204 LYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKL-WIRTVHTLIRKLCCE 1262
Query: 524 KRCKLRSL 531
K+ L +L
Sbjct: 1263 KKVALAAL 1270
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 25/269 (9%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARA-FYRKKMMASGVQGDDYTYAILMKGLCLT 94
L+ N P++ + +++ KE+ L+RA ++M G+ + TY L+ G C
Sbjct: 962 LIRSDNYKPNVHTYTAMISGYCKEE-KLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKA 1020
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS----DMEEPNDVTF 150
++L+ +M + G PN+ YN+++ LCK G+ A L++ + E + VT+
Sbjct: 1021 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 1080
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ILI CK ++ ALV L K F GF PD+ T ++ C
Sbjct: 1081 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFC----------------- 1123
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
R +K + E+ + G P +TY +I YC + A+ F M G + +
Sbjct: 1124 --RQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPD 1181
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMED 299
++Y LI GLC R+D+ ++ M D
Sbjct: 1182 SISYGALISGLCKESRLDEARQLYDTMID 1210
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 142/303 (46%), Gaps = 12/303 (3%)
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C++ R + VE + G +GK+K + +M +G + N +I E ++
Sbjct: 755 CNLERAHEVVECM--VGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLV 812
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK-ILQLMEDSKEGSKGRISPY 311
+ A +VF++M G+ + TY +I G C G + + + I ++ME G +
Sbjct: 813 EYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMME---RGFVVDNATL 869
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
++ ++ + A+ + ++ K L P ++ S I G C G+V+ A ++M++
Sbjct: 870 TLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVK 929
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASEL-MKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G PNV + LIH C++ A L +K + Y P T+ ++SG C++ +
Sbjct: 930 NGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLS 989
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L E R +G +P + Y+ LI C+ G F A L+ M +G P+ T+N
Sbjct: 990 RAEMLFE---RMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYN 1046
Query: 489 SLL 491
S++
Sbjct: 1047 SIV 1049
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 174/428 (40%), Gaps = 64/428 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ + ++I GL + + + + + + P++ S++ L K+ RAF
Sbjct: 899 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGW-TERAFR 957
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ K + + + + +TY ++ G C ++ L MK +G+ PN+ Y TLI
Sbjct: 958 LFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGH 1017
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G +A LM M PN T++ ++ CK A LL F D
Sbjct: 1018 CKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADG 1077
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T ++ EQ + + FL +M + G P++ Y L
Sbjct: 1078 VTYTILI-------------------SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTL 1118
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+++C ++ + +F+++ G++ TY ++I G C ++ +K Q M D
Sbjct: 1119 IAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSD--H 1176
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G Y +++ GL +E++ DE A++
Sbjct: 1177 GCAPDSISYGALISGLCKESRLDE---------------------------------ARQ 1203
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+D MI++G P V L + YC+ E A +++ + ++ T +T++ LC
Sbjct: 1204 LYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWI---RTVHTLIRKLC 1260
Query: 423 RQGNVGTA 430
+ V A
Sbjct: 1261 CEKKVALA 1268
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 3/166 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD ++ T+I R M+ D K D V + + P+ + + S++ +E + LA F
Sbjct: 1110 PDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKF 1169
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +KM G D +Y L+ GLC +R+ + +L M +G+ P V TL + C
Sbjct: 1170 F-QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYC 1228
Query: 128 KNGKVGRARSLMSDMEEPNDV-TFSILICAYCKEENLVNALVLLEK 172
K A ++ + + + T LI C E+ + A + K
Sbjct: 1229 KTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHK 1274
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 231/504 (45%), Gaps = 29/504 (5%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +++ ++ GR + + V + + ++ P++ +N+I+ VLV D A Y
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M G+ D Y++ I MK C T+R +LL+ M S+G + N V Y T++ +
Sbjct: 136 R-MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 130 GKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
L M TF+ L+ CK+ ++ LL+K G +P++ T
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEMER 229
++ LC G + AV ++ EQG V G C+ +L +M
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+G P+ TYN LI+ YC+ G++ A + D +G + TY +LI GLC G +
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
L + E +G K + YN+++ GL + EA + +M + L P ++
Sbjct: 375 ALALFN--EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G C G V DA MI +G P++ ++ LIH Y + ++ A E++ M +G
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+N++L+GLC+ + E + +G P ++ L+++LC
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVM---ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL +M K + PD +T+ +L+
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLI 573
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 206/449 (45%), Gaps = 31/449 (6%)
Query: 46 LKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL 104
L FN +L VL K+ D+ K++ GV + +TY + ++GLC + +++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLL-DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKE 160
+ +G KP+ + YN LI+ LCKN K A + M EP+ T++ LI YCK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
+ A ++ + GFVPD T +++ LC G A+ + E+ LGK
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA-----LGK---- 385
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
G PNV YN LI G++ A + N+M G+ T++ L+ G
Sbjct: 386 ----------GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
LC G + D ++++M +G I +N +++G + + + ALE L M +
Sbjct: 436 LCKMGCVSDADGLVKVM--ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + G C ED + M+E+G PN+ ++ L+ + C+ ++ EA L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++EM P A TF T++ G C+ G++ A L + S + Y+ +I A
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS--STPTYNIIIHA 611
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTW 487
EK A L +MV + + PD T+
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 224/482 (46%), Gaps = 31/482 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + I+GL + ++ V+ + P + +N+++ L K Y
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ G++ D YTY L+ G C V +++ G P+ Y +LI LC
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ RA +L ++ +PN + ++ LI + ++ A L + G +P+V T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC +G V DA + +K M KG P++ T+NILI
Sbjct: 429 FNILVNGLCKMGCVSDADGL-------------------VKVMISKGYFPDIFTFNILIH 469
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y +++AL++ + M +G+ + TY++L+ GLC + +D ++ + M ++G
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM--VEKGC 527
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ +N +L L R + DEAL L++M+ + P AV I GFC +G+++ A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 363 CFDQMIEEGGVPNVV-IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M E V + Y+ +IHA+ ++ V A +L +EM P T+ ++ G
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ GNV K + E M G +P +I LC + A+ ++ +MV KG++
Sbjct: 648 CKTGNVNLGYKFLLEMME---NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 482 PD 483
P+
Sbjct: 705 PE 706
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 188/417 (45%), Gaps = 42/417 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G + M+ + P + S++D L E + + A A
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + G++ + Y L+KGL + + +L + M +G+ P +N L++ LC
Sbjct: 379 FNEAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A L+ M P+ TF+ILI Y + + NAL +L+ G PDV
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L LC + D +E K M KGC PN+ T+NIL+
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETY-------------------KTMVEKGCAPNLFTFNILL 538
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S C LD AL + +MK ++ + VT+ TLI G C G +D + + ME++ +
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR---------SLKILGFCVD 354
S + YN +++ E L + EKLF VDR L + GFC
Sbjct: 599 SSSTPT-YNIIIHAF------TEKLN-VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
GNV + +M+E G +P++ +I+ C E+RV EA+ ++ M G +P A
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 164/363 (45%), Gaps = 51/363 (14%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR GKV+ + M+ C P V +YN ++S ++G D A V+ M+ GI+ +
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
++ ++ C R L++L M S +G + + Y +V+ G Y EN + E E
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNM--SSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 332 KQM----------------------------EKLFPRAVDR---------SLKILGFCVD 354
+M EKL + + R +L I G C
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++ A R +IE+G P+V+ Y+ LI+ C+ + +EA + +M G P + T+
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT+++G C+ G V A ++V + + G +P Y LI LC +G A L +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGD---AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHL 534
+GKGI P+ + +N+L+ LS Q L + +E+S K ++++ N L
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMIL---------EAAQLANEMSEKGLIPEVQTFNIL 432
Query: 535 AHG 537
+G
Sbjct: 433 VNG 435
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 30/420 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y MK +V + + M +P YN ++ L +G +A + M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ +F+I + ++CK AL LL S G +VV V VG
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV------VGG-- 190
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
EE+ + G +M G + T+N L+ C+ G + +
Sbjct: 191 ----FYEENFKAE-------GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ + G+ N TY+ I+GLC G +D ++++ + ++G K + YN+++YGL
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL--IEQGPKPDVITYNNLIYGLC 297
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ ++ EA YL +M E L P + + I G+C G V+ A+R + G VP+
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y LI C E A L E G G P +NT++ GL QG + A +L E
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G +P ++ L+ LC+ G A L+ M+ KG PD T+N L+ S Q
Sbjct: 418 SE---KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 28/342 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T+I+GL MI + + + +S + P ++ FN +++ L K
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M++ G D +T+ IL+ G ++ + ++L VM GV P+ YN+L++ LCK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K M E PN TF+IL+ + C+ L AL LLE+ + PD VT
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C G + A + + E ++ + TYNI+I
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS------------------STPTYNIIIH 610
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK-ILQLMEDSKEG 303
++ E + A +F +M + + TY ++ G C G ++ G K +L++ME+ G
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN---G 667
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
++ V+ L E++ EA + +M + L P AV+
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 566
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 212/441 (48%), Gaps = 29/441 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D L++ C R + +++ +++ G ++ YN LI++ CK+G+
Sbjct: 95 MTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGE 154
Query: 132 VGRA-RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+ A R L PN T+ ++C+ C L A+ +L++ PDVVT T +++
Sbjct: 155 IEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLID 214
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
C +ESG V + EM KGC P+V TYN+LI +C+ G
Sbjct: 215 ATC------------KESG-------VGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
LD A+ + G + ++++ ++R LCSGGR D +K+L M ++G +
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATM--LRKGCFPSVVT 313
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK--ILGFCVDGNVEDAKRCFDQMI 368
+N ++ L ++ +AL L+ M K RS I GFC ++ A + M+
Sbjct: 314 FNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV 373
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P++V Y+ L+ A C++ +V +A ++ +++ G P ++NTV+ GL + G
Sbjct: 374 SRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAE 433
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A++L+EE +G P + ++ L +G A + G GI P+ +N
Sbjct: 434 LAVELLEEMCY---KGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYN 490
Query: 489 SLL--ICLSQQTTWLLLLLLN 507
S++ +C +QQT+ + L++
Sbjct: 491 SIMMGLCKAQQTSLAIDFLVD 511
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 214/489 (43%), Gaps = 65/489 (13%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + + +I ++ I + ++ D S + P+ ++++L L
Sbjct: 138 DANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLKQAMQVL 194
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ + S D T +L+ C + VG KL + M+ +G KP+ V YN LI CK
Sbjct: 195 DRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKE 254
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
G+ L A++ L+K S+G DV++ +L
Sbjct: 255 GR-------------------------------LDEAIIFLKKLPSYGCQSDVISHNMIL 283
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
LCS GR MDA+ + L M RKGC P+V T+NILI+ C+
Sbjct: 284 RSLCSGGRWMDAM-------------------KLLATMLRKGCFPSVVTFNILINFLCQK 324
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G+L AL+V M G + N +++ LI+G C+ ID ++ L++M G I
Sbjct: 325 GLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIM--VSRGCYPDIV 382
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN +L L ++ + D+A+ L Q+ P + + I G G E A ++M
Sbjct: 383 TYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 442
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+G P+++ ++ +E +V EA + + G G P A +N+++ GLC+
Sbjct: 443 CYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQT 502
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A+ + DM + G P Y+ LIK + +G + AS L ++ +G L
Sbjct: 503 SLAIDFL-VDM--VANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG-----LVK 554
Query: 488 NSLLICLSQ 496
SL++ +SQ
Sbjct: 555 KSLIVKVSQ 563
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 167/358 (46%), Gaps = 60/358 (16%)
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
LE + G +PDVV T ++ C +GR +A R + +E
Sbjct: 91 FLEYMTNKGKIPDVVACTALIREFCKIGRTKNAT-------------------RIMGILE 131
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G + + ++YN+LI++YC++G ++ AL V + ++ N TYD ++ LC G++
Sbjct: 132 ESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTS---VAPNAATYDAVLCSLCDRGKLK 188
Query: 289 DGLKILQLMEDSK---------------------------------EGSKGRISPYNSVL 315
+++L SK +G K + YN ++
Sbjct: 189 QAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLI 248
Query: 316 YGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G +E + DEA+ +LK++ ++ + ++ + C G DA + M+ +G
Sbjct: 249 KGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCF 308
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+VV ++ LI+ CQ+ + +A +++ M HG+ P + +FN ++ G C + + A++
Sbjct: 309 PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEH 368
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+E + RG P Y+ L+ ALC+ G A ++L Q+ KG P +++N+++
Sbjct: 369 LE---IMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 423
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 150/321 (46%), Gaps = 45/321 (14%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R G+++ G RFL+ M KG +P+V LI +C+ G +A + ++ G +
Sbjct: 81 RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL- 331
+Y+ LI C G I++ L++L + + Y++VL L + +A++ L
Sbjct: 141 SYNVLINAYCKSGEIEEALRVLDHTSVAPNA-----ATYDAVLCSLCDRGKLKQAMQVLD 195
Query: 332 KQME-KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+Q++ K +P V ++ I C + V A + F++M +G P+VV Y+ LI +C+E
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255
Query: 391 RVREASELMKEMTGH-----------------------------------GYLPIASTFN 415
R+ EA +K++ + G P TFN
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ LC++G +G AL ++E + G P S ++PLI+ C + G A L M
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPK---HGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIM 372
Query: 476 VGKGILPDYLTWNSLLICLSQ 496
V +G PD +T+N LL L +
Sbjct: 373 VSRGCYPDIVTYNILLTALCK 393
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 4/150 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++ L + ++D V +S +PSL +N+++D L+K
Sbjct: 379 PDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVEL 438
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G++ D T ++ GL +V + K H +K G+KPN+ IYN+++ LCK
Sbjct: 439 LEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCK 498
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILI 154
+ A + DM +P + +++ LI
Sbjct: 499 AQQTSLAIDFLVDMVANGCKPTEASYTTLI 528
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD +V+ GL R +++ +K + F + P+ I+NSI+ L K +
Sbjct: 449 PDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDF 508
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
M+A+G + + +Y L+KG+ + KL + + SRG+ S+I
Sbjct: 509 LVDMVANGCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLI 558
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 230/507 (45%), Gaps = 38/507 (7%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKG 90
+A + R P+L N+ILD LVK + LAR + +M+ G+ TY L+
Sbjct: 124 EALSVFGRLRELPALPACNAILDGLVKAHM-LARVWELFDEMLGRGMVPSVVTYNTLINA 182
Query: 91 LCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PN 146
V +++ M +R + PN V Y T+I +LC+ +G A L +M+E PN
Sbjct: 183 CRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPN 242
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
T++ L+ ++ K +N+ +ALV G VP+ V T +++ LC R+ +A I
Sbjct: 243 LYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNI-- 300
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
FL +M R P V YN LI +G AL F ++ G
Sbjct: 301 ----------------FL-DMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKG 343
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + T ++RGLC GG++ + L++M+ S G + YN ++ + DE
Sbjct: 344 LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS--GIALNAAAYNVLIDEYCKSGNLDE 401
Query: 327 ALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
AL +M ++ P V S I G +G +E A + +M+ +G PNVV Y LIH
Sbjct: 402 ALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 461
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE---DMRGI 441
+ + + A L KEM G A T + ++ GLCR+ V A++ + E +
Sbjct: 462 GHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSE 521
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
S+ S Y LI L G + A M G++PD T+ ++ L +
Sbjct: 522 KNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLC-----M 576
Query: 502 LLLLLNEMVSFVMVVHELSAKEKRCKL 528
L +LN M+ + +V ++ K +C +
Sbjct: 577 LGYVLNAMMLYADMV-KVGVKPTKCAM 602
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 181/443 (40%), Gaps = 63/443 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + T+I L I D + M P+L +N+++ K D I A F
Sbjct: 206 PNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++ G+ +D + L+ GLC NR+ + + M V P +YN+LIH
Sbjct: 266 Y-YDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAF 324
Query: 128 KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
++G Y +E AL ++ G PD T +
Sbjct: 325 RSG--------------------------YAQE-----ALAFFQEIIRKGLRPDEFTCSI 353
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
V+ LC G++ A RFL+ M++ G N YN+LI YC
Sbjct: 354 VVRGLCDGGQMQVAT-------------------RFLEVMQQSGIALNAAAYNVLIDEYC 394
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
++G LD AL M G+ N VTY +LI G G ++ + I M +G +
Sbjct: 395 KSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM--VAKGVEPN 452
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF- 364
+ Y ++++G + D A K+ME+ ++ A+ S+ + G C + V+DA R
Sbjct: 453 VVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIM 512
Query: 365 -----DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
+ + + N V Y LI+ + + EA M G +P T+ V+
Sbjct: 513 EYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIR 572
Query: 420 GLCRQGNVGTALKLVEEDMRGIG 442
GLC G V A+ L DM +G
Sbjct: 573 GLCMLGYVLNAMMLY-ADMVKVG 594
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 236/497 (47%), Gaps = 65/497 (13%)
Query: 46 LKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL 104
L FN +L VL K+ D+ K++ GV + +TY ++GLC + +++
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLL-DKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMV 274
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR----SLMSDMEEPNDVTFSILICAYCK- 159
+ +G KP+ V YN LI+ LCKN K A L+++ EP+ T++ LI YCK
Sbjct: 275 GRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKG 334
Query: 160 ------EENLVNA----------------------------LVLLEKSFSFGFVPDVVTI 185
E LVNA L L ++ G P+V+
Sbjct: 335 GMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR---------FLKEMER 229
+++ L + G +++A ++ E E+G + +V+ G C+ +K M
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
KG P++ T+NILI Y +++AL++ + M +G+ + TY++L+ GLC + +D
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
++ + M ++G + +N +L L R ++ D+AL L++M+ + P AV
Sbjct: 515 VMETYKTM--VEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTL 572
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I GFC +G+++ A F +M E V + Y+ +IHA+ ++ V A +L +EM
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ ++ G C+ GNV K + E M G +P +I LC +
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMME---NGFIPSLTTLGRVINCLCVEDRVY 689
Query: 467 SASMLLVQMVGKGILPD 483
A+ ++ +MV KG++P+
Sbjct: 690 EAAGIIHRMVQKGLVPE 706
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/523 (24%), Positives = 231/523 (44%), Gaps = 67/523 (12%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +++ ++ GR + + V + + ++ P++ +N+I+ +LV D A Y
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYM 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY---------- 119
+ M G+ D Y++ I MK C T+R +LL+ M S+G + N V Y
Sbjct: 136 R-MRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 120 -------------------------NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
N L+H LCK G V L+ + + PN T+
Sbjct: 195 NFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ I C++ L A+ ++ + G PDVVT ++ LC + +A E+
Sbjct: 255 NFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEA-EV------ 307
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
+L ++ +G P+ TYN LI+ YC+ G++ A + + +G +
Sbjct: 308 ------------YLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPD 355
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
TY +LI GLC G + L + E +G K + YN+++ GL + EA +
Sbjct: 356 EFTYRSLIDGLCHEGETNRALALFN--EALGKGIKPNVILYNTLIKGLSNQGLILEAAQL 413
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+M + L P ++ + G C G V DA MI +G P++ ++ LIH Y
Sbjct: 414 ASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ ++ A E++ M +G P T+N++L+GLC+ + E + +G P
Sbjct: 474 QLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVM---ETYKTMVEKGCAPN 530
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ L+++LC A LL +M K + PD +T+ +L+
Sbjct: 531 LFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLI 573
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 181/393 (46%), Gaps = 42/393 (10%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G D++TY L+ GLC L + +G+KPN ++YNTLI L G +
Sbjct: 350 NGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILE 409
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L S+M E P TF+IL+ CK + +A L++ S G+ PD+ T ++
Sbjct: 410 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
+ ++ +A+EIL+ + G + K + K M KGC P
Sbjct: 470 GYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAP 529
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N+ T+NIL+ S C LD AL + +MK ++ + VT+ TLI G C G +D +
Sbjct: 530 NLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR---------S 345
+ ME+ S YN +++ E L + EKLF VDR
Sbjct: 590 RKMEEVYMVS-CSTPTYNIIIHAF------TEKLN-VTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
L + GFC GNV+ + +M+E G +P++ +I+ C E+RV EA+ ++ M
Sbjct: 642 LMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
G +P A NT+ A KLV ED+
Sbjct: 702 GLVPEA--VNTIFD---HDKKEVAAPKLVLEDL 729
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 168/363 (46%), Gaps = 51/363 (14%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR GKV+ + M+ C P V +YN ++S ++G D A V+ M+ GI+ +
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
++ ++ C R L++L M S +G + + Y +V+ G Y EN +DE E
Sbjct: 147 YSFTIRMKSFCRTSRPHAALRLLNNM--SSQGCEMNVVAYCTVVGGFYEENFKDEGYELF 204
Query: 332 KQM----------------------------EKLFPRAVDR---------SLKILGFCVD 354
+M EKL + + R + I G C
Sbjct: 205 GKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQK 264
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++ A R ++I++G P+VV Y+ LI+ C+ + +EA + ++ G P + T+
Sbjct: 265 GELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTY 324
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT+++G C+ G V A +++ + + G +P Y LI LC +G A L +
Sbjct: 325 NTLIAGYCKGGMVQLAERIL---VNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNE 381
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHL 534
+GKGI P+ + +N+L+ LS Q L+L ++ S E+S K ++++ N L
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQG---LILEAAQLAS------EMSEKGLIPEVQTFNIL 432
Query: 535 AHG 537
+G
Sbjct: 433 VNG 435
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 180/420 (42%), Gaps = 30/420 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y MK +V + + M +P YN ++ L +G +A + M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR 138
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ +F+I + ++C+ AL LL S G +VV V VG
Sbjct: 139 DRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTV------VGGFY 192
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+ E ++ G + +M G + T+N L+ C+ G + +
Sbjct: 193 E--ENFKDEGYE-----------LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLL 239
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ + G+ N TY+ I+GLC G +D ++++ + D +G K + YN ++YGL
Sbjct: 240 DKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLID--QGPKPDVVTYNYLIYGLC 297
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ ++ EA YL ++ E L P + + I G+C G V+ A+R + G VP+
Sbjct: 298 KNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEF 357
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y LI C E A L E G G P +NT++ GL QG + A +L E
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G +P ++ L+ LC+ G A L+ M+ KG PD T+N L+ S Q
Sbjct: 418 SE---KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 134/328 (40%), Gaps = 57/328 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK----EDID-- 62
P+ ++ T+I+GL +I + + +S + P ++ FN +++ L K D D
Sbjct: 389 PNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 63 ----LARAFYRK-------------------------KMMASGVQGDDYTYAILMKGLCL 93
+++ ++ MM +GV D YTY L+ GLC
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCK 508
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
T++ D + M +G PN +N L+ SLC+ K+ +A L+ +M+ P+ VT
Sbjct: 509 TSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVT 568
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F LI +CK +L A L K + +V + CS + E
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRK------------MEEVYMVSCSTPTYNIIIHAFTEK- 615
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
V + +EM + P+ TY +++ +C+TG +D +M +G
Sbjct: 616 -----LNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIP 670
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+ T +I LC R+ + I+ M
Sbjct: 671 SLTTLGRVINCLCVEDRVYEAAGIIHRM 698
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 243/519 (46%), Gaps = 55/519 (10%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+ +VVK V TP LK + D + +D+ ++M D ++ I
Sbjct: 110 LGNVVKKGFRVEAITFTPLLKGLCA--DKRTSDAMDIVL----RRMTELSCMPDVFSCTI 163
Query: 87 LMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
L+KGLC NR + +L H+M + G P+ V Y T+I+ K G G+A S +M
Sbjct: 164 LLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEML 223
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ VT+S +I A CK + + A+ +L G +P+ T T ++ CS G+
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPK 283
Query: 200 DAVEILEESGEQG---------------------RLGKVKGGCRFLKEMERKGCLPNVDT 238
+A+ L++ G G + G L M R G P+
Sbjct: 284 EAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYV 343
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNILI +Y + G +D A+ VF+ M+ G++ + VTY +I LC GR++D + + M
Sbjct: 344 YNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMI 403
Query: 299 DSKEG-SKGRISPYNSVLYGLYRENQQDEALEYLKQM-------EKLFPRAVDRSLKILG 350
D EG S G I YNS+++GL N+ + A E + +M +F ++ I
Sbjct: 404 D--EGLSPGNIV-YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI-----IDS 455
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C +G V ++++ FD M+ G P+++ Y LI YC ++ EA +L+ M G P
Sbjct: 456 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ T+++G C+ +G AL L +E G P Y+ +++ L + +A
Sbjct: 516 TVTYRTLINGYCKISRMGDALVLFKEME---SSGVSPDIITYNIILQGLFQTRRTAAAKE 572
Query: 471 LLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLN 507
L V++ G + T+N +L +C ++ T L + N
Sbjct: 573 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQN 611
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 218/502 (43%), Gaps = 56/502 (11%)
Query: 18 IRGLGRARMINDVVKATDL--VSRFN---------MTPSLKIFNSILDVLVKED-IDLAR 65
I GL RA + DV + + VSR+N +TP++ + ++ + D +DL
Sbjct: 50 IYGLNRA--LADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGF 107
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL-LHVMKSRGVKPNSVIYNTLIH 124
A ++ G + + T+ L+KGLC R D + L M P+ L+
Sbjct: 108 AAL-GNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLK 166
Query: 125 SLCKNGKVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LC + A L M + P+ V+++ +I + KE + A +
Sbjct: 167 GLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRR 226
Query: 178 FVPDVVTITKVLELLCSVGRVMD-AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
PDVVT + ++ LC G+ MD A+E+L M + G +PN
Sbjct: 227 ISPDVVTYSSIIAALCK-GQAMDKAMEVL-------------------TSMVKNGVMPNC 266
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWN-----FVTYDTLIRGLCSGGRIDDGL 291
TY ++ YC +G A+ ++ DG+ + TY TL++G + G +
Sbjct: 267 RTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMH 326
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
+L LM + G YN ++ ++ + DEA+ +M + L P AV I
Sbjct: 327 ALLDLM--VRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
C G VEDA F+QMI+EG P ++Y+ LIH C + A EL+ EM G
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
FN+++ C++G V + KL + +R G P YS LI C G A
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCLAGKMDEAM 501
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
LL MV G+ P+ +T+ +L+
Sbjct: 502 KLLSGMVSVGLKPNTVTYRTLI 523
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 204/444 (45%), Gaps = 44/444 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + + T+++G + + DL+ R + P ++N ++ K+ +D A
Sbjct: 304 PDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLV 363
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM G+ D TY ++ LC + RV D M G+ P +++YN+LIH LC
Sbjct: 364 F-SKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 422
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K RA L+ +M + N + F+ +I ++CKE ++ + L + G PD++
Sbjct: 423 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 482
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ C G++ +A+++L G V G + PN TY LI
Sbjct: 483 TYSTLIDGYCLAGKMDEAMKLLS--------GMVSVGLK-----------PNTVTYRTLI 523
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+ + AL +F +M+ G+S + +TY+ +++GL R ++ + +S G
Sbjct: 524 NGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES--G 581
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--------EKLFPRAVDRSLKILGFCVDG 355
++ +S YN +L+GL + D+AL + + + F +D LK+ G
Sbjct: 582 TQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKV------G 635
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+AK F G VPN Y + + + E +L M +G + N
Sbjct: 636 RNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 695
Query: 416 TVLSGLCRQGNV---GTALKLVEE 436
++ L ++G + GT L +++E
Sbjct: 696 FIVRELLQRGEITRAGTYLSMIDE 719
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ P+ + T+I G + + D + + ++P + +N IL L +
Sbjct: 509 SVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 568
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A ++ SG Q + TY I++ GLC D ++ + +K + +N +I
Sbjct: 569 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMI 628
Query: 124 HSLCKNGKVGRARSLM----SDMEEPNDVTFSIL 153
+L K G+ G A+ L S+ PN T+ ++
Sbjct: 629 DALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLM 662
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 211/443 (47%), Gaps = 34/443 (7%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
ASG + TY L+ G C + R+ D +L+ M V P++ YNT++ LC +
Sbjct: 181 ASGA-ANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWE 236
Query: 134 RARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A LM +M PN+VTF+ I A+C+ L A+ LLE+ +G +PDVV + ++
Sbjct: 237 EAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLV 296
Query: 190 ELLCSVGRVMDAVEILE----ESGEQGRLGKVKGGC---------RFLKEMERKGCLPNV 236
GRV DA+++L +KG C + EM RK C PN
Sbjct: 297 NGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPND 356
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
T++ LI+S C+ + + A++V M+ G + V+Y+T+I DD LK+L
Sbjct: 357 ATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNS 416
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVD 354
M K +N+VL L R + +A E + +M K + + IL C +
Sbjct: 417 ML-----CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQN 471
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G V+DA F+ M + P++V Y LI+ + ++ + A +L + M + ++
Sbjct: 472 GQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADI---FSY 528
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N L GLC A +L+ DM + + LP ++ LI +LC+KG A + Q
Sbjct: 529 NATLKGLCMAARWDDAGELIA-DM--VTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQ 585
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M GI PD T+N+L+ S+Q
Sbjct: 586 MPKYGITPDIFTYNALINGYSEQ 608
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 191/420 (45%), Gaps = 39/420 (9%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
T IL+K LC R+ D ++L +K+ G ++V +NTL+ C++G + A ++
Sbjct: 121 TCNILIKKLCARRRLADAERVLEALKTSGAA-DAVSHNTLVAGYCRDGSLWDAERVLEAA 179
Query: 143 EE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
N VT++ LI YC+ L +AL L+ S PD T VL+ LC +
Sbjct: 180 RASGAANVVTYTALIDGYCRSGRLTDALRLIA---SMPVAPDTYTYNTVLKGLCFAKQWE 236
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A E++ +EM R C PN T+ I ++C+ G+LD A+++
Sbjct: 237 EAEELM-------------------REMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELL 277
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
M G + V Y TL+ G GR+DD LK+L M + YN+ L GL
Sbjct: 278 EQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML-----CRPNTVCYNAALKGLC 332
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ DE E + +M + P S I C + E A +QM + G +P+VV
Sbjct: 333 IAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVV 392
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ +I + ++ +A +L+ M P +FN VL LCR A +L+ +
Sbjct: 393 SYNTIISCFSEQACADDALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAKM 449
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++ ++ LI +LC+ G + A + M PD +T++SL+ S+Q
Sbjct: 450 LK---EDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQ 506
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 164/354 (46%), Gaps = 41/354 (11%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P V+T +++ LC+ R+ DA +LE G V ++
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGAADAV--------------------SH 156
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N L++ YC G L A V + G + N VTY LI G C GR+ D L+++ M
Sbjct: 157 NTLVAGYCRDGSLWDAERVLEAARASGAA-NVVTYTALIDGYCRSGRLTDALRLIASMPV 215
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
+ + YN+VL GL Q +EA E +++M P V + +I FC +G +
Sbjct: 216 APDTYT-----YNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLL 270
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A +QM + G +P+VVIY L++ + + RV +A +L+ M P +N
Sbjct: 271 DRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAA 327
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
L GLC G +L+ E +R + P +S LI +LC+ + A +L QM
Sbjct: 328 LKGLCIAGRWDEVGELIAEMVR---KDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQK 384
Query: 478 KGILPDYLTWNSLLICLSQQTTW-LLLLLLNEM------VSFVMVVHELSAKEK 524
G +PD +++N+++ C S+Q L LLN M +SF V+ L E+
Sbjct: 385 YGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISFNAVLKCLCRAER 438
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 159/332 (47%), Gaps = 36/332 (10%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+++ F T+I L + R+ ++ + + ++ P + +N+I+ ++ A A
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQ----ACAD 408
Query: 68 YRKKMMASGV-QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K++ S + + D ++ ++K LC R D +L+ M N + +N LI SL
Sbjct: 409 DALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSL 468
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+NG+V A + M + P+ VT+S LI + E+ L L +S D+
Sbjct: 469 CQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGF-SEQGLDKVAFDLFRSMPCR--ADI 525
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ L+ LC R DA E++ +M K CLPN T+NIL
Sbjct: 526 FSYNATLKGLCMAARWDDAGELI-------------------ADMVTKDCLPNEVTFNIL 566
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I+S C+ G+++ A++V+ M GI+ + TY+ LI G G +DD LK L M +
Sbjct: 567 INSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCEPD 626
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
IS YNS+L GL R + +A + + +M
Sbjct: 627 T----IS-YNSILKGLCRAERWKDAEKLVTEM 653
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 164/370 (44%), Gaps = 28/370 (7%)
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
E P +T +ILI C L +A +LE + G D V+ ++ C G + DA
Sbjct: 115 EPPAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAE 173
Query: 203 EILEESGEQG---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+LE + G R G++ R + M P+ TYN ++ C
Sbjct: 174 RVLEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLC 230
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ A ++ +M + N VT+ T IR C G +D +++L+ M K G
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQM--PKYGCMPD 288
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ Y++++ G + D+AL+ L M P V + + G C+ G ++ +M
Sbjct: 289 VVIYSTLVNGFSEHGRVDDALKLLSTM-LCRPNTVCYNAALKGLCIAGRWDEVGELIAEM 347
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ + PN + LI++ CQ A E++++M +GY+P ++NT++S Q
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
ALKL+ + P + ++ ++K LC + A+ L+ +M+ + + +T+
Sbjct: 408 DDALKLLNSML------CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTF 461
Query: 488 NSLLICLSQQ 497
N L+ L Q
Sbjct: 462 NILIDSLCQN 471
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/487 (25%), Positives = 215/487 (44%), Gaps = 30/487 (6%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAIL 87
DV +A +++ P +N + V D+ A R+ + ++Y ++
Sbjct: 143 DVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVV 202
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---- 143
+ G+ R GD ++ M R V PN + YNT+I K G + SL M
Sbjct: 203 IAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGL 262
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+PN +T+++L+ C+ + LL++ S VPD T + + + L G +
Sbjct: 263 KPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLS 322
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ +S + G + GKV L+ + G +P YN LI+ YC
Sbjct: 323 LFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYC 382
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+TG L+ A F MK I + +TY+ LI GLC RI + +L M+D+ G
Sbjct: 383 QTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN--GVNPT 440
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ +N+++ R Q ++ L +M++ L P V + FC +G + +A D
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M + +PN +Y+ +I AY + +A L+++M +G P T+N ++ GLC Q
Sbjct: 501 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 560
Query: 426 NVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A EE + + L P + Y+ LI A C +G A L +M GI
Sbjct: 561 QISEA----EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTV 616
Query: 485 LTWNSLL 491
T++ L+
Sbjct: 617 RTYHQLI 623
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 196/420 (46%), Gaps = 32/420 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL RA + + D ++ M P ++ + D L + A
Sbjct: 264 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 323
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + +GV DYT +IL+ GLC +V ++L + + G+ P VIYNTLI+ C+
Sbjct: 324 FGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 383
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A S M+ +P+ +T++ LI CK E + NA LL + G P V T
Sbjct: 384 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 443
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ G++ +L E E G + GK+ L +M
Sbjct: 444 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 503
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K LPN YN +I +Y E G D A + MK +GIS + VTY+ LI+GLC+ +I
Sbjct: 504 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 563
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
+ +I+ + S R+ P YN+++ D+AL+ ++M K ++ R
Sbjct: 564 EAEEIINSL------SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVR 617
Query: 345 SLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G G + + + + +M++ VP+ I++ ++ AY + +A +L KEM
Sbjct: 618 TYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 226/516 (43%), Gaps = 73/516 (14%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + VI G+ RA D V+ D ++ + P+ +N+++D +K DL F
Sbjct: 193 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGG-DLEAGF 251
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
R +M+ G++ + TY +L+ GLC R+G+ LL M S+ + P+ Y+ L
Sbjct: 252 SLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 311
Query: 123 -------------------------------IHSLCKNGKVGRARSLMSDMEE----PND 147
++ LCK+GKV A ++ + P
Sbjct: 312 SRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTR 371
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
V ++ LI YC+ L A + S PD +T ++ LC R+ +A ++L
Sbjct: 372 VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL-- 429
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
EM+ G P V+T+N LI +Y TG L+ V ++M+ +G+
Sbjct: 430 -----------------MEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGL 472
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N V+Y +++ C G+I + + IL M ++ YN+++ D+A
Sbjct: 473 KPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV--YNAIIDAYVEHGPNDQA 530
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+++M+ + P V +L I G C + +A+ + + +P+ V Y+ LI A
Sbjct: 531 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 590
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED---MRGIG 442
C + +A +L + M +G T++ ++SGL G A +L+E + + +
Sbjct: 591 CCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGL------GGAGRLIEMEYLYQKMMQ 644
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+P + ++ +++A + G A L +M+ K
Sbjct: 645 NNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQK 680
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 347 KILGFCVD-GNVEDAKRCFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTG 404
K + CV G++ +A +M +G P N Y+ +I + R +A E+ EMT
Sbjct: 165 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE 224
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
LP T+NT++ G + G++ L ++ + G P + Y+ L+ LC G
Sbjct: 225 RAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQ---MVCHGLKPNAITYNVLLSGLCRAGR 281
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
S LL +M + ++PD T++ L LS+
Sbjct: 282 MGETSALLDEMASQKMVPDGFTYSILFDGLSRN 314
>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 217/448 (48%), Gaps = 34/448 (7%)
Query: 60 DIDLARAFYR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
D+ ++ AF+ + ++ +G + D L+ LC +N++ +++ +M S G+ P++
Sbjct: 75 DMRISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAAS 134
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
Y L++ LCK G VG A L+ ME+ N VT++ L+ C NL +L L++
Sbjct: 135 YTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLM 194
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G VP+ T + +LE +E G V R L E+ KG P
Sbjct: 195 QKGLVPNAFTYSSLLE------------AAYKERG-------VNEAMRLLDEIIAKGGQP 235
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N+ +YN+L++ C+ G ++ A+ +F ++ G S N V+Y+ L+R LC GR ++ ++L
Sbjct: 236 NLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELL 295
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFC 352
M + +E S ++ YN ++ L + ++AL+ + +M P A + I C
Sbjct: 296 AEM-NGRERSPSIVT-YNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLC 353
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+G VE C DQMI PN ++ I C E +V+EA L++ + I
Sbjct: 354 KEGKVEAVVNCLDQMIFGRCSPNEGTFNA-IAVLCYEGKVQEAFSLIQSLGNKQNSSIHD 412
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ V+S LC++GN A L+ E + G P S YS LI+ LC +G A +
Sbjct: 413 YYKGVVSCLCKKGNTYPAFLLLYEMTK---YGFTPDSYTYSSLIRGLCIEGMLYEAMEIF 469
Query: 473 VQMVGKGILPDYLTWNSLLI--CLSQQT 498
+ PD +N+L++ C S +T
Sbjct: 470 KLLEEDHYRPDIDNFNALILGFCKSHRT 497
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 181/389 (46%), Gaps = 25/389 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+KM SG + TY L+KGLC+ + + L + +G+ PN+ Y++L+ + K
Sbjct: 156 EKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKE 215
Query: 130 GKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
V A L+ ++ +PN V++++L+ CKE + A+ L + S GF P+VV+
Sbjct: 216 RGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSY 275
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGR----------------LGKVKGGCRFLKEMER 229
+L LC GR +A E+L E + R GK++ + + EM
Sbjct: 276 NILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMM 335
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
P +YN +I+ C+ G +++ ++ + M S N T++ I LC G++ +
Sbjct: 336 GPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNA-IAVLCYEGKVQE 394
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
++Q + + + S Y V+ L ++ A L +M K P + S
Sbjct: 395 AFSLIQSLGNKQNSSIHDY--YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSL 452
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C++G + +A F + E+ P++ ++ LI +C+ R + E+ + M GY
Sbjct: 453 IRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGY 512
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P +T+ ++ G+ + A +++ E
Sbjct: 513 TPSETTYTILVEGIIHEEEKELAAEVLRE 541
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
RI D L K G K + +LY L + N+ +A+ ++ M + P A
Sbjct: 77 RISDAF--FHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAAS 134
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ + C GNV A + ++M + G N V Y+ L+ C + ++ + + +
Sbjct: 135 YTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLM 194
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G +P A T++++L ++ V A++L++E I +G P Y+ L+ LC++G
Sbjct: 195 QKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEI---IAKGGQPNLVSYNVLLTGLCKEG 251
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ A L + KG P+ +++N LL L + W
Sbjct: 252 RIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRW 288
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 128/346 (36%), Gaps = 91/346 (26%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + +++ + R +N+ ++ D + P+L +N +L L KE I+ A
Sbjct: 200 PNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRL 259
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR----------------- 110
+ K + + G + +Y IL++ LC R + +LL M R
Sbjct: 260 F-KNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLA 318
Query: 111 ------------------GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
KP + YN +I LCK GKV + + M PN+
Sbjct: 319 FHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPNEG 378
Query: 149 TF-SILICAY---------------------------------CKEENLVNALVLLEKSF 174
TF +I + Y CK+ N A +LL +
Sbjct: 379 TFNAIAVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLYEMT 438
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEI---LEESGEQGRLGK----VKGGCR----- 222
+GF PD T + ++ LC G + +A+EI LEE + + + G C+
Sbjct: 439 KYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTD 498
Query: 223 ----FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ M KG P+ TY IL+ + A +V ++ +
Sbjct: 499 LSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHL 544
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 201/415 (48%), Gaps = 30/415 (7%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
+Y L+ GLC ++ + + M+ G P Y L+ +LC++G+ A SL +M
Sbjct: 257 SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM 316
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
EPN T+++LI CKE + AL +L + G P VV ++ C G +
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMM 376
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
DAV G LG ME K PNV TYN LI +C +D A+ +
Sbjct: 377 EDAV---------GVLGL----------MESKKVCPNVRTYNELICGFCRGKSMDRAMAL 417
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
N M +S + VTY+TLI GLC G +D ++ +LM ++G +N+ + L
Sbjct: 418 LNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM--IRDGFSPDQWTFNAFMVCL 475
Query: 319 YRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNV 376
R + EA + L+ +++ +A + + L G+C G +E A F +M+ E +PN
Sbjct: 476 CRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNS 535
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ ++ +I +E +V++A L+++M P T+N ++ + ++ + A +++
Sbjct: 536 ITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILN- 594
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R I G P Y+ IKA C +G + A +++++ +G+L D +N L+
Sbjct: 595 --RLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLI 647
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 200/412 (48%), Gaps = 41/412 (9%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNA 166
V PN + NT+++S CK G + AR ++ P+ T++ L+ YC+ +++ A
Sbjct: 184 SVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERA 243
Query: 167 LVLLEKSFSFGFVP--DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
+ F +P + V+ T ++ LC G++ +A+E F
Sbjct: 244 CGV------FCVMPRRNAVSYTNLIHGLCEAGKLHEALE-------------------FW 278
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M GC P V TY +L+ + CE+G AL +F +M+ G N TY LI LC
Sbjct: 279 ARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKE 338
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAV 342
GR+D+ LK+L E ++G + P+N+++ + ++A+ L ME K+ P
Sbjct: 339 GRMDEALKMLN--EMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVR 396
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I GFC +++ A ++M+E P+VV Y+ LIH C+ V AS L + M
Sbjct: 397 TYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCE 461
G+ P TFN + LCR G VG A +++E + + + H Y+ LI C+
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILE----SLKEKHVKANEHAYTALIDGYCK 512
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVSF 512
G + A+ L +M+ + LP+ +T+N ++ L ++ +LL+ +M F
Sbjct: 513 AGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/526 (25%), Positives = 232/526 (44%), Gaps = 50/526 (9%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ +I GL A +++ ++ + P+++ + ++ L + +L +M
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMR 317
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G + + YTY +L+ LC R+ + K+L+ M +GV P+ V +N LI S CK G +
Sbjct: 318 ERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMME 377
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A ++ ME PN T++ LIC +C+ +++ A+ LL K PDVVT ++
Sbjct: 378 DAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLI 437
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
LC VG V A + G R+G+V + L+ ++ K
Sbjct: 438 HGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVK 497
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
N Y LI YC+ G ++ A +F M + N +T++ +I GL G++ D + +
Sbjct: 498 ANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLL 557
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
++ M +K K + YN ++ + +E D A E L ++ P V + I +
Sbjct: 558 VEDM--AKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAY 615
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G +E+A+ ++ EG + + IY+ LI+AY + A +++ M G G P
Sbjct: 616 CSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSY 675
Query: 412 STFNTVLSGLC-----RQGN----VGTALKLVEEDMRGIGR-----------------GS 445
T++ ++ L ++G+ + +L + D I G
Sbjct: 676 LTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGC 735
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+P YS LI LC+ G A L M GI P + NSLL
Sbjct: 736 VPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLL 781
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 127/495 (25%), Positives = 213/495 (43%), Gaps = 48/495 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
P+ + +I G R + ++ + + + ++P + +N+++ L + + D A
Sbjct: 393 PNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRL 452
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R M+ G D +T+ M LC RVG+ ++L +K + VK N Y LI C
Sbjct: 453 FRL-MIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYC 511
Query: 128 KNGKVGRARSLMSDM--EE--PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A SL M EE PN +TF+++I KE + +A++L+E F P +
Sbjct: 512 KAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLH 571
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++E E+L+E + R ++ L + G PNV TY I
Sbjct: 572 TYNILVE------------EVLKEY-DFDRANEI------LNRLISSGYQPNVVTYTAFI 612
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+YC G L+ A ++ +K +G+ + Y+ LI G +D +L+ M + G
Sbjct: 613 KAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGT--G 670
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAK-- 361
+ Y+ ++ L E + E P +D SL + VD +K
Sbjct: 671 CEPSYLTYSILMKHLVIEKHKKEGSN---------PVGLDVSLTNIS--VDNTDIWSKID 719
Query: 362 -----RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
F++M E G VPN+ Y LI+ C+ R+ A L M G P N+
Sbjct: 720 FGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNS 779
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+LS C+ G G A+ L++ M L Y LI L E+ + A + ++
Sbjct: 780 LLSSCCKLGMFGEAVTLLDSMMECSHLAHLES---YKLLICGLFEQMNKEKAEAVFCSLL 836
Query: 477 GKGILPDYLTWNSLL 491
G D + W L+
Sbjct: 837 RCGYNYDEVAWKVLI 851
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 149/358 (41%), Gaps = 86/358 (24%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F +I GL + + D + + +++F++ P+L +N +++ ++KE D D A
Sbjct: 533 PNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEI 592
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++SG Q + TY +K C R+ + +++ +K+ GV +S IYN LI++
Sbjct: 593 L-NRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEEN-------------LVN----- 165
G + A ++ M EP+ +T+SIL+ E++ L N
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDN 711
Query: 166 -----------ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM--------------- 199
VL EK G VP++ T +K++ LC VGR+
Sbjct: 712 TDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGIS 771
Query: 200 --------------------DAVEILEESGEQGRLGKVKGG----CRFLKEMERKG---- 231
+AV +L+ E L ++ C ++M ++
Sbjct: 772 PSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAV 831
Query: 232 ------CLPNVD--TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
C N D + +LI +TG +D ++ N M+ +G + TY L++ L
Sbjct: 832 FCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQEL 889
>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Glycine max]
Length = 678
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/549 (25%), Positives = 232/549 (42%), Gaps = 102/549 (18%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E + ++ GR + N +S ++P+ +++N+++D LVK + IDLA +
Sbjct: 144 EDLLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALIDALVKSNSIDLAYLKF- 202
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M A D +TY L+ G+C V + +L+ MK +G PN Y LI C
Sbjct: 203 QQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFPNVFTYTMLIEGFCIA 262
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLL---------EKSFSF 176
+V A + M++ PN+ T L+ + + AL LL ++ F
Sbjct: 263 SRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELLSEFLDREQEQERVHF 322
Query: 177 GFVPDVVTI-----TKVLELLCSVGRVM-----------------------------DAV 202
D V + E++ + RV+ D
Sbjct: 323 MLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVF 382
Query: 203 EILEESGEQGRLGKV-------------KGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
EIL + G + +G + G R ++ G + NV +YN++I+ +C
Sbjct: 383 EILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRA 442
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ-LMEDSKEGSKGRI 308
++D+A + F DM++ G+ N VT++TLI G C G ID K+L+ L+E+ G K I
Sbjct: 443 KLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLEN---GLKPDI 499
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
++S++ GL + + +EALE CF +MI
Sbjct: 500 FTFSSIVDGLCQIKRTEEALE---------------------------------CFTEMI 526
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E G PN VIY+ LI + C V + +L++ M G P ++N ++ CR V
Sbjct: 527 EWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVE 586
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A KL + R G P + YS I+AL E G + A + M G PD N
Sbjct: 587 KAKKLFDSMSRS---GLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICN 643
Query: 489 SLLICLSQQ 497
++ L QQ
Sbjct: 644 LIIKILVQQ 652
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 25/259 (9%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
+I RA+++++ +A + + P+L FN++++ K+ ID AR + ++ +
Sbjct: 435 IINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLL-ESLLEN 493
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G++ D +T++ ++ GLC R + + M G+ PN+VIYN LI SLC G V R+
Sbjct: 494 GLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARS 553
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L+ M++ P+ +++ LI +C+ + A L + G PD T + +E
Sbjct: 554 VKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEA 613
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
L E GRL + K + ME GC P+ N++I +
Sbjct: 614 L----------------SESGRLEEAK---KMFYSMEANGCSPDSYICNLIIKILVQQEY 654
Query: 252 LDSALDVFNDMKIDGISWN 270
++ A ++ + GIS N
Sbjct: 655 VEEAQNIIERCRQKGISLN 673
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 8/210 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL--VKEDIDLARA 66
P+ F T+I G + I+ K + + + P + F+SI+D L +K +
Sbjct: 462 PNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALEC 521
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F +M+ G+ + Y IL++ LC V KLL M+ G+ P++ YN LI
Sbjct: 522 F--TEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIF 579
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ KV +A+ L M P++ T+S I A + L A + + G PD
Sbjct: 580 CRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDS 639
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG 212
++++L V +A I+E ++G
Sbjct: 640 YICNLIIKILVQQEYVEEAQNIIERCRQKG 669
>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61400-like [Glycine max]
Length = 498
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 214/474 (45%), Gaps = 37/474 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L+ N++L LVK + + MM+ TY ILM C + K+
Sbjct: 2 PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENL 163
M RG++PN VIY + + G GR R S + PN T+ L+ Y ++
Sbjct: 62 FDEMLERGIEPNVVIYGQMGEA---EGVFGRMRE--SGVVTPNLYTYKTLMDGYSMMGDV 116
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
L G PDVVT ++++L ++G +K
Sbjct: 117 KRVFYLYCDMLKPGLYPDVVTFATLIDVL-------------------RKMGDLKAAXNC 157
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M + +PN YN LI YC+ G L A+ + +M+ GI + VTY+ LI+GLC
Sbjct: 158 FAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCD 217
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
R+++ + +++ M++ + + +N V+ G + ++A+E QM E + P
Sbjct: 218 ICRLEEAMGLMEKMDEVEVFANS--VXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNV 275
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ S+ I GFC GNV A + +M+ +G VP+VV Y LI +C+ +EA L KE
Sbjct: 276 ITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKE 335
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG--------RGSLPGSGHYS 453
M G P T + V+ GL + G A+K+ E G G R P S Y+
Sbjct: 336 MLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEK-TGAGYPGDKMDSRFCSPNSMMYA 394
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLN 507
LI+ LCE G A+ +M G PD L + ++L Q + +++L+
Sbjct: 395 ILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLH 448
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 183/398 (45%), Gaps = 35/398 (8%)
Query: 71 KMMASGVQGDD-YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M SGV + YTY LM G + V F L M G+ P+ V + TLI L K
Sbjct: 89 RMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKM 148
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + A + + M + PN ++ LI YCK +L+ A+ L + G DVVT
Sbjct: 149 GDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTY 208
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
+++ LC + R+ +A+ ++E+ E ++G ++ +M
Sbjct: 209 NILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTE 268
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ PNV T++ILI +C G + +A+ ++ +M I GI + VTY LI G C G +
Sbjct: 269 EXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKE 328
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL----------KQMEKLF- 338
++ + M D+ G + + V+ GL ++ + ++A++ +M+ F
Sbjct: 329 AFRLHKEMLDA--GLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFC 386
Query: 339 -PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P ++ ++ I G C DG + A + F +M G P++++Y ++ A+ Q + + +
Sbjct: 387 SPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMM 446
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
L +M G + + + G G + +AL E
Sbjct: 447 LHADMVKMGVIQNTFIYRVLSRGYRENGYLKSALMCSE 484
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 136/302 (45%), Gaps = 30/302 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I L + + +++F++ P+ +NS++ K L +
Sbjct: 133 PDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWL 192
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R +M G+ D TY IL+KGLC R+ + L+ M V NSV +N +I CK
Sbjct: 193 RLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCK 252
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A + S M EPN +TFSILI +C + N+ A+ L + G VPDVVT
Sbjct: 253 IGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVT 312
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE-- 226
T +++ C VG +A + +E + G + G+ + E
Sbjct: 313 YTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKT 372
Query: 227 --------MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M+ + C PN Y ILI CE G + A F +MK +G + + Y T++
Sbjct: 373 GAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTML 432
Query: 279 RG 280
+
Sbjct: 433 QA 434
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/494 (27%), Positives = 231/494 (46%), Gaps = 32/494 (6%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQG 79
L RAR DV++ + L S M + IL L+K LAR + +M+
Sbjct: 138 LRRARDAADVLRLS-LSSGIAMKQYTA--SQILFALIKIRQFALARDLF-DEMVQCKFPL 193
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D+Y Y ++ C + LL M+S+GVK ++V YN L++ LC+N +V A +
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+ M E ++VT+ L+ +C+ E L AL + + S FVP V + + +++ L
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313
Query: 196 GRVMDAVEILEESGEQGRLG----------------KVKGGCRFLKEMERKGCLPNVDTY 239
G + A + GE G + + + R + M +G PN TY
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
ILI S C+ G++D AL +F+ M+ GI Y++LI G C +L M
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEM-- 431
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
++G + Y+ ++ GL R+ A+E ++M + + + I GFC DGN+
Sbjct: 432 VEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNM 491
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++A R FD+MI+ VPN V ++ +I YC+ VR+A +L +M G P T+ ++
Sbjct: 492 DEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSL 551
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+S LC A + V +D+ + S + L+ C++G + +M
Sbjct: 552 ISVLCLTLGAMKAKEFV-DDLE--NNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRA 608
Query: 478 KGILPDYLTWNSLL 491
+G+ D +++ ++
Sbjct: 609 RGVKLDLISFTVIV 622
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/532 (23%), Positives = 233/532 (43%), Gaps = 63/532 (11%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
++ GL + I+ + + M P+L N+++D L K+ A +R M
Sbjct: 306 MVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRG-MANR 364
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G++ ++ TYAIL+ LC + D + M+ +G++ YN+LI+ C++ +A
Sbjct: 365 GLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQA 424
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R L+++M E P+ ++S LI C++ +L +A+ L + G +V T T ++
Sbjct: 425 RGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISG 484
Query: 192 LCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPN 235
C G + +A + ++ + R+G V+ + +M +G P+
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TY LIS C T A + +D++ + + N + TL+ G C GR+ + I
Sbjct: 545 NYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWD 604
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
M G K + + ++Y + + ++ ++M++ + P V + I
Sbjct: 605 EMR--ARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSK 662
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA-- 411
+ N+ A C+D+MI +G PNVV Y LI+ C+ + A L +EM +LP +
Sbjct: 663 EENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFT 722
Query: 412 --------------------------------STFNTVLSGLCRQGNVGTALKLVEEDMR 439
TFNT++ G C+ G + A+ L++ +
Sbjct: 723 YNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTE 782
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P YS +I LC+ G A L +M+ KG+ PD + +N L+
Sbjct: 783 S---GFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 216/495 (43%), Gaps = 32/495 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE + T++ G R + ++ TD + + PS+ + ++D L K + +AF
Sbjct: 264 DEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRG-HIDKAFRL 322
Query: 70 KKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ G+ + + L+ LC R + +L M +RG++PN V Y LIHSLCK
Sbjct: 323 ACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCK 382
Query: 129 NGKVGRARSLMSDMEEPN-DVT---FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A + M E VT ++ LI YC+ +N A LL + G P +
Sbjct: 383 RGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAAS 442
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LC G + A+E+ +EM R G NV T+ LIS
Sbjct: 443 YSPLIAGLCRKGDLASAMELH-------------------REMARNGVSGNVYTFTTLIS 483
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ G +D A +F+ M + N VT++ +I G C G + ++ M D G
Sbjct: 484 GFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVD--RGL 541
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
Y S++ L +A E++ +E + + + + GFC +G + +
Sbjct: 542 TPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYH 601
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+D+M G +++ + +++A + + S L +EM G P ++
Sbjct: 602 IWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHS 661
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
++ N+ AL + + I G P Y+ LI LC+ G SA +L +M+ LP
Sbjct: 662 KEENIVQALNCWD---KMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLP 718
Query: 483 DYLTWNSLLICLSQQ 497
+ T+N L L+ +
Sbjct: 719 NSFTYNCFLDFLANE 733
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 142/630 (22%), Positives = 251/630 (39%), Gaps = 120/630 (19%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLA 64
P DE ++ IR R ++ A L++R + S +N ++ L + + L
Sbjct: 192 PLDEYVYTAGIRAYCEIRNLDG---ARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLE 248
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTN----------------------------- 95
+ M+ G+ D+ TY L+ G C T
Sbjct: 249 AVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVD 308
Query: 96 ------RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EP 145
+ F+L + G+ PN N LI LCK+ + A L M EP
Sbjct: 309 GLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEP 368
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N+VT++ILI + CK + +AL + ++ G V ++ C A +L
Sbjct: 369 NEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLL 428
Query: 206 EESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
E E+G R G + +EM R G NV T+ LIS +C+
Sbjct: 429 NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKD 488
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G +D A +F+ M + N VT++ +I G C G + ++ M D G
Sbjct: 489 GNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVD--RGLTPDNY 546
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
Y S++ L +A E++ +E + + + + GFC +G + + +D+M
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606
Query: 368 ----------------------------------IEEGGV-PNVVIYDCLIHAYCQEERV 392
++E GV P+ V + C+I + +EE +
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A +M G P T+ +++ LC+ G + +A L EE + +GR LP S Y
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEML--VGR-FLPNSFTY 723
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLN--- 507
+ + L +G + A +L ++ +G L + +T+N+L+ C + Q + L+ N
Sbjct: 724 NCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTE 782
Query: 508 -----EMVSFVMVVHELSAKEKRCKLRSLN 532
+ +S+ +++EL CK+ +N
Sbjct: 783 SGFFPDCISYSTIINEL------CKVGDIN 806
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/524 (23%), Positives = 215/524 (41%), Gaps = 96/524 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+E + +I L + M++D + D + + ++ +NS+++ + D AR
Sbjct: 368 PNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGL 427
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G+ +Y+ L+ GLC + +L M GV N + TLI C
Sbjct: 428 L-NEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFC 486
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G + A L M + PN+VTF+++I YC+ N+ A L ++ G PD
Sbjct: 487 KDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNY 546
Query: 184 TITKVLELLCSVGRVMDAVEILEE-------------------SGEQGRLG--------- 215
T ++ +LC M A E +++ ++GRL
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEM 606
Query: 216 --------------------KVKGGCR---FLKEMERKGCLPNVDTYNILISSYCETGVL 252
K+ G + +EM+ KG P+ + +I + + +
Sbjct: 607 RARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENI 666
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
AL+ ++ M DG S N VTY LI LC G + +IL +E GR P N
Sbjct: 667 VQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSA-QIL-----CEEMLVGRFLP-N 719
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
S Y + L++L +G +E AK I EG
Sbjct: 720 SFTYNCF--------LDFLAN--------------------EGELEKAK-VLHATILEGC 750
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+ N V ++ LI +C+ +++ A +LM+ T G+ P +++T+++ LC+ G++ A +
Sbjct: 751 LANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQ 810
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
L E + +G P Y+ LI+ G F + MV
Sbjct: 811 LWNEMLY---KGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMV 851
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 146/358 (40%), Gaps = 60/358 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E F +I G R + + D + +TP + S++ VL + +
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEF 567
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + V + ++ LM G C R+ + + + M++RGVK + + + ++++ K
Sbjct: 568 VDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALK 627
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ L +M+E P++V + +I + KEEN+V AL +K + G P+VVT
Sbjct: 628 LHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVT 687
Query: 185 ITKVLELLCSVGRVMDAVEILEES-------------------GEQGRL----------- 214
T ++ LC G + A + EE +G L
Sbjct: 688 YTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL 747
Query: 215 --------------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G+++G ++ G P+ +Y+ +I+ C+ G ++
Sbjct: 748 EGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINK 807
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI------LQLMEDSKEGSKG 306
A ++N+M G+ + V Y+ LIR G D GL I L+ +D+ KG
Sbjct: 808 AFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMVNLKYADDTPVNHKG 865
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 208/457 (45%), Gaps = 28/457 (6%)
Query: 59 EDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
++ID+ +A ++M +G TY + GLC V +L+ ++ R NS
Sbjct: 265 KNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSY 324
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
YN +IH C+NG++ A L+ DM P ++SILI CK+ + AL L+E+
Sbjct: 325 CYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEM 384
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV---------------- 217
P +VT + + + LC G ++ + G +G V
Sbjct: 385 VQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDM 444
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
C+ + EM G +PN T+N LI +C+ LD AL+VF M G+ N T + +
Sbjct: 445 GSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIM 504
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
G + LK++ ++D G YN V+ L +E + ++A E L M K
Sbjct: 505 ADEFNREGHFWEALKLINEVQDL--GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKN 562
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+FP A+ + I G+ N A + +M++ G P++V Y LI+ + +++EA
Sbjct: 563 NVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEA 622
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
L KEM G +P F +++G C+ G++ +A L EE M G+ P Y+ L
Sbjct: 623 YYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEE-MSQWGKS--PNVVTYTCL 679
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
I + A L +M + PD LT+ +L+
Sbjct: 680 IDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIF 716
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 204/457 (44%), Gaps = 39/457 (8%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
+L+K N + D + + G++ N + N L++ + + RSL ++++
Sbjct: 183 VLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDS 242
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN T++I++ YCK SFG D+V T+VLE + G
Sbjct: 243 GPSPNVFTYTIMMNYYCKG--------------SFGKNIDIVKATEVLEEMEMNGESPTV 288
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
V R G V+ R ++++ + N YN +I +C G L A ++ D
Sbjct: 289 VTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLED 348
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M+ GIS +Y LI GLC G+++ L +++ M S K + Y+S+ GL +
Sbjct: 349 MRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQS--NVKPSLVTYSSLFDGLCKS 406
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ +L + E + + I GF + ++ A + +M G VPN +
Sbjct: 407 GLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTF 466
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--D 437
+ LIH +C+ +R+ +A E+ M G T N + R+G+ ALKL+ E D
Sbjct: 467 NRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQD 526
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ G +P S Y+ +IK LC++ + A +L M+ + P + +N+L+ ++Q
Sbjct: 527 L-----GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQ 581
Query: 498 TTWLLLLLL----------NEMVSFVMVVHELSAKEK 524
+ LLL +V++ M+++ S + K
Sbjct: 582 SNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSK 618
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 162/380 (42%), Gaps = 29/380 (7%)
Query: 29 DVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
V KA DL+ N+ PSL ++S+ D L K + + A G + D +Y
Sbjct: 373 QVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYN 432
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM--- 142
L+ G L +G KL+H M+ G PNS +N LIH CK ++ +A + + M
Sbjct: 433 TLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKV 492
Query: 143 -EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+ N T +I+ + +E + AL L+ + G VP+ T V++ LC + A
Sbjct: 493 GVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKA 552
Query: 202 VEILEE-----------------SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
E+L G + K + K M + G P++ TY +LI+
Sbjct: 553 WEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAK-MLKVGIPPSIVTYTMLIN 611
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ + A +F +M G+ + + + +I G C G + + + M S+ G
Sbjct: 612 MFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEM--SQWGK 669
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y ++ G ++ + D+A +M++ + P + + I G+ G + +
Sbjct: 670 SPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVRE 729
Query: 363 CFDQMIEEGGVPNVVIYDCL 382
F++M E G PN Y L
Sbjct: 730 MFNEMKENGVFPNYTAYATL 749
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 23/306 (7%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N+LI + E +L A DVF + G+ N ++ + L+ + + + + ++D
Sbjct: 182 NVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKD 241
Query: 300 SKEGSKGRISPY----NSVLYGLYREN----QQDEALEYLKQMEKLFPRAVDRSLKILGF 351
S G + Y N G + +N + E LE + +M P V I G
Sbjct: 242 S--GPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEM-EMNGESPTVVTYGAYIHGL 298
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G VE A R + N Y+ +IH +C+ + EA EL+++M HG P A
Sbjct: 299 CRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTA 358
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+++ ++ GLC++G V AL L+EE ++ + SL YS L LC+ G + + +
Sbjct: 359 YSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVT---YSSLFDGLCKSGLTEISLSM 415
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSL 531
+ +G D +++N+L+ +L +M S +VHE+ +
Sbjct: 416 FHNLGAEGYKHDVISYNTLING---------FVLQRDMGSACKLVHEMRMNGSVPNSFTF 466
Query: 532 NHLAHG 537
N L HG
Sbjct: 467 NRLIHG 472
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 91/208 (43%), Gaps = 4/208 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + VI+ L + + + ++ + N+ P +N+++D K+
Sbjct: 531 PNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLL 590
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ G+ TY +L+ +++ + + L M +G+ P+ +I+ +I CK
Sbjct: 591 YAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCK 650
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A +L +M + PN VT++ LI Y K + + A L K PD +T
Sbjct: 651 VGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLT 710
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG 212
T ++ S+G E+ E E G
Sbjct: 711 YTALIFGYQSLGYSDRVREMFNEMKENG 738
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 181/384 (47%), Gaps = 60/384 (15%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND-VTFSILICAYCKEENLVNALVLLEKS 173
N YN L+ LC G+V AR L +M P D VT+ ILI YC L NA+ LL+
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGELENAVKLLDDM 320
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ G P+ T V+ LLC GRV DA+ ++E +M +
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVE-------------------DMVHHKVI 361
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
+ Y ++S +C G L SA F++M+ G++ + VTY TLI GLC G + + K+
Sbjct: 362 LDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKV 421
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV 353
LQ M L R DE V ++ + G+C
Sbjct: 422 LQEM--------------------LARRLDVDE---------------VTYTVLVDGYCK 446
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A + + M++ G PNVV Y L C++ V+ A+EL+ EM+ G A T
Sbjct: 447 RGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACT 506
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+N++++GLC+ G + A++ + DM G P Y+ LI ALC+ G A LL
Sbjct: 507 YNSLINGLCKAGYLDQAMRTM-ADMDAAGLK--PDVYTYTTLIDALCKSGELDRAHDLLQ 563
Query: 474 QMVGKGILPDYLTWNSLL--ICLS 495
+M+ GI P +T+N L+ C+S
Sbjct: 564 EMLDNGIKPTIVTYNVLMNGFCMS 587
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 219/461 (47%), Gaps = 37/461 (8%)
Query: 49 FNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+N +L VL ++ AR + + MAS D TY IL+ G C + + KLL M
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDE--MAS--PPDVVTYGILIHGYCALGELENAVKLLDDM 320
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENL 163
+RGV+PN+ +Y +++ LC G+V A +++ DM ++ ++ ++ +C + +L
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
V+A ++ G D VT T ++ LC G + +A ++L+E
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEM--------------- 425
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ R+ + V TY +L+ YC+ G + A V N M G++ N VTY L GLC
Sbjct: 426 ---LARRLDVDEV-TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCK 481
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
G + ++L M S +G + YNS++ GL + D+A+ + M+ L P
Sbjct: 482 QGDVQAANELLHEM--SNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDV 539
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I C G ++ A +M++ G P +V Y+ L++ +C RV +L++
Sbjct: 540 YTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEW 599
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALC 460
M P A+T+N+++ C +G +K E +G+ R P Y+ LIK C
Sbjct: 600 MLEKNIHPNATTYNSLMKQYC----IGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHC 655
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
+ + A +M+ KG ++++L+ L+++ ++
Sbjct: 656 KARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFV 696
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 204/454 (44%), Gaps = 24/454 (5%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+ SPPD + +I G + + VK D + + P+ ++ S++ +L +
Sbjct: 288 MASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSD 347
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ M+ V D+ Y ++ G C + + M+ +G+ + V Y TLI+
Sbjct: 348 ALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLIN 407
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC+ G++ A ++ +M + ++VT+++L+ YCK + A + G P
Sbjct: 408 GLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAP 467
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+VVT T + + LC G V A E+L E +G + G + R +
Sbjct: 468 NVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTM 527
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M+ G P+V TY LI + C++G LD A D+ +M +GI VTY+ L+ G C
Sbjct: 528 ADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMS 587
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
GR++ G K+L+ M + + + YNS++ N E K M + P
Sbjct: 588 GRVEGGKKLLEWMLE--KNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNEN 645
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ I G C ++++A+ ++MIE+G Y LI ++++ EA +L +M
Sbjct: 646 TYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDM 705
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
G+ +N + + N+ L L +E
Sbjct: 706 RKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDE 739
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 49/269 (18%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+ + + G P+ + N ++S LD A+++F + N +Y+ L++ LC
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLP----DKNVCSYNILLKVLC 273
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
GR++D ++ M SP + V YG+
Sbjct: 274 GAGRVEDARQLFDEM----------ASPPDVVTYGIL----------------------- 300
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
I G+C G +E+A + D M+ G PN +Y ++ C + RV +A ++++M
Sbjct: 301 -----IHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM 355
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
H + + + TVLSG C +G++ +A + +E R +G Y+ LI LC
Sbjct: 356 VHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQR---KGLATDGVTYTTLINGLCRA 412
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + A +L +M+ + + D +T+ L+
Sbjct: 413 GELKEAEKVLQEMLARRLDVDEVTYTVLV 441
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 222/477 (46%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ D L+KG C R +
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 165
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ Y+ L+ SLC GK G+A L+ M E P+ V ++ +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTV 225
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQG 212
I + KE ++ A L ++ G PD VT + V+ LC R MD E L + +G
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCK-ARAMDKAEAFLRQMVNKG 284
Query: 213 RL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
L G+ K R KEM R+ LP+V T+N+L+ S C+ G + A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + + +Y+ ++ G + G + D + LM +G I +N ++
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM--LGDGIAPVICTFNVLIK 402
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D+A+ +M + P + + I C G ++DA F+QMI++G P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ Y CLI +C + +A EL+ E+ +G F+++++ LC+ G V A +
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + G P + YS L+ C G + A + MV GI P+ + + +L+
Sbjct: 523 D---LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 136/500 (27%), Positives = 228/500 (45%), Gaps = 42/500 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
PD + TVI G + DV KA DL + P ++S++ L K +D A
Sbjct: 217 PDVVAYNTVIDGFFKE---GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKA 273
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF R+ M+ GV +++TY L+ G T + + ++ M+ + + P+ V +N L+
Sbjct: 274 EAFLRQ-MVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMG 332
Query: 125 SLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLCK GK+ AR + M + P+ +++I++ Y + LV+ L + G P
Sbjct: 333 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAP 392
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ T +++ + G + A+ I EM G PNV TY
Sbjct: 393 VICTFNVLIKAYANCGMLDKAMIIF-------------------NEMRDHGVKPNVLTYT 433
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-ED 299
+I++ C G +D A++ FN M G++ + Y LI+G C+ G + LK +L+ E
Sbjct: 434 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL---LKAKELISEI 490
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEY--LKQMEKLFPRAVDRSLKILGFCVDGNV 357
G I ++S++ L + + +A L L P AV S+ + G+C+ G +
Sbjct: 491 MNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKM 550
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A R FD M+ G PN V+Y L++ YC+ R+ E L +EM G P +N +
Sbjct: 551 EKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 418 LSGLCRQG-NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ GL G V +K E GI YS +++ L + F A L ++
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCT----YSIVLRGLFKNRCFDEAIFLFKELR 666
Query: 477 GKGILPDYLTWNSLLICLSQ 496
+ D +T N+++ + Q
Sbjct: 667 AMNVKIDIITLNTMIAGMFQ 686
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 195/460 (42%), Gaps = 65/460 (14%)
Query: 63 LARAFYRKKMMASGVQGD------DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
LA A + + AS QG +TYAILM +R + G++ +
Sbjct: 89 LAVALFNRA--ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDI 146
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I N L+ C+ + A +LL ++
Sbjct: 147 IIANHLLKGFCEAKRTDEALD------------------------------ILLHRTPEL 176
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV + + +L+ LC G+ A ++L E G + C P+V
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-----------------CSPDV 219
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN +I + + G ++ A D+F +M GI +FVTY +++ LC +D L+
Sbjct: 220 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQ 279
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M + +G YN+++YG Q EA+ K+M + + P V ++ + C
Sbjct: 280 MVN--KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKY 337
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +++A+ FD M +G P+V Y+ +++ Y + + + ++L M G G P+ TF
Sbjct: 338 GKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTF 397
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G + A+ + E MR G P Y+ +I ALC G A Q
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNE-MR--DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQ 454
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVM 514
M+ +G+ PD ++ L+ + LL E++S +M
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGS---LLKAKELISEIM 491
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 130/284 (45%), Gaps = 27/284 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARAF 67
D +F ++I L + + D DL + P+ +++ ++D LV + R F
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+++G++ +D Y L+ G C R+ +G L M +G+KP++++YN +I L
Sbjct: 558 --DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 615
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+ A+ +M E N T+SI++ K A+ L ++ + D++
Sbjct: 616 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 675
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T+ ++ + RV +A ++ + R G +P V TY+I+I
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLF-------------------ASISRSGLVPCVVTYSIMI 716
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
++ + G+++ A D+F+ M+ G + + ++R L I
Sbjct: 717 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 140/331 (42%), Gaps = 25/331 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + TVI L R ++D ++ + + + P ++ ++ L
Sbjct: 427 PNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M +G+ D ++ ++ LC RV D + + + G+ P +V+Y+ L+ C
Sbjct: 487 ISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ +A + M EPNDV + L+ YCK + L L + G P +
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ L GR + A KVK EM G N TY+I++
Sbjct: 607 YNIIIDGLFEAGRTVPA--------------KVK-----FHEMTESGIAMNKCTYSIVLR 647
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ D A+ +F +++ + + +T +T+I G+ R+++ + + S+ G
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI--SRSGL 705
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+ Y+ ++ L +E +EA + M+
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 4/207 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P++ ++ T++ G + I++ + + + + PS ++N I+D L + +
Sbjct: 567 PNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 626
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M SG+ + TY+I+++GL + L +++ VK + + NT+I + +
Sbjct: 627 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 686
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+V A+ L + + P VT+SI+I KE + A + + G PD
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ 211
+ V+ L ++ A L + E+
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDER 773
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/481 (26%), Positives = 224/481 (46%), Gaps = 32/481 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ +I+GL + I+D D + + PS+ +N+++D K + A K +
Sbjct: 286 MYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSG-RMKDALGIKAL 344
Query: 73 M-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G DD+TY L+ GLC ++ + +LL+ +RG P + + LI+ CK +
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAER 403
Query: 132 VGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + S+M N D+ + +LI K+ L A L + F+ G P+VV T
Sbjct: 404 IDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTS 463
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ C VG V A+E+ K ME +GC PN TY LI
Sbjct: 464 IIDGYCKVGMVGAALEVF-------------------KLMEHEGCHPNAWTYGSLIYGLI 504
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ L A+ + M+ DGI+ + Y TLI+G C D+ ++ ++ME K G
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMME--KNGLTPD 562
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN + L + + +EA +L + + + SL + GF GN + A ++M
Sbjct: 563 EQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSL-VDGFSKAGNTDFAAVLIEKM 621
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ EG ++ Y L+ A C+++++ EA ++ +MT G + ++S + ++G
Sbjct: 622 VNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKH 681
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A L E I G P + Y+ I + C+ G + A L+ +M G+ PD +T+
Sbjct: 682 DHAKSLFNE---MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTY 738
Query: 488 N 488
+
Sbjct: 739 H 739
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/524 (21%), Positives = 220/524 (41%), Gaps = 40/524 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G +A I+D ++ + N L+ + +++VL+K+
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M A+G+ + Y ++ G C VG ++ +M+ G PN+ Y +LI+ L +
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K+ +A +L++ M+E P + ++ LI CK+ NA L E G PD
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQA 565
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ-------------GRLGKVKGGCRFLKEMERKG 231
+ + LC GR +A L G + G +++M +G
Sbjct: 566 YNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C ++ TY++L+ + C+ L+ AL + + M + G+ N V Y +I + G+ D
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
+ M S G K + Y + + Q +EA + +ME+ + P V + I
Sbjct: 686 SLFNEMISS--GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN 743
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE----------------RVR 393
G G ++ A +M++ PN Y L+ + + +
Sbjct: 744 GCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELN 803
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
+L++ M HG P T++++++G C+ + A L++ +G+ P Y+
Sbjct: 804 TVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDH---MLGKAISPNEEIYT 860
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LIK C+ F + M+ G P +++ L++ L +
Sbjct: 861 MLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDE 904
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 213/500 (42%), Gaps = 41/500 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ I+ ++I G + M+ ++ L+ P+ + S++ L+ +D L +A
Sbjct: 456 PNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI-QDKKLHKAMA 514
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM G+ Y L++G C + + F+L +M+ G+ P+ YN L +LC
Sbjct: 515 LITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALC 574
Query: 128 KNGKVGRARS-LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+G+ A S L+ VT++ L+ + K N A VL+EK + G D+ T +
Sbjct: 575 KSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYS 634
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+L+ LC ++ +A+ IL++ G + GK EM
Sbjct: 635 VLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISS 694
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TY + ISSYC+ G ++ A + +M+ DG++ + VTY I G G +D
Sbjct: 695 GHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRA 754
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
L+ M D+ P N Y L L++ +M + +D S G
Sbjct: 755 FSTLKRMVDAS------CEP-NCWTYWLL--------LKHFLKMSLINAHYIDTS----G 795
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+ + ++M++ G P VV Y +I +C+ R+ EA L+ M G P
Sbjct: 796 MWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPN 855
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+ ++ C G + V DM I G P Y LI LC++G + A
Sbjct: 856 EEIYTMLIKCCCDIKLFGKDVSFV-TDM--IEFGFQPQLESYHYLIVGLCDEGDYDRAKS 912
Query: 471 LLVQMVGKGILPDYLTWNSL 490
L ++G + + W L
Sbjct: 913 LFCDLLGMDYNHNEVAWKIL 932
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 221/502 (44%), Gaps = 35/502 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
+R L R M + K + + + P +N+++ K+ Y + SG
Sbjct: 150 ALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESG 209
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+Q D YT L+ G C T+ + LL +M G + N Y LI L + V A
Sbjct: 210 MQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREAL 269
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L+ M + N +++LI CKE + +A LL++ G VP V T +++
Sbjct: 270 VLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGY 329
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C GR+ DA+ G + L ME+ GC P+ TYN LI C G L
Sbjct: 330 CKSGRMKDAL-----------------GIKAL--MEQNGCNPDDWTYNSLIYGLC-GGKL 369
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A ++ N G + +T+ LI G C RIDD L++ M S K + Y
Sbjct: 370 DEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSN--CKLDLQAYG 427
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ L ++ + EA E L +M L P V + I G+C G V A F M E
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHE 487
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PN Y LI+ Q++++ +A L+ +M G P + T++ G C++ A
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNA 547
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L E + G P Y+ L ALC+ G + A LV+ KG++ +T+ SL
Sbjct: 548 FRLFEMMEKN---GLTPDEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTYTSL 601
Query: 491 LICLSQQ-TTWLLLLLLNEMVS 511
+ S+ T +L+ +MV+
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVN 623
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 151/633 (23%), Positives = 257/633 (40%), Gaps = 111/633 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD+ + ++I GL ++ ++R TP++ F ++++ K E ID A
Sbjct: 352 PDDWTYNSLIYGLCGGKLDEAEELLNGAIAR-GFTPTVITFTNLINGYCKAERIDDALRV 410
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M++S + D Y +L+ L R+ + + L+ M + G+ PN VIY ++I C
Sbjct: 411 -KSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYC 469
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G VG A + ME PN T+ LI +++ L A+ L+ K G P V+
Sbjct: 470 KVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVI 529
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C +A R + ME+ G P+ YN+L
Sbjct: 530 AYTTLIQGQCKKHEFDNAF-------------------RLFEMMEKNGLTPDEQAYNVLT 570
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C++G A + ++ + G+ VTY +L+ G G D +++ M + EG
Sbjct: 571 DALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVN--EG 625
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
K + Y+ +L L ++ + +EAL L QM + V ++ I +G + AK
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F++MI G P+ Y I +YC+ ++ EA L+ EM G P T++ ++G
Sbjct: 686 SLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGC 745
Query: 422 CRQG---------------------------------------------------NVGTA 430
G + T
Sbjct: 746 GHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTV 805
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+E M+ G P YS +I C+ + A +LL M+GK I P+ + L
Sbjct: 806 WQLLERMMK---HGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTML 862
Query: 491 LICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG---------AGSV 541
+ C + L + VSFV + E + +L S ++L G A S+
Sbjct: 863 IKCCCD------IKLFGKDVSFVTDMIEFGFQP---QLESYHYLIVGLCDEGDYDRAKSL 913
Query: 542 WLGLRIHDTTHTFII-----DRRVEIGHV-FCS 568
+ L D H + D ++ GHV FCS
Sbjct: 914 FCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCS 946
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 14/258 (5%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN+ + S + + +++ + +G+ + VTY+T+I C G + + L+
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGN 356
+S G + N++L G R + +A L M + R + S IL G
Sbjct: 207 ES--GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARC 264
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V +A M+++G N+ +Y LI C+E R+ +A L+ EM G +P T+N
Sbjct: 265 VREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNA 324
Query: 417 VLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ G C+ G + AL L+E++ G P Y+ LI LC G A LL
Sbjct: 325 MIDGYCKSGRMKDALGIKALMEQN------GCNPDDWTYNSLIYGLC-GGKLDEAEELLN 377
Query: 474 QMVGKGILPDYLTWNSLL 491
+ +G P +T+ +L+
Sbjct: 378 GAIARGFTPTVITFTNLI 395
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 205/414 (49%), Gaps = 27/414 (6%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
V + SL N +L LVK + + K+M+ +Q + T+ I + GLC +
Sbjct: 156 VQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGK 215
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG---RARSLMSDMEE----PNDVT 149
+ ++ +K+ G PN V YNTLI CK G G RA +++ +M PN++T
Sbjct: 216 LNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEIT 275
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ LI +CK+EN++ A E+ G P++VT ++ L + G++ +A+ + ++
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G + +K + ++ + +PN T+N +I ++C+ G+++
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
+ N M +GI N TY+ LI GLC + K+L ME+ + K + YN
Sbjct: 396 EGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE--LKADVVTYNI 453
Query: 314 VLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G ++ + +A + L +M + P V + + G+C++GN++ A + QM +EG
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
NVV Y+ LI +C+ ++ +A+ L+ EM G P +T++ V + +G
Sbjct: 514 KRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 195/411 (47%), Gaps = 33/411 (8%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME--- 143
L+ L N G+ + M R ++PN +N I+ LCK GK+ +A ++ D++
Sbjct: 171 LLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWG 230
Query: 144 -EPNDVTFSILICAYCKEEN---LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
PN VT++ LI +CK+ + + A +L++ + P+ +T +++ C V+
Sbjct: 231 FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVL 290
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A EE M+R+G PN+ TYN LI+ G LD A+ ++
Sbjct: 291 AAKNAFEE-------------------MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ N VT++ LI G C I + K+ + +++ +N+++
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFD--DIAEQDLVPNAITFNTMIDAFC 389
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +E M E +FP + I G C + NV AK+ ++M +VV
Sbjct: 390 KAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVV 449
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ LI +C++ +A +L+ EM G P T+NT++ G C +GN+ ALK V
Sbjct: 450 TYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALK-VRTQ 508
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
M G+ + Y+ LIK C+ G + A+ LL +M+ KG+ P+ T++
Sbjct: 509 MEKEGKRA--NVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYD 557
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 185/418 (44%), Gaps = 70/418 (16%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLE 171
VK +++ HSL G A +L++DM L+ AY + +A +
Sbjct: 105 VKNEKHTVSSVFHSLLLGGDRPCANALITDM----------LVLAYVTNLEIHSACEVFR 154
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
+ +GF + + +L L + E G + V KEM ++
Sbjct: 155 RVQDYGFKLSLNSCNPLLSALV-------------KGNETGEMQYV------YKEMIKRR 195
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC---SGGRID 288
PN+ T+NI I+ C+ G L+ A DV D+K G S N VTY+TLI G C S G++
Sbjct: 196 IQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMY 255
Query: 289 DGLKILQLM---------------------------------EDSKEGSKGRISPYNSVL 315
IL+ M E ++G K I YNS++
Sbjct: 256 RADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLI 315
Query: 316 YGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL + DEA+ +M L P V + I GFC +++A++ FD + E+ V
Sbjct: 316 NGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLV 375
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN + ++ +I A+C+ + E L M G P ST+N +++GLCR NV A KL
Sbjct: 376 PNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKL 435
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ E + + Y+ LI C+ G A LL +M+ G+ P+++T+N+L+
Sbjct: 436 LNEMENYELKADVVT---YNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 22/302 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+E F T+I G + + A + + R + P++ +NS+++ L +D A A
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KM+ G++ + T+ L+ G C + + KL + + + PN++ +NT+I + C
Sbjct: 331 W-DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFC 389
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +L + M + PN T++ LI C+ +N+ A LL + ++ DVV
Sbjct: 390 KAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVV 449
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C G A ++L E G G +K + +M
Sbjct: 450 TYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQM 509
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E++G NV TYN+LI +C+TG L+ A + N+M G++ N TYD + + G I
Sbjct: 510 EKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFI 569
Query: 288 DD 289
D
Sbjct: 570 PD 571
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 6/242 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +I G + +MI + K D ++ ++ P+ FN+++D K +
Sbjct: 341 PNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFAL 400
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ G+ + TY L+ GLC V KLL+ M++ +K + V YN LI CK
Sbjct: 401 HNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCK 460
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G+ +A L+ +M +PN VT++ L+ YC E NL AL + + G +VVT
Sbjct: 461 DGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVT 520
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK-EMERKGCLPNVDTYNILI 243
+++ C G++ DA +L E E+G L + ++ EM KG +P+++ + I
Sbjct: 521 YNVLIKGFCKTGKLEDANRLLNEMLEKG-LNPNRTTYDVVRLEMLEKGFIPDIEGHLYNI 579
Query: 244 SS 245
SS
Sbjct: 580 SS 581
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 217/454 (47%), Gaps = 35/454 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKK 71
+F ++ + +D ++ LV + N+ + D L+K ++ A AFY ++
Sbjct: 157 VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY-EE 215
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ G D + +LM LC +++ + L + RG++P V +NTLI+ CK+G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 132 VGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ + R +M + P+ T+S+LI CKE L +A L + G VP+ VT T
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR +EI + +M RKG P+V TYN LI+ C
Sbjct: 336 LINGHCVTGRADLGMEIYQ-------------------QMLRKGVKPDVITYNTLINGLC 376
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G L A + +M G+ + TY LI G C G ++ L+I + M KEG +
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM--VKEGIELD 434
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ +++ G RE Q EA L++M + + P ++ I GFC G+V+ +
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M +G VP VV Y+ L++ C++ +++ A+ L+ M G +P T+N +L G C+ G
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
N KL E +G + G Y+ LI L
Sbjct: 555 NREDFDKLQSE------KGLVQDYGSYTSLIGDL 582
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 195/387 (50%), Gaps = 33/387 (8%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA 166
G P+ +N L+H LCK K+ A+ L ++ + P V+F+ LI YCK NL
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L PDV T + ++ LC G++ DA ++ FL E
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKL------------------FL-E 320
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G +PN T+ LI+ +C TG D ++++ M G+ + +TY+TLI GLC G
Sbjct: 321 MCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD 380
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ + K++ +E ++ G K Y ++ G +E + ALE K+M E + V
Sbjct: 381 LREAKKLV--IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAF 438
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I GFC +G V +A+R +M+E G P+ Y +IH +C++ V+ +L+KEM
Sbjct: 439 TALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC 498
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G++P T+N +L+GLC+QG + A L++ + G +P Y+ L++ C+ G
Sbjct: 499 DGHVPGVVTYNVLLNGLCKQGQMKNANMLLDA---MLNLGVVPDDITYNILLEGHCKHGN 555
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ L + KG++ DY ++ SL+
Sbjct: 556 REDFDKLQSE---KGLVQDYGSYTSLI 579
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 178/399 (44%), Gaps = 32/399 (8%)
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEE---- 161
V+++RG ++++++ L+++ +G A + + N + C Y +
Sbjct: 145 VLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHN-LQIPFHSCGYLFDRLMKL 203
Query: 162 NLVN-ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
NL + A E+ G+ PDV ++ LC ++ +A + E G
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG----------- 252
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
++G P V ++N LI+ YC++G LD + M + + + TY LI G
Sbjct: 253 --------KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLING 304
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
LC G++DD K+ M D G + +++ G + D +E +QM + +
Sbjct: 305 LCKEGQLDDANKLFLEMCD--RGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVK 362
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + I G C G++ +AK+ +M + G P+ Y LI C+E + A E+
Sbjct: 363 PDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEI 422
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
KEM G F ++SG CR+G V A + + E + G P Y+ +I
Sbjct: 423 RKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEA---GIKPDDATYTMVIHG 479
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C+KG ++ LL +M G +P +T+N LL L +Q
Sbjct: 480 FCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 165/362 (45%), Gaps = 65/362 (17%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD F ++ L + IN+ + + + P++ FN++++ K +L + F
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG-NLDQGF 280
Query: 68 YRKK-MMASGVQGDDYTYAILMKGL----------------------------------- 91
K+ MM + V D +TY++L+ GL
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
C+T R G ++ M +GVKP+ + YNTLI+ LCK G + A+ L+ +M + P+
Sbjct: 341 CVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
T+++LI CKE +L +AL + ++ G D V T ++ C G+V++A L E
Sbjct: 401 FTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLRE 460
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
E G + G VK G + LKEM+ G +P V TYN+L++ C+ G
Sbjct: 461 MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQ 520
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ +A + + M G+ + +TY+ L+ G C G +D D + KG + Y
Sbjct: 521 MKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDF--------DKLQSEKGLVQDY 572
Query: 312 NS 313
S
Sbjct: 573 GS 574
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL--YGLYRENQQDEALE- 329
+Y T+ LC+ + + +LQ + S++G S + SVL G ++ N L
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVV-SRKGKNSASSVFTSVLEARGTHQSNLVFSVLMN 163
Query: 330 ------YLKQMEKLFPRAVDRSLKI----LGFCVD-----GNVEDAKRCFDQMIEEGGVP 374
Y + F +L+I G+ D A ++++++ G P
Sbjct: 164 AYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPP 223
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+V ++ L+H C+E ++ EA L E+ G P +FNT+++G C+ GN+ +L
Sbjct: 224 DVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
M P YS LI LC++G A+ L ++M +G++P+ +T+ +L+
Sbjct: 284 RFMMEN---RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 225/483 (46%), Gaps = 37/483 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDL 63
I+ P+ F V+ RA + + ++ ++ + + P L I N+ + VLV + +D
Sbjct: 165 IERRPE--AFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDK 222
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A F ++M + + TY L+KG C +R+ D +L+ M +G P+ + Y T++
Sbjct: 223 AVRFL-ERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVM 281
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LCK ++ R LM M + P+ VT++ + K + AL L ++ F
Sbjct: 282 GFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRF 341
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
D V + ++ C GR+ A EI + EM KGC+P+V T
Sbjct: 342 RVDKVGYSAIVHSFCREGRMDKAKEI-------------------VNEMFSKGCIPDVVT 382
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y +I+ C+ +D A + M G N V+Y L+ GLC G + L+ ++M
Sbjct: 383 YTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG---NSLEAREMMN 439
Query: 299 DSKEGSK-GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
S+E Y+ +++G RE + EA + +++M K FP V+ +L I C +
Sbjct: 440 MSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE 499
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V++AKR +Q + G NVV + +IH +CQ++ + A L+ +M P T+
Sbjct: 500 KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYT 559
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T++ L ++G + A KL M+ + G +P Y +I C G + LL +M
Sbjct: 560 TIIDALGKKGRIEEATKLA---MKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM 616
Query: 476 VGK 478
+ +
Sbjct: 617 LSR 619
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 219/467 (46%), Gaps = 28/467 (5%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
++ ++L++L K + + M ++ + +M ++ + + L +M
Sbjct: 136 VYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMM 195
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
+ G++P+ I NT IH L ++ +A + M+ PN +T++ LI YC L
Sbjct: 196 QKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRL 255
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL--------- 214
+A L+ + G PD ++ V+ LC R+ + ++E+ + L
Sbjct: 256 EDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNT 315
Query: 215 --------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
G FL+E E + + Y+ ++ S+C G +D A ++ N+M G
Sbjct: 316 FVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKG 375
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ VTY ++I GLC ++D K+L+ M K G K Y ++L GL + E
Sbjct: 376 CIPDVVTYTSVINGLCQERKVDQAKKMLRQM--YKHGCKPNTVSYTALLNGLCKNGNSLE 433
Query: 327 ALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A E + E+ + P A+ S+ + GF +G +A +MI++G P V + LI
Sbjct: 434 AREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQ 493
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+ CQEE+V EA M++ +G F TV+ G C++ ++ AL L+ +DM +
Sbjct: 494 SLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL-DDMYLSNKH 552
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I AL +KG + A+ L ++M+ G +P +T+ +++
Sbjct: 553 --PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVI 597
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 182/391 (46%), Gaps = 29/391 (7%)
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALV 168
+ + ++Y ++ L K A+ ++ M E F ++ +Y + L NA+
Sbjct: 131 RHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMR 190
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
L G PD+ + +L R+ AV RFL+ M+
Sbjct: 191 XLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAV-------------------RFLERMQ 231
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
PNV TYN LI YC+ L+ A ++ +M G S + ++Y T++ LC RI
Sbjct: 232 IVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIK 291
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSL 346
+ +++ M +++ YN+ ++ L + DEALE+L++ E+ R V S
Sbjct: 292 ELRLLMEKMLKDSNLLPDQVT-YNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 350
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ FC +G ++ AK ++M +G +P+VV Y +I+ CQE +V +A +++++M HG
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P ++ +L+GLC+ GN A +++ +P + YS L+ +G
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWW---IPNAITYSVLMHGFRREGKSS 467
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A L+ +M+ KG P + N L+ L Q+
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQE 498
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 168/383 (43%), Gaps = 34/383 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M + G D TY ++ GLC +V K+L M G KPN+V Y L++ LCKNG
Sbjct: 370 EMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNG 429
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
AR +M+ EE PN +T+S+L+ + +E A L+ + GF P V I
Sbjct: 430 NSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEIN 489
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC +V +A RF+++ GC NV + +I +
Sbjct: 490 LLIQSLCQEEKVDEAK-------------------RFMEQCLNNGCAVNVVNFTTVIHGF 530
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ L++AL + +DM + + VTY T+I L GRI++ K+ M+ + G
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKL--AMKMLRVGWIP 588
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK---ILGFCVDGNVEDAKRC 363
Y +V++ R + + + LK +EK+ R R+ I C GN+E A +
Sbjct: 589 TPVTYRTVIHQYCRMGRVE---DLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKL 645
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+++ + LI +Y + + + M +P V L
Sbjct: 646 LGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLML 705
Query: 424 QGNVGTALKLVEEDMRGIGRGSL 446
+G A KL+ +R + RG +
Sbjct: 706 EGKSEEADKLI---LRFVERGRI 725
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 6/206 (2%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F TVI G + + + D + N P + + +I+D L K+ KM+
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 582
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G TY ++ C RV D KLL M SR + YN +I LC G +
Sbjct: 583 RVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLE 640
Query: 134 RARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A L+ + + + T +LI +Y + + + + + F+ +PD+ KV
Sbjct: 641 QAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVS 700
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLG 215
+ L G+ +A +++ E+GR+
Sbjct: 701 KKLMLEGKSEEADKLILRFVERGRIS 726
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 30/201 (14%)
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+Y + ++R A + M G P S NT + L + A++ +E M+ +
Sbjct: 178 SYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLER-MQIVE-- 234
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLL 502
P Y+ LIK C+ + A L+ +M KG PD +++ +++ +C ++ L
Sbjct: 235 IXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELR 294
Query: 503 LL---------LLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHT 553
LL LL + V++ VH LS HG G L
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLS--------------KHGHGDEALEFLREAEERR 340
Query: 554 FIIDR--RVEIGHVFCSSSSL 572
F +D+ I H FC +
Sbjct: 341 FRVDKVGYSAIVHSFCREGRM 361
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 206/443 (46%), Gaps = 38/443 (8%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
TP + +NS++D K + ++M + D TY L+ C R+ F+
Sbjct: 88 TPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFE 147
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LH MK+ G+KPN V Y+T I + CK G + A DM PN+ T++ LI A C
Sbjct: 148 FLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANC 207
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K NL AL L+E+ G +VVT T +L+ LC GR+ +A E+
Sbjct: 208 KAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEV-------------- 253
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ M G PN +TY L+ + + ++ A D+ +MK I + + Y T++
Sbjct: 254 -----FRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 308
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
GLC+ R+++ ++ +++S + I Y +++ ++ Q EAL L++M L
Sbjct: 309 WGLCNESRLEEAKLLIGEIKESGINTNAVI--YTTLMDAYFKSGQATEALTLLEEMLDL- 365
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
VD G C + E AK+ FD+M+++G +P+ + Y LI + ++EA L
Sbjct: 366 ---VD------GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 416
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M G + ++ GL G V A L++E IG+G LP Y LIK
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDE---MIGKGVLPDEVVYMCLIKK 473
Query: 459 LCEKGGFQSASMLLVQMVGKGIL 481
G A L +M +G++
Sbjct: 474 YYALGKVDEALELQNEMAKRGMI 496
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/485 (27%), Positives = 218/485 (44%), Gaps = 55/485 (11%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
+ +F + P + N++L L K DL+R F+ K M A+G++ +TY I++ LC
Sbjct: 12 MRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFF-KDMGAAGIKRSVFTYNIMIDYLCKEG 70
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFS 151
+ L MK G P+ V YN+LI K G + + M+ +P+ +T++
Sbjct: 71 DLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYN 130
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI +CK E + A L + + G P+VVT + ++ C G + +A+
Sbjct: 131 ALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI--------- 181
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+F +M R PN TY LI + C+ G L AL + ++ GI N
Sbjct: 182 ----------KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNV 231
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VTY L+ GLC GR+ + ++ + M ++ G Y ++++G + + + A + L
Sbjct: 232 VTYTALLDGLCEEGRMKEAEEVFRAMLNA--GVAPNQETYTALVHGFIKAKEMEYAKDIL 289
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY--- 386
K+M++ + P + + G C + +E+AK ++ E G N VIY L+ AY
Sbjct: 290 KEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKS 349
Query: 387 --------------------CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
C+ A +L EM G +P + ++ G + GN
Sbjct: 350 GQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 409
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L + R I G Y+ LI L G Q A LL +M+GKG+LPD +
Sbjct: 410 LQEALNLRD---RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 466
Query: 487 WNSLL 491
+ L+
Sbjct: 467 YMCLI 471
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 124/271 (45%), Gaps = 8/271 (2%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
FLK M + P + N L+ + G D + F DM GI + TY+ +I LC
Sbjct: 9 FLK-MRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLC 67
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPR 340
G ++ + M+++ G I YNS++ G + DE + +QM+ P
Sbjct: 68 KEGDLEMARSLFTQMKEA--GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPD 125
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + I FC + A +M G PNVV Y I A+C+E ++EA +
Sbjct: 126 VITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFV 185
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M P T+ +++ C+ GN+ ALKLVEE ++ G Y+ L+ LC
Sbjct: 186 DMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA---GIKLNVVTYTALLDGLC 242
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E+G + A + M+ G+ P+ T+ +L+
Sbjct: 243 EEGRMKEAEEVFRAMLNAGVAPNQETYTALV 273
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R +M+ G++ D + Y L+ GL + +V LL M +GV P+ V+Y LI
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 476
Query: 129 NGKVGRARSLMSDMEEPNDVT 149
GKV A L ++M + +T
Sbjct: 477 LGKVDEALELQNEMAKRGMIT 497
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E+A CF +M + P + L+H + R + + K+M G T+N
Sbjct: 2 LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ LC++G++ A L + G P Y+ LI + G + QM
Sbjct: 62 MIDYLCKEGDLEMARSLFTQMKEA---GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118
Query: 477 GKGILPDYLTWNSLLICLSQ 496
PD +T+N+L+ C +
Sbjct: 119 DADCDPDVITYNALINCFCK 138
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 251/539 (46%), Gaps = 63/539 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + +I GL + + + D + R + P++ ++ +++ V+E
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+A+GV D + Y L+ GLC +V + LL M +G+KPN+ Y I+ K
Sbjct: 509 LKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSK 568
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G++ A DM PN+V ++ILI +C N V AL + G +PD+
Sbjct: 569 SGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRA 628
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ L G+ +A+ + +FLK G +P+V YN LIS
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVF---------------LKFLK----TGVVPDVFLYNSLIS 669
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR--GLCSGGRIDDGLKILQLMEDSKE 302
+C+ G ++ A ++++M +GI+ N V Y+TLI G C G + + K+ M
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMI---- 725
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG-------- 350
SKG ISP Y ++ G +E ++AL LF A +S+ L
Sbjct: 726 -SKG-ISPDGYIYCILIDGCGKEGNLEKALS-------LFHEAQQKSVGSLSAFNSLIDS 776
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC G V +A+ FD M+++ PN+V Y LI AY + E + EA +L +M +P
Sbjct: 777 FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 836
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++L + GN + L ++ + RGI ++ Y + A C++G A
Sbjct: 837 TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA----YGVMASAYCKEGKSLEAL 892
Query: 470 MLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRC 526
LL + + +GI + +++L+ +C +Q + +L LL+EM ELS K C
Sbjct: 893 KLLNKSLVEGIKLEDDVFDALIFHLCKEKQIS-TVLELLSEMGK-----EELSLSSKTC 945
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 225/488 (46%), Gaps = 42/488 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + I GL + +++ ++ L+ + P + ++D K+
Sbjct: 274 PNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLI 333
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M +SG+ + +TY L+ G + + ++ M +RG+K N V YN +I + K
Sbjct: 334 FESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAK 393
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ +A SL ++M EP+ T+++LI Y K ++ A LL + + P T
Sbjct: 394 AGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFT 453
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LC + A E+L++ M R G PNV Y LI
Sbjct: 454 YSVLISGLCHSSDLQKANEVLDQ-------------------MIRNGVKPNVFMYGTLIK 494
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+Y + + A+++ M +G+ + Y+ LI GLC ++++ +L M G
Sbjct: 495 AYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM-----GE 549
Query: 305 KGRISPYNSVLYG----LYRENQQDEALE-YLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
KG I P N+ YG LY ++ + + E Y K M + P V ++ I G C GN
Sbjct: 550 KG-IKP-NAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+A F M+E+G +P++ Y +IH+ + + +EA + + G +P +N++
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK--ALCEKGGFQSASMLLVQM 475
+SG C++G++ A +L +E + G P Y+ LI C+ G A L +M
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLH---NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEM 724
Query: 476 VGKGILPD 483
+ KGI PD
Sbjct: 725 ISKGISPD 732
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 185/410 (45%), Gaps = 29/410 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
LM+ L N +G +K+ M + P+ Y +I + CK G V + + ++S+ME+
Sbjct: 213 LMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC 272
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
PN T++ I C+ + AL + + G PD T T +++ C R +A
Sbjct: 273 KPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKL 332
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
I E M G PN TY LI + + G ++ AL + ++M
Sbjct: 333 IFES-------------------MPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ N VTY+ +I G+ G + + + M + G + YN ++ G + +
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMA--GIEPDTWTYNLLIDGYLKSHD 431
Query: 324 QDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+A E L +M+ KL P S+ I G C +++ A DQMI G PNV +Y
Sbjct: 432 MAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGT 491
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI AY QE R A EL+K M +G LP +N ++ GLCR V A K++ DM
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEA-KMLLVDMG-- 548
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P + Y I + G Q A M+ GI+P+ + + L+
Sbjct: 549 EKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 205/456 (44%), Gaps = 39/456 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +I GL RA+ + + + + P+ + + +++ K +I +A +
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K M++SG+ ++ Y IL+KG C + M +G+ P+ Y+ +IHSL
Sbjct: 579 F-KDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNGK A + + P+ ++ LI +CKE ++ A L ++ G P++V
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697
Query: 184 TITKVLELL--CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
++ C G + +A ++ +E +G + G ++
Sbjct: 698 VYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 757
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
E ++K + ++ +N LI S+C+ G + A ++F+DM ++ N VTY LI
Sbjct: 758 EAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAE 816
Query: 286 RIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
+++ ++ ME I P Y S+L + + + + K ME +
Sbjct: 817 MMEEAEQLFLDMETR------NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIAC 870
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
A+ + +C +G +A + ++ + EG ++D LI C+E+++ EL+
Sbjct: 871 DAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELL 930
Query: 400 KEMTGHGYLPIAS-TFNTVLSGLCRQGNVGTALKLV 434
EM G L ++S T NT+L G + GN A K++
Sbjct: 931 SEM-GKEELSLSSKTCNTLLLGFYKSGNEDEASKVL 965
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 28/335 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-DVLVKEDIDLARAF 67
PD ++ ++I G + I + D + + P++ ++N+++ D + +L AF
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAF 718
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+M++ G+ D Y Y IL+ G + L H + + V S +N+LI S
Sbjct: 719 KLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSA-FNSLIDSF 777
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+GKV AR L DM + PN VT++ILI AY K E + A L + +P+
Sbjct: 778 CKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNT 837
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T T +L +G + + K+ME +G + Y ++
Sbjct: 838 LTYTSLLLSYNQIGNRFKMISLF-------------------KDMEARGIACDAIAYGVM 878
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
S+YC+ G AL + N ++GI +D LI LC +I L++L M KE
Sbjct: 879 ASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM--GKE 936
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
N++L G Y+ +DEA + L M++L
Sbjct: 937 ELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 971
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 172/374 (45%), Gaps = 30/374 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + +I L + + + + + P + ++NS++ KE DI+ A
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Query: 68 YRKKMMASGVQGDDYTYAILMK--GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
Y +M+ +G+ + Y L+ G C + + + FKL M S+G+ P+ IY LI
Sbjct: 684 Y-DEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 742
Query: 126 LCKNGKVGRARSLMSDMEEPND---VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G + +A SL + ++ + F+ LI ++CK ++ A L + P++
Sbjct: 743 CGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 802
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T +++ + G+ E++EE+ + +ME + +PN TY L
Sbjct: 803 VTYTILID---AYGKA----EMMEEAEQ------------LFLDMETRNIIPNTLTYTSL 843
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ SY + G + +F DM+ GI+ + + Y + C G+ + LK+L + E
Sbjct: 844 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN--KSLVE 901
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G K ++++++ L +E Q LE L +M E+L + + +LGF GN ++A
Sbjct: 902 GIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEA 961
Query: 361 KRCFDQMIEEGGVP 374
+ M G VP
Sbjct: 962 SKVLGVMQRLGWVP 975
>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 223/529 (42%), Gaps = 92/529 (17%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
+++ R M ++ + A R P + N +++ L++ ID+A A YR +
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRH-LKRL 221
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI----------------- 118
G+ +DYTY I +K LC + + M+ GV PN+V
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 119 ------------------YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
Y +I C K+ A + DM P+ + LI A
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITK----------------VLELLCSVGRVMD 200
YCK NL+ A+ L S G ++V K V++ LC +G+V +
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEE 401
Query: 201 AVEILEE-SGEQGRL---------------GKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
AVE+L E G + L GK+ +EM+ +G P++ TYNIL+
Sbjct: 402 AVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVG 461
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ G+ AL++ + + G+ N T++ +I GLC G++ + L +ED
Sbjct: 462 GFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKC--- 518
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK----------LFPRAVDRSLKILGFCVD 354
+ Y++++ G + N +A E ++ K + P + I FC D
Sbjct: 519 ---LENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRD 575
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G+++ A+ FD ++E G P+V+ Y +I+ YC+ +REA ++ +M G P T+
Sbjct: 576 GDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITY 635
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
VL G + N+ A+ L +E I RG P Y+ L+ C G
Sbjct: 636 TVVLDGHSKTNNLQDAINLYDE---MIARGLQPDIVTYTALLPGKCNFG 681
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 177/445 (39%), Gaps = 103/445 (23%)
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN------ 146
L N + +K G + N Y LI LC+ + +SL+S++
Sbjct: 73 LKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGF 132
Query: 147 DVT------------------------FSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
D+T +L+ AY + A+ L ++ GFVP +
Sbjct: 133 DITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHI 192
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
++ ++ L G++ AV I + ++R G PN TY I
Sbjct: 193 MSCNFLMNRLIEHGKIDMAVAIY-------------------RHLKRLGLNPNDYTYGIF 233
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + C G + A+DVF +M+ G++ N VT T I GLCS R D G + L+ + +
Sbjct: 234 IKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAAN- 292
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
P ++ Y + I GFC + +++A+
Sbjct: 293 ------WPIDTFAY----------------------------TAVIRGFCSEMKLKEAED 318
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL----------------MKEMTGHG 406
F M+ EG P+ IY LIHAYC+ + +A L KE G
Sbjct: 319 VFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSG 378
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+N V+ LC+ G V A++L+ E M+G R SL HY+ LI C +G
Sbjct: 379 IFLDEVLYNIVVDALCKLGKVEEAVELLNE-MKG-RRMSL-DVVHYTTLIAGYCLQGKLV 435
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A + +M +GI PD +T+N L+
Sbjct: 436 DAKNMFEEMKERGIEPDIVTYNILV 460
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 38/288 (13%)
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK-ILQLMEDSKEGSKG------- 306
A F +K G N TY LIR LC R++ L+ +L + SKE G
Sbjct: 80 AWSFFTQLKESGFQHNVDTYAALIRVLCR-WRLERKLQSLLSEIVGSKESVLGFDITALF 138
Query: 307 ---------RISPYNSVLY--------GLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
++SVL R DEA++ L Q ++ P + +
Sbjct: 139 DVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFL 198
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G ++ A + + G PN Y I A C++ EA ++ +EM G
Sbjct: 199 MNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGV 258
Query: 408 LPIASTFNTVLSGLC--RQGNVGTALKLVEEDMRGIGRGSLP-GSGHYSPLIKALCEKGG 464
P A T +T + GLC ++ ++G E +R + + P + Y+ +I+ C +
Sbjct: 259 NPNAVTCSTYIEGLCSHKRSDLGY------EALRALRAANWPIDTFAYTAVIRGFCSEMK 312
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL-NEMVS 511
+ A + + MV +GI PD + +L+ + L + L N+MVS
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVS 360
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 181/358 (50%), Gaps = 28/358 (7%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILIC 155
KLL M+ +G P+ V YN +++ +C+ G+V A + ++ EPN V+++I++
Sbjct: 11 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 70
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
C E +A L+ + G P+VVT ++ LC G V A+E+LE+
Sbjct: 71 GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ-------- 122
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
+ + GC PN +YN L+ ++C+ +D A+ + M G + V+Y+
Sbjct: 123 -----------IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYN 171
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM- 334
TL+ LC G +D +++L ++D +G + YN+V+ GL + + EALE L +M
Sbjct: 172 TLLTALCRSGEVDVAVELLHQLKD--KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 229
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ L P + S G C + +EDA R F ++ + G PN V+Y+ +I C+
Sbjct: 230 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 289
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSG 450
A +L M G+G +P ST+ ++ GL +G + A L++E RG+ R SL G
Sbjct: 290 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKG 347
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 164/344 (47%), Gaps = 23/344 (6%)
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
A CK A+ LL++ G PD+VT V+ +C GRV DA+E L+ G
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 216 K-------VKGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+KG C + EM +KGC PNV T+N+LIS C G+++ AL+V
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ G + N ++Y+ L+ C ++D + L LM G I YN++L L
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM--VSRGCYPDIVSYNTLLTALC 178
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
R + D A+E L Q++ P + + I G G ++A ++M+ +G P+++
Sbjct: 179 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 238
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y + C+E+R+ +A ++ G P +N ++ GLC++ +A+ L
Sbjct: 239 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLF--- 295
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
IG G +P Y+ LI+ L +G + A LL ++ +G++
Sbjct: 296 AYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 168/343 (48%), Gaps = 29/343 (8%)
Query: 43 TPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
TP + +N +++ + +E +D A F K + + G + + +Y I++KGLC R D
Sbjct: 24 TPDIVTYNVVVNGICQEGRVDDAIEFL-KNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 82
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L+ M +G PN V +N LI LC+ G V A ++ + + PN ++++ L+ A+
Sbjct: 83 ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 142
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK++ + A+ L+ S G PD+V+ +L LC G V AVE+L
Sbjct: 143 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH----------- 191
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+++ KGC P + +YN +I + G AL++ N+M G+ + +TY T+
Sbjct: 192 --------QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
GLC RI+D ++ ++D G + YN+++ GL + + A++ M
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDM--GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGN 301
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
P ++ I G +G +++A+ D++ G V +I
Sbjct: 302 GCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLI 344
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 147/282 (52%), Gaps = 7/282 (2%)
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
K + L EM KGC P++ TYN++++ C+ G +D A++ ++ G N V+Y+ +
Sbjct: 9 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
++GLC+ R +D +++ M ++G + +N ++ L R+ + ALE L+Q+ K
Sbjct: 69 LKGLCTAERWEDAEELMGEM--GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 126
Query: 338 --FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P ++ + + FC ++ A D M+ G P++V Y+ L+ A C+ V A
Sbjct: 127 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 186
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL+ ++ G P+ ++NTV+ GL + G AL+L+ E + +G P YS +
Sbjct: 187 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNE---MVSKGLQPDIITYSTI 243
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LC + + A ++ GI P+ + +N++++ L ++
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 285
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 25/265 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
PP+ F +I L R ++ ++ + + ++ TP+ +N +L K+ +D A A
Sbjct: 94 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 153
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F M++ G D +Y L+ LC + V +LLH +K +G P + YNT+I L
Sbjct: 154 FL-DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 212
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K GK A L+++M +P+ +T+S + C+E+ + +A+ K G P+
Sbjct: 213 TKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNT 272
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V ++ LC A+++ M GC+PN TY IL
Sbjct: 273 VLYNAIILGLCKRRETHSAIDL-------------------FAYMIGNGCMPNESTYTIL 313
Query: 243 ISSYCETGVLDSALDVFNDMKIDGI 267
I G++ A D+ +++ G+
Sbjct: 314 IEGLAYEGLIKEARDLLDELCSRGV 338
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T++ L R+ ++ V+ + P L +N+++D L K
Sbjct: 165 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALEL 224
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M++ G+Q D TY+ + GLC +R+ D + ++ G++PN+V+YN +I LCK
Sbjct: 225 LNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCK 284
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ A L + M PN+ T++ILI E + A LL++ S G V
Sbjct: 285 RRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+ GL R I D ++A V + P+ ++N+I+ L K +
Sbjct: 235 PDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDL 294
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M+ +G ++ TY IL++GL + + LL + SRGV S+I I L
Sbjct: 295 FAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAIRLL 352
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 233/543 (42%), Gaps = 63/543 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P S + +I L AR ++ + S+ +F +++ L +E ++ A A
Sbjct: 174 PPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALAL 233
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ S ++ D Y + + V +K H +K+ G++P+ V Y +++ LC
Sbjct: 234 V-DEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292
Query: 128 KNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++G A L ME DV ++ +I Y E +A LLE+ G +P VV
Sbjct: 293 KAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVV 352
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGR---------------LGKVKGGCRFLKEME 228
+ +L L +V +A+ + + + + G+V + EME
Sbjct: 353 SFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEME 412
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PN+ + NI++ C+ L+ A +F G + N VTY +LI GL G+ID
Sbjct: 413 LAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKID 472
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
D ++ + M D+ + I Y S++ + ++++ + K+M + R L +
Sbjct: 473 DAYRLFEKMLDAGHDANPII--YTSLIRNFFMHGRKEDGHKIYKEMIR---RGGRPDLTL 527
Query: 349 LGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
L +D G VE + F+ M G +P+V Y LIH + + RE S + + M+
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH------------ 451
G+ A +N V+ GLC+ G V A +++EE ++ G
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647
Query: 452 --------------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS LI + G A ++L +M+ KG+ P+ TWNSL+
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707
Query: 492 ICL 494
L
Sbjct: 708 DAL 710
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 219/507 (43%), Gaps = 61/507 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
P + T+I G G A +D K + + PS+ FNSIL L K +D A
Sbjct: 314 PCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTL 373
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M + + TY I++ LC+ RV + +K+ M+ G+ PN + N ++ LC
Sbjct: 374 F--DVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLC 431
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A + E PN VT+ LI K+ + +A L EK G + +
Sbjct: 432 KANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPI 491
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ GR D +I +E +G + G+V+ G ++M
Sbjct: 492 IYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDM 551
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LP+V +Y+ILI + G ++F M G + + Y+ ++ GLC G++
Sbjct: 552 KSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKV 611
Query: 288 DDGLKILQ--------------------------------LMEDSK-EGSKGRISPYNSV 314
D ++L+ L E++K +G + + Y+S+
Sbjct: 612 DKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSL 671
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ G + + DEA L++M K L P + + +++A CF M E
Sbjct: 672 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKC 731
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN Y LI+ C+ ++ +A +EM G +P T+ T++SGL + GN+ A
Sbjct: 732 SPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYS 791
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKAL 459
L E R G +P S ++ LI+ +
Sbjct: 792 LFE---RFKTNGGIPDSASFNALIEGM 815
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 64/370 (17%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P L + N+ +D + K +++ RA + + M + G D +Y+IL+ GL + +
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEKGRAIF-EDMKSFGFLPDVRSYSILIHGLTKAGQARETSN 581
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
+ M +G ++ YN ++ LCK+GKV +A ++ +M+ P T+ ++
Sbjct: 582 IFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLA 641
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K + L A +L E++ S G +V+ + +++ VGR+ +A ILEE
Sbjct: 642 KIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE----------- 690
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M +KG PNV T+N L+ + +T +D AL F MK S N TY LI
Sbjct: 691 --------MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILI 742
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GLC R+ YN +A + ++M+K
Sbjct: 743 NGLC------------------------RVQKYN-------------KAFVFWQEMQKQG 765
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
L P V + I G GN+ DA F++ GG+P+ ++ LI R EA
Sbjct: 766 LIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAY 825
Query: 397 ELMKEMTGHG 406
++ +E G
Sbjct: 826 QVFEETRLRG 835
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 14/323 (4%)
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D+ + KVLE + +G + R +++ R + M P Y
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+LI + E + AL++ M+ G + + TL+R L G+++ L ++ D
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALV----DE 236
Query: 301 KEGS--KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+GS + I YN + + D A ++ +++ L P V + + C G
Sbjct: 237 VKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGR 296
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ +A+ F QM E VP Y+ +I Y ER +A +L++ + G +P +FN+
Sbjct: 297 LGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNS 356
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+ L ++ V AL L + + + + P Y+ +I LC G A + +M
Sbjct: 357 ILTCLGKKRKVDEALTLFDV----MKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEME 412
Query: 477 GKGILPDYLTWNSLL--ICLSQQ 497
G+ P+ L+ N ++ +C + Q
Sbjct: 413 LAGLFPNLLSVNIMVDRLCKANQ 435
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 4/168 (2%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++MM G+ + YT+ LM L T + + MK PN+ Y+ LI+ LC+
Sbjct: 689 EEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRV 748
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
K +A +M++ PN VT++ +I K N+ +A L E+ + G +PD +
Sbjct: 749 QKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASF 808
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
++E + + R M+A ++ EE+ +G VK L + + CL
Sbjct: 809 NALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECL 856
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/500 (27%), Positives = 229/500 (45%), Gaps = 42/500 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
PD + TVI G + DV KA DL + P L ++S++ L K +D A
Sbjct: 219 PDVVAYNTVIDGFFKE---GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKA 275
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF R+ M+ GV D++TY L+ G T + + ++ M+ + + P+ V NTL+
Sbjct: 276 EAFLRQ-MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMG 334
Query: 125 SLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLCK GK+ AR + M + P+ +++I++ Y + LV+ L + G P
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 394
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D+ T +++ + G + A+ I EM G P+V TY
Sbjct: 395 DIYTFNVLIKAYANCGMLDKAMIIF-------------------NEMRDHGVKPHVVTYM 435
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-ED 299
+I++ C G +D A++ FN M G+ + Y LI+G C+ G + LK +L+ E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL---LKAKELISEI 492
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEY--LKQMEKLFPRAVDRSLKILGFCVDGNV 357
G + I + S++ L + + +A L L P AV ++ + G+C+ G +
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A R FD M+ G PNVV Y L++ YC+ R+ E L +EM G P +N +
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 418 LSGLCRQG-NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ GL G V +K E GI YS +++ L + F A L ++
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCT----YSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 477 GKGILPDYLTWNSLLICLSQ 496
+ D +T N+++ + Q
Sbjct: 669 AMNVKIDIITLNTMIAGMFQ 688
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 219/477 (45%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ D + L+KG C R +
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ YN L+ SLC GK G+A L+ M E P+ V ++ +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQG 212
I + KE ++ A L ++ G PD+VT + V+ LC R MD E L + +G
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK-ARAMDKAEAFLRQMVNKG 286
Query: 213 RL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
L G+ K R KEM R+ LP+V N L+ S C+ G + A
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + + +Y ++ G + G + D + LM +G I +N ++
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM--LGDGIAPDIYTFNVLIK 404
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D+A+ +M + P V I C G ++DA F+QMI++G VP
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ Y CLI +C + +A EL+ E+ +G F ++++ LC+ G V A +
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + G P + Y+ L+ C G + A + MV GI P+ + + +L+
Sbjct: 525 D---LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 192/460 (41%), Gaps = 65/460 (14%)
Query: 63 LARAFYRKKMMASGVQGD------DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
LA A + + AS QG YTYAILM +R + G++ ++
Sbjct: 91 LAVALFNRA--ASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA 148
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I + L+ C+ + A +LL ++
Sbjct: 149 IIASHLLKGFCEAKRTDEALD------------------------------ILLHRTPEL 178
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV + +L+ LC+ G+ A ++L E G + C P+V
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV-----------------CSPDV 221
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN +I + + G ++ A D+F +M GI + VTY +++ LC +D L+
Sbjct: 222 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ 281
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M + +G YN+++YG Q EA+ K+M + + P V + + C
Sbjct: 282 MVN--KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKY 339
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +++A+ FD M +G P+V Y +++ Y + + + ++L M G G P TF
Sbjct: 340 GKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 399
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G + A+ + E MR G P Y +I ALC G A Q
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNE-MR--DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVM 514
M+ +G++PD ++ L+ + LL E++S +M
Sbjct: 457 MIDQGVVPDKYAYHCLIQGFCTHGS---LLKAKELISEIM 493
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 155/349 (44%), Gaps = 26/349 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +I+ M++ + + + + P + + +++ L + +D A
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ GV D Y Y L++G C + +L+ + + G++ + V + ++I++LC
Sbjct: 454 F-NQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512
Query: 128 KNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G+V A+++ D+ P+ V +++L+ YC + AL + + S G P+V
Sbjct: 513 KLGRVMDAQNIF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 571
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
V ++ C +GR+ + + + E ++G G+ E
Sbjct: 572 VGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHE 631
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G N TY+I++ + D A+ +F +++ + + +T +T+I G+ R
Sbjct: 632 MTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+++ + + S+ G Y+ ++ L +E +EA + M+
Sbjct: 692 VEEAKDLFASI--SRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQ 738
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 27/284 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARAF 67
D F ++I L + + D DL + P ++N ++D LV + R F
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+++G++ + Y L+ G C R+ +G L M +G+KP++++YN +I L
Sbjct: 560 --DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+ A+ +M E N T+SI++ K A+ L ++ + D++
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T+ ++ + RV +A ++ + R G +P TY+I+I
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLF-------------------ASISRSGLVPCAVTYSIMI 718
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
++ + G+++ A D+F+ M+ G + + ++R L I
Sbjct: 719 TNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ PS ++N I+D L + + +M SG+ + TY+I+++GL +
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
L +++ VK + + NT+I + + +V A+ L + + P VT+SI+I
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
KE + A + + G PD + V+ L ++ A L + E+
Sbjct: 722 LKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDLA 64
++ + V+RGL + R ++ + + N+ + N+++ + V+E DL
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ R ++ V TY+I++ L V + + M++ G +P+S + N ++
Sbjct: 700 ASISRSGLVPCAV-----TYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754
Query: 125 SLCKNGKVGRARSLMSDMEEPN 146
L K ++ RA + +S ++E N
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERN 776
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 225/491 (45%), Gaps = 40/491 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-----KEDID 62
PP+ + TVI GL +A++++ + + P +N ++ + KE +
Sbjct: 193 PPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQ 252
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ ++M G++ D TYA+L+ LC R + M +G+KP+ IY L
Sbjct: 253 ML-----EEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAIL 307
Query: 123 IHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+H G + S + M PN F+I+ CAY K+ + A+ + K G
Sbjct: 308 LHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGL 367
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PDVV+ +++ LC +GRV DAV L+ +M +G PN+
Sbjct: 368 SPDVVSFGALIDALCKLGRVDDAV--LQ-----------------FNQMINEGVTPNIFV 408
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
++ L+ C G + A ++F ++ GI + V ++TL+ LC+ GR+ + +++ LM
Sbjct: 409 FSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM- 467
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+ G + + YN+++ G + DEA + L M L P ++ + G+C
Sbjct: 468 -IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
V+DA F +M+ +G P V Y+ ++H Q R EA+EL M T+N
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+GLC+ V A K+ R + S ++ +I AL + G + A L +
Sbjct: 587 ILNGLCKNNFVDEAFKMFR---RLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATIS 643
Query: 477 GKGILPDYLTW 487
G++PD +T+
Sbjct: 644 AYGLVPDVVTY 654
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/521 (24%), Positives = 231/521 (44%), Gaps = 74/521 (14%)
Query: 17 VIRGLGRARMINDVVKATDLV----SRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKK 71
+++GL A+ +++ ATD++ S F P + +N++++ +E ++ A + +
Sbjct: 131 LLKGLCDAKRVDE---ATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLE- 186
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
MM G+ + TY ++ GLC V + M RGVKP++ YN LIH GK
Sbjct: 187 MMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGK 246
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
++ +M EP+ +T+++L+ CK A + + F G PDV I
Sbjct: 247 WKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDV-AIYA 305
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L L +G L ++ FL M G PN +NI+ +Y
Sbjct: 306 IL---------------LHGYATKGALSEMHS---FLDLMVGNGVSPNRRIFNIMFCAYA 347
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ +++ A+ +FN M+ G+S + V++ LI LC GR+DD +LQ + EG
Sbjct: 348 KKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDA--VLQFNQMINEGVTPN 405
Query: 308 ISPYNSVLYGLYRENQQDEA----LEYLKQ---MEKLF---------------------- 338
I ++S++YGL + ++A E L Q ++ +F
Sbjct: 406 IFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLID 465
Query: 339 --------PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
P + + + G C+ G +++A + D M+ G PN Y L+ YC+
Sbjct: 466 LMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKAR 525
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
RV +A L +EM G P+ +T+NT+L GL + G A +L + I +
Sbjct: 526 RVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELY---LNMINSRTKCDIY 582
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ ++ LC+ A + ++ K D +T+N ++
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMI 623
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/515 (24%), Positives = 230/515 (44%), Gaps = 30/515 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +I G +VV+ + +S + P + +LD L K AR F
Sbjct: 229 PDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLF 288
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G++ D YAIL+ G + + L +M GV PN I+N + +
Sbjct: 289 F-DSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYA 347
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + A + + M + P+ V+F LI A CK + +A++ + + G P++
Sbjct: 348 KKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIF 407
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ LC+VG+ A E+ E +QG G+V R + M
Sbjct: 408 VFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM 467
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R G PNV +YN L++ +C TG +D A + + M +G+ N TY L+RG C R+
Sbjct: 468 IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRV 527
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DD + + M +G ++ YN++L+GL++ + EA E M + +
Sbjct: 528 DDAYSLFREM--LMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYN 585
Query: 348 IL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I+ G C + V++A + F ++ + + V ++ +I A + R +A +L ++ +
Sbjct: 586 IILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAY 645
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G +P T+ + L +G++G L + G+ P S + L++ L +G
Sbjct: 646 GLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKS---GTAPNSHMLNALVRRLLHRGDI 702
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A + L ++ K + T S+LI L + +
Sbjct: 703 SRAGVYLYKLDEKNFSLEAST-TSMLISLYSRGEY 736
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 138/564 (24%), Positives = 238/564 (42%), Gaps = 104/564 (18%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA-----FYR-KKMMASGVQGD 80
+++ +K D + S++ FN +L V+ + A F R + +S V +
Sbjct: 30 LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89
Query: 81 DYTYAIL-----------------------------------MKGLCLTNRVGDGFKLLH 105
TY+IL +KGLC RV + +L
Sbjct: 90 ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149
Query: 106 V-MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
+ M G P+ V YNT+I+ + G+V +A +L +M + PN VT++ +I CK
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKA 209
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------- 212
+ + A + ++ G PD T ++ S G+ + V++LEE G
Sbjct: 210 QVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITY 269
Query: 213 --------RLGKVKGGCRFLKEMERKGCLPNVDTY------------------------- 239
+ G+ + F M RKG P+V Y
Sbjct: 270 ALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVG 329
Query: 240 ----------NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
NI+ +Y + +++ A+ +FN M+ G+S + V++ LI LC GR+DD
Sbjct: 330 NGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDD 389
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
+LQ + EG I ++S++YGL + ++A E ++ + + AV +
Sbjct: 390 A--VLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ C +G V +A+R D MI G PNV+ Y+ L+ +C R+ EA++L+ M +G
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+ +L G C+ V A L E + +G P Y+ ++ L + G F
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLM---KGVTPVVATYNTILHGLFQTGRFSE 564
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A+ L + M+ D T+N +L
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIIL 588
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 182/408 (44%), Gaps = 33/408 (8%)
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-------PNDVTFSILI 154
+LLH + V+ + + + + C + R SL + M PN T+SILI
Sbjct: 39 ELLHCARPASVRAFNQLLTVVSRAGCSSAS-ERVVSLFTRMARECSSKVAPNACTYSILI 97
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
+C+ L + G+ +V+ I+++L+ LC RV +A +IL
Sbjct: 98 GCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDIL--------- 148
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
L M GC P+V YN +I+ + G ++ A ++F +M GI N VTY
Sbjct: 149 ---------LLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTY 199
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
T+I GLC +D + Q M D G K YN +++G + E ++ L++M
Sbjct: 200 TTVIDGLCKAQVVDRAKGVFQQMID--RGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257
Query: 335 EK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
L P + +L + C +G +A+ FD M +G P+V IY L+H Y + +
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
E + M G+G P FN + ++ + A+ + + MR +G P +
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNK-MR--QQGLSPDVVSF 374
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
LI ALC+ G A + QM+ +G+ P+ ++SL+ L W
Sbjct: 375 GALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKW 422
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 211/472 (44%), Gaps = 36/472 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD +I+ ++ G ++++ DL+ ++P+ +IFN + K+ +
Sbjct: 299 PDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHI 358
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+ D ++ L+ LC RV D + M + GV PN ++++L++ LC
Sbjct: 359 FNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCT 418
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK +A L ++ + + V F+ L+C C E ++ A L++ G P+V++
Sbjct: 419 VGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVIS 478
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C GR+ +A ++L+ M G PN TY IL+
Sbjct: 479 YNTLVAGHCLTGRIDEAAKLLD-------------------VMVSNGLKPNEFTYTILLR 519
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC+ +D A +F +M + G++ TY+T++ GL GR + ++ M +S+ +
Sbjct: 520 GYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR--T 577
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSLKILGFCVDGNVEDAKR 362
K I YN +L GL + N DEA + +++ P+ +V ++ I G EDA
Sbjct: 578 KCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMD 637
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + G VP+VV Y + +E + E L M G P + N ++ L
Sbjct: 638 LFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLL 697
Query: 423 RQGNVGTA----LKLVEEDMRGIGRG-----SLPGSGHYSPLIKALCEKGGF 465
+G++ A KL E++ SL G Y P K+L EK F
Sbjct: 698 HRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSLPEKYRF 749
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 183/400 (45%), Gaps = 28/400 (7%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALV 168
P+ V YNTLI CK G RA + +++ PN V+F L+ CK +AL
Sbjct: 9 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------G 212
+ ++ G DV ++ C +G + A +L G
Sbjct: 69 VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ G+ M++ GC+P+ YN+LIS + G +D AL++ DM GI +
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY+ +I L S GR + +M+ K + YN++L GL + + DEA +
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPD--VVTYNTLLNGLKKLRRTDEACDLFD 246
Query: 333 QME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M+ K P I G +EDA ++++ G VPN IY+ LI +C+
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSG 306
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+V + EL ++M P + T+ ++ G R+G+ A++L++E +R G P
Sbjct: 307 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR---EGHTPALA 363
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
Y+ LI++L G + A L +M+ KG PD T+++L
Sbjct: 364 TYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 185/420 (44%), Gaps = 31/420 (7%)
Query: 43 TPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
P + +N+++ K D D A +R+ + + ++ L+ LC +R D
Sbjct: 8 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV----TFSILICAY 157
+ M G++ + + NTLIH C+ G + +AR L+ M V T+S L+ A
Sbjct: 68 AVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDAL 127
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
K AL + G +PD V ++ L G+V +A+E+LE+
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLED---------- 177
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
M RKG +P+ TYNI+I G + A F MK S + VTY+TL
Sbjct: 178 ---------MNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL 228
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ GL R D+ + M+ +K ++ + +++ L + + ++ALE ++ K+
Sbjct: 229 LNGLKKLRRTDEACDLFDEMQANK--CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKM 286
Query: 338 --FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P + + I GFC G V+ F MIE P+ + Y L+ + + A
Sbjct: 287 GHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 346
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
EL++EM G+ P +T+N ++ L G V A L +E I +G P YS L
Sbjct: 347 MELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKE---MIAKGFNPDMQTYSAL 403
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 161/372 (43%), Gaps = 32/372 (8%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAVE 203
P+ V ++ LI YCK + AL + + G P+ V+ ++ LC + R DA+
Sbjct: 9 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ +E M G +V+ N LI C G+L A + + M
Sbjct: 69 VFQE-------------------MLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMT 109
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ TY L+ L GR L++ M+ K G YN ++ L ++ +
Sbjct: 110 AHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQ--KAGCMPDTVVYNVLISCLGKQGK 167
Query: 324 QDEALEYLKQMEK--LFP--RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
DEALE L+ M + + P R + + +L C G E A F M P+VV Y
Sbjct: 168 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSC--GRYEKAYSFFGMMKRRKHSPDVVTY 225
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ L++ + R EA +L EM + +P +TF T++ L + G + AL E+ R
Sbjct: 226 NTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL---EQSAR 282
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-T 498
+ G +P S Y+ LI C G L M+ PD +T+ L++ S++
Sbjct: 283 LVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGH 342
Query: 499 TWLLLLLLNEMV 510
T + + LL EMV
Sbjct: 343 TSMAMELLQEMV 354
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 39/261 (14%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG-ISWNFVTYDTLIRGLCSGGRIDDG 290
C P+V YN LI+ YC+ G D ALD+F +K +G N V++DTL+ LC R D
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
L + Q M + G + ++ N++++
Sbjct: 67 LAVFQEMLGA--GLQADVNVCNTLIHCT-------------------------------- 92
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G + A+R M V +V Y L+ A + R +A E+ M G +P
Sbjct: 93 -CRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPD 151
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+N ++S L +QG V AL+L+E+ R +G +P Y+ +I L G ++ A
Sbjct: 152 TVVYNVLISCLGKQGKVDEALELLEDMNR---KGIMPDCRTYNIVIDVLSSCGRYEKAYS 208
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
M + PD +T+N+LL
Sbjct: 209 FFGMMKRRKHSPDVVTYNTLL 229
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 27/275 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD ++ +I LG+ +++ ++ + ++R + P + +N ++DVL + A +F
Sbjct: 150 PDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSF 209
Query: 68 YRKKMMASGVQGDD-YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ MM D TY L+ GL R + L M++ P+ + TLI +L
Sbjct: 210 F--GMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTL 267
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G++ A + + + PN ++ LI +C+ + L + PD
Sbjct: 268 AKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDS 327
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T T ++ G A+E+L+E M R+G P + TYN+L
Sbjct: 328 ITYTILVLGFSRRGHTSMAMELLQE-------------------MVREGHTPALATYNVL 368
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
I S G ++ A +F +M G + + TY L
Sbjct: 369 IRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 4/187 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T++ GL + R ++ D + P L F +++D L K
Sbjct: 220 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 279
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++ G + Y Y L+ G C + +V G++L M P+S+ Y L+ +
Sbjct: 280 SARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 339
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G A L+ +M P T+++LI + + +A L ++ + GF PD+ T
Sbjct: 340 RGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQT 399
Query: 185 ITKVLEL 191
+ + L
Sbjct: 400 YSALPNL 406
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 221/492 (44%), Gaps = 33/492 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD + F +I A +N A + + + F +L L K+ A
Sbjct: 11 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHS 125
++M G D ++Y+ L+KGLC + + +L+H+M G P+ V Y+T+IH
Sbjct: 71 VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K G VG+A +L M + PN VT + +I CK + + A +L++ +P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T ++ S G+ +AV R LKEM R G PNV TYN+
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAV-------------------RILKEMSRDGQRPNVVTYNM 231
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI C++G A ++FN M G + TY +L+ G + G + + + LM +
Sbjct: 232 LIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLM--VQ 289
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
G + ++ +Y + + DEA +M++L P V + I G C G ++D
Sbjct: 290 NGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDD 349
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F QMI++G PN++ + LIH + + +A EL EM G P + F ++
Sbjct: 350 AMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMID 409
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
L ++G V A KL + R G+ P Y+ +I G LL M+ G
Sbjct: 410 RLFKEGKVTEAQKLFDLMPRA---GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 466
Query: 480 ILPDYLTWNSLL 491
+ P +T+N+LL
Sbjct: 467 LKPTAVTFNTLL 478
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 178/429 (41%), Gaps = 54/429 (12%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A V D T+ IL+ C + GF L + G++ ++V + L+ +LC +
Sbjct: 6 AKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTS 65
Query: 134 RARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
A + ++L + G PDV + + +L+ LC
Sbjct: 66 DAMN------------------------------IVLRRMPELGCTPDVFSYSTLLKGLC 95
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ + +A E++ E G C P+V +Y+ +I + + G +
Sbjct: 96 AEKKCEEAAELIHMMAEDG-----------------DNCPPDVVSYSTVIHGFFKEGDVG 138
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A +F M GI N VT +++I GLC +D +LQ M D E + YNS
Sbjct: 139 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMID--EHIMPNCTTYNS 196
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+++G Q EA+ LK+M + P V ++ I C G +A+ F+ MI+ G
Sbjct: 197 LIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSG 256
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P+ Y L+H Y E + E + + M +G TF+ + C+ G + A
Sbjct: 257 PKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEA- 315
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L M+ +G +P Y+ +I LC+ G A QM+ G+ P+ +T+ +L+
Sbjct: 316 SLTFIKMQQLG--FMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLI 373
Query: 492 ICLSQQTTW 500
S W
Sbjct: 374 HGFSMYGKW 382
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 20/147 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLAR 65
PPD +IF +I L + + + K DL+ R P++ +N+++ + E ++ +
Sbjct: 398 PPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMK 457
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M+ G++ T+ L+ G M S G+KP+ TLI S
Sbjct: 458 LL--DDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVDTCKTLIDS 499
Query: 126 LCKNGKVGRARSLMSDMEEPNDVTFSI 152
C++G++ +L +M D T +I
Sbjct: 500 CCEDGRIEDILTLFREMLGKADKTDTI 526
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 230/507 (45%), Gaps = 38/507 (7%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKG 90
+A + R P+L N+ILD LVK + LAR + +M+ G+ TY L+
Sbjct: 124 EALSVFGRLRELPALPACNAILDGLVKAHM-LARVWELFDEMLGRGMVPSVVTYNTLINA 182
Query: 91 LCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PN 146
V +++ M +R + PN V Y T+I++LC+ +G A L +M+E PN
Sbjct: 183 CRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPN 242
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
T++ L+ ++ K +N+ +ALV G VP+ V T +++ LC R+ +A I
Sbjct: 243 LYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNI-- 300
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
FL +M R P V YN LI +G AL F ++
Sbjct: 301 ----------------FL-DMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKE 343
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + T ++RGLC GG++ + L++M+ S G + YN ++ + DE
Sbjct: 344 LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS--GIALNAAAYNVLIDEYCKSGNLDE 401
Query: 327 ALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
AL +M ++ P V S I G +G +E A + +M+ +G PNVV Y LIH
Sbjct: 402 ALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIH 461
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE---DMRGI 441
+ + + A L KEM G A T + ++ GLCR+ V A++ + E +
Sbjct: 462 GHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSE 521
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
S+ S Y LI L G + A M G++PD T+ ++ L +
Sbjct: 522 KNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLC-----M 576
Query: 502 LLLLLNEMVSFVMVVHELSAKEKRCKL 528
L +LN M+ + +V ++ K +C +
Sbjct: 577 LGYVLNAMMLYADMV-KVGVKPTKCAM 602
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 166/413 (40%), Gaps = 66/413 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + T+I L I D + M P+L +N+++ K D I A F
Sbjct: 206 PNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVF 265
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH--- 124
Y ++ G+ +D + L+ GLC NR+ + + M V P +YN+LIH
Sbjct: 266 Y-YDLLKCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAF 324
Query: 125 --------------------------------SLCKNGKVGRARSLMSDMEEP----NDV 148
LC G++ A + M++ N
Sbjct: 325 RSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAA 384
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+++LI YCK NL ALV + G P+VVT + +++
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLID------------------ 426
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ G+++ EM KG PNV TY LI + + G +D+A + +M+ GI
Sbjct: 427 -GHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIY 485
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK----GRISPYNSVLYGLYRENQQ 324
N +T L+ GLC R+ D ++ + K+ K Y +++YGLY + Q
Sbjct: 486 SNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQY 545
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+EA + M + P +L I G C+ G V +A + M++ G P
Sbjct: 546 NEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPT 598
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 194/409 (47%), Gaps = 39/409 (9%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSF 174
+ +N ++ LC GK RA L+ M PN VT++ +I +C + AL ++ E
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 213
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKV 217
G P+ T V+ C VGRV +AV++ +E +G + GK+
Sbjct: 214 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 273
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M +G V TYN+L+ + G A ++ +M G++ + TY+ L
Sbjct: 274 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNIL 333
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G C G + L+I + M S+ G + + Y S++Y L ++ Q +++ +KL
Sbjct: 334 INGHCKEGNVKKALEIFENM--SRRGVRATVVTYTSLIYALSKKGQ-------VQETDKL 384
Query: 338 FPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
F AV R ++ I GN++ A +M ++ P+ V Y+ L+ C
Sbjct: 385 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 444
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
RV EA +L+ EMT G P T+NT++SG +G+V AL++ E M +G P
Sbjct: 445 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM---NKGFNPT 501
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI+ LC+ G A ++ +MV GI PD T+ SL+ L+ +
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 181/386 (46%), Gaps = 32/386 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY ++ G C RV ++ M+ RG + PN Y T+I CK G+V A + +
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246
Query: 142 M-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M +P V ++ LI YC + L AL+ ++ G V T ++ L G
Sbjct: 247 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 306
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R +A E++EE G KG +V TYNILI+ +C+ G + AL
Sbjct: 307 RGTEAYELVEEMGG-------------------KGLALDVFTYNILINGHCKEGNVKKAL 347
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F +M G+ VTY +LI L G++ + K+ E + G + + YN+++
Sbjct: 348 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFD--EAVRRGIRPDLVLYNALIN 405
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D A E + +MEK + P V + + G C+ G V++A++ D+M + G P
Sbjct: 406 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 465
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y+ LI Y + V++A + EM G+ P T+N ++ GLC+ G A +V
Sbjct: 466 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 525
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALC 460
+E + G P Y LI+ L
Sbjct: 526 KE---MVENGITPDDSTYISLIEGLT 548
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 173/370 (46%), Gaps = 56/370 (15%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGR 134
G+ + YTY ++ G C RV + K+ M ++G VKP +V+YN LI C GK+
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275
Query: 135 ARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A M E T+++L+ A + A L+E+ G DV T ++
Sbjct: 276 ALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILIN 335
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
C G V A+EI E +G + G+V+ + E R+G P
Sbjct: 336 GHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRP 395
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
++ YN LI+S+ +G +D A ++ +M+ I+ + VTY+TL+RGLC GR+D+ K++
Sbjct: 396 DLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLI 455
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD 354
M +K G + + YN++ I G+ +
Sbjct: 456 DEM--TKRGIQPDLVTYNTL---------------------------------ISGYSMK 480
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G+V+DA R ++M+ +G P ++ Y+ LI C+ + +A ++KEM +G P ST+
Sbjct: 481 GDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTY 540
Query: 415 NTVLSGLCRQ 424
+++ GL +
Sbjct: 541 ISLIEGLTTE 550
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 165/339 (48%), Gaps = 27/339 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
P++ + TVI G + +++ VK D ++++ + P ++N+++ + +D A
Sbjct: 219 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA-L 277
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
YR +M+ GV TY +L+ L + R + ++L+ M +G+ + YN LI+
Sbjct: 278 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGH 337
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G V +A + +M VT++ LI A K+ + L +++ G PD+
Sbjct: 338 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 397
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGR-----------------LGKVKGGCRFLK 225
V ++ + G + A EI+ E E+ R LG+V + +
Sbjct: 398 VLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 456
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM ++G P++ TYN LIS Y G + AL + N+M G + +TY+ LI+GLC G
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 516
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
+ DD +++ M ++ G S Y S++ GL E+++
Sbjct: 517 QGDDAENMVKEMVEN--GITPDDSTYISLIEGLTTEDER 553
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 224/475 (47%), Gaps = 35/475 (7%)
Query: 36 LVSRFNMTPSLKIFNSI-------LDVLVKEDIDLARAFYRKKMMASGVQGDDY-TYAIL 87
++SR + ++++F + ++L+K D R +++ D TY IL
Sbjct: 238 VLSRLPLDEAIELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMASAPDVVTYGIL 297
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP-- 145
+ G C + + KLL M + GV+PN+ +Y +++ LC G + A ++ DM +
Sbjct: 298 IHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKV 357
Query: 146 --NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
++ ++ ++ +C + +LV+A ++ G D VT T ++ LC + +A +
Sbjct: 358 ILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEK 417
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L+E + + GK+ + M ++G PNV TY L C
Sbjct: 418 LLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLC 477
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G + +A ++ ++M G+ N TY++LI GLC G ++ ++ + M+ + K
Sbjct: 478 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTA--CLKPD 535
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ Y +++ L + D A L++M + + P V ++ + GFC+ G VE K+ D
Sbjct: 536 VYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLD 595
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M+E+ PN Y+ L+ YC E ++ +E+ K M P +T+N ++ G C+
Sbjct: 596 WMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKAR 655
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
N+ AL +E I +G + YS LI+ L +K F A L M +G+
Sbjct: 656 NMKEALYFHDE---MIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGL 707
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 202/456 (44%), Gaps = 28/456 (6%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--D 62
+ S PD + +I G + + VK D + + P+ ++ S++ +L + D
Sbjct: 285 MASAPDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISD 344
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
R + M+ V D+ Y ++ G C + + M+ +G+ + V Y T+
Sbjct: 345 ALRVV--EDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTM 402
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I+ LC+ ++ A L+ +M + ++VT+++LI YCK + A + G
Sbjct: 403 INGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGV 462
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
P+VVT T + + LC G V A E+L E +G + G ++ R
Sbjct: 463 TPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMR 522
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+ +M+ P+V TY LI + C++G LD A + +M GI VTY+ L+ G C
Sbjct: 523 TMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFC 582
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GR++ G K+L M + + + YNS++ EN E K M + P
Sbjct: 583 MSGRVEGGKKLLDWMLE--KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPN 640
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I G C N+++A D+MI++G Y LI ++++ EA EL
Sbjct: 641 ENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFH 700
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+M G + ++ + + N+ + L L +E
Sbjct: 701 DMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDE 736
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 191/398 (47%), Gaps = 37/398 (9%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEEN 162
LL ++ G+ P+ N ++ L + A L ++ N +++IL+ A C
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHKNVCSYNILLKALCDAGR 274
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ +A L ++ S PDVVT ++ C++G + +AV++L+E V GG
Sbjct: 275 VKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDE--------MVAGGVE 323
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
PN Y +++ C+ G + AL V DM + + Y T++ G C
Sbjct: 324 -----------PNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFC 372
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
+ G + + M+ + G Y +++ GL R + +EA + L++M +L
Sbjct: 373 NKGDLVSARRWFDEMQRKGLATDGVT--YTTMINGLCRAVELEEAEKLLQEMWARRLDVD 430
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ I G+C G + +A + + M++ G PNVV Y L C++ V+ A+EL+
Sbjct: 431 EVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLH 490
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKAL 459
EM+ G A T+N++++GLC+ G + A++ M + L P Y+ LI AL
Sbjct: 491 EMSNKGLELNACTYNSLINGLCKAGYLEQAMRT----MADMDTACLKPDVYTYTTLIDAL 546
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
C+ G A LL +M+ KGI P +T+N L+ C+S
Sbjct: 547 CKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 584
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 18/277 (6%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+ + + G P+ + N ++S LD A+++F ++ N +Y+ L++ LC
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELP----HKNVCSYNILLKALC 270
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GR+ D ++ M + + + Y +++G + + A++ L +M + P
Sbjct: 271 DAGRVKDARQLFDEMASAPD-----VVTYGILIHGHCALGELENAVKLLDEMVAGGVEPN 325
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
A + + C G + DA R + M++ + + +Y ++ +C + + A
Sbjct: 326 ATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFD 385
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM G T+ T+++GLCR + A KL++E R Y+ LI C
Sbjct: 386 EMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQE---MWARRLDVDEVTYTVLIDGYC 442
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++G A + MV +G+ P+ +T+ +L L +Q
Sbjct: 443 KRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ 479
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 206/457 (45%), Gaps = 65/457 (14%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y ++ G C +V F+LL MK RGVK + ++++TLI LC+ G++ A M
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61
Query: 144 E---PNDVTFSILICAYCKEENLVNALVL---LEKSF--SFGFVPDVVTITKVLELLCSV 195
E PN +T++ ++ CK + L L +EK + S G PDV++ + V++ LC
Sbjct: 62 EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
RV A E + K M GC PNV TY+ LI C+ +D A
Sbjct: 122 QRVDKAYE-------------------YFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEA 162
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS--------------- 300
+ +K + + + Y+ ++ G G+ + L++L M++
Sbjct: 163 YSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHA 222
Query: 301 ------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
K G K + YN ++GL + + DEA L +M K+ P
Sbjct: 223 LWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPD 282
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ S I GFC G ++ A F +M+ +P+ V + L+H + + ++ REA + +
Sbjct: 283 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 342
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G++P T+N ++ +C +V +AL++ + R + P + Y+PLI+ LC
Sbjct: 343 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR---KKRQPDANTYAPLIQCLC 399
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A L M ++P+ ++L+ L +Q
Sbjct: 400 RARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQ 436
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 134/530 (25%), Positives = 228/530 (43%), Gaps = 56/530 (10%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMT----PSLKIFNSILDVLVK-E 59
+ P+ + TV+ GL +A I++ ++ D+ R+ + P + +++++D L K +
Sbjct: 63 ECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQ 122
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A ++ K+M A G + TY+ L+ GLC +RV + + LL +K + P ++ Y
Sbjct: 123 RVDKAYEYF-KRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFS 175
N +++ + GK L+ M+E N + F+ ++ A K + A E+
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G P+VVT + LC G+V +A R L EM P+
Sbjct: 242 SGKKPNVVTYNVAVHGLCKAGKVDEAY-------------------RILLEMVESKVTPD 282
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY+ +I +C+ G +D A DVF M + + VT+ TL+ G + + ++ +
Sbjct: 283 VITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHE 342
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
M ++ G + YN ++ + + + ALE +M +K P A + I C
Sbjct: 343 DMVNA--GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCR 400
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS----------------- 396
V++AK D M + VPN I L+ C++ V EA
Sbjct: 401 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDE 460
Query: 397 --ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
E++++M G P +T+ VL LC V +A+ E + RG PG Y+
Sbjct: 461 AVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFE---KMASRGCAPGLVTYTL 517
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLL 504
LI C A + MV G P T +L CL LL+
Sbjct: 518 LIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQDLLV 567
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 195/423 (46%), Gaps = 67/423 (15%)
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEEPN---DVTF-SILICAYCKEENLVNALVLLEKS 173
+Y T+I+ CK G+V +A L+ +M+E DV S LI C++ + AL KS
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQF-KS 59
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK--- 230
P+V+T V+ LC R+ + +E+ + +ME++
Sbjct: 60 MGEECSPNVITYNTVVNGLCKANRIDEGLELFD-------------------DMEKRYEA 100
Query: 231 --GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
GC P+V +Y+ +I + C+ +D A + F M+ G + N VTY +LI GLC R+D
Sbjct: 101 SHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVD 160
Query: 289 DGLKI--------------------------------LQLMEDSKEGSKG-RISPYNSVL 315
+ + L+L+ KE G I +N++L
Sbjct: 161 EAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAML 220
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+ L++ ++Q++A ++ +++ K P V ++ + G C G V++A R +M+E
Sbjct: 221 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVT 280
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+V+ Y +I +C+ R+ +A ++ M H +P TF T+L G A +
Sbjct: 281 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFR- 339
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
V EDM + G +PG Y+ L+ +C +SA + +M K PD T+ L+ C
Sbjct: 340 VHEDM--VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQC 397
Query: 494 LSQ 496
L +
Sbjct: 398 LCR 400
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 220/506 (43%), Gaps = 49/506 (9%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ TVI G +A ++ + D + + + + ++++ L ++ + A + K
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKG-RIDEALEQFKS 59
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-----GVKPNSVIYNTLIHSLC 127
M + TY ++ GLC NR+ +G +L M+ R G +P+ + Y+T+I +LC
Sbjct: 60 MGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +V +A M PN VT+S LI CK + + A LL + VP +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
V+ G+ + +E+L E+G + + + C+F + +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G PNV TYN+ + C+ G +D A + +M ++ + +TY ++I G C GR+
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
D + M E ++ + ++L+G + EA + M ++
Sbjct: 300 DKADDVFTRMM-VHECIPHPVT-FMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357
Query: 348 ILGFCVDG--NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+L CV G +VE A + +M + P+ Y LI C+ RV EA E + M
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+P + + ++ LC+QG V A +++ + +C+ G
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEACSVLDN-------------------VVEICKAGEP 458
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A ++ QMV KG+ PD T+ ++L
Sbjct: 459 DEAVEVIEQMVLKGVRPDEATYVAVL 484
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y +I+ +C+ +V +A EL+ EM G +T++ GLCR+G + AL E
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEAL----EQ 56
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM-----VGKGILPDYLTWNSLL- 491
+ +G P Y+ ++ LC+ L M G PD +++++++
Sbjct: 57 FKSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVID 116
Query: 492 -ICLSQQ 497
+C +Q+
Sbjct: 117 ALCKAQR 123
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 240/503 (47%), Gaps = 36/503 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMAS 75
+++GL R V + + ++ P + +N+++ E +L +A +M S
Sbjct: 148 LLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFC-EGKELEKALQLANEMQGS 206
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G T+ IL+ C ++ + LL MK +G++ + ++Y +LI C G++ R
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRG 266
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
++L ++ E P +T++ LI +CK L A + E G P+V T T +++
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDG 326
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC VG+ +A+++L M +K PNV TYNI+I+ C+ +
Sbjct: 327 LCGVGKTKEALQLL-------------------NLMLQKDEEPNVVTYNIIINKLCKDSL 367
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ AL++ MK + +TY++L+ GLC+ G +D+ K+L LM + + +
Sbjct: 368 VADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISF 427
Query: 312 NSVLYGLYRENQQDEALE-YLKQMEKLFPRAVDRSLKILGFCV-DGNVEDAKRCFDQMIE 369
N++++GL + N+ +AL+ Y +EKL + + +L + G+V A + Q+
Sbjct: 428 NALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISN 487
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
VPN Y +I +C+ + A L+ +M P +N +LS LC++G +
Sbjct: 488 SKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQ 547
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L EE R S P ++ +I + G +SA LLV M G+ PD T++
Sbjct: 548 AWRLFEEMQRD---DSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSK 604
Query: 490 LLICLSQQTTWLLLLLLNEMVSF 512
L+ +L L L+E +SF
Sbjct: 605 LI------NRFLKLGYLDEAISF 621
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 210/449 (46%), Gaps = 39/449 (8%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G + Y Y IL+KGLC G LL M+ + P+ V YNT+I C+ +
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192
Query: 132 VGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ +A L ++M+ + VT+ ILI A+CK + A+ LL++ G D++ T
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTS 252
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C G + + +E E+G +LG++K + M +G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PNV TY LI C G AL + N M N VTY+ +I LC + D L
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADAL 372
Query: 292 KILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK----LFPRAVD 343
+I++LM+ K R P YNS+L GL + DEA + L M K P +
Sbjct: 373 EIVELMK------KRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVIS 426
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I G C + A +D ++E+ G ++V + L+++ + V +A EL K+++
Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPLIKALCEK 462
+P + T+ T++ G C+ G + A L+ + MR LP S Y+ L+ +LC+K
Sbjct: 487 NSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCK-MR---LSELPPSVFDYNCLLSSLCKK 542
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A L +M PD +++N ++
Sbjct: 543 GTLDQAWRLFEEMQRDDSFPDVISFNIMI 571
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 266/560 (47%), Gaps = 64/560 (11%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGL--CLTNRVGDGFK--LL 104
N+++ LV+ + ++A +FYRK + + D + + + GL C GF +L
Sbjct: 76 NNLMATLVRSRNHEVAFSFYRKML-----ETDTFINFVSLSGLLECFVQMRKTGFAHGVL 130
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
+M RG N YN L+ LC+N + G+A SL+ +M + P+ V+++ +I +C+
Sbjct: 131 ALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEG 190
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------- 212
+ L AL L + G +VT +++ C G++ +A+ +L+E +G
Sbjct: 191 KELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVY 250
Query: 213 --------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
G++ G E+ +G P TYN LI +C+ G L A ++F M
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMME 310
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ N TY LI GLC G+ + L++L LM E + + YN ++ L +++
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE--EPNVVTYNIIINKLCKDSLV 368
Query: 325 DEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYD 380
+ALE ++ M+K R + + L G C G++++A + M+++ P+V+ ++
Sbjct: 369 ADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFN 428
Query: 381 CLIHAYCQEERVREA---SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
LIH C+ R+ +A +L+ E G G + T N +L+ + G+V A++L ++
Sbjct: 429 ALIHGLCKGNRLHQALDIYDLLVEKLGAGDIV---TTNILLNSTLKSGDVNKAMELWKQ- 484
Query: 438 MRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I + P S Y+ +I C+ G A LL +M + P +N LL L +
Sbjct: 485 ---ISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCK 541
Query: 497 QTT----WLLLLLLN------EMVSF-VMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGL 545
+ T W L + +++SF +M+ L A + + L ++H GL
Sbjct: 542 KGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHA------GL 595
Query: 546 RIHDTTHTFIIDRRVEIGHV 565
T++ +I+R +++G++
Sbjct: 596 SPDLFTYSKLINRFLKLGYL 615
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 182/389 (46%), Gaps = 29/389 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
MM GV+ + YTY L+ GLC + + +LL++M + +PN V YN +I+ LCK+
Sbjct: 308 MMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSL 367
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA---LVLLEKSFSFGFVPDVVT 184
V A ++ M++ P+++T++ L+ C + +L A L L+ K S+ PDV++
Sbjct: 368 VADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYT-DPDVIS 426
Query: 185 ITKVLELLCSVGRVMDAVEI----LEESGEQG------------RLGKVKGGCRFLKEME 228
++ LC R+ A++I +E+ G + G V K++
Sbjct: 427 FNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQIS 486
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+PN DTY +I +C+TG+L+ A + M++ + + Y+ L+ LC G +D
Sbjct: 487 NSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLD 546
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
++ + M+ ++ S + +N ++ G + A L M L P S
Sbjct: 547 QAWRLFEEMQ--RDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSK 604
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I F G +++A FD+MI+ G P+ I D ++ + + +E +K++
Sbjct: 605 LINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKD 664
Query: 407 YLPIASTFNTVLSGLC-RQGNVGTALKLV 434
+ TV+ +C GN+ A +L+
Sbjct: 665 VVLDKELTCTVMDYMCSSSGNMDIAKRLL 693
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 159/352 (45%), Gaps = 32/352 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + ++ +L+ + + P++ +N I++ L K+ + +A A
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSL-VADALE 373
Query: 69 RKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNTLIHS 125
++M + D+ TY L+ GLC + + KLL++M S P+ + +N LIH
Sbjct: 374 IVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHG 433
Query: 126 LCKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK ++ +A L+ + + VT +IL+ + K ++ A+ L ++ + VP+
Sbjct: 434 LCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPN 493
Query: 182 VVTITKVLELLCSVG-------------------RVMDAVEILEESGEQGRLGKVKGGCR 222
T T +++ C G V D +L ++G L + R
Sbjct: 494 SDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQ---AWR 550
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+EM+R P+V ++NI+I + G + SA + M G+S + TY LI
Sbjct: 551 LFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFL 610
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G +D+ + M DS I +SVL + + D+ E++K++
Sbjct: 611 KLGYLDEAISFFDKMIDSGFEPDAHIC--DSVLKYCISQGETDKLTEFVKKL 660
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 27/401 (6%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G Q + +YA L+ G+C KLL + R KPN +Y+T+I +LC
Sbjct: 151 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC 210
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V A L S+M + VT+S LI +C E L A+ LL + P+V
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270
Query: 184 TITKVLELLCSVGRVMDAVEILE--------------ESGEQGRL--GKVKGGCRFLKEM 227
T +++ LC G+V +A +L + G +VK M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P+V TY ILI+ +C+ ++D AL++F +M + VTY +LI GLC GRI
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
++ M D G + Y+S++ GL + D A+ +M +++ P +
Sbjct: 391 PYVWDLIDEMRD--RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT 448
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ + G C G ++DA+ F ++ +G NV Y+ +I+ +C++ + EA ++ +M +
Sbjct: 449 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN 508
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
G +P A TF T++ L ++ A KL+ + I RG L
Sbjct: 509 GCIPNAFTFETIIIALFKKDENDKAEKLLRQ---MIARGLL 546
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 211/491 (42%), Gaps = 33/491 (6%)
Query: 35 DLVSRFN------MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D VS+FN TP + FN ILD K ++ G+Q D T IL+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEE 144
C ++ GF +L + RG P++V NTLI LC G+V +A L++ +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
N V+++ LI CK + A+ LL K P+V + +++ LC V +A +
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221
Query: 205 LEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
E +G GK+K L EM K PNV TYNIL+ + C+
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G + A V M + + +TY TL+ G + + M S G +
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM--SLMGVTPDV 339
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y ++ G + DEAL K+M + + P V S I G C G + D+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M + G +V+ Y LI C+ + A L +M P TF +L GLC+ G
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ A ++ ++ + +G Y+ +I C++G + A +L +M G +P+ T
Sbjct: 460 LKDAQEVFQDLLT---KGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516
Query: 487 WNSLLICLSQQ 497
+ +++I L ++
Sbjct: 517 FETIIIALFKK 527
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 197/410 (48%), Gaps = 45/410 (10%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ T+I G+ + I D A L+ + + P+++++++I+D L K +
Sbjct: 167 YATLINGVCK---IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 223
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G+ D TY+ L+ G C+ ++ + LL+ M + + PN YN L+ +LCK G
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYC------KEENLVNALVLLEKSFSFGFVP 180
KV A+S+++ M +P+ +T+S L+ Y K +++ NA+ L+ G P
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM------GVTP 337
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DV T T ++ C V +A+ + KEM +K +P + TY+
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLF-------------------KEMHQKNMVPGIVTYS 378
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI C++G + D+ ++M+ G + +TY +LI GLC G +D + + M+D
Sbjct: 379 SLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ + I + +L GL + + +A E + + + ++ I G C G +E
Sbjct: 439 E--IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
+A +M + G +PN ++ +I A +++ +A +L+++M G L
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 181/385 (47%), Gaps = 32/385 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY ++ G C RV ++ M+ RG + PN Y T+I CK G+V A + +
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206
Query: 142 M-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M +P V ++ LI YC + L AL+ ++ G V T ++ L G
Sbjct: 207 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 266
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R +A E++EE G KG P+V TYNILI+ +C+ G + AL
Sbjct: 267 RGTEAYELVEEMGG-------------------KGLAPDVFTYNILINGHCKEGNVKKAL 307
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F +M G+ VTY LI L G++ + K+ E + G + + YN+++
Sbjct: 308 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD--EAVRRGIRPDLVLYNALIN 365
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D A E + +MEK + P V + + G C+ G V++A++ D+M E G P
Sbjct: 366 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 425
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y+ LI Y + V++A + EM G+ P T+N ++ GLC+ G A +V
Sbjct: 426 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 485
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKAL 459
+E + G P Y LI+ L
Sbjct: 486 KE---MVENGITPDDSTYISLIEGL 507
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 194/409 (47%), Gaps = 39/409 (9%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSF 174
+ +N ++ LC GK RA L+ M PN VT++ +I +C + AL ++ E
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 173
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKV 217
G P+ T V+ C VGRV +AV++ +E +G + GK+
Sbjct: 174 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 233
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M +G V TYN+L+ + G A ++ +M G++ + TY+ L
Sbjct: 234 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 293
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G C G + L+I + M S+ G + + Y +++Y L ++ Q +++ +KL
Sbjct: 294 INGHCKEGNVKKALEIFENM--SRRGVRATVVTYTALIYALSKKGQ-------VQETDKL 344
Query: 338 FPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
F AV R ++ I GN++ A +M ++ P+ V Y+ L+ C
Sbjct: 345 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 404
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
RV EA +L+ EMT G P T+NT++SG +G+V AL++ E M +G P
Sbjct: 405 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM---NKGFNPT 461
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI+ LC+ G A ++ +MV GI PD T+ SL+ L+ +
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 60/389 (15%)
Query: 57 VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPN 115
V+ +D+ R + G+ + YTY ++ G C RV + K+ M ++G VKP
Sbjct: 161 VQAALDIMREMRER----GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 216
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLE 171
+V+YN LI C GK+ A M E T+++L+ A + A L+E
Sbjct: 217 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 276
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLG 215
+ G PDV T ++ C G V A+EI E +G + G
Sbjct: 277 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 336
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
+V+ + E R+G P++ YN LI+S+ +G +D A ++ +M+ I+ + VTY+
Sbjct: 337 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 396
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
TL+RGLC GR+D+ K++ M ++ G + + YN++
Sbjct: 397 TLMRGLCLLGRVDEARKLIDEM--TERGIQPDLVTYNTL--------------------- 433
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
I G+ + G+V+DA R ++M+ +G P ++ Y+ LI C+ + +A
Sbjct: 434 ------------ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 481
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++KEM +G P ST+ +++ GL +
Sbjct: 482 ENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 165/339 (48%), Gaps = 27/339 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
P++ + TVI G + +++ VK D ++++ + P ++N+++ + +D A
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA-L 237
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
YR +M+ GV TY +L+ L + R + ++L+ M +G+ P+ YN LI+
Sbjct: 238 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 297
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G V +A + +M VT++ LI A K+ + L +++ G PD+
Sbjct: 298 CKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDL 357
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGR-----------------LGKVKGGCRFLK 225
V ++ + G + A EI+ E E+ R LG+V + +
Sbjct: 358 VLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 416
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +G P++ TYN LIS Y G + AL + N+M G + +TY+ LI+GLC G
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 476
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
+ DD +++ M ++ G S Y S++ GL E+++
Sbjct: 477 QGDDAENMVKEMVEN--GITPDDSTYISLIEGLTTEDER 513
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 195/386 (50%), Gaps = 27/386 (6%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F K+M+ ++ ++ I++ GLC ++ ++ MK RGV N + YNTLI
Sbjct: 149 FVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGY 208
Query: 127 CKNGKVGR---ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
CK GK+G+ A +++ +M PN+VTF+ILI +CK++N+ A+ + + G
Sbjct: 209 CKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVK 268
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+VVT ++ LC+ G+V +A + ++ + VK
Sbjct: 269 PNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGEL 328
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+M ++G PNV TYNILI +YC+ ++ A ++ M G+ + TY+ LI GLC
Sbjct: 329 FDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCR 388
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G ++ ++ M D+K K + YN ++ L + + +AL L +M + L P
Sbjct: 389 KGDLEAARNLVSEM-DTKH-LKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQ 446
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + I G+C +GN+ A QM + G + NV Y+ LI +C+++++ +A+ L+ E
Sbjct: 447 LTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNE 506
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNV 427
M G +P T+ V + +G V
Sbjct: 507 MLEKGLIPNRMTYEIVTEEMMEKGFV 532
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 180/368 (48%), Gaps = 28/368 (7%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N + IL+ AY K +++ +G V + ++ L VG + D +
Sbjct: 92 NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151
Query: 206 EESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+E + ++GK+ +++M+ +G NV TYN LI YC+
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211
Query: 250 GVLDS---ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
G + A + +M+ DGI N VT++ LI G C + +K+ M +++G K
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEM--NRQGVKP 269
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ YNS++ GL + +EA QM L P + + + GFC + V+ A F
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D M ++G PNV Y+ LI AYC++E + +A L + M G G P ST+N +++GLCR+
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389
Query: 425 GNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G++ A LV E D + + + Y+ LI +LC KG + A LL +M KG+ P
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLIT----YNILIDSLCNKGEMKKALRLLDEMCRKGLKPS 445
Query: 484 YLTWNSLL 491
LT+N+++
Sbjct: 446 QLTYNTMI 453
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 198/429 (46%), Gaps = 62/429 (14%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILIC 155
GF+ G+K + N L+ L K G++G + +M EP ++F+I+I
Sbjct: 112 GFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVIN 171
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
CK L A ++E G +V+T +++ C +G++ G
Sbjct: 172 GLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKI----------------G 215
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K+ LKEM G PN T+NILI +C+ + +A+ VF +M G+ N VTY+
Sbjct: 216 KMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYN 275
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+LI GLC+ G++++ + M +S K I +N++L G + +A E M
Sbjct: 276 SLINGLCNNGKVNEATALRDQMVNS--CLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333
Query: 336 K--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
K + P ++ I +C D N+EDA + M+ +G P+V Y+CLI C++ +
Sbjct: 334 KQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE 393
Query: 394 EASELMKEM-TGH----------------------------------GYLPIASTFNTVL 418
A L+ EM T H G P T+NT++
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI 453
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
G C++GN+ AL L + M +GR L Y+ LIK C+K + A+ LL +M+ K
Sbjct: 454 DGYCKEGNLRAALNLRSQ-MEKVGR--LANVATYNVLIKGFCKKDKLEDANGLLNEMLEK 510
Query: 479 GILPDYLTW 487
G++P+ +T+
Sbjct: 511 GLIPNRMTY 519
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 182/381 (47%), Gaps = 40/381 (10%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNM---TPSLKIFNSILDVLVKEDIDLARAFYR- 69
F VI GL + +N KA D++ + + ++ +N+++D K + Y+
Sbjct: 166 FNIVINGLCKVGKLN---KAGDIIEDMKVRGVSANVITYNTLIDGYCK--MGKIGKMYKA 220
Query: 70 ----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
K+M A G+ ++ T+ IL+ G C V K+ M +GVKPN V YN+LI+
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC NGKV A +L M +PN +T + L+ +CK + + A L + G P+
Sbjct: 281 LCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
V T +++ C + DA + + M KG P+V TYN
Sbjct: 341 VTTYNILIDAYCKDENMEDAFAL-------------------YRIMLGKGVCPDVSTYNC 381
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI+ C G L++A ++ ++M + + +TY+ LI LC+ G + L++L M +
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEM--CR 439
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+G K YN+++ G +E AL QMEK+ ++ I GFC +ED
Sbjct: 440 KGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLED 499
Query: 360 AKRCFDQMIEEGGVPNVVIYD 380
A ++M+E+G +PN + Y+
Sbjct: 500 ANGLLNEMLEKGLIPNRMTYE 520
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 143/334 (42%), Gaps = 58/334 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ T+I G + I + KA ++ + P+ FN ++D K+ A
Sbjct: 201 YNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFA 260
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M GV+ + TY L+ GLC +V + L M + +KPN + +N L++ CKN
Sbjct: 261 EMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNK 320
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV---- 182
V +A L DM + PN T++ILI AYCK+EN+ +A L G PDV
Sbjct: 321 MVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYN 380
Query: 183 -------------------------------VTITKVLELLCSVGRVMDAVEILEESGEQ 211
+T +++ LC+ G + A+ +L+E +
Sbjct: 381 CLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK 440
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + G ++ +ME+ G L NV TYN+LI +C+ L+ A
Sbjct: 441 GLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDA 500
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ N+M G+ N +TY+ + + G + D
Sbjct: 501 NGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 205/435 (47%), Gaps = 28/435 (6%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
++ +A +++ S + D + Y ++ G C N++ ++L+ MK+RG P+ V YN
Sbjct: 128 NIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNI 187
Query: 122 LIHSLCKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I SLC K+G A + L+ D P +T++ILI A E + A+ LLE+ + G
Sbjct: 188 MIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG 247
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
+PD+ T ++ +C G V A E++ +G GK G
Sbjct: 248 LLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGE 307
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ + EM +GC PN TY+ILISS C G +D A+ V M ++ + +YD LI L
Sbjct: 308 KLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 367
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FP 339
C GR+D + I+ M G I YN++L L + ++ALE ++ + P
Sbjct: 368 CKEGRLDLAIGIMDYM--ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 425
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ I G+ A MI +G P+ + Y+ LI C++ V EA L+
Sbjct: 426 NVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLL 485
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+M G+ P ++N VL GLC+ + A+ + E I +G P Y LI+ +
Sbjct: 486 DDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAE---MIEKGCRPNETTYILLIEGI 542
Query: 460 CEKGGFQSASMLLVQ 474
G+++ +M L
Sbjct: 543 -GFAGWRTEAMELAN 556
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 237/500 (47%), Gaps = 49/500 (9%)
Query: 77 VQGDDYTYAILMKGL---CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+Q D+ LMK L C + + L + ++G P+ ++ LI +
Sbjct: 71 LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIE 130
Query: 134 RARSLMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
+A +M +E EP+ ++ +I +CK + A +L + + GF+PD+VT ++
Sbjct: 131 KASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIG 190
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
LC+ ++ A+ +L++ + C+P V TY ILI + G
Sbjct: 191 SLCNRRKLGLALTVLDQ-------------------LLLDNCMPTVITYTILIEATIVEG 231
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
++ A+ + +M G+ + TY+ +IRG+C G ++ +++ + + +G + +
Sbjct: 232 GINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL--TSKGCEPDVIS 289
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN +L + + DE + + +M P V S+ I C G +++A MI
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E+ P+ YD LI A C+E R+ A +M M +G LP +NT+L+ LC+ GN
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 409
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL++ + +RG+ G P Y+ +I AL G A ++ M+ KGI PD +T+N
Sbjct: 410 QALEIFNK-LRGM--GCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYN 466
Query: 489 SLLICLSQQ-TTWLLLLLLNEM---------VSFVMVVHELSAKEKRCKLRSLNH-LAHG 537
SL+ CL + + LL++M +S+ +V+ L CK+R ++ +
Sbjct: 467 SLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGL------CKVRRIDDAIGMF 520
Query: 538 AGSVWLGLRIHDTTHTFIID 557
A + G R ++TT+ +I+
Sbjct: 521 AEMIEKGCRPNETTYILLIE 540
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 154/312 (49%), Gaps = 25/312 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
IN+ +K + + + P + +N+I+ + KE + A + + G + D +Y I
Sbjct: 233 INEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L++ + +G KL+ M SRG +PN V Y+ LI SLC+ G++ A S++ M E
Sbjct: 293 LLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE 352
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ ++ LI A CKE L A+ +++ S G +PD+V +L LC G A+
Sbjct: 353 LTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQAL 412
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
EI K++G GC PNV +YN +IS+ G AL + M
Sbjct: 413 EI---------FNKLRG----------MGCPPNVSSYNTMISALWSCGDRSRALGMVPAM 453
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
GI + +TY++LI LC G +++ + +L ME S G + + YN VL GL +
Sbjct: 454 ISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQS--GFRPTVISYNIVLLGLCKVR 511
Query: 323 QQDEALEYLKQM 334
+ D+A+ +M
Sbjct: 512 RIDDAIGMFAEM 523
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 33/394 (8%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
G PN +N L++ LCK GKV A+ + ++ +P V+F+ LI YCK NL
Sbjct: 227 GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEG 286
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L F PDV T + +++ LC ++ DA + KE
Sbjct: 287 FRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLF-------------------KE 327
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G +PN T+ LI+ C+ G +D AL+++ M G+ + V Y+TLI GLC GG
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGY 387
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ K + M +K G Y ++L G +E + ALE K+M E + V
Sbjct: 388 FREARKFVGEM--TKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAF 445
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C DG + DA+R +M+ G P+ Y ++ +C++ V+ +L+KEM
Sbjct: 446 TAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQS 505
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G++P T+N +++GLC+QG V A L+ + G +P Y+ L++ C+ G
Sbjct: 506 DGHIPGVITYNVLMNGLCKQGQVKNADMLLNA---MLNLGVVPDDITYNILLQGHCKHGK 562
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
+ +M G++ DY ++ SLL LS+ +
Sbjct: 563 LGDFQNVKTEM---GLVSDYASYRSLLHELSKAS 593
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 195/422 (46%), Gaps = 55/422 (13%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
++D ++ L + N+ +L+ ++K + + +++ SG + YT+ +
Sbjct: 178 VSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNV 237
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
LM LC +V D + ++ G++P +V +NTLI+ CK+G + L MEE
Sbjct: 238 LMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFR 297
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ T+S LI CKE L +A L ++ G VP+ VT T ++ C GRV A+
Sbjct: 298 VFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLAL 357
Query: 203 EILEESGEQGRL-----------GKVKGGC-----RFLKEMERKGCLPNVDTYNILISSY 246
EI ++ +G G KGG +F+ EM ++G +P+ TY L+
Sbjct: 358 EIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGS 417
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G L+ AL++ +M +GI + V + +I GLC G+I D + L+ M + G K
Sbjct: 418 CKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREM--LRAGLKP 475
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y V+ GFC G+V+ + +
Sbjct: 476 DDGTYTMVMD---------------------------------GFCKKGDVKMGFKLLKE 502
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M +G +P V+ Y+ L++ C++ +V+ A L+ M G +P T+N +L G C+ G
Sbjct: 503 MQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGK 562
Query: 427 VG 428
+G
Sbjct: 563 LG 564
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 165/337 (48%), Gaps = 45/337 (13%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F E+ G PNV T+N+L++ C+ G + A +F++++ G+ V+++TLI G C
Sbjct: 219 FYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYC 278
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EK 336
G +++G ++ +ME+ R+ P Y++++ GL +E Q ++A K+M
Sbjct: 279 KSGNLEEGFRLKMVMEEF------RVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
L P V + I G C +G V+ A + QM +G ++V+Y+ LI C+ REA
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREAR 392
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL----------------------- 433
+ + EMT G +P T+ T+L G C++G++ AL++
Sbjct: 393 KFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL 452
Query: 434 --------VEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
E +R + R L P G Y+ ++ C+KG + LL +M G +P
Sbjct: 453 CRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGV 512
Query: 485 LTWNSLLICLSQQ-TTWLLLLLLNEMVSFVMVVHELS 520
+T+N L+ L +Q +LLN M++ +V +++
Sbjct: 513 ITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDIT 549
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 12/323 (3%)
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ-----GRLGKVKGGCRFLKEMERK 230
F F+ T + ++ CS+ + A + +++ R GK F +E K
Sbjct: 97 FDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASILETK 156
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G L + ++ L+S Y E G + A+ F K + F L+ +
Sbjct: 157 GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVA 216
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
L+ + DS G + +N ++ L +E + +A ++ K L P AV + I
Sbjct: 217 LEFYLEILDS--GYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLI 274
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G+C GN+E+ R M E P+V Y LI C+E ++ +A+ L KEM G +
Sbjct: 275 NGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLV 334
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P TF T+++G C+ G V AL++ ++ +G Y+ LI LC+ G F+ A
Sbjct: 335 PNDVTFTTLINGQCKNGRVDLALEIYQQ---MFTKGLKADLVLYNTLIDGLCKGGYFREA 391
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
+ +M +G++PD T+ +LL
Sbjct: 392 RKFVGEMTKRGLIPDKFTYTTLL 414
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 232/522 (44%), Gaps = 61/522 (11%)
Query: 6 QSP-PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
+SP P + + + + ++++ V + + + + TPS+ FN IL L+K
Sbjct: 25 RSPMPSSAEPLKTVLSIPNGFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYP 84
Query: 65 RAFYRKKMMAS-GVQGDDYTYAILMK---------------------GLCLTNRVGDGFK 102
M S GV+ D +T +IL+ GLCL +V +
Sbjct: 85 TVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALL 144
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
+ + G N V Y LI+ LCK G+ A ++ +E N V +S +I C
Sbjct: 145 FHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLC 204
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K++ + +A L + P VVT + ++ C VG+ DA
Sbjct: 205 KDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAF---------------- 248
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
R EM K P+ T+NIL+ + C+ G + A +V M +G+ VTY+TL+
Sbjct: 249 ---RLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLM 305
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM 334
G C + +L ++ S+ R++P YN ++ G + DEAL +M
Sbjct: 306 DGYCLVNEVGKAKHVLSII------SRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEM 359
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ P V + I G C G + A D+M ++V Y+ LI +C+ + V
Sbjct: 360 CCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHV 419
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A L+K++ HG P T+N ++ GLC+ G + A + ++ + +G + Y
Sbjct: 420 DKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLI---KGYNVNAWTY 476
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ +I LC++G F A +LL +M GI+PD +T+ +++ L
Sbjct: 477 NIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQAL 518
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 171/344 (49%), Gaps = 26/344 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARAFYRK 70
++ T+I GL + +++ D + + P++ F+S++ +V + D R F
Sbjct: 195 MYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLF--N 252
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ + D YT+ IL+ LC ++ + ++ VM GV+P V YNTL+ C
Sbjct: 253 EMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVN 312
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+VG+A+ ++S + PN +++I+I +CK + + AL L + G P VT
Sbjct: 313 EVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYN 372
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+++ LC GR+ A E+++E + V +K+++
Sbjct: 373 SLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEH 432
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PN+ TYNILI C+ G L +A DVF D+ I G + N TY+ +I GLC G D+
Sbjct: 433 GIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEA 492
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+L MED+ G Y +++ L+ +++ ++A + L++M
Sbjct: 493 EVLLSKMEDN--GIIPDAVTYETIIQALFHKDENEKAQKLLREM 534
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 214/476 (44%), Gaps = 35/476 (7%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P+ +N ++D + DL A + ++ +G++ D T L+K LC NR +
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALF-GCILRTGLKMDQITANTLLKCLCYANRTEEAVN 213
Query: 103 -LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILIC 155
LLH M G PN+V Y+ ++ +LC N RA L+ M + P+ V +S +I
Sbjct: 214 VLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI----LEESGEQ 211
+ E A L + G PDVVT +++ LC R MD E+ + G Q
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK-ARAMDKAELVLRQMTTDGAQ 332
Query: 212 -------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
LG++K + +EM+++G +PN+ T N ++S C+ G A +
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
F+ M G + +Y TL+ G S G D + + M+ + G + +++
Sbjct: 393 FDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSN--GIAANCHVFTILIHAY 450
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ D+A+ +M++ + P V S I F G + DA F+QM+ G PN
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGNVGTALKLVE 435
+Y +I +C + +A EL+ EM G P F++V++ LC+ G V A + +
Sbjct: 511 AVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFD 570
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G PG ++ LI C G A +L M G+ PD +T+N+LL
Sbjct: 571 ---LATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL 623
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 231/541 (42%), Gaps = 76/541 (14%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+ PD + +I G + + K + + + P++ NS L L K A
Sbjct: 331 AQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAA 390
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ M A G + D ++Y L+ G D L + MKS G+ N ++ LIH+
Sbjct: 391 EFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAY 450
Query: 127 CKNGKVGRARSLMSDME---------------------------------------EPND 147
K G V A + ++M+ +PN
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILE 206
+S +I +C LV A L+ + + G PD+V + V+ LC GRVMDA +I +
Sbjct: 511 AVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFD 570
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+ + G ER P V T+N LI YC G +D A + + M++ G
Sbjct: 571 LATDIG---------------ER----PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVG 611
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + VTY+TL+ G GRI+DGL + + M+ ++G K Y +L GL+R +
Sbjct: 612 VEPDIVTYNTLLDGYFKNGRINDGLTLFREMQ--RKGVKPNTVTYGIMLAGLFRAGRTVA 669
Query: 327 ALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI---EEGGVPNV----VIY 379
A K+ ++ ++ I G + G + C D+ I ++ G NV I
Sbjct: 670 A---RKKFHEMIESGTTVTVSIYGIILGGLCRN--NCADEAIILFQKLGTMNVKFSITIL 724
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ +I+A + +R EA EL ++ G LP ST+ ++ L + G V A + +
Sbjct: 725 NTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEK 784
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
G +PGS + +I+ L EKG A L ++ GK IL + T + +L S++
Sbjct: 785 S---GIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGK 841
Query: 500 W 500
+
Sbjct: 842 Y 842
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 202/449 (44%), Gaps = 25/449 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T++ G D++ + + + + +F ++ K +
Sbjct: 403 PDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLI 462
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M GV D TY+ ++ R+ D + + M +RG++PN+ +Y+++I C
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCM 522
Query: 129 NGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G + +A+ L+S+M P+ V FS +I + CK+ +++A + + + G P V+
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVI 582
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ C VG++ A +IL+ G + G++ G +EM
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+RKG PN TY I+++ G +A F++M G + Y ++ GLC
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D+ + + Q + K I+ N+++ +Y+ +++EA E + L P
Sbjct: 703 DEAIILFQKL--GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I+ DG VEDA F M + G VP + + +I ++ + +A + ++ G
Sbjct: 761 VMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGK 820
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLV 434
L AST + +LS R+G +KL+
Sbjct: 821 RILLEASTTSLMLSLFSRKGKYQEDIKLL 849
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 20/316 (6%)
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
CR +E + +P TYNIL+ C D L +F + G+ + +T +TL++
Sbjct: 144 CR--EEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKC 201
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---- 336
LC R ++ + +L L S+ G Y+ VL L + AL+ L+ M K
Sbjct: 202 LCYANRTEEAVNVL-LHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGA 260
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V S I GF +G A F +M +G P+VV Y+ +I A C+ + +A
Sbjct: 261 CSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAE 320
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
++++MT G P T++ ++ G G + A K+ E + RG +P + +
Sbjct: 321 LVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKK---RGLIPNIVTCNSFL 377
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS---- 511
+LC+ G + A+ M KG PD ++ +LL + + + ++ L N M S
Sbjct: 378 ASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIA 437
Query: 512 -----FVMVVHELSAK 522
F +++H + +
Sbjct: 438 ANCHVFTILIHAYAKR 453
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/484 (25%), Positives = 209/484 (43%), Gaps = 70/484 (14%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
++ R F +M +GV D Y YA ++GLC NR G+ +L ++R + Y
Sbjct: 243 NVVRVF--DEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTA 300
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I C K+ A S+ +ME+ P+ + L+ YC N AL + + S G
Sbjct: 301 VIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRG 360
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
+ V + +L L +GR ++ V++ EE E G +LGKV
Sbjct: 361 IKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAV 420
Query: 222 RFL-----------------------------------KEMERKGCLPNVDTYNILISSY 246
L KEME +G P+V YN+L + +
Sbjct: 421 GMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGF 480
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
A+D+ N M+ G+ N T+ +I GLCS G++++ + ++ E +
Sbjct: 481 FRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKG--ESVEI 538
Query: 307 RISPYNSVLYG------LYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVE 358
+ Y +++ G + + ++ EA L+ M ++ P V S C +GN+E
Sbjct: 539 SVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNME 598
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A F+ I G P+ V Y +I+ YC+ + EA EL K+M G P A T+ ++
Sbjct: 599 GAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMI 658
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+G C+ + A +L +DM+ RG P Y+ +IK L G + A L +M+
Sbjct: 659 NGYCKMNCLREAHELF-KDMK--ERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDM 715
Query: 479 GILP 482
G+ P
Sbjct: 716 GMTP 719
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 186/453 (41%), Gaps = 39/453 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
T+ IL K N + +K++ G N Y ++I LC + SL D
Sbjct: 61 TFKILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLD 120
Query: 142 M--EEPNDVTFSI--LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE----LLC 193
+ D F I L + + N VN L +F+ GFV V+ +E LL
Sbjct: 121 IIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNAFN-GFVKACVSQNMFVEAIDFLLQ 179
Query: 194 SVGRVMDAVEILEESGEQGRLGKVK----GGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ V+ IL + RL K C F++ + G + N TY I+I + C+
Sbjct: 180 TRKNVVILPNILSFNFLINRLVKHDEVDMALCLFVR-FKSFGLIFNEYTYTIVIKALCKK 238
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G ++ + VF++MK G+ + Y T I GLC R D G +LQ + +
Sbjct: 239 GDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQ--DYRTRNAHVHKY 296
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
Y +V+ G E + DEA +MEK L P + G+C N + A + M
Sbjct: 297 AYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSM 356
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
I G N VI+ C++H + R E ++ +E G +N + LC+ G V
Sbjct: 357 ISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKV 416
Query: 428 GTALKLVEE--------DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
A+ +++E DM+ HY+ LI +G A L +M +G
Sbjct: 417 DDAVGMLDELKSMQLDVDMK-----------HYTTLINGYFLQGKPIEAQSLFKEMEERG 465
Query: 480 ILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS 511
PD + +N L +T + + LLN M S
Sbjct: 466 FKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMES 498
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 173/422 (40%), Gaps = 45/422 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVK-----EDID 62
PD ++ ++ G +R + + ++SR + + IF+ IL L + E +D
Sbjct: 328 PDVYVYCALVHGYCNSRNFDKALAVYKSMISR-GIKTNCVIFSCILHCLDEMGRALEVVD 386
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ F SG+ D Y IL LC +V D +L +KS + + Y TL
Sbjct: 387 MFEEF-----KESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTL 441
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I+ GK A+SL +MEE P+ V +++L + + A+ LL S G
Sbjct: 442 INGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGV 501
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+ T ++E LCS G+V +A E F ++ + +V+
Sbjct: 502 EPNSTTHKIIIEGLCSAGKVEEAEE-------------------FFNWLKGESVEISVEI 542
Query: 239 YNILISSYCETGVLD------SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
Y L++ YCE +++ A + M + + V Y + LC G ++
Sbjct: 543 YTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHT 602
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+ L + G Y ++ G + N EA E K M++ + P AV ++ I G
Sbjct: 603 LFNLFIHT--GFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMING 660
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+C + +A F M E G P+V+ Y +I A +L EM G P
Sbjct: 661 YCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDMGMTPG 720
Query: 411 AS 412
A+
Sbjct: 721 AT 722
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/492 (28%), Positives = 223/492 (45%), Gaps = 27/492 (5%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
I+D V + + PS+ FN IL +VK K+M G+ T +I
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDM 142
L+ C +G F +L ++ RG + N++ T++ LC NG+V +A S+++
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
++VT+ LI CK A LL K P+VV +++ LC G V +A
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238
Query: 203 EILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ + +G LG+ + R L +M + NV TYNILI +
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G+L A D+ N M G + VT++TL+ G C + + K+ + G
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC--GITP 356
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ YN ++ G + N+ DEAL +M +KL P V S I G C G + A F
Sbjct: 357 DVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELF 416
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ + G PNV+ Y+ ++ A C+ + V +A EL M G P S++N +++G C+
Sbjct: 417 SAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKS 476
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A+ L EE R R +P S Y+ LI LC+ G A L M G D
Sbjct: 477 KRIDEAMNLFEEMHR---RNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDV 533
Query: 485 LTWNSLLICLSQ 496
+T+N L S+
Sbjct: 534 ITYNILFDAFSK 545
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 186/391 (47%), Gaps = 31/391 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
DE + T+I GL + + + + + + P++ I+N I+D L K+ + AR Y
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ D +TY L+ G C + + +LL M R V N YN LI +LCK
Sbjct: 242 -SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCK 300
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +G+A + + M + P+ VTF+ L+ YC ++V A L + G PDV +
Sbjct: 301 KGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWS 360
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C R+ +A+ + +M K PN+ TY+ LI
Sbjct: 361 YNILIIGYCKNNRIDEALSLFN-------------------KMNYKKLAPNIVTYSSLID 401
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C++G + A ++F+ + G S N +TY+ ++ LC +D +++ LM + G
Sbjct: 402 GLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFE--RGL 459
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+S YN ++ G + + DEA+ ++M + L P +V + I G C G + A
Sbjct: 460 TPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWE 519
Query: 363 CFDQMIEEGGVP-NVVIYDCLIHAYCQEERV 392
F+ M +GG P +V+ Y+ L A+ + + V
Sbjct: 520 LFNVM-HDGGPPVDVITYNILFDAFSKIQHV 549
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G + I++ + + ++ + P++ ++S++D L K R Y
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKS----GRISY 411
Query: 69 RKKMMAS----GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
++ ++ G + TY I++ LC V +L ++M RG+ PN YN LI+
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK+ ++ A +L +M P+ VT++ LI CK + +A L G
Sbjct: 472 GYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPV 531
Query: 181 DVVTITKVLELLCSVGRVM 199
DV+T + + + V+
Sbjct: 532 DVITYNILFDAFSKIQHVI 550
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 194/409 (47%), Gaps = 39/409 (9%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSF 174
+ +N ++ LC GK RA L+ M PN VT++ +I +C + AL ++ E
Sbjct: 41 TTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 100
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKV 217
G P+ T V+ C VGRV +AV++ +E +G + GK+
Sbjct: 101 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 160
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M +G V TYN+L+ + G A ++ +M G++ + TY+ L
Sbjct: 161 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 220
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G C G + L+I + M S+ G + + Y S++Y L ++ Q +++ +KL
Sbjct: 221 INGHCKEGNVKKALEIFENM--SRRGVRATVVTYTSLIYALSKKGQ-------VQETDKL 271
Query: 338 FPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
F AV R ++ I GN++ A +M ++ P+ V Y+ L+ C
Sbjct: 272 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 331
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
RV EA +L+ EMT G P T+NT++SG +G+V AL++ E M +G P
Sbjct: 332 LGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM---NKGFNPT 388
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI+ LC+ G A ++ +MV GI PD T+ SL+ L+ +
Sbjct: 389 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 32/385 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY ++ G C RV ++ M+ RG + PN Y T+I CK G+V A + +
Sbjct: 74 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 133
Query: 142 M-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M +P V ++ LI YC + L AL+ ++ G V T ++ L G
Sbjct: 134 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 193
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R +A E++EE G KG P+V TYNILI+ +C+ G + AL
Sbjct: 194 RGTEAYELVEEMGG-------------------KGLAPDVFTYNILINGHCKEGNVKKAL 234
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F +M G+ VTY +LI L G++ + K+ E + G + + YN+++
Sbjct: 235 EIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFD--EAVRRGIRPDLVLYNALIN 292
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D A E + +MEK + P V + + G C+ G V++A++ D+M + G P
Sbjct: 293 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 352
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y+ LI Y + V++A + EM G+ P T+N ++ GLC+ G A +V
Sbjct: 353 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 412
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKAL 459
+E + G P Y LI+ L
Sbjct: 413 KE---MVENGITPDDSTYISLIEGL 434
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 65/407 (15%)
Query: 44 PSLKIFNSILDVL-----VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
P+ +N+++ V+ +D+ R + G+ + YTY ++ G C RV
Sbjct: 70 PNAVTYNTVIAGFCSRGRVQAALDIMREMRER----GGIAPNQYTYGTVISGWCKVGRVD 125
Query: 99 DGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSIL 153
+ K+ M ++G VKP +V+YN LI C GK+ A M E T+++L
Sbjct: 126 EAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLL 185
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG- 212
+ A + A L+E+ G PDV T ++ C G V A+EI E +G
Sbjct: 186 VHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGV 245
Query: 213 ---------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ G+V+ + E R+G P++ YN LI+S+ +G +D A +
Sbjct: 246 RATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFE 305
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ +M+ I+ + VTY+TL+RGLC GR+D+ K++ M +K G + + YN++
Sbjct: 306 IMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEM--TKRGIQPDLVTYNTL--- 360
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
I G+ + G+V+DA R ++M+ +G P ++
Sbjct: 361 ------------------------------ISGYSMKGDVKDALRIRNEMMNKGFNPTLL 390
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
Y+ LI C+ + +A ++KEM +G P ST+ +++ GL +
Sbjct: 391 TYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 166/339 (48%), Gaps = 27/339 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
P++ + TVI G + +++ VK D ++++ + P ++N+++ + +D A
Sbjct: 106 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTA-L 164
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
YR +M+ GV TY +L+ L + R + ++L+ M +G+ P+ YN LI+
Sbjct: 165 LYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGH 224
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G V +A + +M VT++ LI A K+ + L +++ G PD+
Sbjct: 225 CKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDL 284
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGR-----------------LGKVKGGCRFLK 225
V ++ + G + A EI+ E E+ R LG+V + +
Sbjct: 285 VLYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID 343
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM ++G P++ TYN LIS Y G + AL + N+M G + +TY+ LI+GLC G
Sbjct: 344 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 403
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
+ DD +++ M ++ G S Y S++ GL E+++
Sbjct: 404 QGDDAENMVKEMVEN--GITPDDSTYISLIEGLTTEDER 440
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 139/513 (27%), Positives = 236/513 (46%), Gaps = 39/513 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSR-FNMTPSLKIF--NSILDVLVKE-D 60
++ PP+ ++ L R R +++L R F P+ +F N ++D L KE D
Sbjct: 157 LRVPPNTRTCNHILLCLARER-------SSELAWRLFEQLPAPNVFTFNIMIDFLCKEGD 209
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ ARA +M A G D TY L+ G + + KL+ M+ G +P+ V YN
Sbjct: 210 LAEARALL-ARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYN 268
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
L++ CK G++ RA S ++M+ N VTFS + A+CK + A+ L +
Sbjct: 269 ALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMK 328
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
G P+ VT T +++ C GR+ DA+ + E +QG + GKV
Sbjct: 329 GMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEA 388
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ MER G N Y LI + + AL + ++MK G+ + Y LI G
Sbjct: 389 EDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWG 448
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
LC+ ++D+ +L M++ G K Y +++ ++ ++ EA+ L++M
Sbjct: 449 LCNLQKLDEAKSLLNKMDEC--GLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFR 506
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + G C G++++A F++M++ G PNV Y L+ C+ R+ +A L
Sbjct: 507 PNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLL 566
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ EM G +++ G +QGN+ A L + + + L G Y+ +
Sbjct: 567 LDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYG---YTCFVWG 623
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C Q A +L +M+ GI PD + +N L+
Sbjct: 624 FCNLNMIQEAREVLSEMIENGITPDAVVYNCLI 656
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 164/376 (43%), Gaps = 24/376 (6%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
F++ +D K + +M G++ ++ TY L+ G C R+ D L + M
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLV 164
+GV N V Y L+ LCK GKV A + ME N++ ++ LI + +N
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------ 212
AL LL + G DV ++ LC++ ++ +A +L + E G
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM 481
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ K L++M G PN+ TY L+ C+ G +D A+ FN M G+
Sbjct: 482 DACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLE 541
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
N Y L+ GLC GR+D + +L M D + S++ G ++ +A
Sbjct: 542 PNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVC--TSLMDGHLKQGNLQDAF 599
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+M L + + GFC +++A+ +MIE G P+ V+Y+CLI+
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659
Query: 387 CQEERVREASELMKEM 402
+ + EA+ L EM
Sbjct: 660 QKLGNMEEAAILQNEM 675
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 116/258 (44%), Gaps = 23/258 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D S++ +I GL + +++ + + + P+ I+ +I+D K +
Sbjct: 438 DVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALL 497
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+KMM SG + + TY L+ GLC + + + M G++PN Y L+ LCKN
Sbjct: 498 QKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKN 557
Query: 130 GKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G++ +A L+ +M + ++V + L+ + K+ NL +A L K + G D+
Sbjct: 558 GRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGY 617
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T + C++ + +A E+ L EM G P+ YN LI+
Sbjct: 618 TCFVWGFCNLNMIQEAREV-------------------LSEMIENGITPDAVVYNCLINK 658
Query: 246 YCETGVLDSALDVFNDMK 263
+ G ++ A + N+M+
Sbjct: 659 CQKLGNMEEAAILQNEME 676
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 209/438 (47%), Gaps = 28/438 (6%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
VQ + YTY L+ LC +V D +L M RG P+ V YN L+ + CK +A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L+ M PN+VT+++L+ C E ++ +AL LL S G P V VL+ L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
CS R DA E++ E + R G ++ + L++M + GC N+
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN +I+ CE +D A+ + + MK G + VTY+TL++GLCS R D +++
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M ++ G +N+++ L ++ +A+E KQM + P ++ S I G
Sbjct: 243 M--TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
++ A F++M +G P+ IY L ++ + EA + ++++ G P +
Sbjct: 301 TKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 359
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +L GLCR G A+ ++ + G +P Y LI+ L +G A LL++
Sbjct: 360 NAILLGLCRNGKTEFAIDIMA---YMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIK 416
Query: 475 MVGKGILPDYLTWNSLLI 492
+ + +L + L + L+
Sbjct: 417 LCSRDVLVNSLIKSEALL 434
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 209/441 (47%), Gaps = 46/441 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--------ED 60
P+ + +I L + D + D + P + +N +L+ K E
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDL RA G ++ TY +LM G+C V D +LL + S G KP++V YN
Sbjct: 65 IDLMRA--------EGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYN 116
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T++ LC + G A L+++M PN+ TF+++I + C++ L A+ LLEK
Sbjct: 117 TVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKH 176
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G ++VT ++ LC E+ G +G L +M+ GC P++
Sbjct: 177 GCTANIVTYNAIINGLC------------EQRNVDGAMG-------LLSKMKSYGCKPDI 217
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN L+ C A ++ ++M +G + VT++TLI LC G + D +++ +
Sbjct: 218 VTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQ 277
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCV-- 353
M D +G Y++++ GL + + D+ALE +M K F D+ ++L C+
Sbjct: 278 MPD--KGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF--NPDKIYQLLAECLND 333
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D +E+A + ++ + G P+ V+Y+ ++ C+ + A ++M M G +P T
Sbjct: 334 DDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLT 393
Query: 414 FNTVLSGLCRQGNVGTALKLV 434
+ ++ GL +G + A +L+
Sbjct: 394 YVILIEGLAYEGYLNEARELL 414
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 167/333 (50%), Gaps = 27/333 (8%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+ T ++ LC G+V DA+ +L++ M +GC P+V TY
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDD-------------------MLCRGCAPDVVTY 45
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
NIL+ + C+ A+++ + M+ +G + N VTY+ L+ G+C G +DD L++L+ +
Sbjct: 46 NILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL-- 103
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
G K YN+VL GL + +A E + +M E P ++ I C G +
Sbjct: 104 PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 163
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A + ++M + G N+V Y+ +I+ C++ V A L+ +M +G P T+NT+
Sbjct: 164 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTL 223
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
L GLC A +L++ + G LP + ++ LI LC+KG A + QM
Sbjct: 224 LKGLCSAARWVDAEELMDNMTQ---NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPD 280
Query: 478 KGILPDYLTWNSLLICLSQQTTW-LLLLLLNEM 509
KG P+ +T+++++ L++ T L L NEM
Sbjct: 281 KGCTPNSITYSTIISGLAKATKLDQALELFNEM 313
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 198/437 (45%), Gaps = 32/437 (7%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
+ S P SI F ++ + + + V+ + + + P L N ++ +
Sbjct: 75 VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQP 134
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ + KMM G + D T+ L+ G C NR+ D L + G KPN V Y TL
Sbjct: 135 CRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTL 194
Query: 123 IHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I LCKN + A L + M PN VT++ L+ C+ +A LL
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 179 VPDVVTITKVLELLCSVGRVMDAVE---------ILEESGEQGRLGKVKGGCRF--LKE- 226
P+V+T T +++ VG++M+A E + + G L + G C + L E
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL--INGLCMYGLLDEA 312
Query: 227 ------MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
MER GC PN Y LI +C++ ++ + +F +M G+ N +TY LI+G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKL 337
C GR D ++ M S + I YN +L GL + ++AL EY+++ E +
Sbjct: 373 YCLVGRPDVAQEVFNQM--SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE-M 429
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
V ++ I G C G VEDA F + +G PNV+ Y +I +C+ + EA
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 398 LMKEMTGHGYLPIASTF 414
L K+M G+LP S +
Sbjct: 490 LFKKMKEDGFLPNESVY 506
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 180/403 (44%), Gaps = 30/403 (7%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTF 150
NR L M+ G+ P N ++H +C + + RA + M EP+ VTF
Sbjct: 97 NRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTF 156
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ YC + +A+ L ++ GF P+VVT T ++ LC + AVE+ + G
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G PNV TYN L++ CE G A + DM I N
Sbjct: 217 NGSR-------------------PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
+T+ LI G++ + ++ +M + + Y S++ GL DEA +
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVM--IQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
ME+ +P V + I GFC VED + F +M ++G V N + Y LI YC
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
R A E+ +M+ P T+N +L GLC G V AL ++ E MR R
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL-MIFEYMR--KREMDIN 432
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +I+ +C+ G + A L + KG+ P+ +T+ +++
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 7/196 (3%)
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK-RCF 364
S Y +L Q ++AL+ +M + P +D + ++L N D F
Sbjct: 48 FSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFT-RLLSVIAKMNRYDVVISLF 106
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+QM G P + + ++H C + AS + +M G+ P TF ++L+G C
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A+ L ++ + G G P Y+ LI+ LC+ A L QM G P+
Sbjct: 167 NRIEDAIALFDQIL---GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 485 LTWNSLLICLSQQTTW 500
+T+N+L+ L + W
Sbjct: 224 VTYNALVTGLCEIGRW 239
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 181/385 (47%), Gaps = 32/385 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY ++ G C RV ++ M+ RG + PN Y T+I CK G+V A + +
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580
Query: 142 M-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M +P V ++ LI YC + L AL+ ++ G V T ++ L G
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 640
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R +A E++EE G KG P+V TYNILI+ +C+ G + AL
Sbjct: 641 RGTEAYELVEEMGG-------------------KGLAPDVFTYNILINGHCKEGNVKKAL 681
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F +M G+ VTY LI L G++ + K+ E + G + + YN+++
Sbjct: 682 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD--EAVRRGIRPDLVLYNALIN 739
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D A E + +MEK + P V + + G C+ G V++A++ D+M E G P
Sbjct: 740 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 799
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y+ LI Y + V++A + EM G+ P T+N ++ GLC+ G A +V
Sbjct: 800 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 859
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKAL 459
+E + G P Y LI+ L
Sbjct: 860 KE---MVENGITPDDSTYISLIEGL 881
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 194/409 (47%), Gaps = 39/409 (9%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSF 174
+ +N ++ LC GK RA L+ M PN VT++ +I +C + AL ++ E
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 547
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKV 217
G P+ T V+ C VGRV +AV++ +E +G + GK+
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M +G V TYN+L+ + G A ++ +M G++ + TY+ L
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 667
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G C G + L+I + M S+ G + + Y +++Y L ++ Q +++ +KL
Sbjct: 668 INGHCKEGNVKKALEIFENM--SRRGVRATVVTYTALIYALSKKGQ-------VQETDKL 718
Query: 338 FPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
F AV R ++ I GN++ A +M ++ P+ V Y+ L+ C
Sbjct: 719 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 778
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
RV EA +L+ EMT G P T+NT++SG +G+V AL++ E M +G P
Sbjct: 779 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM---NKGFNPT 835
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI+ LC+ G A ++ +MV GI PD T+ SL+ L+ +
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 60/389 (15%)
Query: 57 VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPN 115
V+ +D+ R + G+ + YTY ++ G C RV + K+ M ++G VKP
Sbjct: 535 VQAALDIMREMRER----GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 590
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLE 171
+V+YN LI C GK+ A M E T+++L+ A + A L+E
Sbjct: 591 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 650
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLG 215
+ G PDV T ++ C G V A+EI E +G + G
Sbjct: 651 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 710
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
+V+ + E R+G P++ YN LI+S+ +G +D A ++ +M+ I+ + VTY+
Sbjct: 711 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 770
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
TL+RGLC GR+D+ K++ M ++ G + + YN++
Sbjct: 771 TLMRGLCLLGRVDEARKLIDEM--TERGIQPDLVTYNTL--------------------- 807
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
I G+ + G+V+DA R ++M+ +G P ++ Y+ LI C+ + +A
Sbjct: 808 ------------ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 855
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++KEM +G P ST+ +++ GL +
Sbjct: 856 ENMVKEMVENGITPDDSTYISLIEGLTTE 884
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 25/338 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P++ + TVI G + +++ VK D ++++ + P ++N+++ +
Sbjct: 553 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 612
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR +M+ GV TY +L+ L + R + ++L+ M +G+ P+ YN LI+ C
Sbjct: 613 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 672
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +A + +M VT++ LI A K+ + L +++ G PD+V
Sbjct: 673 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 732
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGR-----------------LGKVKGGCRFLKE 226
++ + G + A EI+ E E+ R LG+V + + E
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 791
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G P++ TYN LIS Y G + AL + N+M G + +TY+ LI+GLC G+
Sbjct: 792 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 851
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
DD +++ M ++ G S Y S++ GL E+++
Sbjct: 852 GDDAENMVKEMVEN--GITPDDSTYISLIEGLTTEDER 887
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 236/518 (45%), Gaps = 43/518 (8%)
Query: 3 HSIQSPPDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE 59
H IQS +++ F+ +R G+ + I++ + +++ N PS+ F +L +VK
Sbjct: 29 HEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKM 88
Query: 60 DIDLARAFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
K+M +S G++ D + +++ LC V GF +L M G++P+ V
Sbjct: 89 KHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVT 148
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEEP---NDV-TFSILICAYCKEENLVNALVLLEKSF 174
+ LI+ LC G VGRA L+ +E+ +DV T+ +LI CK A+ L K
Sbjct: 149 FTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKME 208
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEI-LEESGE-------------QG--RLGKVK 218
+ P+VV + V++ LC G V +A+ + LE SG+ QG G+ K
Sbjct: 209 ERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWK 268
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
L EM + G +P++ + NIL+ C+ G + A V M + G + TY++LI
Sbjct: 269 EAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLI 328
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL- 337
C ++D+ ++ +LM G I Y S+++G + ++A+ L +M K+
Sbjct: 329 DRYCLQNQMDEATRVFELM--VSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386
Query: 338 -FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V + I GFC G AK F M + G VPN+ ++ C+ + + EA
Sbjct: 387 FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEAL 446
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG------ 450
L M ++ +L G+C G + TAL+L LP G
Sbjct: 447 SLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFS---------CLPAKGLQINVY 497
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
Y+ +I ++G A LL M G +PD T+N
Sbjct: 498 AYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYN 535
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 186/430 (43%), Gaps = 27/430 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I GL + V+ D V + +K + +++ L K +
Sbjct: 144 PSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGW 203
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM + Y+ +M GLC V + L M +G+KPN V Y LI LC
Sbjct: 204 LRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCN 263
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ A SL+ +M + P+ + +IL+ CKE ++ A ++ G VPDV T
Sbjct: 264 FGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFT 323
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C ++ +A + E M +GCLP++ Y LI
Sbjct: 324 YNSLIDRYCLQNQMDEATRVFE-------------------LMVSRGCLPDIVAYTSLIH 364
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ ++ A+ + ++M G + + VT+ TLI G C GR ++ M K G
Sbjct: 365 GWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH--KYGQ 422
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ +L GL + EAL MEK L V S+ + G C G + A
Sbjct: 423 VPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALE 482
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F + +G NV Y +I+ + ++ + +A +L+ M +G +P + T+N + GL
Sbjct: 483 LFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLV 542
Query: 423 RQGNVGTALK 432
+ + ++K
Sbjct: 543 AEREIARSIK 552
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 201/477 (42%), Gaps = 57/477 (11%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKE 59
M S+ PD I VI L +++ + + + PS+ F +++ L VK
Sbjct: 101 MHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKG 160
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+ A + +G + D TY +L+ GLC + + L M+ R PN V+Y
Sbjct: 161 DVGRAVELV-DHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVY 219
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
+T++ LCK+G V A L +M +PN VT++ LI C A LL++
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKG 219
G +PD+ ++ ++++LC G++M A ++ G + ++
Sbjct: 280 MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE 339
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
R + M +GCLP++ Y LI +C+ ++ A+ + ++M G + + VT+ TLI
Sbjct: 340 ATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIG 399
Query: 280 GLCSGGR-------------------------IDDGLKILQLMEDS--------KEGSKG 306
G C GR I DGL QL+ ++ K
Sbjct: 400 GFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDL 459
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I Y+ +L G+ + + ALE + + L ++ I GF G ++ A+
Sbjct: 460 NIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLL 519
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
M E G +P+ Y+ + E + + + + M G+ A+T +++ L
Sbjct: 520 SNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 34/387 (8%)
Query: 115 NSVIYNTLIHSLCKNGK---VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNAL 167
N + + + CK+GK + A + M + P+ + F++L+ K ++ A+
Sbjct: 36 NKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAI 95
Query: 168 VLL-EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L+ E S G PD + V+ LC L V G L
Sbjct: 96 SLVKEMHSSLGIKPDTFILNVVINSLC-------------------HLKLVAFGFSVLGT 136
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M + G P+V T+ ILI+ C G + A+++ + ++ G + TY LI GLC G+
Sbjct: 137 MLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGK 196
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+ + L+ ME+ + Y++V+ GL ++ EAL +M + + P V
Sbjct: 197 TSEAVGWLRKMEERNWNP--NVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTY 254
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C G ++A D+M++ G +P++ + L+ C+E ++ +A ++ M
Sbjct: 255 TCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMIL 314
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G +P T+N+++ C Q + A ++ E + RG LP Y+ LI C+
Sbjct: 315 VGEVPDVFTYNSLIDRYCLQNQMDEATRVFE---LMVSRGCLPDIVAYTSLIHGWCKIKN 371
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A LL +M+ G PD +TW +L+
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLI 398
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 39/289 (13%)
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-GIS 268
+ G+L + F M + LP+V + +L+ + +A+ + +M GI
Sbjct: 49 KSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIK 108
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ + +I LC + G +L M K G
Sbjct: 109 PDTFILNVVINSLCHLKLVAFGFSVLGTM--LKLG------------------------- 141
Query: 329 EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L P V ++ I G CV G+V A D + + G +V Y LI+ C+
Sbjct: 142 --------LEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCK 193
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ EA +++M + P ++TV+ GLC+ G V AL L E G+G P
Sbjct: 194 MGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMS---GKGIKPN 250
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI+ LC G ++ A LL +M+ G++PD + N L+ L ++
Sbjct: 251 LVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKE 299
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 204/443 (46%), Gaps = 31/443 (6%)
Query: 47 KIFNSILDV-LVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH 105
+I N ++DV L +D A + +M+ V D +Y +++ G C R+ D + L
Sbjct: 194 RILNFVIDVALALGFVDYAEKVF-DEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLK 252
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEE 161
M RG ++ +I + + G V RA + PN + FS LI CK
Sbjct: 253 DMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIG 312
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC 221
++ A +LE+ G+ P+V T T +++ LC G A +
Sbjct: 313 SIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRL----------------- 355
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
FLK + PNV TY +I+ YC+ L+ A + MK G+ N TY LI G
Sbjct: 356 -FLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGH 414
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
C G +++ LM KEG I YN+++ GL ++ + EA + L++ K L
Sbjct: 415 CKAGNFGRAYELMDLM--GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHA 472
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
V ++ I FC + + A F +M + G P++ Y+ LI +C++++V E+ +L
Sbjct: 473 DKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLF 532
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+E G G LP T+ +++ G CR G++ +A+K + MR G P S Y LI L
Sbjct: 533 EEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHK-MRDY--GCKPDSITYGALISGL 589
Query: 460 CEKGGFQSASMLLVQMVGKGILP 482
C + A L M+ G+ P
Sbjct: 590 CNESKLDEACQLYETMIDNGLSP 612
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 136/522 (26%), Positives = 230/522 (44%), Gaps = 58/522 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVK---EDIDLA 64
PD + + ++ G R I+DV + D++ R + N+ +++ E +
Sbjct: 226 PDSTSYKLMVVGYCRMGRISDVDRWLKDMIER-----GYAVDNATCTLMISTFSEKGFVN 280
Query: 65 RAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
RAF Y KK + G+ + ++ L+ GLC + F++L M +G KPN + LI
Sbjct: 281 RAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALI 340
Query: 124 HSLCKNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LCK G +A L SD +PN T++ +I YCKEE L A +LL + G
Sbjct: 341 DGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGL 400
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+ T T +++ C G A E+++ G++ G PN+ T
Sbjct: 401 VPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKE-------------------GFTPNIFT 441
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN +I C+ G A + G+ + VTY LI C L I M
Sbjct: 442 YNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRM- 500
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL---------KIL 349
K G + + YN ++ R+ + +E+ EKLF AV L I
Sbjct: 501 -FKVGLQPDMHTYNVLIATFCRQKKVEES-------EKLFEEAVGLGLLPTKETYTSMIC 552
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G+C DG++ A + F +M + G P+ + Y LI C E ++ EA +L + M +G P
Sbjct: 553 GYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSP 612
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T T+ C+QG+ TA+ ++E + + ++ + LI+ LC + A+
Sbjct: 613 CEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTV------NTLIRKLCSEKKVGVAA 666
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
+ +++ K + D +T + + + L+ L+E +S
Sbjct: 667 LFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSDLSERIS 708
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 39/321 (12%)
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
+GK+K + EM+ G + N +I G +D A VF++M + + +
Sbjct: 171 IGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTS 230
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMED-----------------SKEGSKGR--------- 307
Y ++ G C GRI D + L+ M + S++G R
Sbjct: 231 YKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWV 290
Query: 308 ---ISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
++P ++S++ GL + +A E L++M + P + I G C G E
Sbjct: 291 QMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTE 350
Query: 359 DAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
A R F +++ PNV Y C+I+ YC+EE++ A L+ M G +P +T+ +
Sbjct: 351 KAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCL 410
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G C+ GN G A +L+ D+ G G P Y+ +I LC+KG F A LL + +
Sbjct: 411 IDGHCKAGNFGRAYELM--DLMG-KEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLK 467
Query: 478 KGILPDYLTWNSLLICLSQQT 498
G+ D +T+ L+ +QT
Sbjct: 468 SGLHADKVTYTILISEFCRQT 488
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 20/191 (10%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+ C++ ++ + +++EA ++ EM HG + A N V+ G V A K+ +E
Sbjct: 160 VMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDE- 218
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ R +P S Y ++ C G L M+ +G D T ++ S++
Sbjct: 219 --MLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEK 276
Query: 498 ----------TTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGS-VWLGLR 546
W+ + L +++F +++ L CK+ S+ V G +
Sbjct: 277 GFVNRAFWYFKKWVQMGLNPNLINFSSLINGL------CKIGSIKQAFEMLEEMVRKGWK 330
Query: 547 IHDTTHTFIID 557
+ THT +ID
Sbjct: 331 PNVYTHTALID 341
>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 191/405 (47%), Gaps = 29/405 (7%)
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVT 149
LC NRVG K+L M +G P+ V Y T++ LCK ++ A +++ M P +
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-PVAAS 203
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ ++ A C+E + ++ G P+V+T T +++ C
Sbjct: 204 YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFC---------------- 247
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+ G+++ C L M GC PNV T+ L+ + G + ALD++ M +G +
Sbjct: 248 ---KAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAP 304
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ V+Y+ LIRGLCS G + IL ME + G + Y++++ G + A+
Sbjct: 305 STVSYNILIRGLCSVGDLKGASSILNSME--QHGCFPNVRTYSTLIDGFSKAGDLGGAIS 362
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
M + P V + + FC AK D+M+ E PN V ++ LI + C
Sbjct: 363 IWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLC 422
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSL 446
RV A + EM HG +P T+N ++ GL R+GN G AL +V E GI +
Sbjct: 423 DCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLV 482
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ ++ LC+ + A + + +M+ +GI P+ T+++++
Sbjct: 483 T----YNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAII 523
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 200/444 (45%), Gaps = 34/444 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G DD TYA ++ LC +R+ + ++L M P + YN ++ +LC+
Sbjct: 161 EMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREF 215
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ S++SDM +PN +T++ ++ A+CK L A +L + G P+VVT T
Sbjct: 216 RMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFT 275
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ L GRV DA+++ +G +G +KG L ME+
Sbjct: 276 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 335
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC PNV TY+ LI + + G L A+ ++NDM G N V Y ++ C +
Sbjct: 336 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 395
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
++ M E +N+++ L + AL +M + P + I
Sbjct: 396 KSLIDKM--LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 453
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G +GN DA +M G ++V Y+ ++ CQ REA + +M G
Sbjct: 454 HGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQ 513
Query: 409 PIASTFNTVLSGLCRQGNVG-TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P A TF+ ++ C++G V A L ++ R L Y+ L+ LC +
Sbjct: 514 PNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILV----YTILMAELCNQDKLVD 569
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L++M+ +GI P+ +TWN L+
Sbjct: 570 AMTYLLKMLYEGIYPNTVTWNVLV 593
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 197/425 (46%), Gaps = 31/425 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
PP + + ++ L R + +V +D+V R + P++ + +I+D K ++ +A
Sbjct: 198 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGR-GLQPNVITYTTIVDAFCKAGELRMAC 256
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A +M+ +G + T+ L++GL RV D + M + G P++V YN LI
Sbjct: 257 AIL-ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRG 315
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC G + A S+++ ME+ PN T+S LI + K +L A+ + G P+
Sbjct: 316 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPN 375
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VV T ++++ C A +++ +M + C PN T+N
Sbjct: 376 VVVYTNMVDVFCKKLMFNQAKSLID-------------------KMLLENCPPNTVTFNT 416
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI S C+ + AL VF++M+ G N TY+ LI GL G D L ++ M+
Sbjct: 417 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQ--S 474
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
G + + YN+V+ GL + EA+ ++ +M + + P A S I +C +G V
Sbjct: 475 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRM 534
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M N+++Y L+ C ++++ +A + +M G P T+N ++
Sbjct: 535 AAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVR 594
Query: 420 GLCRQ 424
G+ R
Sbjct: 595 GVFRN 599
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 158/354 (44%), Gaps = 18/354 (5%)
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL- 214
A C+ + A +L++ G PD VT ++ +LC + R+ +A E+L
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASY 204
Query: 215 -GKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
V CR + +M +G PNV TY ++ ++C+ G L A + M I
Sbjct: 205 NAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVI 264
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + N VT+ L+RGL GR+ D L + + M EG YN ++ GL
Sbjct: 265 TGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM--VAEGWAPSTVSYNILIRGLCSVGDL 322
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
A L ME+ FP S I GF G++ A ++ M G PNVV+Y +
Sbjct: 323 KGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNM 382
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ +C++ +A L+ +M P TFNT++ LC VG AL + E R
Sbjct: 383 VDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR--- 439
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G +P Y+ LI L +G A ++ +M GI +T+N+++ L Q
Sbjct: 440 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ 493
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 199/444 (44%), Gaps = 28/444 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M G+ + TY+IL+ C + + L M ++ YN+LI+ CK
Sbjct: 216 KEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKL 275
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G A+ +M + P VT++ LI YC E A + + + G P+ T
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEMER 229
T ++ LC + +A+ + E E+ + ++G CR L EM
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
KG +P+ TY LIS C G + A + +D+ D N + Y L+ G C GR D
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKD 455
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+ ++M + G + Y ++ G RE+ LK+M L P AV +
Sbjct: 456 AVSACRVMVE--RGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNM 513
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I GN+++A +D M++EG +PNVV Y LI+ C+ + +A L KE
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDV 573
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+ L L R GN+ A++L ++G L + Y+ LI+ C G +
Sbjct: 574 TPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGF----LATTVSYNILIRGFCRLGKIEE 629
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A+ LL M ILPDY+T+++++
Sbjct: 630 ATKLLHGMTDNDILPDYITYSTII 653
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 219/499 (43%), Gaps = 73/499 (14%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
+I R +++ + D +++ ++ ++ +NS+++ K A +Y +M+ G
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG 292
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ TY L+ G C FK+ + M ++G+ PN+ + +I LC+ + A
Sbjct: 293 LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAI 352
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L +M+E P++VT++++I +C+ N+ A LL++ GFVPD T ++ L
Sbjct: 353 RLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGL 412
Query: 193 CSVGRVMDAVEILEE-------------------SGEQGRLGKVKGGCR----------- 222
CSVGRV +A E +++ ++GR CR
Sbjct: 413 CSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDL 472
Query: 223 ---------------------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
LKEM G P+ Y +I + + G L A +++
Sbjct: 473 VCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDI 532
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG---- 317
M +G N VTY LI GLC G +D +L+ SKE ++P N + YG
Sbjct: 533 MVDEGCLPNVVTYTALINGLCKAGLMDKA----ELL--SKETLVSDVTP-NHITYGCFLD 585
Query: 318 -LYRENQQDEALEYLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L R ++A++ M K F V ++ I GFC G +E+A + M + +P+
Sbjct: 586 HLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPD 645
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ Y +I+ C+ ++EA +L M G P ++ ++ G C G + A +L +
Sbjct: 646 YITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRD 705
Query: 436 EDMRGIGRGSLPGSGHYSP 454
E +R RG S H +P
Sbjct: 706 EMIR---RGM--RSNHVTP 719
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/527 (24%), Positives = 209/527 (39%), Gaps = 99/527 (18%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N+ P ++ +++L+ L++ ++++ VQ D Y Y+ +++ LC
Sbjct: 91 NLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKA 150
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKN--------------------------GKVGR 134
+++H M+ K + V+YN LIH LCK+ GK
Sbjct: 151 KEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNE 210
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L +M E N +T+SILI ++C+ + NA+ L+K V ++
Sbjct: 211 AELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN 270
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
C +LG + EM KG P V TY LIS YC G
Sbjct: 271 GYC-------------------KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEG 311
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
A V+N+M GIS N T+ +I GLC + + +++ M++ K I P
Sbjct: 312 EWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK------IMP 365
Query: 311 ----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
YN ++ G R EA L +M + P I G C G V +AK
Sbjct: 366 SEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFV 425
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASE--------------------------- 397
D + ++ N + Y L+H YC+E R ++A
Sbjct: 426 DDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTARE 485
Query: 398 --------LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
L+KEM HG P A + ++ + GN+ A L + + G LP
Sbjct: 486 HDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWD---IMVDEGCLPNV 542
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y+ LI LC+ G A +L + + + P+++T+ L L++
Sbjct: 543 VTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTR 589
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 214/503 (42%), Gaps = 51/503 (10%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
FI+++ + R + + +SR N+ PS + +L +L D L M
Sbjct: 40 FISILTSILRGKQSWRIAFNDPFISR-NLKPSH--VDKVLMMLSLNDSRL--------MK 88
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+ + T + L+ GL R D L + S V+P+ IY+ ++ SLC+
Sbjct: 89 DCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFN 148
Query: 134 RARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A+ ++ ME + + V +++LI CK + AL + G +VVT
Sbjct: 149 KAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---- 204
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
GK KEM KG N TY+ILI S+C
Sbjct: 205 ------------------------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRR 240
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G +D+A+ + M I + Y++LI G C G M D +G +
Sbjct: 241 GEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMID--KGLTPTVV 298
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
Y S++ G E + +A + +M + + P + I G C + +A R F +M
Sbjct: 299 TYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEM 358
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
E +P+ V Y+ +I +C+ + EA L+ EM G G++P T+ ++SGLC G V
Sbjct: 359 KERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRV 418
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A + V++ + + + YS L+ C++G F+ A MV +G+ D + +
Sbjct: 419 SEAKEFVDDLHKDHHK---LNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCY 475
Query: 488 NSLLICLSQQ-TTWLLLLLLNEM 509
L+ +++ T L LL EM
Sbjct: 476 AILIDGTAREHDTRALFGLLKEM 498
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 26/285 (9%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ ++ G + D V A ++ + L + ++D +E A K+M
Sbjct: 440 YSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMH 499
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G++ D Y ++ + + F L +M G PN V Y LI+ LCK G +
Sbjct: 500 NHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMD 559
Query: 134 RA-----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
+A +L+SD+ PN +T+ + + N+ A V L + GF+ V+ +
Sbjct: 560 KAELLSKETLVSDV-TPNHITYGCFLDHLTRGGNMEKA-VQLHHAMLKGFLATTVSYNIL 617
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ C RLGK++ + L M LP+ TY+ +I C+
Sbjct: 618 IRGFC-------------------RLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCK 658
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
L A+ +++ M G+ + + Y L+ G C G ++ ++
Sbjct: 659 RSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFEL 703
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD I+ +I +A + + D++ P++ + ++++ L K +
Sbjct: 505 PDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELL 564
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+ + S V + TY + L + +L H M +G +V YN LI C+
Sbjct: 565 SKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAM-LKGFLATTVSYNILIRGFCR 623
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A L+ M + P+ +T+S +I CK NL A+ L G PD +
Sbjct: 624 LGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLA 683
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG 212
+ ++ C G + A E+ +E +G
Sbjct: 684 YSFLVHGCCIAGELEKAFELRDEMIRRG 711
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 187/418 (44%), Gaps = 63/418 (15%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A Q + +Y L+ GLC T KLL +++ R +PN V+Y+ +I LC
Sbjct: 102 FHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLC 161
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A L S+M+ PN +T++ LICA+C L+ A LL + PDV
Sbjct: 162 KDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVY 221
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +++ LC G K + M + G PNV +YNI+I
Sbjct: 222 TFSILIDALCKEG---------------------KNAKQIFHAMVQMGVNPNVYSYNIMI 260
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ +D A+++ +M + + VTY++LI GLC GRI L ++ M G
Sbjct: 261 NGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMH--HRG 318
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y S+L L C + N++ A
Sbjct: 319 QPADVVTYTSLLDAL---------------------------------CKNQNLDKATAL 345
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F +M E G P + Y LI C+ R++ A EL + + G T+ ++SGLC+
Sbjct: 346 FMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCK 405
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+G AL ++ M G +P + + +I++L EK A LL +M+ KG+L
Sbjct: 406 EGMFDEALA-IKSKME--DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 25/261 (9%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
N+ P + F+ ++D L KE + + F+ M+ GV + Y+Y I++ GLC RV +
Sbjct: 215 NINPDVYTFSILIDALCKEGKNAKQIFH--AMVQMGVNPNVYSYNIMINGLCKCKRVDEA 272
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EPND-VTFSILICA 156
LL M + + P++V YN+LI LCK+G++ A +LM++M +P D VT++ L+ A
Sbjct: 273 MNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDA 332
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
CK +NL A L K G P + T T +++ LC GR+ +A E+ +
Sbjct: 333 LCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ---------- 382
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
+ KGC +V TY ++IS C+ G+ D AL + + M+ +G N VT++
Sbjct: 383 ---------HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 433
Query: 277 LIRGLCSGGRIDDGLKILQLM 297
+IR L D K+L M
Sbjct: 434 IIRSLFEKDENDKAEKLLHEM 454
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 147/314 (46%), Gaps = 40/314 (12%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
LG++ L ++ + G PN T+ L+ C G + L + + N V
Sbjct: 57 HLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQV 116
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+Y TL+ GLC G +K+L+++ED ++ + Y++++ GL ++ +EA +
Sbjct: 117 SYGTLLNGLCKTGETRCAIKLLRMIED--RSTRPNVVMYSAIIDGLCKDKLVNEAYDLYS 174
Query: 333 QME--KLFPRAVDRSLKILGFCVDGNV--------------------------------- 357
+M+ ++FP + + I FC+ G +
Sbjct: 175 EMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG 234
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++AK+ F M++ G PNV Y+ +I+ C+ +RV EA L++EM +P T+N++
Sbjct: 235 KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSL 294
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ GLC+ G + +AL L+ E RG Y+ L+ ALC+ A+ L ++M
Sbjct: 295 IDGLCKSGRITSALNLMNEMHH---RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351
Query: 478 KGILPDYLTWNSLL 491
+GI P T+ +L+
Sbjct: 352 RGIQPTMYTYTALI 365
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 4/211 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + + +++ + + NM P +NS++D L K +
Sbjct: 251 PNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNL 310
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D TY L+ LC + L MK RG++P Y LI LCK
Sbjct: 311 MNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCK 370
Query: 129 NGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A+ L + DV T++++I CKE AL + K G +P+ VT
Sbjct: 371 GGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVT 430
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
++ L A ++L E +G LG
Sbjct: 431 FEIIIRSLFEKDENDKAEKLLHEMIAKGLLG 461
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 5/160 (3%)
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + + G C+ G V+ D+++ + N V Y L++ C+ R A +L
Sbjct: 78 PNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKL 137
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIK 457
++ + P ++ ++ GLC+ V A L E D R I P Y+ LI
Sbjct: 138 LRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREI----FPNVITYNTLIC 193
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A C G A LL +M+ K I PD T++ L+ L ++
Sbjct: 194 AFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 39/499 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + TV+ GL R + + D V ++ PS+ FNSI+ K +D+A++F+
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ Y++ IL+ GLCL + + +L M GV+P+SV YN L
Sbjct: 246 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVV 183
G + A ++ DM + P+ +T++IL+C C+ N+ LVLL+ S GF + ++
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC GR+ +A+ + +M+ G P++ Y+I+I
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLF-------------------NQMKADGLSPDLVAYSIVI 405
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G D AL ++++M I N T+ L+ GLC G + + +L + S G
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS--G 463
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN V+ G + +EALE K + + + P + I G+C N+ +A+
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D + G P+VV Y L+ AY + EL +EM G P T++ + GL
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 422 CR---QGNVGTAL--KLVEEDMRGI----GRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
CR N L ++ E+ +G+ G P Y+ +I+ LC A + L
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 473 VQMVGKGILPDYLTWNSLL 491
M + + T+N L+
Sbjct: 644 EIMKSRNLDASSATYNILI 662
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 219/492 (44%), Gaps = 68/492 (13%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQG 79
R RM++D + + N+ S + +NS+L + D D+ + K
Sbjct: 135 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK--------- 185
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+++TY+ ++ GLC ++ D L + + + P+ V +N+++ CK G V A+S
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
++L C G VP V + ++ LC VG +
Sbjct: 246 C----------TVLKC---------------------GLVPSVYSHNILINGLCLVGSIA 274
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A+E+ + + G LG + G +++M KG P+V TY IL+
Sbjct: 275 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 334
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWN-FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ G +D L + DM G N + ++ GLC GRID+ L + M+ +
Sbjct: 335 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK--AD 392
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + Y+ V++GL + + D AL +M +++ P + +LG C G + +A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ D +I G ++V+Y+ +I Y + + EA EL K + G P +TFN+++ G
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 421 LCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C+ N+ A K+++ + G+ P Y+ L+ A G +S L +M +G
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLA----PSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 568
Query: 480 ILPDYLTWNSLL 491
I P +T++ +
Sbjct: 569 IPPTNVTYSVIF 580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYC 247
++ D + +++ E V G CR FL+ E K P+V ++N ++S YC
Sbjct: 174 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G +D A F + G+ + +++ LI GLC G I + L++ + + +K
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL------ASDMNKHG 287
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ P +SV Y + + GF + G + A M
Sbjct: 288 VEP-DSVTYNILAK----------------------------GFHLLGMISGAWEVIRDM 318
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGN 426
+++G P+V+ Y L+ CQ + L+K+M G+ L + +LSGLC+ G
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L + M+ G P YS +I LC+ G F A L +M K ILP+ T
Sbjct: 379 IDEALSLFNQ-MKADGLS--PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 487 WNSLLICLSQQ 497
+LL+ L Q+
Sbjct: 436 HGALLLGLCQK 446
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 153/386 (39%), Gaps = 46/386 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + VI GL + + + D + + P+ + ++L L ++ + L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++SG D Y I++ G + + + +L V+ G+ P+ +N+LI+ CK
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ AR ++ ++ P+ V+++ L+ AY N + L + + G P VT
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ + + LC + + +L E K K G L++ME +G P+ TYN +I
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRER----IFEKCKQG---LRDMESEGIPPDQITYNTIIQ 628
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C L A MK + + TY+ LI LC G I
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-------------- 674
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+S +Y L +N Y + I CV G+ E A + F
Sbjct: 675 -------DSFIYSLQEQNVSLSKFAY--------------TTLIKAHCVKGDPEMAVKLF 713
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEE 390
Q++ G ++ Y +I+ C+
Sbjct: 714 HQLLHRGFNVSIRDYSAVINRLCRRH 739
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 6/161 (3%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARA 66
PPD+ + T+I+ L R + ++ +++ N+ S +N ++D L V I A +
Sbjct: 617 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + V + Y L+K C+ KL H + RG + Y+ +I+ L
Sbjct: 677 FIY-SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 127 CK----NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENL 163
C+ N G++ + + + ++ A C+ L
Sbjct: 736 CRRHLMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTL 776
>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Brachypodium distachyon]
Length = 841
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 142/531 (26%), Positives = 240/531 (45%), Gaps = 73/531 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-----DVLVKEDIDL 63
P S ++R L RA + K ++ PSL IFN+++ LV + L
Sbjct: 173 PSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGL 232
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+R ++ D +Y IL+KG + + GD F+LL M+ G +P V YN L+
Sbjct: 233 LGVMWRFNVIP-----DACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILV 287
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ LC +G + AR L +M E N +TF++L+ Y K + A + + G V
Sbjct: 288 NVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLV 347
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQ--------------GRL---GKVKGGCR 222
PD T + G+ + +E E RL G++ +
Sbjct: 348 PDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWK 407
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+ +G +V +N L+++Y + G + AL+V++ M G+ + T++ LI GLC
Sbjct: 408 LVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLC 467
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
+ GR+DD +L+ M KG + +Y M+ F
Sbjct: 468 NQGRLDDAQLLLEHMI-----CKGYCVGTSFTIY-----------------MDSYF---- 501
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
RS GNVE A +C+D M++ G P+ + + I C+ + V EA + EM
Sbjct: 502 -RS---------GNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEM 551
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
TG G++P T+N+++S CR G V ALKL E+ MR G +P + LI C++
Sbjct: 552 TGRGFVPNNITYNSLISAFCRVGYVSEALKL-EKKMR--QSGLIPDVFTSNILIDGFCKE 608
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVS 511
G + + M G+ PD +T+N+++ C +Q + ++ +N+M++
Sbjct: 609 GRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMS-SAMIFMNKMLA 658
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F I GL R +N+ +A ++ P+ +NS++ +
Sbjct: 523 PDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKL 582
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM SG+ D +T IL+ G C R+ K M + G+ P+ V YNT+I++ C
Sbjct: 583 EKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCG 642
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A M+ M EP+ T++I + + C L A+ +L++ + G +P+ VT
Sbjct: 643 AQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVT 702
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ +CS V+D IL G+L K+ PN T N+ S
Sbjct: 703 YNTLMDGICS--DVLDRAMIL-----TGKLIKM-------------AFQPNTVTVNVFFS 742
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+C+ G AL +K D ++++ T + L
Sbjct: 743 HFCKQGFGKRALVWAEKLKEDSVAFDDATMNIL 775
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
L + F G +A + G P++ L+ + VR A ++ EMT
Sbjct: 145 LALHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTAR 204
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P + FN ++ G C +G V L L+ R +P + Y+ LIK G
Sbjct: 205 GPRPSLAIFNAMILGFCHRGLVHIGLGLLGVMWR---FNVIPDACSYNILIKGYSVFGQA 261
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A LL +M G P +T+N L+
Sbjct: 262 GDAFQLLDEMRESGCQPTVVTYNILV 287
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 219/477 (45%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ D + L+KG C R +
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVDAIIASHLLKGFCEAKRTDEA 167
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ YN L+ SLC GK G+A L+ M E P+ V ++ +
Sbjct: 168 LDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTV 227
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQG 212
I + KE ++ A L ++ G PD+VT + V+ LC R MD E L + +G
Sbjct: 228 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK-ARAMDKAEAFLRQMVNKG 286
Query: 213 RL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
L G+ K R KEM R+ LP+V N L+ S C+ G + A
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEAR 346
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + + +Y ++ G + G + D + LM +G I +N ++
Sbjct: 347 DVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLM--LGDGIAPVICTFNVLIK 404
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D+A+ +M + P V I C G ++DA F+QMI++G VP
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ Y CLI +C + +A EL+ E+ +G F ++++ LC+ G V A +
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + G P + Y+ L+ C G + A + MV GI P+ + + +L+
Sbjct: 525 D---LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/500 (27%), Positives = 228/500 (45%), Gaps = 42/500 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
PD + TVI G + DV KA DL + P L ++S++ L K +D A
Sbjct: 219 PDVVAYNTVIDGFFKE---GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKA 275
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF R+ M+ GV D++TY L+ G T + + ++ M+ + + P+ V NTL+
Sbjct: 276 EAFLRQ-MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMG 334
Query: 125 SLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLCK GK+ AR + M + P+ +++I++ Y + LV+ L + G P
Sbjct: 335 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAP 394
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+ T +++ + G + A+ I EM G P+V TY
Sbjct: 395 VICTFNVLIKAYANCGMLDKAMIIF-------------------NEMRDHGVKPHVVTYM 435
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-ED 299
+I++ C G +D A++ FN M G+ + Y LI+G C+ G + LK +L+ E
Sbjct: 436 TVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL---LKAKELISEI 492
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEY--LKQMEKLFPRAVDRSLKILGFCVDGNV 357
G + I + S++ L + + +A L L P AV ++ + G+C+ G +
Sbjct: 493 MNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKM 552
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A R FD M+ G PNVV Y L++ YC+ R+ E L +EM G P +N +
Sbjct: 553 EKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 418 LSGLCRQG-NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ GL G V +K E GI YS +++ L + F A L ++
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKCT----YSIVLRGLFKNRCFDEAIFLFKELR 668
Query: 477 GKGILPDYLTWNSLLICLSQ 496
+ D +T N+++ + Q
Sbjct: 669 AMNVKIDIITLNTMIAGMFQ 688
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 193/460 (41%), Gaps = 65/460 (14%)
Query: 63 LARAFYRKKMMASGVQGD------DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
LA A + + AS QG YTYAILM +R + G++ ++
Sbjct: 91 LAVALFNRA--ASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA 148
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I + L+ C+ + A +LL ++
Sbjct: 149 IIASHLLKGFCEAKRTDEALD------------------------------ILLHRTPEL 178
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV + +L+ LC+ G+ A ++L E G + C P+V
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTV-----------------CSPDV 221
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN +I + + G ++ A D+F +M GI + VTY +++ LC +D L+
Sbjct: 222 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQ 281
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M + +G YN+++YG Q EA+ K+M + + P V + + C
Sbjct: 282 MVN--KGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKY 339
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +++A+ FD M +G P+V Y +++ Y + + + ++L M G G P+ TF
Sbjct: 340 GKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTF 399
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G + A+ + E MR G P Y +I ALC G A Q
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNE-MR--DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVM 514
M+ +G++PD ++ L+ + LL E++S +M
Sbjct: 457 MIDQGVVPDKYAYHCLIQGFCTHGS---LLKAKELISEIM 493
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 27/284 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARAF 67
D F ++I L + + D DL + P ++N ++D LV + R F
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+++G++ + Y L+ G C R+ +G L M +G+KP++++YN +I L
Sbjct: 560 --DAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+ A+ +M E N T+SI++ K A+ L ++ + D++
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T+ ++ + RV +A ++ + R G +P TY+I+I
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLF-------------------ASISRSGLVPCAVTYSIMI 718
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
++ + G+++ A D+F+ M+ G + + ++R L I
Sbjct: 719 TNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 130/286 (45%), Gaps = 24/286 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ GV D Y Y L++G C + +L+ + + G++ + V + ++I++LCK G
Sbjct: 456 QMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515
Query: 131 KVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A+++ D+ P+ V +++L+ YC + AL + + S G P+VV
Sbjct: 516 RVMDAQNIF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 574
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
++ C +GR+ + + + E ++G G+ EM
Sbjct: 575 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 634
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G N TY+I++ + D A+ +F +++ + + +T +T+I G+ R+++
Sbjct: 635 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 694
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+ + S+ G Y+ ++ L +E +EA + M+
Sbjct: 695 AKDLFASI--SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQ 738
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ PS ++N I+D L + + +M SG+ + TY+I+++GL +
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
L +++ VK + + NT+I + + +V A+ L + + P VT+SI+I
Sbjct: 662 FLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNL 721
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
KE + A + + G PD + V+ L ++ A L + E+
Sbjct: 722 IKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDLA 64
++ + V+RGL + R ++ + + N+ + N+++ + V+E DL
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ R ++ V TY+I++ L V + + M++ G +P+S + N ++
Sbjct: 700 ASISRSGLVPCAV-----TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 754
Query: 125 SLCKNGKVGRARSLMSDMEEPN 146
L K ++ RA + +S ++E N
Sbjct: 755 ELLKKNEIVRAGAYLSKIDERN 776
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 181/385 (47%), Gaps = 32/385 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY ++ G C RV ++ M+ RG + PN Y T+I CK G+V A + +
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575
Query: 142 M-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M +P V ++ LI YC + L AL+ ++ G V T ++ L G
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDG 635
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R +A E++EE G KG P+V TYNILI+ +C+ G + AL
Sbjct: 636 RGTEAYELVEEMGG-------------------KGLAPDVFTYNILINGHCKEGNVKKAL 676
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F +M G+ VTY LI L G++ + K+ E + G + + YN+++
Sbjct: 677 EIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFD--EAVRRGIRPDLVLYNALIN 734
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D A E + +MEK + P V + + G C+ G V++A++ D+M E G P
Sbjct: 735 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 794
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y+ LI Y + V++A + EM G+ P T+N ++ GLC+ G A +V
Sbjct: 795 DLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMV 854
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKAL 459
+E + G P Y LI+ L
Sbjct: 855 KE---MVENGITPDDSTYISLIEGL 876
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 194/409 (47%), Gaps = 39/409 (9%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSF 174
+ +N ++ LC GK RA L+ M PN VT++ +I +C + AL ++ E
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRE 542
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKV 217
G P+ T V+ C VGRV +AV++ +E +G + GK+
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M +G V TYN+L+ + G A ++ +M G++ + TY+ L
Sbjct: 603 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 662
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G C G + L+I + M S+ G + + Y +++Y L ++ Q +++ +KL
Sbjct: 663 INGHCKEGNVKKALEIFENM--SRRGVRATVVTYTALIYALSKKGQ-------VQETDKL 713
Query: 338 FPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
F AV R ++ I GN++ A +M ++ P+ V Y+ L+ C
Sbjct: 714 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 773
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
RV EA +L+ EMT G P T+NT++SG +G+V AL++ E M +G P
Sbjct: 774 LGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM---NKGFNPT 830
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI+ LC+ G A ++ +MV GI PD T+ SL+ L+ +
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 181/389 (46%), Gaps = 60/389 (15%)
Query: 57 VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPN 115
V+ +D+ R + G+ + YTY ++ G C RV + K+ M ++G VKP
Sbjct: 530 VQAALDIMREMRER----GGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPE 585
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLE 171
+V+YN LI C GK+ A M E T+++L+ A + A L+E
Sbjct: 586 AVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVE 645
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLG 215
+ G PDV T ++ C G V A+EI E +G + G
Sbjct: 646 EMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKG 705
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
+V+ + E R+G P++ YN LI+S+ +G +D A ++ +M+ I+ + VTY+
Sbjct: 706 QVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYN 765
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
TL+RGLC GR+D+ K++ M ++ G + + YN++
Sbjct: 766 TLMRGLCLLGRVDEARKLIDEM--TERGIQPDLVTYNTL--------------------- 802
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
I G+ + G+V+DA R ++M+ +G P ++ Y+ LI C+ + +A
Sbjct: 803 ------------ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 850
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++KEM +G P ST+ +++ GL +
Sbjct: 851 ENMVKEMVENGITPDDSTYISLIEGLTTE 879
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 25/338 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P++ + TVI G + +++ VK D ++++ + P ++N+++ +
Sbjct: 548 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALL 607
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR +M+ GV TY +L+ L + R + ++L+ M +G+ P+ YN LI+ C
Sbjct: 608 YRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHC 667
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +A + +M VT++ LI A K+ + L +++ G PD+V
Sbjct: 668 KEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLV 727
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGR-----------------LGKVKGGCRFLKE 226
++ + G + A EI+ E E+ R LG+V + + E
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDE 786
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G P++ TYN LIS Y G + AL + N+M G + +TY+ LI+GLC G+
Sbjct: 787 MTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQ 846
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
DD +++ M ++ G S Y S++ GL E+++
Sbjct: 847 GDDAENMVKEMVEN--GITPDDSTYISLIEGLTTEDER 882
>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
Length = 741
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 178/401 (44%), Gaps = 30/401 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D + Y+I++ GLC R G+ LL +G PN +YN LI C G
Sbjct: 170 MWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGD 229
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + M+ PN T++ LIC +CK + A+VL + G P+VVT T
Sbjct: 230 LELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTT 289
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ CS G + A R L ME G PN T +LI + C
Sbjct: 290 LIQGQCSEGHLEHAF-------------------RLLHSMEACGLAPNEWTCLVLIDALC 330
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G ++ A + GI N V Y ++I LC G+ D ++Q + EG
Sbjct: 331 KHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI--ITEGFVPD 388
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
Y+S++ GL REN+ EA+ L M + AV ++ I + + K D
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISD 448
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M G P+VV Y I +YCQ+ R+ +A +M +M HG P +T+NT++ G G
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
V A ++ I G P Y+ L+ L +K +
Sbjct: 509 LVSQAFSSLKN---MIDNGCKPNDESYTVLLGLLLKKNSYH 546
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 220/486 (45%), Gaps = 42/486 (8%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
T++ L R M++D+ L +R + +L + ++++ A + ++ +
Sbjct: 48 TLLMALARHGMLSDM---ESLAARMPVR-NLHTYTTLINAYCHAGDLPAAKRHLSSLLRA 103
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ D + Y + G C T +L +M RG Y L+ LC G V A
Sbjct: 104 GLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREA 163
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
++ + M P+ +SI++ C A+ LL + GFVP+V +++
Sbjct: 164 MAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDG 223
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
CS G + A++I K M+ KGCLPNV TY LI +C++G
Sbjct: 224 YCSTGDLELAIDIF-------------------KGMQSKGCLPNVRTYTQLICGFCKSGK 264
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
++ A+ +++ M G++ N VTY TLI+G CS G ++ ++L ME ++P
Sbjct: 265 VERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACG------LAPN 318
Query: 312 N----SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
++ L + + +EA ++L + + + V + I C G + A
Sbjct: 319 EWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQ 378
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
++I EG VP+ +Y LI C+E ++ EA L+ +M G A F ++ R+
Sbjct: 379 KIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREF 438
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ K++ + M G P Y+ I++ C+ G + A +++QM+ G+ P+
Sbjct: 439 RSDSP-KMISDRMAAAGVK--PDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT 495
Query: 486 TWNSLL 491
T+N+L+
Sbjct: 496 TYNTLI 501
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 173/400 (43%), Gaps = 39/400 (9%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
NTL+ +L ++G + SL + M N T++ LI AYC +L A L G
Sbjct: 47 NTLLMALARHGMLSDMESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLA 106
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T + C R G CR M ++GC TY
Sbjct: 107 PDSHAYTSFVLGYC-------------------RTGLFAHACRLFLLMPQRGCARTPFTY 147
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ C G++ A+ VF M DG + + Y ++ GLC GR + + +L +
Sbjct: 148 AALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLT--DA 205
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
+G ++ YN+++ G + A++ K M+ P + I GFC G V
Sbjct: 206 MGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKV 265
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A + +MIE G PNVV Y LI C E + A L+ M G P T +
Sbjct: 266 ERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVL 325
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG------HYSPLIKALCEKGGFQSASML 471
+ LC+ G + A + + GSL G Y+ +I ALC+ G F A L
Sbjct: 326 IDALCKHGRIEEAQQFL---------GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNL 376
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
+ +++ +G +PD ++SL+ L ++ L + LLN+M+
Sbjct: 377 MQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMI 416
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/545 (23%), Positives = 231/545 (42%), Gaps = 79/545 (14%)
Query: 9 PDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PD ++ ++ GL G R V TD + + P++ ++N+++D D++LA
Sbjct: 177 PDSHVYSIMVHGLCGAGRAGEAVALLTDAMGK-GFVPNVAVYNALIDGYCSTGDLELAID 235
Query: 67 FYR----------------------------------KKMMASGVQGDDYTYAILMKGLC 92
++ +M+ +G+ + TY L++G C
Sbjct: 236 IFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQC 295
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDV 148
+ F+LLH M++ G+ PN LI +LCK+G++ A+ + + + N V
Sbjct: 296 SEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQV 355
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE-- 206
++ +I A CK A L++K + GFVPD + +++ LC ++++A+ +L
Sbjct: 356 IYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDM 415
Query: 207 -ESGEQG-------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
ESG Q R + M G P+V TY + I SYC+ G +
Sbjct: 416 IESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRM 475
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A + M G+ N TY+TLI+G + G + L+ M D+ G K Y
Sbjct: 476 EDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDN--GCKPNDESYT 533
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+L L ++N + + + K+ VD +K+L + +++I+
Sbjct: 534 VLLGLLLKKNSYHDLVADSISLWKI----VD--MKVL-----------EELLEEVIKLQC 576
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+YDC I + +R+ EA + M P + ++ R + AL+
Sbjct: 577 SSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALR 636
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
++ ++ R LP Y +I ALCE+G F +A + ++ K D + W L+
Sbjct: 637 FLDSMVK---RNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILID 693
Query: 493 CLSQQ 497
L Q+
Sbjct: 694 GLLQK 698
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 146/330 (44%), Gaps = 42/330 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD ++ ++I GL R + + + + + + + F ++D ++E +
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M A+GV+ D TY + ++ C R+ D ++ M GV+PN YNTLI
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V +A S + +M + PND ++++L+ K+ + + L+ S S + D+
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHD---LVADSISLWKIVDMKV 563
Query: 185 ITKVLE----LLCSVG--------RVMDAVEILEES-----GEQG--------------- 212
+ ++LE L CS R + V+ LEE+ G Q
Sbjct: 564 LEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIE 623
Query: 213 ---RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
R+ +K RFL M ++ LP +++Y +I + CE G +A +F D+ +
Sbjct: 624 CCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNR 683
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ + + LI GL G D ++L ME+
Sbjct: 684 DEIAWKILIDGLLQKGNTADCSRLLSFMEE 713
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 152/553 (27%), Positives = 249/553 (45%), Gaps = 71/553 (12%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYA 85
I+D +K D N+ L + +I+ K+ ++ ARA Y ++M+ +G D TY+
Sbjct: 222 IDDRIKKDD---NLNLEADLITYTTIISTYCKQHGLEEARALY-EEMIINGFLPDVVTYS 277
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP 145
++ GLC R+ + +LL MK GV PN V Y TLI SL K G A + S +
Sbjct: 278 SIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQL-VV 336
Query: 146 NDVTFSILICAYC-----KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+T +++C K A + +P+ +T T +++ C VG M+
Sbjct: 337 RGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGD-ME 395
Query: 201 AVEILEESGEQGRL------------GKVKGG-----CRFLKEMERKGCLPNVDTYNILI 243
VE L + E+ + G K G +K+M + +PN Y ILI
Sbjct: 396 RVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILI 455
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC+ G + A D++N+MK+ G+ N V +D L+ L G R+D+ ++L+ + + G
Sbjct: 456 DGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLK--DVTSRG 513
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFP-RAVDRSLKILGFCVDGNVEDAK 361
Y S++ G ++ ++ AL +++M EK P V ++ I G G E AK
Sbjct: 514 LLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AK 572
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ MIE G PN Y+ +I AYC++ + A EL EM H +P + T NT++ GL
Sbjct: 573 SVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGL 632
Query: 422 CRQGNVGTALKLVEE-DMRGI-----------------GRGSLPGSGH------------ 451
G + A+ ++ E + GI G+ + H
Sbjct: 633 SEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQ 692
Query: 452 --YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLL--- 504
Y+ LI C + A+ +L M+ G + D +T+N+L+ C S L
Sbjct: 693 EAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQ 752
Query: 505 LLNEMVSFVMVVH 517
+LNE VS +V +
Sbjct: 753 MLNEGVSPNIVTY 765
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 162/656 (24%), Positives = 276/656 (42%), Gaps = 141/656 (21%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-DVLVKEDIDLARAFY 68
D + TVI G + ++N + M F++I ++LVK + A Y
Sbjct: 76 DTVTYNTVIWGFCQHGLVNQAFGFLSI-----MVKKDTCFDTITCNILVKGFCRIGLAKY 130
Query: 69 RKKMMASGVQG----DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+++M + V G D + L+ G C + L+ M+ G+ + V YNTLI+
Sbjct: 131 GERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLIN 190
Query: 125 SLCKNGKVGRARSLMSDMEEPNDV-------------------------TFSILICAYCK 159
CK G+ +A+SL+ ++ E V T++ +I YCK
Sbjct: 191 GFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCK 250
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ L A L E+ GF+PDVVT + ++ LC GR+ +A E+
Sbjct: 251 QHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQEL--------------- 295
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETG-----------------VLD--------- 253
L+EM++ G PN Y LI S + G LD
Sbjct: 296 ----LREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVD 351
Query: 254 ---------SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
A D+F + + N +TY LI G C G ++ +LQ ME+
Sbjct: 352 GLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEK---- 407
Query: 305 KGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
I+P Y+S++ G ++ DEA+ +K+M + + P A ++ I G+C G E
Sbjct: 408 --HINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQE 465
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A +++M G N V++D L++ + +R+ EA EL+K++T G L + +++
Sbjct: 466 IATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLM 525
Query: 419 SGLCRQGNVGTALKLVEE--------------------------DMRGIGRGSL-----P 447
G + G AL +VEE + + + G + P
Sbjct: 526 DGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEMGLAP 585
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLL 506
Y+ +IKA C++G +A L +M I+P +T N+L++ LS+ + +L
Sbjct: 586 NQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVL 645
Query: 507 NEM----VSFVMVVHE--LSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFII 556
NEM + +V+H L+A K K ++ L V +GL+I+ + +I
Sbjct: 646 NEMSVMGIHPNLVIHRVLLNASSKSGKANAV--LQMHEQLVDMGLKINQEAYNNLI 699
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 238/534 (44%), Gaps = 62/534 (11%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMA 74
T++ GL ++ + +S+ N+ P+ + +++D K D++ + ++ M
Sbjct: 348 TLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQE-MEE 406
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+ + TY+ ++ G + + ++ M + + PN+ +Y LI CK GK
Sbjct: 407 KHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEI 466
Query: 135 ARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L ++M+ + N+V F +L+ + + + A LL+ S G + D V T +++
Sbjct: 467 ATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMD 526
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
G+ A+ ++EE E+ GK + + +E G P
Sbjct: 527 GFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIEM-GLAP 585
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N TYNI+I +YC+ G LD+AL+++N+MK I + +T +TL+ GL G I+ + +L
Sbjct: 586 NQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVL 645
Query: 295 QLME-----------------DSKEGSKGRI----------------SPYNSVLYGLYRE 321
M SK G + YN+++ R
Sbjct: 646 NEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRL 705
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+A LK M + V + I G+C +V+ A + QM+ EG PN+V Y
Sbjct: 706 RMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTY 765
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ L+ + E EL +M +G P AST++T++SG + GN +++L E
Sbjct: 766 NLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCE--- 822
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ +G +P + Y+ LI + G A LL +M +G+ P T++ +LIC
Sbjct: 823 MVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYD-ILIC 875
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 194/437 (44%), Gaps = 69/437 (15%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ + P +++N LI+ G V + + ++M PN T ++L+ A+CK N
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------- 212
L+ AL LL + D VT V+ C G V A L ++
Sbjct: 61 LILALDLLR---NVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117
Query: 213 ------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
R+G K G R + + G +V +N LI YC+ G + ALD+ M+ +G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + V+Y+TLI G C G D +L + +S+ G K +SV + + ++D+
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESR-GVK------DSVFFNIDDRIKKDD 230
Query: 327 ALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L L + + I +C +E+A+ +++MI G +P+VV Y +++
Sbjct: 231 NL-------NLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGL 283
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV-------------GTALKL 433
C++ R+ EA EL++EM G P + T++ L + G+ G L L
Sbjct: 284 CKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDL 343
Query: 434 V-----------------EEDM-RGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQ 474
V EDM R + + +L P S Y+ LI C+ G + LL +
Sbjct: 344 VMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQE 403
Query: 475 MVGKGILPDYLTWNSLL 491
M K I P+ +T++S++
Sbjct: 404 MEEKHINPNVITYSSII 420
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 221/510 (43%), Gaps = 57/510 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDL 63
P+ ++ +I G +A ATDL + ++ LK+ N + DVLV + +D
Sbjct: 446 PNAYVYAILIDGYCKA---GKQEIATDLYNEMKLS-GLKVNNVLFDVLVNNLKRGKRMDE 501
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A K + + G+ D Y LM G + ++ M + + + V YN LI
Sbjct: 502 AEELL-KDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLI 560
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ L ++GK A+S+ S M E PN T++I+I AYCK+ L NAL L + S +
Sbjct: 561 NGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIM 619
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P +T ++ VG L E+GE ++ L EM G PN+ +
Sbjct: 620 PSSITCNTLV-----VG--------LSEAGE------IEKAMNVLNEMSVMGIHPNLVIH 660
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+L+++ ++G ++ L + + G+ N Y+ LI C +L+ M
Sbjct: 661 RVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYM-- 718
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
++G YN+++ G + +AL QM E + P V +L + G G +
Sbjct: 719 IRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLM 778
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ FD+M E G P+ YD LI Y + +E+ L EM G++P ST+N +
Sbjct: 779 AERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVL 838
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC------------EKGGF 465
+S + G + A +L+ E RG P S Y LI C +K
Sbjct: 839 ISDFAKVGKMDQARELLNEMQV---RGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYR 895
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLS 495
A L+ +M KG +P S + C+S
Sbjct: 896 TDAKNLITEMNDKGFVP----CKSTIACIS 921
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/538 (22%), Positives = 231/538 (42%), Gaps = 100/538 (18%)
Query: 39 RFNMTPSLKIFNSILDV-----LVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCL 93
+ N+ P+L ++N ++ LV + D+ +M+ S V + YT+ +L+ C
Sbjct: 3 KHNIVPTLLLWNQLIYHFNAFGLVSQVCDI-----YTEMLCSAVPPNVYTHNVLVHAWC- 56
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND------ 147
++G+ L ++++ V+ ++V YNT+I C++G V +A +S M + +
Sbjct: 57 --KMGNLILALDLLRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTIT 114
Query: 148 ---------------------------------VTFSILICAYCKEENLVNALVLLEKSF 174
+ F+ LI YCK + AL L+E+
Sbjct: 115 CNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMR 174
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF-----LKEMER 229
G + D+V+ ++ C G A +L E E VK F +K+ +
Sbjct: 175 KEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISES---RGVKDSVFFNIDDRIKKDDN 231
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
++ TY +IS+YC+ L+ A ++ +M I+G + VTY +++ GLC GR+ +
Sbjct: 232 LNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSE 291
Query: 290 GLKILQLME---------------DS--KEGSKGRISPYNSVLY---------------- 316
++L+ M+ DS K GS S L
Sbjct: 292 AQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVD 351
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
GL++ ++ EA + + + K L P ++ + I G+C G++E + +M E+ P
Sbjct: 352 GLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINP 411
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
NV+ Y +I+ Y ++ + EA +MK+M +P A + ++ G C+ G A L
Sbjct: 412 NVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLY 471
Query: 435 EE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E + G+ ++ + L+ L A LL + +G+L D++ + SL+
Sbjct: 472 NEMKLSGLKVNNVL----FDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLM 525
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 204/434 (47%), Gaps = 27/434 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D T+ IL+ C+ R LH+M GV+P+ + T++H+LC+ G V AR L
Sbjct: 281 DVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLF 340
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+++ PN ++ L+ Y K + A +L E+ + G PD VT ++
Sbjct: 341 DGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKY 400
Query: 196 GRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTY 239
GR+ D+ +L++ G G++ + L+E+ KG +V +
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAF 460
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI +Y G+ D A + + M G + + T ++L+ GLC G + + +L M +
Sbjct: 461 NSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
+G Y +L G ++ N + A K+M++ ++P AV + I G GNV
Sbjct: 521 --KGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNV 578
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E+A F +M G VPN Y+ LI C RV EA +L KEM G L TFN +
Sbjct: 579 EEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNII 638
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G CR+G + A++ DM+ IG LP ++ LI C+ A ++ +M
Sbjct: 639 IDGFCRRGQMKFAIETF-LDMQRIGL--LPDIFTFNILIGGYCKAFDMVGAGEIVNKMYS 695
Query: 478 KGILPDYLTWNSLL 491
G+ PD T+N+ +
Sbjct: 696 CGLDPDITTYNTYM 709
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 27/444 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M+ G + + T+ ++ G C +RV G LLH+M P+ V +N LI++ C
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295
Query: 130 GKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A + M EP+ TF+ ++ A C+E N+V A L + G P+
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
+++ V A + EE G + G+++ R LK++
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G + Y++++SS C G LD A+ + ++ G++ + V +++LI G D
Sbjct: 416 SGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDK 475
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFP-RAVDRSLK 347
+ ++M + G S NS+L GL R+ EA L +M EK FP V ++
Sbjct: 476 AFEAYRIM--VRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVL 533
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G+ N+E A+ + +M E G P+ V + LI + V EA E+ EM+ G+
Sbjct: 534 LDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGF 593
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P +N+++ GLC G V ALKL E++MR +G L + ++ +I C +G +
Sbjct: 594 VPNNFAYNSLIRGLCDCGRVTEALKL-EKEMR--QKGLLSDTFTFNIIIDGFCRRGQMKF 650
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A + M G+LPD T+N L+
Sbjct: 651 AIETFLDMQRIGLLPDIFTFNILI 674
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 206/439 (46%), Gaps = 30/439 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + F T++ L R + + K D + + P+ I+N+++D K +
Sbjct: 315 PSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLL 374
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M +GV D T+ IL+ G R+ D +LL + G+ +S +Y+ ++ SLC
Sbjct: 375 YEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCW 434
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCK---EENLVNALVLLEKSFSFGFVPD 181
G++ A L+ ++ E + V F+ LI AY + E+ A ++ + GF P
Sbjct: 435 AGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRC---GFTPS 491
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
T +L LC G + +A +L E+G ++ ++G K
Sbjct: 492 SSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWK 551
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM+ +G P+ + LI + G ++ A +VF +M G N Y++LIRGLC G
Sbjct: 552 EMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG 611
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
R+ + LK+ + M ++G +N ++ G R Q A+E M++ L P
Sbjct: 612 RVTEALKLEKEMR--QKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFT 669
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I G+C ++ A ++M G P++ Y+ +H YC+ ++ +A ++ ++
Sbjct: 670 FNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLI 729
Query: 404 GHGYLPIASTFNTVLSGLC 422
G +P T+NT+LSG+C
Sbjct: 730 SAGIVPDTVTYNTMLSGIC 748
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 187/409 (45%), Gaps = 33/409 (8%)
Query: 97 VGDGFKLLHV---MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVT 149
VG GF+ L V M+ GV+P L+ L + G G L DM P+++T
Sbjct: 190 VGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLT 249
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ +IC +C++ +V LL F PDVVT ++ C GR A++
Sbjct: 250 FNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAID------ 303
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+L M R G P+V T+ ++ + C G + A +F+ ++ GI+
Sbjct: 304 -------------WLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAP 350
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N Y+TL+ G + + + M + G +N +++G Y+ + +++
Sbjct: 351 NAAIYNTLMDGYFKAREVAQASLLYEEMRTT--GVSPDCVTFNILVWGHYKYGRIEDSDR 408
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
LK + LF + + + C G +++A + +++E+G +VV ++ LI AY
Sbjct: 409 LLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYS 468
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ +A E + M G+ P +ST N++L GLCR+G + A L+ R + +G
Sbjct: 469 RAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILL---YRMLEKGFPI 525
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y+ L+ + + A L +M +GI PD + + +L+ LS+
Sbjct: 526 NKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSK 574
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P F +++D L K +++ A + + M A G +++ Y L++GLC RV + K
Sbjct: 560 PDAVAFTALIDGLSKAGNVEEAYEVFLE-MSAIGFVPNNFAYNSLIRGLCDCGRVTEALK 618
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
L M+ +G+ ++ +N +I C+ G++ A DM+ P+ TF+ILI YC
Sbjct: 619 LEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYC 678
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-- 216
K ++V A ++ K +S G PD+ T + C + ++ AV IL++ G +
Sbjct: 679 KAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTV 738
Query: 217 -----VKGGCR--------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G C ++ + G +PNV T N+L+S +C+ G+ + AL K
Sbjct: 739 TYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL--IWGQK 796
Query: 264 IDGISWNF--VTYDTLIRGLC 282
+ IS+ F ++Y L + C
Sbjct: 797 LREISFGFDEISYRILDQAYC 817
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 138/347 (39%), Gaps = 46/347 (13%)
Query: 187 KVLELLCSVGRVMDA--VEILEESGEQGRLGKVKGG--CRFLKEMERKGCLPNVD--TYN 240
++L L C V+ A +++L + + +V G + + M R + D N
Sbjct: 122 EILRLSCVAAHVLAAQKLQLLAQDVVSWLIARVGTGRTNKIVDFMWRNHAMYESDFSVLN 181
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ + G+ AL+V M+ G+ + L+R L G D + +L +D
Sbjct: 182 TLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIG---DYGSVWKLFKDM 238
Query: 301 -KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNV 357
+G + +N+++ G R+++ L M K P V ++ I C+ G
Sbjct: 239 IFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRT 298
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
A M+ G P+V + ++HA C+E V EA +L + G P A+ +NT+
Sbjct: 299 WVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTL 358
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIG---------------------------------RG 444
+ G + V A L+ E+MR G G
Sbjct: 359 MDGYFKAREVAQA-SLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSG 417
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
S Y ++ +LC G A LL +++ KG+ + +NSL+
Sbjct: 418 LFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLI 464
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 201/426 (47%), Gaps = 28/426 (6%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
IQS P SI F V+ + +++ + V+ + + L +N +++ L +
Sbjct: 61 IQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRF 120
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ KMM G + D T + L+ G C NRV D L+ M+ G +P+ VIYNT+
Sbjct: 121 VIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 180
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I CK G V A L ME + VT++ L+ C +A L+
Sbjct: 181 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+V+T T V+++ G+ +A+++ EE M R+ P+V T
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEE-------------------MTRRCVDPDVFT 281
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN LI+ C G +D A + + M G + VTY+TLI G C R+D+G K+ + M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM- 340
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
++ G G YN+++ G ++ + D A E +M+ P S+ + G C++ VE
Sbjct: 341 -AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-PNIRTYSILLYGLCMNWRVE 398
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A F+ M + ++ Y+ +IH C+ V +A +L + ++ G P ++ T++
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 419 SGLCRQ 424
SG CR+
Sbjct: 459 SGFCRK 464
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 189/383 (49%), Gaps = 37/383 (9%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVL 169
P+ V ++ ++ + K+ SL ME + +++I+I C+ V AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
+ K FG+ PDVVT++ ++ C RV DA++++ + ME
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK-------------------MEE 167
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P+V YN +I C+ G+++ A+++F+ M+ DG+ + VTY++L+ GLC GR D
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 290 GLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++++ +M D + + +V+ +E + EA++ ++M + + P +
Sbjct: 228 AARLMRDMVMRDIVPN----VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C+ G V++AK+ D M+ +G +P+VV Y+ LI+ +C+ +RV E ++L +EM
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G + T+NT++ G + G A ++ S P YS L+ LC
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSR------MDSRPNIRTYSILLYGLCMNWRV 397
Query: 466 QSASMLLVQMVGKGILPDYLTWN 488
+ A +L M I D T+N
Sbjct: 398 EKALVLFENMQKSEIELDITTYN 420
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 187/403 (46%), Gaps = 32/403 (7%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
L H M+ G+ + YN +I+ LC+ + A S++ M EP+ VT S LI +C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL---- 214
+ + +A+ L+ K GF PDVV +++ C +G V DAVE+ + G
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 215 ------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
G+ R +++M + +PNV T+ +I + + G A+ ++ +M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + TY++LI GLC GR+D+ ++L LM +G + YN+++ G +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM--VTKGCLPDVVTYNTLINGFCKSK 328
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DE + ++M + L + + I G+ G + A+ F +M PN+ Y
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYS 385
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L++ C RV +A L + M +T+N V+ G+C+ GNV A L R
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL----FRS 441
Query: 441 IG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ +G P Y+ +I C K + + +L +M G+LP
Sbjct: 442 LSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 39/499 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + TV+ GL R + + D V ++ PS+ FNSI+ K +D+A++F+
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 258
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ Y++ IL+ GLCL + + +L M GV+P+SV YN L
Sbjct: 259 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 317
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVV 183
G + A ++ DM + P+ +T++IL+C C+ N+ LVLL+ S GF + ++
Sbjct: 318 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 377
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC GR+ +A+ + +M+ G P++ Y+I+I
Sbjct: 378 PCSVMLSGLCKTGRIDEALSLF-------------------NQMKADGLSPDLVAYSIVI 418
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G D AL ++++M I N T+ L+ GLC G + + +L + S G
Sbjct: 419 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS--G 476
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN V+ G + +EALE K + + + P + I G+C N+ +A+
Sbjct: 477 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 536
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D + G P+VV Y L+ AY + EL +EM G P T++ + GL
Sbjct: 537 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 596
Query: 422 CR---QGNVGTAL--KLVEEDMRGI----GRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
CR N L ++ E+ +G+ G P Y+ +I+ LC A + L
Sbjct: 597 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 656
Query: 473 VQMVGKGILPDYLTWNSLL 491
M + + T+N L+
Sbjct: 657 EIMKSRNLDASSATYNILI 675
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 218/489 (44%), Gaps = 68/489 (13%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQG 79
R RM++D + + N+ S + +NS+L + D D+ + K
Sbjct: 148 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK--------- 198
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+++TY+ ++ GLC ++ D L + + + P+ V +N+++ CK G V A+S
Sbjct: 199 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 258
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
++L C G VP V + ++ LC VG +
Sbjct: 259 C----------TVLKC---------------------GLVPSVYSHNILINGLCLVGSIA 287
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A+E+ + + G LG + G +++M KG P+V TY IL+
Sbjct: 288 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 347
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWN-FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ G +D L + DM G N + ++ GLC GRID+ L + M+ +
Sbjct: 348 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK--AD 405
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + Y+ V++GL + + D AL +M +++ P + +LG C G + +A
Sbjct: 406 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 465
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ D +I G ++V+Y+ +I Y + + EA EL K + G P +TFN+++ G
Sbjct: 466 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 525
Query: 421 LCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C+ N+ A K+++ + G+ P Y+ L+ A G +S L +M +G
Sbjct: 526 YCKTQNIAEARKILDVIKLYGLA----PSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 581
Query: 480 ILPDYLTWN 488
I P +T++
Sbjct: 582 IPPTNVTYS 590
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYC 247
++ D + +++ E V G CR FL+ E K P+V ++N ++S YC
Sbjct: 187 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 246
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G +D A F + G+ + +++ LI GLC G I + L++ + + +K
Sbjct: 247 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL------ASDMNKHG 300
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ P +SV Y + + GF + G + A M
Sbjct: 301 VEP-DSVTYNILAK----------------------------GFHLLGMISGAWEVIRDM 331
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGN 426
+++G P+V+ Y L+ CQ + L+K+M G+ L + +LSGLC+ G
Sbjct: 332 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 391
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L + M+ G P YS +I LC+ G F A L +M K ILP+ T
Sbjct: 392 IDEALSLFNQ-MKADGLS--PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 448
Query: 487 WNSLLICLSQQ 497
+LL+ L Q+
Sbjct: 449 HGALLLGLCQK 459
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 159/405 (39%), Gaps = 46/405 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + VI GL + + + D + + P+ + ++L L ++ + L
Sbjct: 409 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 468
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++SG D Y I++ G + + + +L V+ G+ P+ +N+LI+ CK
Sbjct: 469 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 528
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ AR ++ ++ P+ V+++ L+ AY N + L + + G P VT
Sbjct: 529 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 588
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ + + LC + + +L E K K G L++ME +G P+ TYN +I
Sbjct: 589 YSVIFKGLCRGWKHENCNHVLRER----IFEKCKQG---LRDMESEGIPPDQITYNTIIQ 641
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C L A MK + + TY+ LI LC G I
Sbjct: 642 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-------------- 687
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+S +Y L +N Y + I CV G+ E A + F
Sbjct: 688 -------DSFIYSLQEQNVSLSKFAY--------------TTLIKAHCVKGDPEMAVKLF 726
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
Q++ G ++ Y +I+ C+ V E+ M G P
Sbjct: 727 HQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISP 771
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 8/175 (4%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARA 66
PPD+ + T+I+ L R + ++ +++ N+ S +N ++D L V I A +
Sbjct: 630 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 689
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + V + Y L+K C+ KL H + RG + Y+ +I+ L
Sbjct: 690 FIY-SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 748
Query: 127 CKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ V ++ M ++ + IC E ++ + LL + +G +PD
Sbjct: 749 CRRHLVNESKFFFCLMLSQG-ISPDLDIC-----EVMIKSDELLSWTIKWGLLPD 797
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 223/506 (44%), Gaps = 61/506 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P++ +N ++D L KE M+ + V+ + TY+ LM G L V
Sbjct: 199 INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ 258
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME------------------ 143
+ + M GV P+ YN +I+ CK +V +A +L +M
Sbjct: 259 HVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFA 318
Query: 144 --------------------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+P+ T +ILI +C + +L K G+ P V
Sbjct: 319 KMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTV 378
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T+ +++ LC G+V A+ ++ QG ++G +G + L+++
Sbjct: 379 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 438
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ + PNV+ Y+ +I + C+ ++ A +F++M + GIS + VTY TLI G C G++
Sbjct: 439 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL 498
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
+ + +L M R Y ++ L +E + EA L M K + P +
Sbjct: 499 KEAIGLLNEMVLKTINPDVRT--YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYN 556
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+ + V+ A+ F+ M G P+V Y LI+ +C+ + V EA L KEM
Sbjct: 557 TLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK 616
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+P T+++++ GLC+ G + L++E MR RG Y+ LI LC+ G
Sbjct: 617 NMVPDTVTYSSLVDGLCKSGRISYVWDLIDE-MR--DRGQPADVITYNSLIDGLCKNGHL 673
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A L +M +GI P+ T+ LL
Sbjct: 674 DKAIALFNKMKDQGIRPNTFTFTILL 699
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 212/462 (45%), Gaps = 66/462 (14%)
Query: 44 PSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS N+++ L +K + A F+ K++A G Q + +YA L+ G+C K
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFH-DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIK 433
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
LL + R KPN +Y+T+I +LCK V A L S+M + VT+S LI +C
Sbjct: 434 LLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFC 493
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE------------ 206
L A+ LL + PDV T T +++ L G+V +A +L
Sbjct: 494 IVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVF 553
Query: 207 --ESGEQGRL--GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ G L +VK M G P+V TY ILI+ +C++ ++D AL++F +M
Sbjct: 554 TYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEM 613
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + VTY +L+ GLC GRI ++ M D G + YNS++ GL
Sbjct: 614 HQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRD--RGQPADVITYNSLIDGL---- 667
Query: 323 QQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
C +G+++ A F++M ++G PN + L
Sbjct: 668 -----------------------------CKNGHLDKAIALFNKMKDQGIRPNTFTFTIL 698
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---EEDMR 439
+ C+ R+++A E+ +++ GY +N ++ G C+QG + AL ++ EE+
Sbjct: 699 LDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEEN-- 756
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
G +P + + +I AL +K A LL QM+ +G+L
Sbjct: 757 ----GCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 246/561 (43%), Gaps = 93/561 (16%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ T+I G+ R I D A + + + P+++++N+I+D L K +
Sbjct: 101 YATLINGVCR---IGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFS 157
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G+ + TY+ L+ G C+ ++ + LL+VM + + PN YN L+ +LCK G
Sbjct: 158 EMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEG 217
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYC------KEENLVNALVLLEKSFSFGFVP 180
KV A+S+++ M + N +T+S L+ Y K +++ NA+ L+ G P
Sbjct: 218 KVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLM------GVTP 271
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE--------------------------------- 207
DV + ++ C + RV A+ + +E
Sbjct: 272 DVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSH 331
Query: 208 ----SGEQGRL-------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
G Q L G++ G L ++ ++G P+ T N LI C G
Sbjct: 332 RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ AL + + G N V+Y TLI G+C G +K+L+ ++ +K +
Sbjct: 392 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDG--RLTKPNVEM 449
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y++++ L + EA +M + + V S I GFC+ G +++A ++M+
Sbjct: 450 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMV 509
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC------ 422
+ P+V Y L+ A +E +V+EA ++ M P T+NT+++G
Sbjct: 510 LKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVK 569
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ +V A+ L+ G P Y+ LI C+ A L +M K ++P
Sbjct: 570 KAQHVFNAMSLM---------GVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620
Query: 483 DYLTWNSLL--ICLSQQTTWL 501
D +T++SL+ +C S + +++
Sbjct: 621 DTVTYSSLVDGLCKSGRISYV 641
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 210/459 (45%), Gaps = 50/459 (10%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGD---GFKLLHVMKSRGVKPNSVIYNTLIH 124
+ K++A G Q + +YA L+ G+C R+GD K L + R KPN +YNT+I
Sbjct: 85 FHDKLLAQGFQLNQVSYATLINGVC---RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIID 141
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+LCK V A L S+M N VT+S LI +C L AL LL P
Sbjct: 142 ALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINP 201
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL-PNVDTY 239
+V T +++ LC G+V +A +L + K C+ NV TY
Sbjct: 202 NVCTYNILVDALCKEGKVKEAKSVL--------------------AVMLKACVKSNVITY 241
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ L+ Y + A VFN M + G++ + +Y+ +I G C R+D L +
Sbjct: 242 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLF----- 296
Query: 300 SKEGSKGRISP---YNSVLYGLYRENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVD 354
KE R P +N +L + A L + +++ + P ++ I FC
Sbjct: 297 -KEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHM 355
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G + ++++ G P+ V + LI C + +V++A ++ G+ ++
Sbjct: 356 GQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSY 415
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
T+++G+C+ G+ A+KL +R I GR + P YS +I ALC+ A L
Sbjct: 416 ATLINGVCKIGDTRGAIKL----LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 471
Query: 474 QMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMV 510
+M KGI D +T+++L+ C+ + + LLNEMV
Sbjct: 472 EMTVKGISADVVTYSTLIYGFCIVGKLKE-AIGLLNEMV 509
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 196/424 (46%), Gaps = 73/424 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ T+I G+ + I D A L+ + + P+++++++I+D L K +
Sbjct: 415 YATLINGVCK---IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFS 471
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G+ D TY+ L+ G C+ ++ + LL+ M + + P+ Y L+ +L K G
Sbjct: 472 EMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEG 531
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYC------KEENLVNALVLLEKSFSFGFVP 180
KV A+S+++ M +P+ T++ L+ Y K +++ NA+ L+ G P
Sbjct: 532 KVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLM------GVTP 585
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FL 224
DV T T ++ C V +A+ + +E ++ + V G C+ +
Sbjct: 586 DVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLI 645
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM +G +V TYN LI C+ G LD A+ +FN MK GI N T+ L+ GLC G
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR+ D ++ Q + +G + YN ++YG ++ +EAL L +ME
Sbjct: 706 GRLKDAQEVFQ--DLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME--------- 754
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
E G +PN V +D +I+A +++ +A +L+++M
Sbjct: 755 ------------------------ENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIA 790
Query: 405 HGYL 408
G L
Sbjct: 791 RGLL 794
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 173/353 (49%), Gaps = 28/353 (7%)
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------- 212
+L +L K G+ PD VT+ +++ LC G+V +A+ ++ QG
Sbjct: 47 SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106
Query: 213 ---RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
R+G + +FL++++ + PNV+ YN +I + C+ ++ A +F++M + GIS
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N VTY TLI G C G++ + L +L +M + + YN ++ L +E + EA
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVM--VLKTINPNVCTYNILVDALCKEGKVKEAKS 224
Query: 330 YLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L M K ++ + S + G+ + V+ A+ F+ M G P+V Y+ +I+ +C
Sbjct: 225 VLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC 284
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSL 446
+ +RV +A L KEM + PI FN +L + + TA+ L +++GI
Sbjct: 285 KIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLELKGIQ---- 339
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
P + LI C G +L +++ +G P +T N+L+ +CL Q
Sbjct: 340 PDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQ 392
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 11/210 (5%)
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA----- 341
+DD + + L + K G N+++ GL + Q EAL + +KL +
Sbjct: 42 VDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHF---HDKLLAQGFQLNQ 98
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + I G C G+ A + ++ PNV +Y+ +I A C+ + V EA L E
Sbjct: 99 VSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSE 158
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
MT G T++T++ G C G + AL L+ + + P Y+ L+ ALC+
Sbjct: 159 MTVKGISANVVTYSTLIYGFCIVGKLKEALGLLN---VMVLKTINPNVCTYNILVDALCK 215
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G + A +L M+ + + +T+++L+
Sbjct: 216 EGKVKEAKSVLAVMLKACVKSNVITYSTLM 245
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 202/431 (46%), Gaps = 63/431 (14%)
Query: 48 IFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
IFN++L L E+ + A ++K + + + ++ Y +M GLC F LL +
Sbjct: 144 IFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEEN 162
M+ KPN+ IY+ +I + CK+G + A SL+++M++ P+ T+S LI A CK
Sbjct: 204 MEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
N L + P+V T V++ LC G+V DA EI+ R
Sbjct: 264 WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIM----------------R 307
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
++ E KG P+V TYN++I Y G +D A ++F+ M I N ++Y+ LI G
Sbjct: 308 YMIE---KGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYA 364
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR-------ENQQDEAL------- 328
+ID+ +++ + E S++G K I N +L+GL+ +N DE L
Sbjct: 365 RQKKIDEAMQVCR--EISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD 422
Query: 329 ------------------EYLKQMEKLFPRAVDRSLKIL-----GFCVDGNVEDAKRCFD 365
E + KL R D +++I G C +G ++ A F+
Sbjct: 423 LYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFE 482
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
++ G P+V+ Y +I YCQE + EA +++++M +G L T+N ++ G R
Sbjct: 483 KLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542
Query: 426 NVGTALKLVEE 436
V +EE
Sbjct: 543 KVSEMKAFLEE 553
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 206/496 (41%), Gaps = 101/496 (20%)
Query: 44 PSLKIFNSILDVLVKED-----IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
PS+ F+ +L LV + L R ++ + + ++ +I++ CL +R
Sbjct: 70 PSVVSFSKLLKALVHMKHYSSVVSLFREIHKLR-----IPVHEFILSIVVNSCCLMHRTD 124
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYC 158
GF +L + +G+ N VI+NTL+ L KV A L + N IC
Sbjct: 125 LGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN-------ICE-- 175
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
P+ V V+ LC G A ++L
Sbjct: 176 ---------------------PNEVMYGTVMNGLCKKGHTQKAFDLL------------- 201
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ ME+ PN Y+I+I ++C+ G+LD A + N+MK I + TY TLI
Sbjct: 202 ------RLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLI 255
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK- 336
LC + ++ + +E + +NSV+ GL +E + ++A E ++ M EK
Sbjct: 256 DALCKLSQWENVRTLF--LEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKG 313
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + ++ I G+ + G V+ A+ FD MI + PN++ Y+ LI+ Y +++++ EA
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAM 373
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP--------- 447
++ +E++ G P T N +L GL G +A +E + G +P
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSA---GHIPDLYTHCTLL 430
Query: 448 -----------GSGH---------------YSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
H Y+ +I LC+ G A ++ G+
Sbjct: 431 GGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLH 490
Query: 482 PDYLTWNSLLICLSQQ 497
PD +T+ +++ Q+
Sbjct: 491 PDVITYTAMISGYCQE 506
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 155/381 (40%), Gaps = 57/381 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E ++ TV+ GL + L+ + + P+ I++ ++D K+ +
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M + D +TY+ L+ LC ++ + L M + PN +N++I LCK
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295
Query: 129 NGK-----------------------------------VGRARSLMSDM----EEPNDVT 149
GK V RAR + M EPN ++
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIIS 355
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ILI Y +++ + A+ + + G P +VT +L L +GR A +E
Sbjct: 356 YNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEML 415
Query: 210 EQGRLGKVKGGCRFL----------------KEMERKGCLPNVDTYNILISSYCETGVLD 253
G + + C L ++ER+ N+ Y +I C+ G LD
Sbjct: 416 SAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLD 475
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A F + + G+ + +TY +I G C G +D+ +L+ MED+ G YN
Sbjct: 476 KAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDN--GCLADNRTYNV 533
Query: 314 VLYGLYRENQQDEALEYLKQM 334
++ G R N+ E +L+++
Sbjct: 534 IVRGFLRSNKVSEMKAFLEEI 554
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 7/132 (5%)
Query: 372 GVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNVGT 429
G+P N VI++ L+ E +V++A L K++ P + TV++GLC++G+
Sbjct: 137 GIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 430 ALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L +R + +GS P + YS +I A C+ G A+ LL +M K I PD T++
Sbjct: 197 AFDL----LRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYS 252
Query: 489 SLLICLSQQTTW 500
+L+ L + + W
Sbjct: 253 TLIDALCKLSQW 264
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 201/426 (47%), Gaps = 28/426 (6%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
IQS P SI F V+ + +++ + V+ + + L +N +++ L +
Sbjct: 2 IQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRF 61
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ KMM G + D T + L+ G C NRV D L+ M+ G +P+ VIYNT+
Sbjct: 62 VIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 121
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I CK G V A L ME + VT++ L+ C +A L+
Sbjct: 122 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 181
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+V+T T V+++ G+ +A+++ EE M R+ P+V T
Sbjct: 182 VPNVITFTAVIDVFVKEGKFSEAMKLYEE-------------------MTRRCVDPDVFT 222
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN LI+ C G +D A + + M G + VTY+TLI G C R+D+G K+ + M
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM- 281
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
++ G G YN+++ G ++ + D A E +M+ P S+ + G C++ VE
Sbjct: 282 -AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-PNIRTYSILLYGLCMNWRVE 339
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A F+ M + ++ Y+ +IH C+ V +A +L + ++ G P ++ T++
Sbjct: 340 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 399
Query: 419 SGLCRQ 424
SG CR+
Sbjct: 400 SGFCRK 405
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 191/386 (49%), Gaps = 37/386 (9%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVL 169
P+ V ++ ++ + K+ SL ME + +++I+I C+ V AL +
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
+ K FG+ PDVVT++ ++ C RV DA++++ + ME
Sbjct: 68 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK-------------------MEE 108
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P+V YN +I C+ G+++ A+++F+ M+ DG+ + VTY++L+ GLC GR D
Sbjct: 109 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 168
Query: 290 GLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++++ +M D + + +V+ +E + EA++ ++M + + P +
Sbjct: 169 AARLMRDMVMRDIVPN----VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 224
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C+ G V++AK+ D M+ +G +P+VV Y+ LI+ +C+ +RV E ++L +EM
Sbjct: 225 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G + T+NT++ G + G A ++ S P YS L+ LC
Sbjct: 285 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSR------MDSRPNIRTYSILLYGLCMNWRV 338
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +L M I D T+N ++
Sbjct: 339 EKALVLFENMQKSEIELDITTYNIVI 364
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 187/403 (46%), Gaps = 32/403 (7%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
L H M+ G+ + YN +I+ LC+ + A S++ M EP+ VT S LI +C
Sbjct: 32 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 91
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL---- 214
+ + +A+ L+ K GF PDVV +++ C +G V DAVE+ + G
Sbjct: 92 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 151
Query: 215 ------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
G+ R +++M + +PNV T+ +I + + G A+ ++ +M
Sbjct: 152 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 211
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + TY++LI GLC GR+D+ ++L LM +G + YN+++ G +
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM--VTKGCLPDVVTYNTLINGFCKSK 269
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DE + ++M + L + + I G+ G + A+ F +M PN+ Y
Sbjct: 270 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYS 326
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L++ C RV +A L + M +T+N V+ G+C+ GNV A L R
Sbjct: 327 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL----FRS 382
Query: 441 IG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ +G P Y+ +I C K + + +L +M G+LP
Sbjct: 383 LSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 209/474 (44%), Gaps = 67/474 (14%)
Query: 20 GLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQ 78
L R RM+ D+ A+ + +R +L+ + ++++ A + ++ +G
Sbjct: 50 ALARHRMLADMESFASRMPAR-----NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFA 104
Query: 79 GDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL 138
D + Y + G C + +L +M RG + Y L+H LC G V A S+
Sbjct: 105 PDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSV 164
Query: 139 MSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+ M+ P+ ++ ++ C A LL + + GF P+VV +++ C+
Sbjct: 165 FAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCN 224
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
VG + AV++ E M+ GC PNV TY LIS +C++ LD
Sbjct: 225 VGDLELAVDVFER-------------------MDVNGCSPNVRTYTELISGFCKSRKLDR 265
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+ +F+ M G+ N VTY LI+G CS G++D ++LQ ME+S
Sbjct: 266 AMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENS-------------- 311
Query: 315 LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L P S+ I C V +A+ +I++G
Sbjct: 312 ---------------------GLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKV 350
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
N ++Y LI C+ R A LM+ + G++P A T+++++ GLCRQ + A+ LV
Sbjct: 351 NEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM-LV 409
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+DM + +G P Y+ +I L + G + +L +M+ GI PD T+
Sbjct: 410 LDDM--MEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYT 461
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 201/460 (43%), Gaps = 30/460 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + + G RA ++ + L+ + + ++L L +
Sbjct: 105 PDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSV 164
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M A G D + YA ++ GLC R + LL + G +PN V+YN LI C
Sbjct: 165 FAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCN 224
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A + M+ PN T++ LI +CK L A++L + G VP+VVT
Sbjct: 225 VGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVT 284
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ CS G++ A R L+ ME G +PN T ++LI
Sbjct: 285 YTALIQGQCSDGQLDCAY-------------------RLLQSMENSGLVPNEWTCSVLID 325
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ + A + + GI N + Y +LI GLC GR +++Q + +G
Sbjct: 326 ALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL--VSQGF 383
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKR 362
Y+S++ GL R+ + EA+ L M EK + P V ++ I + + +K+
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
D+MI G P+V Y + +YC E R+ +A +M M HG P T+N + +C
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNAL---IC 500
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
N+G + + G P Y+ L++ L +K
Sbjct: 501 GYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKK 540
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 229/531 (43%), Gaps = 51/531 (9%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLA 64
PD ++ T++ GL GR R ++ +D ++ P++ ++N+++D D++LA
Sbjct: 175 PDPHVYATMVHGLCGAGRTREAETLL--SDAMAE-GFEPNVVVYNALIDGYCNVGDLELA 231
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ ++M +G + TY L+ G C + ++ L M G+ PN V Y LI
Sbjct: 232 VDVF-ERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQ 290
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
C +G++ A L+ ME PN+ T S+LI A CK E + A +LL G
Sbjct: 291 GQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKV 350
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FL 224
+ + T +++ LC GR A +++ QG + + G CR L
Sbjct: 351 NEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVL 410
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+M KG P+ TY I+I D + + + M GI + TY +R C
Sbjct: 411 DDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHE 470
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR++D ++ M D G + YN+++ G +A K M + +
Sbjct: 471 GRMEDAEHMMLHMVD--HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEE 528
Query: 345 SLKIL---------GFCVDGN------VEDAKRC---FDQMIEEGGVPNVVIYDCLIHAY 386
S +L + N + + K ++M++ + IY+C + +
Sbjct: 529 SYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSL 588
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ +R+ EA L+ EM P + ++++ CR + AL V+ ++ G +
Sbjct: 589 CRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS---GYI 645
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P Y +I +LCE+G Q+A + M+ K + + W L+ L Q+
Sbjct: 646 PQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQK 696
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 184/412 (44%), Gaps = 36/412 (8%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
N + +L ++ + S S M N T++ LI AYC +L + L GF
Sbjct: 45 NAFLMALARHRMLADMESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFA 104
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T + C R G + CR M +GC+ TY
Sbjct: 105 PDSHAYTSFVVGYC-------------------RAGLLAHACRLFVLMPLRGCVRTAFTY 145
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ C G++ A+ VF M+ DG + + Y T++ GLC GR + +L +
Sbjct: 146 TALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLS--DA 203
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNV 357
EG + + YN+++ G + A++ ++M+ P + I GFC +
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A F +M++ G VPNVV Y LI C + ++ A L++ M G +P T + +
Sbjct: 264 DRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVL 323
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ LC+ VG A L+ I +G Y+ LI LC+ G F +A L+ +V
Sbjct: 324 IDALCKHERVGEAQLLLGS---LIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380
Query: 478 KGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM--------VSFVMVVHEL 519
+G +PD T++SL+ +C ++ + +L+L + M V++ +++ EL
Sbjct: 381 QGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 224/499 (44%), Gaps = 50/499 (10%)
Query: 27 INDVVKATDLVSRFNM---TPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDY 82
+ D+ A D+ R ++ +P+++ + ++ K +D A + +M+ +G+ +
Sbjct: 225 VGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLF-SRMVDAGLVPNVV 283
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L++G C ++ ++LL M++ G+ PN + LI +LCK+ +VG A+ L+ +
Sbjct: 284 TYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSL 343
Query: 143 EEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ N++ ++ LI CK A L++ S GFVPD T + +++ LC +
Sbjct: 344 IQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKEL 403
Query: 199 MDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+A+ +L++ E+G R G + L +M G P+V TY I
Sbjct: 404 SEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIF 463
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM----- 297
+ SYC G ++ A + M G+ N VTY+ LI G + G + M
Sbjct: 464 VRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGC 523
Query: 298 ---EDS---------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPRAVD- 343
E+S K+ S I P NSV +++ + L++M KL P +D
Sbjct: 524 KPNEESYTVLLRLLIKKESSNNI-PANSV--SIWKIAEMKYLHGLLEEMVKLQLPSEIDI 580
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ + C +++AK +M P+ +Y +I C+ + + EA + M
Sbjct: 581 YNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMV 640
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
GY+P ++ ++S LC +G++ TA K V DM + + + LI L +KG
Sbjct: 641 KSGYIPQLESYRHIISSLCEEGSIQTA-KQVFGDM--LSKEYNYEEIAWRILIDGLLQKG 697
Query: 464 GFQSASMLLVQMVGKGILP 482
S LL M K P
Sbjct: 698 YVAECSSLLSVMEEKNYRP 716
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 145/327 (44%), Gaps = 36/327 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I GL R + +++ + D + + PS + I+D LV+E
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+A+G++ D +TY I ++ C R+ D ++ M GV PN V YN LI
Sbjct: 445 LDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYAN 504
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEE-------NLVNALVLLEKSFSFG 177
G +A S M +PN+ ++++L+ K+E N V+ + E + G
Sbjct: 505 LGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHG 564
Query: 178 FVPDVVTITKVLEL---------LCSVGRVMDAVEILEESGEQG---------------- 212
+ ++V + E+ LC V R+ +A +L E
Sbjct: 565 LLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCC 624
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
RL + F+ M + G +P +++Y +ISS CE G + +A VF DM ++ +
Sbjct: 625 RLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEI 684
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMED 299
+ LI GL G + + +L +ME+
Sbjct: 685 AWRILIDGLLQKGYVAECSSLLSVMEE 711
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 204/430 (47%), Gaps = 30/430 (6%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGD 80
L R +IN +V+ S+ ++ S IF +++ VK + A KM D
Sbjct: 171 LTRNTLINALVRYP---SKPSVCLSKAIFTNVIKFGVKNKLSEAIGLI-GKMKDFSCFPD 226
Query: 81 DYTYAILMK--GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL 138
+ +Y ++ LC + + L+ + G+ P+ + YNT+IH C+ G+V +A
Sbjct: 227 NASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQF 286
Query: 139 MSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+ M E P+ T +IL+ C E L NAL L S G D VT ++ LC
Sbjct: 287 RNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 346
Query: 195 VGRVMDAVEILEESGEQ-----------------GRLGKVKGGCRFLKEMERKGCLPNVD 237
GR +A ++L E E+ G+V+ +F +M K P++
Sbjct: 347 EGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLF 406
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T NIL+ C G+LD+AL +FN G + + VTY+T+I GLC GR ++ +L M
Sbjct: 407 TCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 466
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDG 355
E+ K G + YN+++ G RE Q ++A ++ +M EK F P ++ + G C +G
Sbjct: 467 EE-KNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREG 525
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ A + F+ I +G + V Y+ +I C+E R EA +L+ EM P T+N
Sbjct: 526 MLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYN 585
Query: 416 TVLSGLCRQG 425
+L L G
Sbjct: 586 AILCALADAG 595
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 217/455 (47%), Gaps = 65/455 (14%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILI 154
NR ++ + MK +KPN + NTLI++L + + +S N + F +
Sbjct: 149 NRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYP--SKPSVCLSKAIFTNVIKFGV-- 204
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL--CSVGRVMDAVEILEESGEQG 212
+ L A+ L+ K F PD + +L++L C G+ +++ L E E G
Sbjct: 205 -----KNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESG 259
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R G+V+ +F +M K P++ T NIL+ C G+LD+AL
Sbjct: 260 LVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL 319
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+FN G + + VTY+T+I GLC GR ++ +L ME+ K G YN++L
Sbjct: 320 KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPD--CYTYNAILC 377
Query: 317 GLY-RENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
L E Q ++A ++ +M EK F P ++ + G C +G +++A + F+ I +G
Sbjct: 378 ALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKA 437
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEM-TGHGYLPIASTFNTVLSGLCRQGNVGTAL- 431
+ V Y+ +I C+E R EA +L+ EM +G +P +T+NT++ G CR+G V A
Sbjct: 438 IDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQ 497
Query: 432 ---KLVEED-----------MRG-----------------IGRGSLPGSGHYSPLIKALC 460
K+VE+ +RG I +G + Y+ +I LC
Sbjct: 498 FRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLC 557
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
++G F+ A LL +M K + PD T+N++L L+
Sbjct: 558 KEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALA 592
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 168/359 (46%), Gaps = 40/359 (11%)
Query: 9 PDESIFITV--IRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PD + + T+ + L R+ + + + + + P +N+I+ +E + +A
Sbjct: 225 PDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREG-QVEKA 283
Query: 67 F-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F +R KM+ + D +T IL++GLC + + KL + S+G ++V YNT+I
Sbjct: 284 FQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISG 343
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF----- 176
LCK G+ A L+++MEE P+ T++ ++CA E V EK+F F
Sbjct: 344 LCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQV------EKAFQFRNKMV 397
Query: 177 --GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVK 218
F PD+ T +L LC+ G + +A+++ +G+ G+ +
Sbjct: 398 EKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFE 457
Query: 219 GGCRFLKEMERK-GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
L EME K G +P+ TYN +I YC G ++ A N M + T + L
Sbjct: 458 EAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNIL 517
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
+RGLC G + LK+ +G YN+++ GL +E + +EA + L +M++
Sbjct: 518 LRGLCREGMLVKALKLFNTW--ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKE 574
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 25/285 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-Y 68
D + T+I GL + + + + P +N+IL L + + +AF +
Sbjct: 333 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQF 392
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R KM+ + D +T IL++GLC + + KL + S+G ++V YNT+I LCK
Sbjct: 393 RNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCK 452
Query: 129 NGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+++MEE P+ T++ +I YC+E + A K F PD+
Sbjct: 453 EGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLF 512
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L LC G ++ A+++ +G+ + TYN +I
Sbjct: 513 TCNILLRGLCREGMLVKALKLFNTWISKGK-------------------AIDAVTYNTII 553
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
S C+ G + A D+ +MK + + TY+ ++ L GR++
Sbjct: 554 SGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 121/260 (46%), Gaps = 28/260 (10%)
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +Y A +FN MK + N +T +TLI L +
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALV------------------RY 183
Query: 303 GSKGRISPYNSVLYGLYR---ENQQDEALEYLKQMEKL--FP--RAVDRSLKILGFCVDG 355
SK + ++ + + +N+ EA+ + +M+ FP + + L +L C G
Sbjct: 184 PSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSG 243
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ + ++++E G VP+ + Y+ +IH YC+E +V +A + +M + P T N
Sbjct: 244 KTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCN 303
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+L GLC +G + ALKL I +G + Y+ +I LC++G F+ A LL +M
Sbjct: 304 ILLRGLCTEGMLDNALKLFNT---WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 360
Query: 476 VGKGILPDYLTWNSLLICLS 495
K + PD T+N++L L+
Sbjct: 361 EEKKLGPDCYTYNAILCALA 380
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 20/256 (7%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTL--IRGLCSGGRIDDGL-KILQLMEDSKEGSKGRI 308
L A+ + MK + +Y+T+ + LC G+ D + K+ +L+E G
Sbjct: 208 LSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLES---GLVPHQ 264
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN++++G RE Q ++A ++ +M EK F P ++ + G C +G +++A + F+
Sbjct: 265 ITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNT 324
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC-RQG 425
I +G + V Y+ +I C+E R EA +L+ EM P T+N +L L +G
Sbjct: 325 WISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEG 384
Query: 426 NVGTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
V A K+VE+ + P + L++ LC +G +A L + KG
Sbjct: 385 QVEKAFQFRNKMVEKSFK-------PDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKA 437
Query: 482 PDYLTWNSLLICLSQQ 497
D +T+N+++ L ++
Sbjct: 438 IDAVTYNTIISGLCKE 453
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD++ + T+I G R + + + + + P L N +L L +E + +
Sbjct: 474 PDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKL 533
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G D TY ++ GLC R + F LL MK + + P+ YN ++ +L
Sbjct: 534 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALAD 593
Query: 129 NGKVGRARSLMSDM 142
G++ A MS +
Sbjct: 594 AGRM-EAEEFMSKI 606
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY--CQEERVREASELMKEMTGH 405
++ F V + +A +M + P+ Y+ ++ C+ + ++ + + E+
Sbjct: 199 VIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLES 258
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
G +P T+NT++ G CR+G V A K+VE+ + P + L++ LC
Sbjct: 259 GLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFK-------PDLFTCNILLRGLCT 311
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G +A L + KG D +T+N+++ L ++
Sbjct: 312 EGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKE 347
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 39/499 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + TV+ GL R + + D V ++ PS+ FNSI+ K +D+A++F+
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ Y++ IL+ GLCL + + +L M GV+P+SV YN L
Sbjct: 246 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVV 183
G + A ++ DM + P+ +T++IL+C C+ N+ LVLL+ S GF + ++
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC GR+ +A+ + +M+ G P++ Y+I+I
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLF-------------------NQMKADGLSPDLVAYSIVI 405
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G D AL ++++M I N T+ L+ GLC G + + +L + S G
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS--G 463
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN V+ G + +EALE K + + + P + I G+C N+ +A+
Sbjct: 464 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 523
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D + G P+VV Y L+ AY + EL +EM G P T++ + GL
Sbjct: 524 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 583
Query: 422 CR---QGNVGTAL--KLVEEDMRGI----GRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
CR N L ++ E+ +G+ G P Y+ +I+ LC A + L
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 473 VQMVGKGILPDYLTWNSLL 491
M + + T+N L+
Sbjct: 644 EIMKSRNLDASSATYNILI 662
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 219/491 (44%), Gaps = 68/491 (13%)
Query: 23 RARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQGD 80
R RM++D + + N+ S + +NS+L + D D+ + K +
Sbjct: 136 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK---------N 186
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
++TY+ ++ GLC ++ D L + + + P+ V +N+++ CK G V A+S
Sbjct: 187 EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 141 DMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
++L C G VP V + ++ LC VG + +
Sbjct: 247 ----------TVLKC---------------------GLVPSVYSHNILINGLCLVGSIAE 275
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A+E+ + + G LG + G +++M KG P+V TY IL+
Sbjct: 276 ALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC 335
Query: 245 SYCETGVLDSALDVFNDMKIDGISWN-FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G +D L + DM G N + ++ GLC GRID+ L + M+ +G
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK--ADG 393
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y+ V++GL + + D AL +M +++ P + +LG C G + +A+
Sbjct: 394 LSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEAR 453
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
D +I G ++V+Y+ +I Y + + EA EL K + G P +TFN+++ G
Sbjct: 454 SLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGY 513
Query: 422 CRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C+ N+ A K+++ + G+ P Y+ L+ A G +S L +M +GI
Sbjct: 514 CKTQNIAEARKILDVIKLYGLA----PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Query: 481 LPDYLTWNSLL 491
P +T++ +
Sbjct: 570 PPTNVTYSVIF 580
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYC 247
++ D + +++ E V G CR FL+ E K P+V ++N ++S YC
Sbjct: 174 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G +D A F + G+ + +++ LI GLC G I + L++ + + +K
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL------ASDMNKHG 287
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ P +SV Y + + GF + G + A M
Sbjct: 288 VEP-DSVTYNILAK----------------------------GFHLLGMISGAWEVIRDM 318
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGN 426
+++G P+V+ Y L+ CQ + L+K+M G+ L + +LSGLC+ G
Sbjct: 319 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 378
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L + M+ G P YS +I LC+ G F A L +M K ILP+ T
Sbjct: 379 IDEALSLFNQ-MKADGLS--PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 487 WNSLLICLSQQ 497
+LL+ L Q+
Sbjct: 436 HGALLLGLCQK 446
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 153/386 (39%), Gaps = 46/386 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + VI GL + + + D + + P+ + ++L L ++ + L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++SG D Y I++ G + + + +L V+ G+ P+ +N+LI+ CK
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ AR ++ ++ P+ V+++ L+ AY N + L + + G P VT
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ + + LC + + +L E K K G L++ME +G P+ TYN +I
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRER----IFEKCKQG---LRDMESEGIPPDQITYNTIIQ 628
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C L A MK + + TY+ LI LC G I
Sbjct: 629 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-------------- 674
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+S +Y L +N Y + I CV G+ E A + F
Sbjct: 675 -------DSFIYSLQEQNVSLSKFAY--------------TTLIKAHCVKGDPEMAVKLF 713
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEE 390
Q++ G ++ Y +I+ C+
Sbjct: 714 HQLLHRGFNVSIRDYSAVINRLCRRH 739
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 6/161 (3%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARA 66
PPD+ + T+I+ L R + ++ +++ N+ S +N ++D L V I A +
Sbjct: 617 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 676
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + V + Y L+K C+ KL H + RG + Y+ +I+ L
Sbjct: 677 FIY-SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Query: 127 CK----NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENL 163
C+ N G++ + + + ++ A C+ L
Sbjct: 736 CRRHLMNCFPGQSNGVCCLISNERSFVYCPILSANCRRHTL 776
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 233/522 (44%), Gaps = 47/522 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P +F + L M + ++ + R + P + N +L + D + F
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K M+ +G + +TY I++ +C + L MK RG+ P++V YN++I
Sbjct: 121 F-KDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYG 179
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ +M+ EP+ +T++ LI +CK L L + G P+VV
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVV 239
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ + +++ C + A+ +F +M R G +PN TY L+
Sbjct: 240 SYSTLVDAFCKEDMMQQAL-------------------KFYVDMRRLGLVPNEHTYTSLV 280
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+YC+ G L A + ++M G+ WN VTY LI GLC RI + ++ M + G
Sbjct: 281 DAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTA--G 338
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG-----FCVDGNVE 358
++ Y ++++G + D ALE L +M+ R + L + G C +E
Sbjct: 339 VIPNLASYTALIHGFVKAKNMDRALELLDEMKG---RGIKPDLLLYGTFIWSLCGLEKIE 395
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
AK ++M E+G N IY L+ AY + E E L++EM A TF ++
Sbjct: 396 AAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLI 455
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGR-----GSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
GLC+ KLV + + GR G + Y+ +I LC++ ++A+ L
Sbjct: 456 DGLCKN-------KLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFE 508
Query: 474 QMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMV 515
QM KG++PD + SL+ +Q + L L + ++ + V
Sbjct: 509 QMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
VP ++D L +E+ EA + +M P + N +L R G +K
Sbjct: 60 VPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKT-DGMK 118
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+DM IG GS P Y+ +I +C++G ++AS L +M +G++PD +T+NS++
Sbjct: 119 RFFKDM--IGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMI 175
>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g55840-like [Cucumis sativus]
Length = 1079
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 237/508 (46%), Gaps = 37/508 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ S F +I L + V ++ R P++ +N++L K+
Sbjct: 173 PNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVL 232
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G+Q D TY + + LC +R G+ +L M+++ + PN V YNTLI+ K
Sbjct: 233 IHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVK 292
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+G A + ++M E PN +T++ILI YC N AL LL+ + P+ VT
Sbjct: 293 EGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVT 352
Query: 185 ITKVLELLCSVGRVMDAVEILEE-SGEQGRLG------KVKGGCR---------FLKEME 228
I +L L + A ILE S + L + G CR L EM
Sbjct: 353 IGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMC 412
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G P++ T+++LI+ +C+ G L+ A +V + + +G N V + TLI C G +
Sbjct: 413 KDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVY 472
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+G+K M + G NS++ L + EA E+L + + L P +V
Sbjct: 473 EGMKFYAAM--NLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDC 530
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+ G+ A FD+MI G P+ Y L+ C+ + EA +L+K++
Sbjct: 531 IINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC-- 588
Query: 407 YLPIAS---TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
+P+A ++NT++ + + GN+ A++L EE I LP S Y+ ++ L +G
Sbjct: 589 -IPLAVDTISYNTLIVEISKSGNLLEAVRLFEE---MIQNNILPDSYTYTCILSGLIREG 644
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
A + L +++ K I LT NS++
Sbjct: 645 RLVCAFIFLGRLMQKEI----LTLNSIV 668
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 232/520 (44%), Gaps = 35/520 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFY 68
+ ++F +IR R M+ V + PS+ N I+ +VK L F+
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M+ S V + ++ IL+ LC+ ++ +L +M+ G P V YNTL+ CK
Sbjct: 164 -KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCK 222
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ A L+ ME + + T+++ I + C+ ++L+K + P+ V+
Sbjct: 223 KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVS 282
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ G V + GK+ R EM PN+ TYNILI+
Sbjct: 283 YNTLIN-----GFVKE--------------GKIGVATRVFNEMIELNLSPNLITYNILIN 323
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC G + AL + + M+ + + N VT TL+ GL + D IL+ ++ S
Sbjct: 324 GYCINGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRT-S 382
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
IS + ++ GL R DEA + L +M K ++P + S+ I GFC GN+ AK
Sbjct: 383 LNCIS-HTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKE 441
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
++ EG VPN VI+ LI+ C+ V E + M +G T N++++ LC
Sbjct: 442 VMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLC 501
Query: 423 RQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
G + A EE + I R G +P S + +I G A + +M+ G
Sbjct: 502 ENGKLVEA----EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHH 557
Query: 482 PDYLTWNSLLICLSQ-QTTWLLLLLLNEMVSFVMVVHELS 520
P T+ SLL L + Q W LL ++ + V +S
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 214/480 (44%), Gaps = 32/480 (6%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTN 95
+SR + P+ F+ I++ D + AF KM++ G +TY L+K LC
Sbjct: 516 ISRIGLVPNSVTFDCIINGYANVG-DGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQ 574
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
+ KLL + + +++ YNTLI + K+G + A L +M + P+ T++
Sbjct: 575 NFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYT 634
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVP-DVVTITKVLELLCSVGRVMDAVEILEESGE 210
++ +E LV A + L + + + + T ++ L G+ A+ + +E E
Sbjct: 635 CILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEE 694
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
+G R+GKV + + K +PN+ T+NIL+ Y + S
Sbjct: 695 KGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMS 754
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
++N M+ G N +TY +LI GLC+ G ++ G+K+L++ E S +N +
Sbjct: 755 CFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMF--IAESSTIDDLTFNML 812
Query: 315 LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK--ILGFCVDGNVEDAKRCF-DQMIEEG 371
+ N D+ ++ ME +F ++D+ + + V V F +M+++G
Sbjct: 813 IRKCCEINDLDKVIDLTHNME-VFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKG 871
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+P Y ++ C+ ++ A +L +M G + ++ GL G + A+
Sbjct: 872 FIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAM 931
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+++ +R +P + ++ L+ C+K F+ A L + M + D + +N L+
Sbjct: 932 WILQRMLR---MKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLI 988
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 149/330 (45%), Gaps = 27/330 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK----VGRARSL 138
T+ IL+ G + FKL ++M+ G PN + Y++LI LC +G + +
Sbjct: 738 TFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMF 797
Query: 139 MSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+++ +D+TF++LI C+ +L + L F D T V ++L V R+
Sbjct: 798 IAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVL--VRRM 855
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ + F+ EM +KG +P Y ++ C G + A +
Sbjct: 856 VSQNYFV-----------------FMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKL 898
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+ M GIS + ++RGL G+I++ + ILQ M K+ S + ++++
Sbjct: 899 KDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPT--TSTFTTLMHVF 956
Query: 319 YRENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+++ EA L+ L + ++ V ++ I C +G+V A ++++ ++G +PN+
Sbjct: 957 CKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNM 1016
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHG 406
Y L+ A + V ++K++ G
Sbjct: 1017 TTYRVLVSAISTKHYVSRGEIVLKDLNDRG 1046
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 39/252 (15%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSR---FNMTPSLKIFNSILDVLVKEDID 62
S D+ F +IR + IND+ K DL F ++ ++ DVLV+ +
Sbjct: 801 SSTIDDLTFNMLIR---KCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVS 857
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD---GFKLLHVMKSRGVKPNSVIY 119
+ +M+ G Y +MK +C RVGD FKL M + G+ +
Sbjct: 858 QNYFVFMHEMLKKGFIPTSKQYCTMMKRMC---RVGDIQGAFKLKDQMVALGISLDDAAE 914
Query: 120 NTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNA--LVLLEKS 173
++ L GK+ A ++ M + P TF+ L+ +CK++N A L +L +
Sbjct: 915 CAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEH 974
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ D+V ++ C+ G V+ A++ F +E+++KG L
Sbjct: 975 YRVKL--DIVAYNVLISACCANGDVITALD-------------------FYEEIKQKGLL 1013
Query: 234 PNVDTYNILISS 245
PN+ TY +L+S+
Sbjct: 1014 PNMTTYRVLVSA 1025
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 137/353 (38%), Gaps = 74/353 (20%)
Query: 22 GRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGV 77
G +RM V A+ L+S+ N+ P+L FN +L + +DI Y M SG
Sbjct: 710 GYSRM-GKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLY-NLMRRSGF 767
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ TY L+ GLC + G K+L + + + + +N LI C+ + +
Sbjct: 768 FPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVID 827
Query: 138 LMSDME--------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
L +ME + +L+ + N V + + GF+P ++
Sbjct: 828 LTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQ----NYFVFMHEMLKKGFIPTSKQYCTMM 883
Query: 190 ELLCSVGRVMDAVEI----------LEESGEQGRL------GKVKGGCRFLKEMERKGCL 233
+ +C VG + A ++ L+++ E + GK++ L+ M R +
Sbjct: 884 KRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKI 943
Query: 234 PNVDT-----------------------------------YNILISSYCETGVLDSALDV 258
P T YN+LIS+ C G + +ALD
Sbjct: 944 PTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDF 1003
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ ++K G+ N TY L+ + + + G +L+ + D +G +S Y
Sbjct: 1004 YEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLND-----RGLVSGY 1051
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 156/543 (28%), Positives = 231/543 (42%), Gaps = 88/543 (16%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDI-DLAR 65
E FI + + G+A + KA DL R F ++K FNS+L+V+V+E + + A
Sbjct: 96 EKNFIVMFKAYGKAHLPE---KAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRAL 152
Query: 66 AFYR---------------------KKMMASGV----------------QGDDYTYAILM 88
FY K M G+ D+YTY+ LM
Sbjct: 153 EFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLM 212
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----E 144
GLC R+ + LL M+ G PN V +N LI +LCK G +GRA L+ +M
Sbjct: 213 HGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCV 272
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN+VT++ L+ C + L A+ LL + S VP+ VT ++ GR D +
Sbjct: 273 PNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRV 332
Query: 205 ---LEESGEQG-------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
LE G +G + GK KEM KGC PN Y+ LI C
Sbjct: 333 LVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCR 392
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G LD A ++MK G N TY +L+RG G D IL E +
Sbjct: 393 EGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAG--DSHKAILVWKEMANNNCIHNE 450
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y+ ++ GL ++ + EAL KQM + V S I GFC VE + F+Q
Sbjct: 451 VCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQ 510
Query: 367 MIEEGGV--PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
M+ +G V P+V+ Y+ L++A+C ++ + A +++ M G P T +
Sbjct: 511 MLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIF------- 563
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
LK + E+M G L+ L ++ AS ++ M+ K +LP
Sbjct: 564 ------LKTLRENM----NPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKA 613
Query: 485 LTW 487
TW
Sbjct: 614 STW 616
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 199/453 (43%), Gaps = 52/453 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T++ GL + I++ V D + P+L FN ++ L K+ DL RA
Sbjct: 203 PDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKG-DLGRAAK 261
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G ++ TY L+ GLCL ++ LL+ M S PN V + TLI+
Sbjct: 262 LVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFV 321
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ ++ +E N+ +S LI CKE A+ L ++ G P+ +
Sbjct: 322 MQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTI 381
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +++ LC +G+L + +G FL EM+ KG LPN TY+ L+
Sbjct: 382 VYSALIDGLC----------------REGKLDEARG---FLSEMKNKGYLPNSFTYSSLM 422
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
Y E G A+ V+ +M + N V Y LI GLC G+ + L + + M G
Sbjct: 423 RGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQM--LSRG 480
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDRSLKILGFCVDGNVED 359
K + Y+S+++G N ++ L+ QM + P + ++ + FC+ ++
Sbjct: 481 IKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFR 540
Query: 360 AKRCFDQMIEEGGVPNVVIYDC---------------------LIHAYCQEERVREASEL 398
A + M+++G P+ + D L+ + +R AS++
Sbjct: 541 AIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKI 600
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
++ M LP AST+ V+ +C+ NV A+
Sbjct: 601 IEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAI 633
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 137/260 (52%), Gaps = 7/260 (2%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN T+N++I + C G++D A++VF ++ + + + TY TL+ GLC RID+ + +
Sbjct: 168 PNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSL 227
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
L M+ EG+ + +N ++ L ++ A + + M + P V + + G
Sbjct: 228 LDEMQ--VEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C+ G +E A +QM+ VPN V + LI+ + + R + + ++ + G+
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+++++SGLC++G A++L +E +G+G P + YS LI LC +G A
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKE---MVGKGCGPNTIVYSALIDGLCREGKLDEARGF 402
Query: 472 LVQMVGKGILPDYLTWNSLL 491
L +M KG LP+ T++SL+
Sbjct: 403 LSEMKNKGYLPNSFTYSSLM 422
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME-----KLFPRAVDRSLKILGFCVDGNVED 359
K + +NSVL + +E + ALE+ + + P A+ +L I C G V+
Sbjct: 129 KQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDK 188
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F ++ P+ Y L+H C+EER+ EA L+ EM G P FN ++S
Sbjct: 189 AIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLIS 248
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
LC++G++G A KLV+ +G +P Y+ L+ LC KG + A LL QMV
Sbjct: 249 ALCKKGDLGRAAKLVDNMFL---KGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK 305
Query: 480 ILPDYLTWNSLL 491
+P+ +T+ +L+
Sbjct: 306 CVPNDVTFGTLI 317
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 216/483 (44%), Gaps = 48/483 (9%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G D +Y L+ GLC +LL + + V+ + V+Y+T+I S+C
Sbjct: 162 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC 221
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A L S+M N VT+S LI +C L +A+ L K S PDV
Sbjct: 222 KDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVY 281
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T +++ C GRV +A L +QG + +V L M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G V +YNI+I+ +C+ ++D A+ +F +M I N +TY++LI GLC GRI
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
L+++ LM D G + I Y+S+L L + + D+A+ L ++ + + P +
Sbjct: 402 SYALELIDLMHD--RGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYT 459
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C G +EDA+ F+ ++ +G V Y +I +C EA L+ +M +
Sbjct: 460 ILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDN 519
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+P A T+ ++ L + A KL+ E I RG L+ + E G +
Sbjct: 520 SCIPDAITYEIIICSLFDKDENDKAEKLLRE---MITRG----------LLYSFLEYGSW 566
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT--WLLLLLLNEMVSFVMVVHELSAKE 523
+ M P + N L C S Q + W LLL V+ + K+
Sbjct: 567 SLSFM---------AAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKD 617
Query: 524 KRC 526
C
Sbjct: 618 VEC 620
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 225/493 (45%), Gaps = 32/493 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+PPD F ++ L +++ + V+ + + P+ FN +++ + +
Sbjct: 67 TPPDME-FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAF 125
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K++ G + D T +KG CL ++ + + G + V Y TLI+ L
Sbjct: 126 SVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGL 185
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+ A L+ ++ + + V +S +I + CK++N+ +A L + S ++
Sbjct: 186 CKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNI 245
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT + ++ C VG++ DA+ + +M + P+V T+NIL
Sbjct: 246 VTYSALISGFCIVGKLKDAIGLFN-------------------KMTSENINPDVYTFNIL 286
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ ++C+ G + A + M GI + VTY++L+ G C ++ IL M S
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM--SHR 344
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + YN V+ G + D+A++ K+M +++FP + + I G C G + A
Sbjct: 345 GVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYA 404
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
D M + G P+++ Y ++ A C+ V +A L+ ++ G P T+ ++ G
Sbjct: 405 LELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDG 464
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC+ G + A + E+ + +G Y+ +I+ C G F A LL +M
Sbjct: 465 LCKGGRLEDARNIFEDLLV---KGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSC 521
Query: 481 LPDYLTWNSLLIC 493
+PD +T+ ++IC
Sbjct: 522 IPDAITY-EIIIC 533
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 190/440 (43%), Gaps = 39/440 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ +I G + D + + ++ N+ P + FN ++D KE MM
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G++ D TY LM G CL N V +L+ M RGV YN +I+ CK V
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A L +M PN +T++ LI CK + AL L++ G PD++T + +L
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSIL 427
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ LC V A+ +L + +QG PN+ TY ILI C+
Sbjct: 428 DALCKNHLVDKAIALLIKLKDQG-------------------IRPNMYTYTILIDGLCKG 468
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G L+ A ++F D+ + G + TY +I+G CS G D+ L +L M+D+
Sbjct: 469 GRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA--I 526
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEKL-----FPRAVDRSLKILGFCVDGNVEDAKRCF 364
Y ++ L+ +++ D+A + L++M F SL + D+ +C
Sbjct: 527 TYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCT 586
Query: 365 DQMIEEGGVPNVV---IY-DCLIHAYCQEERVREASELMK----EMTGHGYLPIASTFNT 416
E G ++ IY DC++ ++ E ++ + + GY+ +T+
Sbjct: 587 SSQ-ESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTV 645
Query: 417 VLSGLCRQGNVGTALKLVEE 436
++ G C G +L L+ +
Sbjct: 646 MIQGFCSHGLFDESLALLSK 665
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 193/431 (44%), Gaps = 39/431 (9%)
Query: 138 LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
L+ P D+ F ++ + K ++ L L +K G P+ V ++ C +G
Sbjct: 61 LLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGL 120
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+ A +L + + + G P+ T N I +C G + AL+
Sbjct: 121 IPFAFSVLAK-------------------ILKMGYEPDTITLNTFIKGFCLKGQIHQALN 161
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ + G + V+Y TLI GLC G L++L+ ++ + + + Y++++
Sbjct: 162 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDG--KLVQLDVVMYSTIIDS 219
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+ ++ ++A + +M ++ V S I GFC+ G ++DA F++M E P+
Sbjct: 220 MCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPD 279
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V ++ L+ A+C+E RV+EA + M G P T+N+++ G C V A ++
Sbjct: 280 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILN 339
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
RG Y+ +I C+ A L +M K I P+ +T+NSL+ +C
Sbjct: 340 TMSH---RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLC 396
Query: 494 LSQQTTWLLLL--LLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWL-----GLR 546
S + ++ L L L+++ ++ S + CK NHL A ++ + G+R
Sbjct: 397 KSGRISYALELIDLMHDRGQQPDIITYSSILDALCK----NHLVDKAIALLIKLKDQGIR 452
Query: 547 IHDTTHTFIID 557
+ T+T +ID
Sbjct: 453 PNMYTYTILID 463
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 32/304 (10%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-I 61
H Q P+ + ++I GL ++ I+ ++ DL+ P + ++SILD L K +
Sbjct: 377 HHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLV 436
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A A K + G++ + YTY IL+ GLC R+ D + + +G Y
Sbjct: 437 DKAIALLIK-LKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+I C +G A SL+S M++ P+ +T+ I+IC+ ++ A LL + + G
Sbjct: 496 MIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555
Query: 178 FVPDVVTI-TKVLELLCSVGRVM--DAVEIL--EESGEQGRL--GKVKGGCRFLK----- 225
+ + + L + + + D+++ +ESG +L ++ C K
Sbjct: 556 LLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRD 615
Query: 226 --------------EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ ++G + +V+TY ++I +C G+ D +L + + M+++G +
Sbjct: 616 KDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDA 675
Query: 272 VTYD 275
VTYD
Sbjct: 676 VTYD 679
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 39/499 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + TV+ GL R + + D V ++ PS+ FNSI+ K +D+A++F+
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ Y++ IL+ GLCL + + +L M GV+P+SV YN L
Sbjct: 288 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 346
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVV 183
G + A ++ DM + P+ +T++IL+C C+ N+ LVLL+ S GF + ++
Sbjct: 347 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 406
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC GR+ +A+ + +M+ G P++ Y+I+I
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLF-------------------NQMKADGLSPDLVAYSIVI 447
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G D AL ++++M I N T+ L+ GLC G + + +L + S G
Sbjct: 448 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS--G 505
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN V+ G + +EALE K + + + P + I G+C N+ +A+
Sbjct: 506 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 565
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D + G P+VV Y L+ AY + EL +EM G P T++ + GL
Sbjct: 566 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 625
Query: 422 CR---QGNVGTAL--KLVEEDMRGI----GRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
CR N L ++ E+ +G+ G P Y+ +I+ LC A + L
Sbjct: 626 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 685
Query: 473 VQMVGKGILPDYLTWNSLL 491
M + + T+N L+
Sbjct: 686 EIMKSRNLDASSATYNILI 704
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 218/489 (44%), Gaps = 68/489 (13%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQG 79
R RM++D + + N+ S + +NS+L + D D+ + K
Sbjct: 177 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK--------- 227
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+++TY+ ++ GLC ++ D L + + + P+ V +N+++ CK G V A+S
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
++L C G VP V + ++ LC VG +
Sbjct: 288 C----------TVLKC---------------------GLVPSVYSHNILINGLCLVGSIA 316
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A+E+ + + G LG + G +++M KG P+V TY IL+
Sbjct: 317 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 376
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWN-FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ G +D L + DM G N + ++ GLC GRID+ L + M+ +
Sbjct: 377 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK--AD 434
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + Y+ V++GL + + D AL +M +++ P + +LG C G + +A
Sbjct: 435 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 494
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ D +I G ++V+Y+ +I Y + + EA EL K + G P +TFN+++ G
Sbjct: 495 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 554
Query: 421 LCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C+ N+ A K+++ + G+ P Y+ L+ A G +S L +M +G
Sbjct: 555 YCKTQNIAEARKILDVIKLYGLA----PSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 610
Query: 480 ILPDYLTWN 488
I P +T++
Sbjct: 611 IPPTNVTYS 619
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYC 247
++ D + +++ E V G CR FL+ E K P+V ++N ++S YC
Sbjct: 216 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 275
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G +D A F + G+ + +++ LI GLC G I + L++ + + +K
Sbjct: 276 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL------ASDMNKHG 329
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ P +SV Y + + GF + G + A M
Sbjct: 330 VEP-DSVTYNILAK----------------------------GFHLLGMISGAWEVIRDM 360
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGN 426
+++G P+V+ Y L+ CQ + L+K+M G+ L + +LSGLC+ G
Sbjct: 361 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 420
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L + M+ G P YS +I LC+ G F A L +M K ILP+ T
Sbjct: 421 IDEALSLFNQ-MKADGLS--PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 477
Query: 487 WNSLLICLSQQ 497
+LL+ L Q+
Sbjct: 478 HGALLLGLCQK 488
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 159/405 (39%), Gaps = 46/405 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + VI GL + + + D + + P+ + ++L L ++ + L
Sbjct: 438 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 497
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++SG D Y I++ G + + + +L V+ G+ P+ +N+LI+ CK
Sbjct: 498 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 557
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ AR ++ ++ P+ V+++ L+ AY N + L + + G P VT
Sbjct: 558 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 617
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ + + LC + + +L E K K G L++ME +G P+ TYN +I
Sbjct: 618 YSVIFKGLCRGWKHENCNHVLRER----IFEKCKQG---LRDMESEGIPPDQITYNTIIQ 670
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C L A MK + + TY+ LI LC G I
Sbjct: 671 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-------------- 716
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+S +Y L +N Y + I CV G+ E A + F
Sbjct: 717 -------DSFIYSLQEQNVSLSKFAY--------------TTLIKAHCVKGDPEMAVKLF 755
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
Q++ G ++ Y +I+ C+ V E+ M G P
Sbjct: 756 HQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISP 800
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 8/175 (4%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARA 66
PPD+ + T+I+ L R + ++ +++ N+ S +N ++D L V I A +
Sbjct: 659 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 718
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + V + Y L+K C+ KL H + RG + Y+ +I+ L
Sbjct: 719 FIY-SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 777
Query: 127 CKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ V ++ M ++ + IC E ++ + LL + +G +PD
Sbjct: 778 CRRHLVNESKFFFCLMLSQG-ISPDLDIC-----EVMIKSDELLSWTIKWGLLPD 826
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 137/566 (24%), Positives = 233/566 (41%), Gaps = 96/566 (16%)
Query: 20 GLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED------------------- 60
L RAR ++D V A ++ R P+ + ++ L +
Sbjct: 153 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 212
Query: 61 -----IDLARAFYRKKMMASG------VQGDDYTYAILMKGLCL-----TNRVGDGFKLL 104
L RA R+ +A V+G I++ +C+ V +K
Sbjct: 213 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFF 272
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
H +K++G+KP+ V Y ++I LCK G++G A L + ME P ++ +I Y
Sbjct: 273 HELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSA 332
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV---EILEESGEQGRL--- 214
+A LLE+ G +P VV+ +L L +V +A+ E++++ E
Sbjct: 333 GRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYN 392
Query: 215 ---------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
G+V+ R L EME PN+ T NI++ C+ L+ A +F
Sbjct: 393 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 452
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + + VTY +LI GL G++D+ ++ + M D+ G Y S++ + +++
Sbjct: 453 GCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA--GHNANPVVYTSLIRNFFIHGRKE 510
Query: 326 EALEYLKQMEKLFPRAVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ + K+ L R L +L +D G VE + F+ + G +P+V Y
Sbjct: 511 DGHKIFKE---LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 567
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LIH + + RE S + M G+ A +N V+ G C+ G V A +++EE
Sbjct: 568 ILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627
Query: 441 IGRGSLPGSGH--------------------------------YSPLIKALCEKGGFQSA 468
+ ++ G YS LI + G A
Sbjct: 628 CVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEA 687
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICL 494
++L +M+ KG+ P+ TWNSLL L
Sbjct: 688 YLILEEMMKKGLTPNVYTWNSLLDAL 713
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 235/509 (46%), Gaps = 30/509 (5%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLA 64
+S P + T+I G G A D K + + PS+ FNSIL L K +D A
Sbjct: 314 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 373
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + ++M + + TY I++ LCL RV + +++L M+ + PN + N ++
Sbjct: 374 LSLF--EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 431
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK K+ A + + P+ VT+ LI K+ + A L EK G
Sbjct: 432 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 491
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ V T ++ GR D +I +E +G + G+V+ G
Sbjct: 492 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 551
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+++ G LP+V +Y+ILI + G ++F+ MK G + + Y+ ++ G C
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 611
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G++ +IL+ M++ + + ++ Y +++ GL + ++ DEA ++ + + V
Sbjct: 612 GKVHKAYEILEEMKE--KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
S I GF G +++A ++M+++G PNV ++ L+ A + E + EA + M
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P T++ +++GLCR A + +DM+ +G +P Y+ +I L +
Sbjct: 730 KEMKCPPNTYTYSILINGLCRVQKYNKAF-VFWQDMQ--KQGLVPNVVTYTTMISGLAKV 786
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A L + G +PD ++N+L+
Sbjct: 787 GNITDAYSLFERFKANGGIPDAASFNALI 815
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 197/448 (43%), Gaps = 31/448 (6%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE- 59
M H+ P ++ I V R L +AR + + K + S+ P + S++D L K+
Sbjct: 414 MEHASLFPNLLTVNIMVDR-LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 472
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A + +KM+ +G + Y L++ + R DG K+ + RG KP+ +
Sbjct: 473 QVDEAYRLF-EKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 531
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NT + + K G+V + R + D+ P+ ++SILI K +
Sbjct: 532 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 591
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
GF D V++ C G+V A EILEE M+ K P
Sbjct: 592 QGFALDARAYNAVVDGFCKSGKVHKAYEILEE-------------------MKEKCVQPT 632
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY ++ + LD A +F + K GI N V Y +LI G GRID+ IL+
Sbjct: 633 VATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILE 692
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCV 353
M K+G + +NS+L L + + +EAL + M+ K P S+ I G C
Sbjct: 693 EM--MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 750
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
A + M ++G VPNVV Y +I + + +A L + +G +P A++
Sbjct: 751 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 810
Query: 414 FNTVLSGLCRQGNVGTALKLVEED-MRG 440
FN ++ G+ A ++ EE +RG
Sbjct: 811 FNALIEGMSNANRAMEAYQVFEETRLRG 838
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 186/415 (44%), Gaps = 29/415 (6%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
A L L R+ D + VM+ +P Y LI +L + + RA L+ M+E
Sbjct: 148 AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQE 207
Query: 145 PNDVT----FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
F+ L+ A +E + +AL L+++ PD+V ++
Sbjct: 208 VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCF-------- 259
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
G+ G V +F E++ +G P+ +Y +I C+ G L A ++F
Sbjct: 260 -----------GKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M+ + Y+T+I G S GR +D K+L+ + + G + +NS+L L +
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRE--RGCIPSVVSFNSILTCLGK 366
Query: 321 ENQQDEALEYLKQMEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ + DEAL + M+K P + ++ I C+ G VE+A R D+M PN++
Sbjct: 367 KRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV 426
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ ++ C+ ++ EA ++ + + G P T+ +++ GL ++G V A +L E+ M
Sbjct: 427 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK-ML 485
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
G + P Y+ LI+ G + + +++ +G PD N+ + C+
Sbjct: 486 DAGHNANPVV--YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 538
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 12/312 (3%)
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D+ + KVLE + +G + + R ++ + M R P Y
Sbjct: 124 DLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYT 183
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+LI + E + AL++ M+ G + TL+R L G++ D L ++ D
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALV----DE 239
Query: 301 KEGS--KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+GS + I YN + + D A ++ +++ L P V + I C G
Sbjct: 240 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGR 299
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ +A+ F QM E VP Y+ +I Y R +A +L++ + G +P +FN+
Sbjct: 300 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 359
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+ L ++ V AL L E + + + P S Y+ +I LC G + A +L +M
Sbjct: 360 ILTCLGKKRKVDEALSLFEV----MKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEME 415
Query: 477 GKGILPDYLTWN 488
+ P+ LT N
Sbjct: 416 HASLFPNLLTVN 427
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++MM G+ + YT+ L+ L + + MK PN+ Y+ LI+ LC+
Sbjct: 692 EEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRV 751
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
K +A DM++ PN VT++ +I K N+ +A L E+ + G +PD +
Sbjct: 752 QKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASF 811
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
++E + + R M+A ++ EE+ +G +K L + + CL
Sbjct: 812 NALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECL 859
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 7/242 (2%)
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
V +M + G L L R+DD + + +M K + S Y ++
Sbjct: 131 VLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLK--FRPAFSAYTVLIGA 188
Query: 318 LYRENQQDEALEYLKQMEKL-FPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + + ALE L+QM+++ + V ++ +G V DA D++ P+
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+V+Y+ I + + V A + E+ G P ++ +++ LC+ G +G A +L
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
+ S+P + Y+ +I G F+ A LL ++ +G +P +++NS+L CL
Sbjct: 309 QME---AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLG 365
Query: 496 QQ 497
++
Sbjct: 366 KK 367
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 227/506 (44%), Gaps = 65/506 (12%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI-LMKGLCLTNRVGDGFK 102
P F S++ VKE ++A A K M + + + A LMKG C+ +
Sbjct: 226 PPEGTFTSVITACVKEG-NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 284
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
L++ + G+ PN V Y+ LI CKNG + +A S+M+ + + + ++ Y
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K ++ NA + + G + +V T +L LC G++ +A + +E +G
Sbjct: 345 KCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVV 403
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R + C+ KEM G PN T+ IL+ Y + G +++A +F+ M
Sbjct: 404 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 463
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLY 319
K I T +I+GLC GR +G + +K S+G + PYN+++ G
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLF-----NKFVSQGFVPTCMPYNTIIDGFI 518
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+E + A ++M + + P V + I GFC N++ A + + M +G ++
Sbjct: 519 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 578
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL----KL 433
Y LI +C+ ++ A EL+ E+ G G P +N++++G NV A+ K+
Sbjct: 579 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 638
Query: 434 VEE----DMRG------------------------IGRGSLPGSGHYSPLIKALCEKGGF 465
V E D++ + +G LP ++ LI LC KG F
Sbjct: 639 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 698
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
++A +L M GK ++P L +N+L+
Sbjct: 699 ENARKILEDMNGKNMIPSVLIYNTLI 724
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 215/467 (46%), Gaps = 30/467 (6%)
Query: 47 KIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
K++N LD+ ++ + F + K A GV+ D Y+I + LCL G LL
Sbjct: 161 KLYNFPLDIQEGNILEAEQHFLQAK--ARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE 218
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M++ G P + ++I + K G V A L DM + N + L+ YC + N
Sbjct: 219 MRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGN 278
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV----- 217
L +ALVL+ + G VP+ VT + +++ C G + A E E +G V
Sbjct: 279 LRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNS 338
Query: 218 -----------KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+ + G L NV T+N L+S C+ G ++ A ++++++ G
Sbjct: 339 ILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG 397
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
IS N V+Y+ +I G C I+ K+ + M D+ G + ++ G +++ +
Sbjct: 398 ISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN--GFTPNAVTFTILMDGYFKKGDIEN 455
Query: 327 ALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A +M+ D +L I+ G C G + + F++ + +G VP + Y+ +I
Sbjct: 456 AFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIID 515
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+ +E + AS + +EM G P T+ +++ G C+ N+ ALKL+ + R +G
Sbjct: 516 GFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR---KG 572
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y LI C++ +SA LL ++ G G+ P+ +NS++
Sbjct: 573 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMI 619
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 228/478 (47%), Gaps = 30/478 (6%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
+S + P+ ++ ++D K +I+ A FY +M G++ Y+ +++G
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY-SEMKTKGIRSSVYSLNSILEGYLKCQ 347
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFS 151
+ F + + G+ N +NTL+ LCK GK+ A +L ++ PN V+++
Sbjct: 348 SWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 406
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+I +C+++N+ A + ++ GF P+ VT T +++ G + +A I +
Sbjct: 407 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 466
Query: 212 GRLGK-------VKGGCRFLKEME---------RKGCLPNVDTYNILISSYCETGVLDSA 255
L +KG C+ + E +G +P YN +I + + G ++ A
Sbjct: 467 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 526
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+V+ +M GI+ + VTY +LI G C G ID LK+L M+ ++G K I Y +++
Sbjct: 527 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK--RKGLKMDIKAYGTLI 584
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G + A E L ++ L P + I GF NVE+A + +M+ EG
Sbjct: 585 DGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIP 644
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
++ Y LI + R+ AS++ EM G LP +++GLC +G A K+
Sbjct: 645 CDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKI 704
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ EDM G+ +P Y+ LI ++G Q A L +M+ +G++PD +T++ L+
Sbjct: 705 L-EDMN--GKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 192/414 (46%), Gaps = 29/414 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSI-LDVLVKEDIDLARAFYRKKM 72
F T++ L + +N+ D V ++P++ +N+I L K++I+ A Y K+M
Sbjct: 370 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY-KEM 428
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ +G + T+ ILM G + + F + H MK + P +I LCK G+
Sbjct: 429 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 488
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
R L + P + ++ +I + KE N+ A + + G P VT T +
Sbjct: 489 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 548
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ C + A+ + L +M+RKG ++ Y LI +C+
Sbjct: 549 IDGFCKGNNIDLAL-------------------KLLNDMKRKGLKMDIKAYGTLIDGFCK 589
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ SA ++ N+++ G+S N Y+++I G + +++ + + + M + EG +
Sbjct: 590 RRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN--EGIPCDL 647
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y S++ GL + + A + +M + + P ++ I G C G E+A++ +
Sbjct: 648 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 707
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M + +P+V+IY+ LI + +E ++EA L EM G +P T++ +++G
Sbjct: 708 MNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 28/300 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLA 64
P ++ +I+GL +A + DL ++F P+ +N+I+D +KE +I+LA
Sbjct: 470 PTDTTLGIIIKGLCKA---GRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 526
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
YR+ M G+ TY L+ G C N + KLL+ MK +G+K + Y TLI
Sbjct: 527 SNVYRE-MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 585
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK + A L++++ PN ++ +I + N+ A+ L +K + G
Sbjct: 586 GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPC 645
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFL 224
D+ T T +++ L GR++ A +I E +G L G+ + + L
Sbjct: 646 DLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL 705
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
++M K +P+V YN LI+ + + G L A + ++M G+ + +TYD L+ G G
Sbjct: 706 EDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 765
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 16/240 (6%)
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP---YNSVL 315
F K G+ + Y + LC L +L+ M + G I P + SV+
Sbjct: 181 FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMR-----AAGWIPPEGTFTSVI 235
Query: 316 YGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+E EAL M K AV SL + G+C+ GN+ A +++ E G
Sbjct: 236 TACVKEGNVAEALRLKDDMVNCGKSMNLAVATSL-MKGYCMQGNLRSALVLVNEISESGL 294
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
VPN V Y LI C+ + +A E EM G + N++L G + + A
Sbjct: 295 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 354
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ + + L ++ L+ LC++G A L +++ KGI P+ +++N++++
Sbjct: 355 MFNDALES----GLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIIL 410
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 230/506 (45%), Gaps = 28/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T I + + D V + + P++ +N+++D L K +
Sbjct: 253 PDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRF 312
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +M+ S V TY +L+ GL + ++L M S G PN V++N LI C+
Sbjct: 313 KDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCR 372
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +G A + +M +PN VTF+ L+ +C+ + A +L S G ++
Sbjct: 373 KGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDV 432
Query: 185 ITKVLELLCSVGRVMDAVEILEE--SG-----EQGRLGKVKGGCR----------FLKEM 227
+ V+ L + A++I+ + SG + V G C+ + K
Sbjct: 433 CSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLA 492
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG N T N L+ CE G ++ +V M G+ + ++Y+TLI G C G+I
Sbjct: 493 AVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGKI 552
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++ K+ + M ++ + YN ++ GL + D+ L + ++ P +
Sbjct: 553 EEAFKLKEEM--VQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYA 610
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
L + G+C +EDA + F + E + V+Y+ LI AYC+ V EA +L M
Sbjct: 611 LLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSR 670
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G LP +T+++++ G+C G V A ++ EE MR G LP Y+ LI C+ G
Sbjct: 671 GILPTCATYSSLIHGMCCIGRVDEAKEIFEE-MR--NEGLLPNVFCYTALIGGHCKLGQM 727
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
+L++M GI P+ +T+ ++
Sbjct: 728 DIVGSILLEMSSNGIRPNKITYTIMI 753
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 217/531 (40%), Gaps = 98/531 (18%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
+ S+ + P LK N +L LVK + +L +++ + GV D +T+ + C
Sbjct: 211 MFSKRGVFPCLKTCNLLLSSLVKAN-ELHKSYEVFDLACQGVAPDVFTFTTAINAFCKGG 269
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
RVGD L M+ GV PN V YN +I L K+G+ A M P+ VT+
Sbjct: 270 RVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYG 329
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+LI K E A +L + +S GF P+ V +++ C G + +A+ + +
Sbjct: 330 VLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRD----- 384
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN- 270
EM KG PN T+N L+ +C + ++ A V + G+S N
Sbjct: 385 --------------EMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNM 430
Query: 271 ---------------FVTYDTLIRGLCSGG-RIDDGLKI-----------------LQLM 297
FV+ ++ L SG R+ D L L
Sbjct: 431 DVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFK 490
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDG 355
+ +G N++L+GL +E E LKQM EK L + + I G C G
Sbjct: 491 LAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWG 550
Query: 356 NVEDAKRCFDQMIEE-----------------------------------GGVPNVVIYD 380
+E+A + ++M+++ G VPNV Y
Sbjct: 551 KIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYA 610
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ YC+ +R+ +A + K + + +N +++ CR GNV A KL + M+
Sbjct: 611 LLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKL-RDAMK- 668
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
RG LP YS LI +C G A + +M +G+LP+ + +L+
Sbjct: 669 -SRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALI 718
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 218/512 (42%), Gaps = 63/512 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + VI GL ++ + ++ D + R + PS+ + ++ L+K ++
Sbjct: 288 PNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEV 347
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M + G ++ + L+ G C +G+ ++ M +G+KPN V +NTL+ C+
Sbjct: 348 LVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCR 407
Query: 129 NGKVGRARS---------------------------------------LMSDMEEPNDVT 149
+ ++ +A L+S +D
Sbjct: 408 SNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSL 467
Query: 150 FSILICAYCKEENLVNALVLLEKSFSF-GFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+ L+ CK E A+ L K + G + VT +L LC G + + E+L++
Sbjct: 468 LTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQM 527
Query: 209 GEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E+G L GK++ + +EM ++ P+ TYN L+ + G +
Sbjct: 528 LEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKI 587
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D + ++ K G N TY L+ G C RI+D +K + ++ K + YN
Sbjct: 588 DDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVV--YN 645
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ R EA + M+ + P S I G C G V++AK F++M E
Sbjct: 646 ILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNE 705
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G +PNV Y LI +C+ ++ ++ EM+ +G P T+ ++ G C+ GN+ A
Sbjct: 706 GLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEA 765
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+L+ E +R G P + Y+ L K C++
Sbjct: 766 RELLNEMIRN---GIAPDTVTYNALQKGYCKE 794
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 200/472 (42%), Gaps = 63/472 (13%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-- 60
+S+ P+E +F +I G R + + ++ D ++ M P+ FN++L + +
Sbjct: 352 YSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQM 411
Query: 61 ------------------IDLARAFYRK---------------KMMASGVQGDDYTYAIL 87
+D+ + K+++ ++ D L
Sbjct: 412 EQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPL 471
Query: 88 MKGLCLTNRVGDGFKLLHVMKS-RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP- 145
+ GLC + +L + + +G+ N+V N L+H LC+ G + ++ M E
Sbjct: 472 VVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKG 531
Query: 146 ---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+ ++++ LI CK + A L E+ F PD T +++ L +G++ D
Sbjct: 532 LLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVH 591
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+L E+ E G +PNV TY +L+ YC+ ++ A+ F ++
Sbjct: 592 RLLHEAKEYG-------------------FVPNVYTYALLLEGYCKADRIEDAVKFFKNL 632
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + + V Y+ LI C G + + K+ M+ G + Y+S+++G+
Sbjct: 633 DYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKS--RGILPTCATYSSLIHGMCCIG 690
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DEA E ++M E L P + I G C G ++ +M G PN + Y
Sbjct: 691 RVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYT 750
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
+I YC+ ++EA EL+ EM +G P T+N + G C++ + L+
Sbjct: 751 IMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ 802
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 212/471 (45%), Gaps = 41/471 (8%)
Query: 27 INDVVKATDLVSRFNMTPSLKI--------FNSILDVLVKED-IDLARAFYRKKMMASGV 77
+ D + DL + N S ++ +N++L+ L + +D + Y + M+ V
Sbjct: 156 VADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYME-MLEDKV 214
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ YTY ++ G C V + + + ++ G+ P+ Y +LI C+ + A
Sbjct: 215 CPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 138 LMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
+ +M N+V ++ LI C E + A+ L K P V T T +++ LC
Sbjct: 275 VFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALC 334
Query: 194 SVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
R +A+ ++ KEME KG PN+ TY +LI S C L+
Sbjct: 335 GSERKSEALNLV-------------------KEMEEKGIKPNIHTYTVLIDSLCSQCKLE 375
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A ++ M G+ N +TY+ LI G C G I+D L +++LME R YN
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRT--YNE 433
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + N +A+ L +M K+ P V + I G C GN + A R M + G
Sbjct: 434 LIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG 492
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
VP+ Y +I + C+ +RV EA +L + +P + ++ G C+ G V A
Sbjct: 493 LVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
++E + + + LP S ++ LI LC G + A++L +MV + P
Sbjct: 553 LMLE---KMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 234/510 (45%), Gaps = 55/510 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARA 66
+E + +I GL R I++ A DL + + P+++ + ++ L +
Sbjct: 287 NEVAYTHLIHGLCVERRIDE---AMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEAL 343
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+M G++ + +TY +L+ LC ++ +LL M +G+ PN + YN LI+
Sbjct: 344 NLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G + A ++ ME PN T++ LI YCK N+ A+ +L K +PDV
Sbjct: 404 CKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDV 462
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ C R G R L M +G +P+ TY +
Sbjct: 463 VTYNSLIDGQC-------------------RSGNFDSAYRLLSLMNDRGLVPDPWTYTSM 503
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I S C++ ++ A D+F+ ++ + N V Y LI G C G++++ +L+ M SK
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML-SKN 562
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
++ +N++++GL + + EA ++M K L P ++ I DG+ + A
Sbjct: 563 CLPNSLT-FNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R F QM+ G P+ Y I YC+E R+++A +++ +M +G P T+++++ G
Sbjct: 622 YRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKG 681
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE------KGG---------- 464
G +A +++ R G P + LIK L E KGG
Sbjct: 682 YGDLGRTNSAFVVLK---RMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNM 738
Query: 465 --FQSASMLLVQMVGKGILPDYLTWNSLLI 492
F LL +MV G+ P+ ++ L++
Sbjct: 739 MEFDIVVELLEKMVEHGVTPNAKSYEKLML 768
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 215/459 (46%), Gaps = 46/459 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I G + MI D + +L+ N+ P+ + +N ++ K ++ A
Sbjct: 391 PNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVL 450
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+ V D TY L+ G C + ++LL +M RG+ P+ Y ++I SLCK
Sbjct: 451 NK-MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCK 509
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +V A L +E+ PN V ++ LI YCK + A ++LEK S +P+ +T
Sbjct: 510 SKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLT 569
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEM 227
++ LC+ G++ +A +LEE + L G R ++M
Sbjct: 570 FNALIHGLCTDGKLKEAT-LLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P+ TY I +YC G L A D+ MK +G+S + TY +LI+G GR
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVL-------YGLYRENQQ-----------DEALE 329
+ +L+ M D+ G + + S++ YG + + D +E
Sbjct: 689 NSAFVVLKRMHDT--GCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVE 746
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAY 386
L++M + P A +LG C GN+ A++ FD M ++ G+ P+ ++++ L+
Sbjct: 747 LLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCC 806
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
C+ E+ EA++++ +M G+LP + ++ L ++G
Sbjct: 807 CKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKG 845
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 7/274 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++S G++D V+ +M D + N TY+ ++ G C G +++ + + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSLKILGFCVDGN 356
++ G Y S++ G + D A + K+M R V + I G CV+
Sbjct: 246 EA--GLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERR 303
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+++A F +M ++ P V Y LI A C ER EA L+KEM G P T+
Sbjct: 304 IDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTV 363
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ LC Q + A +L+ + + +G +P Y+ LI C++G + A ++ M
Sbjct: 364 LIDSLCSQCKLEKARELLGQMLE---KGLMPNVITYNALINGYCKRGMIEDALDVVELME 420
Query: 477 GKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
+ + P+ T+N L+ ++ + +LN+M+
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKML 454
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 137/330 (41%), Gaps = 41/330 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +I GL + + + + + ++ P++ ++ L+K D D A+
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLK-DGDFDHAYR 623
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R ++M++SG + D +TY ++ C R+ D ++ MK GV P+ Y++LI
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYG 683
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILI---------------CAYCKEENLVN--- 165
G+ A ++ M EP+ TF LI C N++
Sbjct: 684 DLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDI 743
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------- 212
+ LLEK G P+ + K++ +C +G + A ++ + ++
Sbjct: 744 VVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALL 803
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+L K + + +M G LP +++ ILI + G + VF ++ G
Sbjct: 804 SCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYY 863
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
+ + + +I G+ G ++ ++ +ME
Sbjct: 864 DDELAWKIIIDGVGKQGLVEAFYELFNVME 893
>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 212/478 (44%), Gaps = 72/478 (15%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKED-IDLAR 65
E FI + + G+A + KA DL R F+ ++K FN++L+V+++E DLA
Sbjct: 100 EKSFIIMFKAYGKAHLPQ---KALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLAL 156
Query: 66 AFYR--------------------------------------KKMMASGVQGDDYTYAIL 87
FY + M D YTY+ L
Sbjct: 157 EFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTL 216
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---- 143
M GLC R+ + LL M+ G PN V +N LI +LCK G + RA L+ +M
Sbjct: 217 MHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGC 276
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
PN+VT++ L+ C + L A+ LL + + VP+ +T +++ GR +D V
Sbjct: 277 VPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVR 336
Query: 204 I---LEESGEQG-------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ LEE G +G + GK + G + KEM KGC PN Y+ LI C
Sbjct: 337 VLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLC 396
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G D A + +MK G + N TY +L+ G G I + + + M D+ + +
Sbjct: 397 REGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDN-DCNHHE 455
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ Y+ ++ GL + + EAL KQM + V S I GFC VE + F+
Sbjct: 456 VC-YSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFN 514
Query: 366 QMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
QM+ P+VV Y+ L++A+C + V A +++ M G P T + L L
Sbjct: 515 QMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 200/417 (47%), Gaps = 51/417 (12%)
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----- 143
K L L +R+G F +KS +NT+++ + + G A + +
Sbjct: 118 KALDLFHRMGAEFHCKQTVKS---------FNTVLNVVIQEGCFDLALEFYNHVIDSNSF 168
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+PN ++F+++I A C+ N+ A+ + V D T + ++ LC+ GR+ +
Sbjct: 169 SNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDE 228
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
AV +L+E M+ +G PN +N+LIS+ C+ G L A + +
Sbjct: 229 AVSLLDE-------------------MQVEGTFPNPVAFNVLISALCKKGDLSRASKLVD 269
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+M + G N VTY++L+ GLC G++D + +L M +K I+ + +++ G +
Sbjct: 270 NMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK-CVPNDIT-FGTLVDGFVK 327
Query: 321 ENQQDEALEYLKQMEKLFPRAVDRSLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ + + L +E+ R + S I G +G E + + +M+E+G PN ++
Sbjct: 328 HGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIV 387
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y LI C+E + EA E + EM G+ P + T+++++ G G++ A+ LV ++M
Sbjct: 388 YSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAI-LVWKEM 446
Query: 439 RGIGRGSLPGSGH----YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
H YS LI LC+ G + A ++ QM+ +GI D + ++S++
Sbjct: 447 TD------NDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMI 497
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 138/298 (46%), Gaps = 28/298 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLAR 65
P+E + +++ GL ++ KA L++R P+ F +++D VK L
Sbjct: 278 PNEVTYNSLVHGLCLKGKLD---KAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDG 334
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ G +G++++Y+ L+ GL + G +L M +G KPN+++Y+ LI
Sbjct: 335 VRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDG 394
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC+ GK A+ + +M+ PN T+S L+ Y + ++ A+++ ++
Sbjct: 395 LCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHH 454
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
V + ++ LC G++ +A+ + ++ +G V+ G +
Sbjct: 455 EVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFN 514
Query: 226 EM--ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+M P+V TYNIL++++C + A+D+ N M G +F+T D ++ L
Sbjct: 515 QMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 207/409 (50%), Gaps = 29/409 (7%)
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEE---- 161
V+++RG ++++++ L+++ +G A + + N + C Y +
Sbjct: 145 VLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHN-LQIPFHSCGYLFDRLMKL 203
Query: 162 NLVN-ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------- 212
NL + A E+ G+ PDV ++ LC ++ +A + E G++G
Sbjct: 204 NLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSF 263
Query: 213 --------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ G + G R + M P+V TY++LI+ C+ G LD A +F +M
Sbjct: 264 NTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCD 323
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ N VT+ TLI G C GR D G++I Q M ++G K + YN+++ GL +
Sbjct: 324 RGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM--LRKGVKPDVITYNTLINGLCKVGDL 381
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
EA + + +M + L P ++ I G C +G++E A +M++EG + V + L
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I +C+E +V EA ++EM G P +T+ V+ G C++G+V T KL++E
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ---C 498
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G +PG Y+ L+ LC++G ++A+MLL M+ G++PD +T+N LL
Sbjct: 499 DGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 200/413 (48%), Gaps = 29/413 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKK 71
+F ++ + +D ++ LV + N+ + D L+K ++ A AFY ++
Sbjct: 157 VFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFY-EE 215
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ G D + +LM LC +++ + L + RG++P V +NTLI+ CK+G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 132 VGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ + R +M + P+ T+S+LI CKE L +A L + G VP+ VT T
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C GR +EI + +M RKG P+V TYN LI+ C
Sbjct: 336 LINGHCVTGRADLGMEIYQ-------------------QMLRKGVKPDVITYNTLINGLC 376
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G L A + +M G+ + TY LI G C G ++ L+I + M KEG +
Sbjct: 377 KVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM--VKEGIELD 434
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ +++ G RE Q EA L++M + + P ++ I GFC G+V+ +
Sbjct: 435 NVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLK 494
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+M +G VP VV Y+ L++ C++ +++ A+ L+ M G +P T+N +L
Sbjct: 495 EMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 149/311 (47%), Gaps = 22/311 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD F ++ L + IN+ + + + P++ FN++++ K +L + F
Sbjct: 222 PPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSG-NLDQGF 280
Query: 68 YRKK-MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+ MM + V D +TY++L+ GLC ++ D KL M RG+ PN V + TLI+
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C G+ + M +P+ +T++ LI CK +L A L+ + G PD
Sbjct: 341 CVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
T T +++ C G + A+EI +E ++G R G+V R L+E
Sbjct: 401 FTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLRE 460
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G P+ TY ++I +C+ G + + + +M+ DG VTY+ L+ GLC G+
Sbjct: 461 MLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQ 520
Query: 287 IDDGLKILQLM 297
+ + +L M
Sbjct: 521 MKNANMLLDAM 531
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 109/237 (45%), Gaps = 22/237 (9%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL--YGLYRENQQDEALE- 329
+Y T+ LC+ + + +LQ + S++G S + SVL G ++ N L
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVV-SRKGKNSASSVFTSVLEARGTHQSNLVFSVLMN 163
Query: 330 ------YLKQMEKLFPRAVDRSLKI----LGFCVD-----GNVEDAKRCFDQMIEEGGVP 374
Y + F +L+I G+ D A ++++++ G P
Sbjct: 164 AYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPP 223
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+V ++ L+H C+E ++ EA L E+ G P +FNT+++G C+ GN+ +L
Sbjct: 224 DVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLK 283
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
M P YS LI LC++G A+ L ++M +G++P+ +T+ +L+
Sbjct: 284 RFMMEN---RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 189/417 (45%), Gaps = 55/417 (13%)
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKSF 174
+ +N ++ LC GK RA L+ M PN VT++ +I +C + AL V+ E
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRE 175
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G PD T ++ C +GR+ DAV++ +E +G + P
Sbjct: 176 RGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVA------------------P 217
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+ YN LI YC+ G LD AL DM GI+ TY+ L+ L R D +L
Sbjct: 218 SAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVL 277
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFC 352
+ M+ K G + YN ++ G +E + +ALE ++M + RA V + I F
Sbjct: 278 EEMQ--KNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFS 335
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G V++ R F+ +++G P+VV+Y+ LI+++C + A E+M EM P
Sbjct: 336 RKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDM 395
Query: 413 TFNTVLSGLCRQGNVGTALKLVEE--------------------DMRG------------ 440
T+NT++ G C G + A L++E M+G
Sbjct: 396 TYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEM 455
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ +G P Y+ LI+ LC+ A L+ +MV KGI PD T+ SL+ L+ +
Sbjct: 456 MDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 199/403 (49%), Gaps = 37/403 (9%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
T+ I+++ LC T + +LL M +PN+V YNT+I C G+V A +M +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 143 EE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVG 196
E P+ T++ LI +CK + +A+ + ++ + G V P V ++ C VG
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233
Query: 197 RVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYN 240
++ A++ E+ ++G + L+EM++ G P+V TYN
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
ILI+ YC+ G AL+VF +M G+ VTY +LI G++ + ++ +
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVA--V 351
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
K+G + + YN+++ + A E + +MEK + P + + + GFC+ G ++
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A+ D+M + G P++V Y+ LI Y + +++A + EM G+ P T+N ++
Sbjct: 412 EARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALI 471
Query: 419 SGLC--RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
GLC RQG+ A L++E + +G P Y LI+ L
Sbjct: 472 QGLCKIRQGD--DAENLMKE---MVAKGITPDDSTYISLIEGL 509
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 175/370 (47%), Gaps = 56/370 (15%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGR 134
G+ D YTYA L+ G C R+ D K+ M ++G V P++V+YN LI C GK+
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237
Query: 135 ARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A DM + T+++L+ A + +A +LE+ GF PDV T ++
Sbjct: 238 ALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN 297
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
C G A+E+ EE ++G R G+V+ R +KG P
Sbjct: 298 GYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRP 357
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V YN LI+S+C G ++ A ++ +M+ I + +TY+TL+RG C GR+D+ ++
Sbjct: 358 DVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD 354
M +K G + + YN++ I G+ +
Sbjct: 418 DEM--TKRGIQPDLVSYNTL---------------------------------ISGYSMK 442
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G+++DA R D+M+++G P ++ Y+ LI C+ + +A LMKEM G P ST+
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502
Query: 415 NTVLSGLCRQ 424
+++ GL +
Sbjct: 503 ISLIEGLTTE 512
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 158/335 (47%), Gaps = 34/335 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSIL----DVLVKEDIDL 63
PD+ + T+I G + + D VK D ++++ + PS ++N+++ DV K D+ L
Sbjct: 181 PDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV-GKLDVAL 239
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
YR+ M+ G+ TY +LM L + R D + +L M+ G P+ YN LI
Sbjct: 240 Q---YREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILI 296
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ CK G +A + +M + VT++ LI + ++ + L + G
Sbjct: 297 NGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIR 356
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PDVV ++ C+ G + A EI + EME+K P+ TY
Sbjct: 357 PDVVMYNALINSHCTGGDMERAYEI-------------------MAEMEKKRIPPDDMTY 397
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N L+ +C G LD A + ++M GI + V+Y+TLI G G I D L++ M D
Sbjct: 398 NTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMD 457
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+G + YN+++ GL + Q D+A +K+M
Sbjct: 458 --KGFNPTLMTYNALIQGLCKIRQGDDAENLMKEM 490
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 122/260 (46%), Gaps = 23/260 (8%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL 87
+D + + + +P + +N +++ KE + ++M GV+ TY L
Sbjct: 271 SDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSL 330
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--- 144
+ +V + +L +V +G++P+ V+YN LI+S C G + RA +M++ME+
Sbjct: 331 IYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRI 390
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+D+T++ L+ +C L A L+++ G PD+V+ ++
Sbjct: 391 PPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLI-------------- 436
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
SG + G +K R EM KG P + TYN LI C+ D A ++ +M
Sbjct: 437 ----SGYSMK-GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMV 491
Query: 264 IDGISWNFVTYDTLIRGLCS 283
GI+ + TY +LI GL +
Sbjct: 492 AKGITPDDSTYISLIEGLTT 511
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDI-DLAR 65
PPD+ + T++RG +++ D +++ + P L +N+++ +K DI D R
Sbjct: 391 PPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALR 450
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
R +MM G TY L++GLC + D L+ M ++G+ P+ Y +LI
Sbjct: 451 V--RDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEG 508
Query: 126 L 126
L
Sbjct: 509 L 509
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 222/477 (46%), Gaps = 31/477 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
++R +N+ V + +TPS N +L++ V+ I+ A + +M
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVF-DEMSVR 211
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV D +Y +++ G ++ + + L M RG P++ ++ +LC+NG V RA
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 136 ----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R ++ +PN + F+ LI CK+ ++ A +LE+ G+ P+V T T +++
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC G A + FLK + PNV TY +I YC+
Sbjct: 332 LCKRGWTEKAFRL------------------FLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
L+ A +F+ MK G+ N TY TLI G C G +++ LM D EG I Y
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD--EGFMPNIYTY 431
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N+ + L ++++ EA E L + L V ++ I C ++ A F +M +
Sbjct: 432 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 491
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G ++ + + LI A+C++++++E+ L + + G +P T+ +++S C++G++
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
ALK R G +P S Y LI LC+K A L M+ +G+ P +T
Sbjct: 552 ALKYFHNMKR---HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 215/512 (41%), Gaps = 38/512 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD S + ++ G R I + + T ++ R P IL L + + +
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIW 273
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +KM+ G + + + L+ GLC + F++L M G KPN + LI LC
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 128 KNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A L SD +PN T++ +I YCKE+ L A +L + G P+V
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T ++ C G A E++ G++G + PN+ TYN
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEGFM-------------------PNIYTYNAA 434
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I S C+ A ++ N G+ + VTY LI+ C I+ L M +K
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM--NKT 492
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNVED 359
G + + N ++ R+ + E+ E L Q+ L P + I +C +G+++
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKES-ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + F M G VP+ Y LI C++ V EA +L + M G P T T+
Sbjct: 552 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 611
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C++ + A+ L+E + + ++ L++ LC + A++ +++ K
Sbjct: 612 EYCKRNDSANAMILLEPLDKKLWIRTV------RTLVRKLCSEKKVGVAALFFQKLLEKD 665
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
D +T + S+ L+ L E +S
Sbjct: 666 SSADRVTLAAFTTACSESGKNNLVTDLTERIS 697
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 46/326 (14%)
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L E GRL + G + +M+ +G P+ T N ++ E G+++ A +VF++M
Sbjct: 153 MLRNFSEIGRLNEAVG---MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMS 209
Query: 264 IDGISWNFVTYDTLIRG-----------------------------------LCSGGRID 288
+ G+ + +Y ++ G LC G ++
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ + M D G K + + S++ GL ++ +A E L++M + P +
Sbjct: 270 RAIWYFRKMIDL--GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C G E A R F +++ PNV Y +I YC+E+++ A L M
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P +T+ T+++G C+ G+ G A +L+ ++ G G +P Y+ I +LC+K
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELM--NLMG-DEGFMPNIYTYNAAIDSLCKKSRA 444
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A LL + G+ D +T+ L+
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILI 470
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 365 DQMIEEGGVPNV-VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
D ++ G + + C++ + + R+ EA ++ +M G P + T N VL
Sbjct: 135 DSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVE 194
Query: 424 QGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G + A + +E +RG+ +P S Y ++ G Q A L M+ +G +P
Sbjct: 195 LGLIEYAENVFDEMSVRGV----VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIP 250
Query: 483 DYLTWNSLLICLSQQ 497
D T +L L +
Sbjct: 251 DNATCTLILTALCEN 265
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 227/506 (44%), Gaps = 65/506 (12%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI-LMKGLCLTNRVGDGFK 102
P F S++ VKE ++A A K M + + + A LMKG C+ +
Sbjct: 108 PPEGTFTSVITACVKEG-NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 166
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
L++ + G+ PN V Y+ LI CKNG + +A S+M+ + + + ++ Y
Sbjct: 167 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 226
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K ++ NA + + G + +V T +L LC G++ +A + +E +G
Sbjct: 227 KCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVV 285
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R + C+ KEM G PN T+ IL+ Y + G +++A +F+ M
Sbjct: 286 SYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRM 345
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLY 319
K I T +I+GLC GR +G + +K S+G + PYN+++ G
Sbjct: 346 KDANILPTDTTLGIIIKGLCKAGRSFEGRDLF-----NKFVSQGFVPTCMPYNTIIDGFI 400
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+E + A ++M + + P V + I GFC N++ A + + M +G ++
Sbjct: 401 KEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIK 460
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL----KL 433
Y LI +C+ ++ A EL+ E+ G G P +N++++G NV A+ K+
Sbjct: 461 AYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKM 520
Query: 434 VEE----DMRG------------------------IGRGSLPGSGHYSPLIKALCEKGGF 465
V E D++ + +G LP ++ LI LC KG F
Sbjct: 521 VNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQF 580
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
++A +L M GK ++P L +N+L+
Sbjct: 581 ENARKILEDMNGKNMIPSVLIYNTLI 606
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 226/506 (44%), Gaps = 61/506 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
MTPS++ N +L +V++++ KM+ GV GD +T ++++ + +
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+ K+RGV+ + Y+ +H LC G A SL+ +M P + TF+ +I A
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
KE N+ AL L + + G ++ T +++ C G + A+ ++ E E G
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 213 -----------RLGKVKGGCRFLKEMERKGC----------------------------- 232
+ G ++ F EM+ KG
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240
Query: 233 -----LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
L NV T+N L+S C+ G ++ A ++++++ GIS N V+Y+ +I G C I
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+ K+ + M D+ G + ++ G +++ + A +M+ D +L
Sbjct: 301 NAACKVYKEMLDN--GFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLG 358
Query: 348 IL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I+ G C G + + F++ + +G VP + Y+ +I + +E + AS + +EM
Sbjct: 359 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV 418
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+ +++ G C+ N+ ALKL+ + R +G Y LI C++
Sbjct: 419 GITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR---KGLKMDIKAYGTLIDGFCKRRDM 475
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
+SA LL ++ G G+ P+ +NS++
Sbjct: 476 KSAHELLNELRGAGLSPNRFIYNSMI 501
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 228/478 (47%), Gaps = 30/478 (6%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
+S + P+ ++ ++D K +I+ A FY +M G++ Y+ +++G
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFY-SEMKTKGIRSSVYSLNSILEGYLKCQ 229
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFS 151
+ F + + G+ N +NTL+ LCK GK+ A +L ++ PN V+++
Sbjct: 230 SWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYN 288
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+I +C+++N+ A + ++ GF P+ VT T +++ G + +A I +
Sbjct: 289 NIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDA 348
Query: 212 GRLGK-------VKGGCRFLKEME---------RKGCLPNVDTYNILISSYCETGVLDSA 255
L +KG C+ + E +G +P YN +I + + G ++ A
Sbjct: 349 NILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 408
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+V+ +M GI+ + VTY +LI G C G ID LK+L M+ ++G K I Y +++
Sbjct: 409 SNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK--RKGLKMDIKAYGTLI 466
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G + A E L ++ L P + I GF NVE+A + +M+ EG
Sbjct: 467 DGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIP 526
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
++ Y LI + R+ AS++ EM G LP +++GLC +G A K+
Sbjct: 527 CDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKI 586
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ EDM G+ +P Y+ LI ++G Q A L +M+ +G++PD +T++ L+
Sbjct: 587 L-EDMN--GKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 192/414 (46%), Gaps = 29/414 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSI-LDVLVKEDIDLARAFYRKKM 72
F T++ L + +N+ D V ++P++ +N+I L K++I+ A Y K+M
Sbjct: 252 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY-KEM 310
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ +G + T+ ILM G + + F + H MK + P +I LCK G+
Sbjct: 311 LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRS 370
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
R L + P + ++ +I + KE N+ A + + G P VT T +
Sbjct: 371 FEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSL 430
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ C + A+ + L +M+RKG ++ Y LI +C+
Sbjct: 431 IDGFCKGNNIDLAL-------------------KLLNDMKRKGLKMDIKAYGTLIDGFCK 471
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ SA ++ N+++ G+S N Y+++I G + +++ + + + M + EG +
Sbjct: 472 RRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN--EGIPCDL 529
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y S++ GL + + A + +M + + P ++ I G C G E+A++ +
Sbjct: 530 KTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILED 589
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M + +P+V+IY+ LI + +E ++EA L EM G +P T++ +++G
Sbjct: 590 MNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 28/300 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLA 64
P ++ +I+GL +A + DL ++F P+ +N+I+D +KE +I+LA
Sbjct: 352 PTDTTLGIIIKGLCKA---GRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 408
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
YR+ M G+ TY L+ G C N + KLL+ MK +G+K + Y TLI
Sbjct: 409 SNVYRE-MCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLID 467
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK + A L++++ PN ++ +I + N+ A+ L +K + G
Sbjct: 468 GFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPC 527
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFL 224
D+ T T +++ L GR++ A +I E +G L G+ + + L
Sbjct: 528 DLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL 587
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
++M K +P+V YN LI+ + + G L A + ++M G+ + +TYD L+ G G
Sbjct: 588 EDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKG 647
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 113/261 (43%), Gaps = 16/261 (6%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T ++++ + + G + A F K G+ + Y + LC L +L+ M
Sbjct: 42 TLHVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREM 101
Query: 298 EDSKEGSKGRISP---YNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGF 351
+ G I P + SV+ +E EAL M K AV SL + G+
Sbjct: 102 R-----AAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSL-MKGY 155
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C+ GN+ A +++ E G VPN V Y LI C+ + +A E EM G
Sbjct: 156 CMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSV 215
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+ N++L G + + A + + + L ++ L+ LC++G A L
Sbjct: 216 YSLNSILEGYLKCQSWQNAFTMFNDALES----GLANVFTFNTLLSWLCKEGKMNEACNL 271
Query: 472 LVQMVGKGILPDYLTWNSLLI 492
+++ KGI P+ +++N++++
Sbjct: 272 WDEVIAKGISPNVVSYNNIIL 292
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 127/520 (24%), Positives = 228/520 (43%), Gaps = 36/520 (6%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNM-------TPSLKIFNSILDVLVKE 59
+P +F + IR + D + +L+S FN TP FN IL LVK
Sbjct: 17 NPNFIGLFPSSIRLFSQLHHKQD--EENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKA 74
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++M +G++ D +T+ IL+ F + + +G P ++ +
Sbjct: 75 KHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITF 134
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFS 175
NTLI LC G + +A + + V++ LI CK + AL LL++
Sbjct: 135 NTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDG 194
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKG 219
P+ V +++ +C V DA ++ + + + K+
Sbjct: 195 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY 254
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+M+++ PNV T+NIL+ +C+ G ++ A V M D I + VTY++L+
Sbjct: 255 AIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMD 314
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KL 337
G CS +++ I M + G + Y +++ G + DEA+ ++M K+
Sbjct: 315 GYCSINKVNKAKDIFDSM--ASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKI 372
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V S I G C G + A + D+M + G PN+V Y ++ A C+ V +A
Sbjct: 373 IPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIA 432
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L+ + G P T+ ++ GLC+ G + A + E+ + +G Y+ +I+
Sbjct: 433 LLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLV---KGYNLDVYAYTVMIQ 489
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C+KG F A LL +M G +P+ T+ +++ L ++
Sbjct: 490 GFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEK 529
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 199/435 (45%), Gaps = 64/435 (14%)
Query: 44 PSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P+ FN+++ L +K I A F+ K++A G D +Y L+ GLC R+ +
Sbjct: 129 PTAITFNTLIKGLCLKGHIHQALHFH-DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQ 187
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME------------------- 143
LL + + V+PN+V+YN +I ++CK V A L S M
Sbjct: 188 LLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFS 247
Query: 144 --------------------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
PN TF+IL+ +CKE + +A V+L PDVV
Sbjct: 248 AVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVV 307
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ CS+ +V A +I + M G + NV Y ++
Sbjct: 308 TYNSLMDGYCSINKVNKAKDIFD-------------------SMASGGVIANVQIYTTMV 348
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ ++D A+++F +M+ I N VTY +LI GLC GRI LK++ M D G
Sbjct: 349 NGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD--RG 406
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I Y+S+L L + + D+A+ L ++ + P ++ I G C G +EDA+
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F+ ++ +G +V Y +I +C + +A L+ +M +G +P A T+ V+ L
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526
Query: 422 CRQGNVGTALKLVEE 436
+ TA KL+ E
Sbjct: 527 FEKDENDTAEKLLRE 541
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 28/313 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE----DIDLA 64
PD + +I G +N + + + + N+ P++ FN ++D KE D +
Sbjct: 234 PDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVV 293
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A MM ++ D TY LM G C N+V + M S GV N IY T+++
Sbjct: 294 LAI----MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK V A +L +M PN VT+S LI CK + AL L+++ G P
Sbjct: 350 GFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
++VT + +L+ LC V A+ +L +QG + G+++
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVF 469
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+++ KG +V Y ++I +C+ G D AL + + M+ +G N TY+ +I L
Sbjct: 470 EDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEK 529
Query: 285 GRIDDGLKILQLM 297
D K+L+ M
Sbjct: 530 DENDTAEKLLREM 542
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 189/394 (47%), Gaps = 28/394 (7%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G Q + +Y L+ G+C KLL + R KPN V+Y+T+I +LC
Sbjct: 151 FHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC 210
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V A L S+M + VT+S LI +C E L A+ LL + P+V
Sbjct: 211 KYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVY 270
Query: 184 TITKVLELLCSVGRVMDAVEILE--------------ESGEQGR--LGKVKGGCRFLKEM 227
T +++ LC G+V +A +L + G + +VK M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P+V TY ILI+ +C+ ++D AL++F +M + VTY +LI GLC GRI
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
++ M D G + Y+S++ GL + D A+ +M + + P +
Sbjct: 391 PYVWDLIDEMHD--RGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFT 448
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ + G C G ++DA+ F ++ +G NV Y+ +I +C++ + EA ++ +M +
Sbjct: 449 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDN 508
Query: 406 GYLPIASTFNTVLSGLCRQ----GNVGTALKLVE 435
G +P A TF ++ L ++ GNVG K+ E
Sbjct: 509 GCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWE 542
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 213/491 (43%), Gaps = 33/491 (6%)
Query: 35 DLVSRFN------MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D VS+FN TP + FN ILD K ++ G+Q D T IL+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEE 144
C ++ GF +L + RG P++V NTLI LC G+V +A L++ +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
N V++ LI CK + A+ LL+K P+VV + +++ LC V +A +
Sbjct: 162 LNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGL 221
Query: 205 LEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
E +G GK+K L EM K PNV TYNIL+ + C+
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G + A V M + + +TY TL+ G + + M S G +
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM--SLMGVTPDV 339
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y ++ G + DEAL K+M + + P V S I G C G + D+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M + G NV+ Y LI C+ + A L +M G P TF +L GLC+ G
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ A ++ ++ + +G Y+ +I C++G + A +L +M G +PD +T
Sbjct: 460 LKDAQEVFQDLLT---KGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVT 516
Query: 487 WNSLLICLSQQ 497
+ ++I L ++
Sbjct: 517 FEIIIIALFKK 527
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 196/410 (47%), Gaps = 48/410 (11%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
T+I G+ + I D A L+ + + P++ ++++I+D L K + +M
Sbjct: 169 TLINGVCK---IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEM 225
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D TY+ L+ G C+ ++ + LL+ M + + PN YN L+ +LCK GKV
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKV 285
Query: 133 GRARSLMSDM----EEPNDVTFSILICAYC------KEENLVNALVLLEKSFSFGFVPDV 182
A+S+++ M +P+ +T+S L+ Y K +++ NA+ L+ G PDV
Sbjct: 286 KEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM------GVTPDV 339
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
T T ++ C V +A+ + +E ++ + G++ + E
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE 399
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G NV TY+ LI C+ G LD A+ +FN MK GI N T+ L+ GLC GGR
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+ D ++ Q + +G + YN ++ G ++ +EAL L +ME P AV
Sbjct: 460 LKDAQEVFQDL--LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTF 517
Query: 345 SLKILG-FCVD---GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+ I+ F D GNV K+ ++ + + G + + C H++ EE
Sbjct: 518 EIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSITFKC--HSHDGEE 565
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 27/270 (10%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ G+Q D +T IL+ C ++ F +L + RG P+++ + TLI+ LC G
Sbjct: 951 RLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKG 1010
Query: 131 KVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V +A L++ + N V++ LI CK + A+ LL K PDVV
Sbjct: 1011 QVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYN 1070
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC V A G F EM KG +V TYN LI +
Sbjct: 1071 TIIDALCKHQLVSKAY-----------------GLFF--EMNVKGISADVVTYNTLIYGF 1111
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR--IDDGLKILQLMEDSKEGS 304
C G L A+ + N M + I+ N TY+ L+ LC G+ +D+ L +L MED+ G
Sbjct: 1112 CIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDN--GC 1169
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM 334
K + ++ L+ +++ D+ + L +M
Sbjct: 1170 KANAVTFEIIISALFEKDENDKVEKLLHEM 1199
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 137/312 (43%), Gaps = 60/312 (19%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
L H ++ +G++P+ N LI+ C G++ S+++ + P+ +TF+ LI C
Sbjct: 948 LSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLC 1007
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ + AL +K + GF + V+ ++ +C +G A+++L + GRL K
Sbjct: 1008 LKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI--DGRLTK-- 1063
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
P+V YN +I + C+ ++ A +F +M + GIS + VTY+TLI
Sbjct: 1064 ---------------PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLI 1108
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ--DEALEYLKQMEK 336
G C G++ + + +L M + + YN ++ L +E + DE+L L +ME
Sbjct: 1109 YGFCIVGKLKEAIGLLNKM--VLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKME- 1165
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ G N V ++ +I A +++ +
Sbjct: 1166 --------------------------------DNGCKANAVTFEIIISALFEKDENDKVE 1193
Query: 397 ELMKEMTGHGYL 408
+L+ EM G L
Sbjct: 1194 KLLHEMIARGLL 1205
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 23/229 (10%)
Query: 44 PSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P F ++++ L +K ++ A F+ K++A G Q + +Y L+ G+C K
Sbjct: 994 PDTITFTTLINGLCLKGQVNKALHFH-DKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIK 1052
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
LL + R KP+ V+YNT+I +LCK+ V +A L +M + VT++ LI +C
Sbjct: 1053 LLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFC 1112
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
L A+ LL K P+V T +++ LC G+ ++L+ES
Sbjct: 1113 IVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGK-----DLLDES---------- 1157
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
L +ME GC N T+ I+IS+ E D + ++M G+
Sbjct: 1158 --LSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGL 1204
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + I G C+ G V A D+++ +G N V Y LI+ C+ R A +L
Sbjct: 994 PDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 1053
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL-VEEDMRGIGRGSLPGSGHYSPLIK 457
++++ G P +NT++ LC+ V A L E +++GI + Y+ LI
Sbjct: 1054 LRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVT----YNTLIY 1109
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL---LLLLNEM----- 509
C G + A LL +MV K I P+ T+N L+ L ++ LL L +L++M
Sbjct: 1110 GFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGC 1169
Query: 510 ----VSFVMVVHELSAKEKRCKLRSLNH 533
V+F +++ L K++ K+ L H
Sbjct: 1170 KANAVTFEIIISALFEKDENDKVEKLLH 1197
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 327 ALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+L + +++ + P ++ I FC G + ++++ G P+ + + LI+
Sbjct: 947 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGL 1006
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI-GRGS 445
C + +V +A ++ G+ ++ T+++G+C+ G+ A+KL +R I GR +
Sbjct: 1007 CLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL----LRKIDGRLT 1062
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I ALC+ A L +M KGI D +T+N+L+
Sbjct: 1063 KPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLI 1108
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 33/438 (7%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDL +R+ M+ SGV+ Y+ I+++GLC V KL+ +G+KP + YN
Sbjct: 205 IDLCLEIFRR-MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 121 TLIHSLCK----NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T+I++ K +G G + + D N VT+++L+ K + +A L ++
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G DV T ++ C R G +K E+ KG P+
Sbjct: 324 GIESDVHVYTSLISWNC-------------------RKGNMKRAFLLFDELTEKGLSPSS 364
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI C+ G + +A + N+M+ G++ V ++TLI G C G +D+ I +
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
ME ++G + + N++ R + DEA ++L +M + + V + I +C +
Sbjct: 425 ME--QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GNVE+AKR F +M +G PN + Y+ +I+AYC++ +++EA +L M +G P + T+
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 415 NTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+++ G C NV A++L E ++G+ + S+ Y+ +I L + G A L
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT----YTVMISGLSKAGKSDEAFGLYD 598
Query: 474 QMVGKGILPDYLTWNSLL 491
+M KG D + +L+
Sbjct: 599 EMKRKGYTIDNKVYTALI 616
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 7/287 (2%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R G+V+ + +KE KG P TYN +I++Y + V MK DG+ +N V
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY L+ G++ D K+ M + G + + Y S++ R+ A
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRE--RGIESDVHVYTSLISWNCRKGNMKRAFLLFD 353
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++ + L P + I G C G + A+ ++M +G V+++ LI YC++
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
V EAS + M G+ T NT+ S R A + + M G G +
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG---GVKLSTV 470
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI C++G + A L V+M KG+ P+ +T+N ++ +Q
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 25/241 (10%)
Query: 48 IFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
+FN+++D ++ +D A Y M G Q D +T + R + + L
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIY-DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEEN 162
M GVK ++V Y LI CK G V A+ L +M +PN +T++++I AYCK+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A L + G PD T T ++ C V +A+ R
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM-------------------R 560
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
EM KG N TY ++IS + G D A ++++MK G + + Y LI +
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Query: 283 S 283
S
Sbjct: 621 S 621
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKK 71
+F T+I G R M+++ D++ + + N+I + + D A+ + +
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR- 459
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
MM GV+ +Y L+ C V + +L M S+GV+PN++ YN +I++ CK GK
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ AR L ++ME +P+ T++ LI C +N+ A+ L + G + VT T
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 188 VLELLCSVGRVMDAVEILEESGEQG 212
++ L G+ +A + +E +G
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 50/310 (16%)
Query: 240 NILISSYCETGVLDSALDVFNDM-----------------------KID----------- 265
+++ Y + G+ + L VF+ M +ID
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 266 -GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ + ++ GLC G ++ K+++ E S +G K YN+++ ++
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIK--EFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
LK M+K + V +L + +G + DA++ FD+M E G +V +Y L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGI 441
I C++ ++ A L E+T G P + T+ ++ G+C+ G +G A L+ E +G+
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS------ 495
+ ++ LI C KG ASM+ M KG D T N++ C +
Sbjct: 396 NITQVV----FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 496 QQTTWLLLLL 505
+ WL ++
Sbjct: 452 EAKQWLFRMM 461
>gi|359495888|ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Vitis vinifera]
Length = 580
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 224/481 (46%), Gaps = 49/481 (10%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGD-----------DYTYAILM-KGLCLTN 95
+FN +LD ++K+ ++ R KMM V DYT + M + LCL
Sbjct: 93 VFN-VLDAILKDSLE------RLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEG 145
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
++ L + M +GV P+ + +N L++ LCK G + +A +L+ +M E PN TF+
Sbjct: 146 KLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFN 205
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE----- 206
I YC N+ AL L + G P+ VT ++ LC G + DA ++LE
Sbjct: 206 TFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDD 265
Query: 207 ESGEQG--------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+ G++ + G + EM ++G +V YN+LI +C +
Sbjct: 266 DCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDM 325
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+SA F +M G+ + TY+TLI G C G +D+ I +M SK G+ + Y
Sbjct: 326 NSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVM--SKMGAAPDLISYK 383
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ GL A ++L M + + P + ++ I G G++ +A DQM+
Sbjct: 384 MIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSF 443
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PNV Y+ LIHA + + +A + KEM +G P T+N ++ C G + A
Sbjct: 444 GIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFA 503
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L+L +E +R RG P Y+ LI+ C +G A LL ++ G+ D+ + L
Sbjct: 504 LRLYDEMLR---RGYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPFQIL 560
Query: 491 L 491
+
Sbjct: 561 I 561
>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
Length = 757
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 221/506 (43%), Gaps = 68/506 (13%)
Query: 48 IFNSILDVLV-KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
IF+ +L L + +D A ++M G D ++Y+IL+KG C R + +LL +
Sbjct: 130 IFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSM 189
Query: 107 MKSRG---VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
M G PN V Y T+I LCK V RA+ + M + PN+ T++ LI Y
Sbjct: 190 MADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLS 249
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+ +L++ + G PD +L+ LC GR +A I + +G
Sbjct: 250 IGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI 309
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
G + FL M G P+ +NI+ +Y + ++D A+ +F+ M+
Sbjct: 310 YGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMR 369
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDG-LKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+S N VTY LI LC GR+DD LK Q+++ EG I ++S++YGL +
Sbjct: 370 QQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMID---EGMTPDIFVFSSLVYGLCTVD 426
Query: 323 QQDEA----LEYLKQ---MEKLF------------------------------PRAVDRS 345
+ ++A E L Q ++ +F P + +
Sbjct: 427 KWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYN 486
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G C+ G +++A + D ++ G P+ V Y+ L+H YC+ R+ +A L +EM
Sbjct: 487 TLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK 546
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+NT+L GL + G A +L + I + Y+ +I LC+
Sbjct: 547 GLTPDVVTYNTILHGLFQTGRFSEAKELY---LSMINSRTQMNIYTYNIIINGLCKNNFV 603
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A + + K + D T N ++
Sbjct: 604 DEAFKMFHSLCSKDLQLDIFTANIMI 629
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 132/498 (26%), Positives = 224/498 (44%), Gaps = 38/498 (7%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI----DLARAFYRKKMMASGVQ--GD 80
+ND +K D + S++ FN +L + + +L + + + + ++
Sbjct: 32 LNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPS 91
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN-SVIYNTLIHSLCKNGKVGRARS-L 138
+TY IL+ C R+ GF ++ G + N +VI++ L+ LC +V A L
Sbjct: 92 SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151
Query: 139 MSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG---FVPDVVTITKVLEL 191
+ M E P+ ++SIL+ +C E+ AL LL G P+VVT T V++
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211
Query: 192 LCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPN 235
LC V A + + ++G +GK K + L+EM G P+
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
Y +L+ C+ G A ++F+ + GI N Y L+ G + G + + L
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLD 331
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
LM + I +N + ++ DEA+ +M ++L P V I C
Sbjct: 332 LMVGNGVSPDHHI--FNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCK 389
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G V+DA F+QMI+EG P++ ++ L++ C ++ +A EL E+ G
Sbjct: 390 LGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVF 449
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
FNT++ LCR+G V A +L++ +R G P Y+ L+ C G A+ LL
Sbjct: 450 FNTLMCNLCREGRVMEAQRLIDLMLR---VGVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506
Query: 474 QMVGKGILPDYLTWNSLL 491
+V G+ PD +T+N+LL
Sbjct: 507 VIVSIGLKPDKVTYNTLL 524
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 132/563 (23%), Positives = 225/563 (39%), Gaps = 113/563 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-----KEDIDL 63
P+ + TVI GL +A+M++ + + P+ + ++ + KE + +
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++M G+Q D Y YA+L+ LC R + + + +G+KPN IY L+
Sbjct: 260 L-----QEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILL 314
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H G + S + M P+ F+I+ CAY K+ + A+ + +K
Sbjct: 315 HGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLS 374
Query: 180 PDVVTITKVLELLCSVGRVMDAV-----------------------------------EI 204
P++VT +++ LC +GRV DAV E+
Sbjct: 375 PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEEL 434
Query: 205 LEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
E +QG R G+V R + M R G P+V +YN L+ +C
Sbjct: 435 FFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCL 494
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
TG +D A + + + G+ + VTY+TL+ G C RIDD + + M +G +
Sbjct: 495 TGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM--LMKGLTPDV 552
Query: 309 SPYNSVLYGLYRENQQDEALE----------------------------YLKQMEKLFPR 340
YN++L+GL++ + EA E ++ + K+F
Sbjct: 553 VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHS 612
Query: 341 AVDRSLKILGFCVD---------GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
+ L++ F + G EDA F + G VP+V Y + +E
Sbjct: 613 LCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 672
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV---GTALKLVEEDMRGIGRG---- 444
+ E EL M +G P + N ++ L +G++ G L ++E +
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNFSLEASTTSM 732
Query: 445 --SLPGSGHYSPLIKALCEKGGF 465
S+ G Y L K+L EK F
Sbjct: 733 LISIYSRGEYQQLAKSLPEKYHF 755
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 29/362 (8%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVVTITKVLELLCSVGRVMDAVE 203
P+ T++ILI +C+ L + G+ V D V +++L+ LC RV +A +
Sbjct: 90 PSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATD 149
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
IL L+ M GC P+V +Y+IL+ +C + AL++ + M
Sbjct: 150 IL------------------LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMA 191
Query: 264 IDG---ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DG + N VTY T+I GLC +D + Q M D +G + Y +++G
Sbjct: 192 DDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMID--KGVRPNNHTYTCLIHGYLS 249
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ E ++ L++M L P ++ + C +G +A+ FD +I +G PNV I
Sbjct: 250 IGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI 309
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y L+H Y E + E + M G+G P FN + ++ + A+ + ++ M
Sbjct: 310 YGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDK-M 368
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
R R S P Y LI ALC+ G A + QM+ +G+ PD ++SL+ L
Sbjct: 369 RQ-QRLS-PNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVD 426
Query: 499 TW 500
W
Sbjct: 427 KW 428
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 100/253 (39%), Gaps = 52/253 (20%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-ID 62
SI PD+ + T++ G +AR I+D + +TP + +N+IL L +
Sbjct: 510 SIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFS 569
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A+ Y M+ S Q + YTY I++ GLC N V + FK+ H + S+ ++ + N +
Sbjct: 570 EAKELYLS-MINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIM 628
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
I +L K G+ KE+ A+ L ++G VPDV
Sbjct: 629 IGALLKGGR---------------------------KED----AMDLFATISAYGLVPDV 657
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T + E L G LEE E ME G PN N L
Sbjct: 658 ETYCLIAENLIKEGS-------LEELDE------------LFSAMEENGTAPNSRMLNAL 698
Query: 243 ISSYCETGVLDSA 255
+ G ++ A
Sbjct: 699 VRWLLHRGDINRA 711
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 213/491 (43%), Gaps = 67/491 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + VI G+ RA D V+ D ++ + P+ +N+++D +K
Sbjct: 12 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK--------- 62
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
G D + GF+L M G+KPN++ YN L+ LC
Sbjct: 63 -----------GGD---------------LEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 96
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++G +L+ +M P+ T+SIL + + L L K G
Sbjct: 97 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 156
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +L LC G+V A E+L+ + G +P YN LI
Sbjct: 157 TCSILLNGLCKDGKVSIAEEVLQS-------------------LVNAGLVPTRVIYNTLI 197
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+TG L+ A F MK I + +TY+ LI GLC RI + +L M+D+ G
Sbjct: 198 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN--G 255
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ +N+++ R Q ++ L +M++ L P V + FC +G + +A
Sbjct: 256 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 315
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
D M + +PN +Y+ +I AY + +A L+++M +G P T+N ++ GL
Sbjct: 316 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C Q + A EE + + L P + Y+ LI A C +G A L +M GI
Sbjct: 376 CNQSQISEA----EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431
Query: 481 LPDYLTWNSLL 491
T++ L+
Sbjct: 432 KSTVRTYHQLI 442
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 196/420 (46%), Gaps = 32/420 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL RA + + D ++ M P ++ + D L + A
Sbjct: 83 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 142
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + +GV DYT +IL+ GLC +V ++L + + G+ P VIYNTLI+ C+
Sbjct: 143 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 202
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A S M+ +P+ +T++ LI CK E + NA LL + G P V T
Sbjct: 203 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 262
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ G++ +L E E G + GK+ L +M
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K LPN YN +I +Y E G D A + MK +GIS + VTY+ LI+GLC+ +I
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
+ +I+ + S R+ P YN+++ D+AL+ ++M K ++ R
Sbjct: 383 EAEEIINSL------SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVR 436
Query: 345 SLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G G + + + + +M++ VP+ I++ ++ AY + +A +L KEM
Sbjct: 437 TYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN Y+ +I + R +A E+ EMT LP T+NT++ G + G++ +L
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
++ + G P + Y+ L+ LC G S LL +M + ++PD T++ L
Sbjct: 73 RDQ---MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129
Query: 494 LSQQ 497
LS+
Sbjct: 130 LSRN 133
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 213/491 (43%), Gaps = 67/491 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + VI G+ RA D V+ D ++ + P+ +N+++D +K
Sbjct: 60 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK--------- 110
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
G D + GF+L M G+KPN++ YN L+ LC
Sbjct: 111 -----------GGD---------------LEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 144
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++G +L+ +M P+ T+SIL + + L L K G
Sbjct: 145 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 204
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +L LC G+V A E+L+ + G +P YN LI
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQS-------------------LVNAGLVPTRVIYNTLI 245
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+TG L+ A F MK I + +TY+ LI GLC RI + +L M+D+ G
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN--G 303
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ +N+++ R Q ++ L +M++ L P V + FC +G + +A
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
D M + +PN +Y+ +I AY + +A L+++M +G P T+N ++ GL
Sbjct: 364 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C Q + A EE + + L P + Y+ LI A C +G A L +M GI
Sbjct: 424 CNQSQISEA----EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479
Query: 481 LPDYLTWNSLL 491
T++ L+
Sbjct: 480 KSTVRTYHQLI 490
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 196/420 (46%), Gaps = 32/420 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL RA + + D ++ M P ++ + D L + A
Sbjct: 131 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 190
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + +GV DYT +IL+ GLC +V ++L + + G+ P VIYNTLI+ C+
Sbjct: 191 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 250
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A S M+ +P+ +T++ LI CK E + NA LL + G P V T
Sbjct: 251 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 310
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ G++ +L E E G + GK+ L +M
Sbjct: 311 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K LPN YN +I +Y E G D A + MK +GIS + VTY+ LI+GLC+ +I
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
+ +I+ + S R+ P YN+++ D+AL+ ++M K ++ R
Sbjct: 431 EAEEIINSL------SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVR 484
Query: 345 SLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G G + + + + +M++ VP+ I++ ++ AY + +A +L KEM
Sbjct: 485 TYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 151/369 (40%), Gaps = 55/369 (14%)
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKV 217
S G PD K ++ + G + +AV +L G G R G+
Sbjct: 20 SAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRG 79
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
EM + LPN TYN +I + + G L++ + + M G+ N +TY+ L
Sbjct: 80 GDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVL 139
Query: 278 IRGLCSGGRIDDGLKILQLMEDSK---EG---------------SKGRISPYNS------ 313
+ GLC GR+ + +L M K +G SK +S +
Sbjct: 140 LSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 199
Query: 314 ---------VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+L GL ++ + A E L+ + L P V + I G+C G +E A
Sbjct: 200 TIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 259
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F QM P+ + Y+ LI+ C+ ER+ A +L+ EM +G P TFNT++
Sbjct: 260 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 319
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R G + ++ E G P Y ++ A C+ G A +L M K +LP
Sbjct: 320 RTGQLEKCFIVLSEMQE---NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 376
Query: 483 DYLTWNSLL 491
+ +N+++
Sbjct: 377 NAQVYNAII 385
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN Y+ +I + R +A E+ EMT LP T+NT++ G + G++ +L
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
++ + G P + Y+ L+ LC G S LL +M + ++PD T++ L
Sbjct: 121 RDQ---MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 177
Query: 494 LSQQ 497
LS+
Sbjct: 178 LSRN 181
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 182/374 (48%), Gaps = 12/374 (3%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++MM+ G D TY+ ++ LC ++V F+L MK G+ P+ Y TL+ CK
Sbjct: 111 REMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKV 170
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR+ +M++ PN VT++ LI AY K L A + E S G VP++VT
Sbjct: 171 GLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTY 230
Query: 186 TKVLELLCSVGRVMDAVEILEE-SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C G A +I ++ + V R + ++ PNV TY L+
Sbjct: 231 TALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE---PNVVTYGALVD 287
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ + A D+ M ++G N + YD LI G C G++D+ ++ M G
Sbjct: 288 GLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM--LGHGC 345
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+S++ L+++ + D AL+ L +M P V + + G C G ++A R
Sbjct: 346 SPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYR 405
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
M E+G PNVV Y +I + + RV EL++ MT G P T+ +++ C
Sbjct: 406 LMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCC 465
Query: 423 RQGNVGTALKLVEE 436
G + A KL+EE
Sbjct: 466 AAGLLDDAHKLLEE 479
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 206/431 (47%), Gaps = 50/431 (11%)
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEE 161
+M + G P+ +I+N+L+H+ C++G A L+ M +P V ++ILI C E
Sbjct: 1 MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60
Query: 162 NLVNALV--LLEKSFS----FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL- 214
+L + V L E++++ G V + V + LC +G+ A ++ E +G +
Sbjct: 61 DLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIP 120
Query: 215 ---------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
KV+ + +EM+R G P+V TY L+ +C+ G+++ A + F
Sbjct: 121 DSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWF 180
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M+ DG + N VTY LI ++ +I ++M + G I Y +++ G
Sbjct: 181 DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN--GCVPNIVTYTALIDGHC 238
Query: 320 RENQQDEALEYLKQMEK---------LFPRAVDRSLK----------ILGFCVDGNVEDA 360
+ + ++A + +M+ ++ R VD LK + G C V++A
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ + M EG PN +IYD LI +C+ ++ EA E+ +M GHG P T+++++
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
L + + ALK++ + + P Y+ ++ LC+ G A L++ M KG
Sbjct: 359 LFKDKRLDLALKVL---TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGC 415
Query: 481 LPDYLTWNSLL 491
P+ +T+ +++
Sbjct: 416 YPNVVTYTAMI 426
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 209/513 (40%), Gaps = 90/513 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSIL-------DVLVK 58
P IF +++ R+ D A L+ + P ++N ++ D+
Sbjct: 9 PSPMIFNSLVHAYCRS---GDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
E I LA Y + M+ GV + + LC + + ++ M S+G P+S
Sbjct: 66 EVIGLAERAYNE-MLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSST 124
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
Y+ +I LC KV +A L +M+ G
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRN-------------------------------GI 153
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PDV T T +L+ C VG + EQ R + EM++ GC PNV T
Sbjct: 154 TPDVYTYTTLLDRFCKVGLI-----------EQAR--------NWFDEMQQDGCAPNVVT 194
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y LI +Y +T L A ++F M +G N VTY LI G C G + +I M+
Sbjct: 195 YTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMK 254
Query: 299 DSK---------------EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
+ K E + + Y +++ GL + ++ EA + L+ M E P
Sbjct: 255 NDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQ 314
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I GFC G +++A+ F +M+ G PNV Y LI +++R+ A +++ +
Sbjct: 315 IIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTK 374
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKL---VEEDMRGIGRGSLPGSGHYSPLIKA 458
M + P + ++ GLC+ G A +L +EE +G P Y+ +I
Sbjct: 375 MLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE------KGCYPNVVTYTAMIDG 428
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G LL M KG P+++T+ L+
Sbjct: 429 FGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 218/510 (42%), Gaps = 56/510 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD S + VI L A + + + R +TP + + ++LD K I+ AR +
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNW 179
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G + TY L+ T ++ ++ +M S G PN V Y LI C
Sbjct: 180 F-DEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238
Query: 128 KNGKVGRA---------------------RSLMSDMEEPNDVTFSILICAYCKEENLVNA 166
K G+ +A R + S+++EPN VT+ L+ CK + A
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
LLE G P+ + +++ C VG++ +A E+ +
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV-------------------FTK 339
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M GC PNV TY+ LI + LD AL V M + + N V Y ++ GLC G+
Sbjct: 340 MLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGK 399
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
D+ +++ +ME+ +G + Y +++ G + + D LE L+ M + P +
Sbjct: 400 TDEAYRLMLMMEE--KGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITY 457
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I C G ++DA + ++M + ++ +Y +I + E + L+ E++
Sbjct: 458 RVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE--FVASLGLLAELSE 515
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G +PI + ++ + G + AL+L EE + S Y LI++L
Sbjct: 516 DGSVPILPVYKLLIDNFIKAGRLEMALELHEE----LSSFSAAYQNTYVSLIESLTLACK 571
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICL 494
A L M +G +P+ S+L+CL
Sbjct: 572 VDKAFKLYSDMTRRGFVPEL----SMLVCL 597
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 175/393 (44%), Gaps = 64/393 (16%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ GLC ++V + LL M G +PN +IY+ LI CK GK+ A+ + + M
Sbjct: 281 TYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
PN T+S LI K++ L AL +L K P+VV T++++ LC VG+
Sbjct: 341 LGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKT 400
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+A R + ME KGC PNV TY +I + + G +D L++
Sbjct: 401 DEAY-------------------RLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLEL 441
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
M G + NF+TY LI C+ G +DD K+L+ M+ + Y G+
Sbjct: 442 LQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQT----------YWPKHIGM 491
Query: 319 YRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
YR+ + + E++ SL +L ++ E+G VP + +
Sbjct: 492 YRKVIEGFSHEFVA------------SLGLLA---------------ELSEDGSVPILPV 524
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y LI + + R+ A EL +E++ +T+ +++ L V A KL +
Sbjct: 525 YKLLIDNFIKAGRLEMALELHEELSSFS-AAYQNTYVSLIESLTLACKVDKAFKLYSDMT 583
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
R RG +P LIK L G ++ A L
Sbjct: 584 R---RGFVPELSMLVCLIKGLLRVGKWEEALQL 613
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 127/314 (40%), Gaps = 54/314 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P++ I+ +I G + +++ + + +P++ ++S++D L K+ +DLA
Sbjct: 312 PNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKV 371
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM+ + + Y ++ GLC + + ++L+ +M+ +G PN V Y +I
Sbjct: 372 L-TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFG 430
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK----------- 172
K G+V R L+ M PN +T+ +LI C L +A LLE+
Sbjct: 431 KAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIG 490
Query: 173 -------SFSFGFVPDV-----------VTITKVLELLC----SVGRVMDAVEILEE--- 207
FS FV + V I V +LL GR+ A+E+ EE
Sbjct: 491 MYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSS 550
Query: 208 --SGEQGRL----------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
+ Q KV + +M R+G +P + LI G + A
Sbjct: 551 FSAAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEA 610
Query: 256 LDVFNDMKIDGISW 269
L + + + I W
Sbjct: 611 LQLSDSICQMDIHW 624
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 220/461 (47%), Gaps = 38/461 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKAT--DLVSR-FNMTPSLKIFNSILDVLVKEDI-DLAR 65
D + +I GL + R D K ++VS N+ P + ++ + V+ KE + + A+
Sbjct: 311 DNHTYSLLIDGLLKGRNA-DAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAK 367
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + M+ASG+ YA L++G C V G++LL MK R + + Y T++
Sbjct: 368 ALF-DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+C +G + A +++ +M PN V ++ LI + + +A+ +L++ G PD
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ ++ L R+ +A FL EM G PN TY
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARS-------------------FLVEMVENGLKPNAFTYGA 527
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
IS Y E SA +M+ G+ N V LI C G++ + + M D
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-- 585
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G G Y ++ GL++ ++ D+A E ++M + + P + I GF GN++
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A FD+M+EEG PNV+IY+ L+ +C+ + +A EL+ EM+ G P A T+ T++
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
G C+ G++ A +L +E M+ +G +P S Y+ L+ C
Sbjct: 706 GYCKSGDLAEAFRLFDE-MK--LKGLVPDSFVYTTLVDGCC 743
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 222/491 (45%), Gaps = 31/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + ++I G R + + + + + N+ S + +++ + D+D A
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M+ASG + + Y L+K +R GD ++L MK +G+ P+ YN+LI L
Sbjct: 440 V-KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ ARS + +M E PN T+ I Y + +A +++ G +P+ V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C G+V++A C + M +G L + TY +L+
Sbjct: 559 LCTGLINEYCKKGKVIEA-------------------CSAYRSMVDQGILGDAKTYTVLM 599
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + +D A ++F +M+ GI+ + +Y LI G G + I M +EG
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM--VEEG 657
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN +L G R + ++A E L +M + L P AV I G+C G++ +A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R FD+M +G VP+ +Y L+ C+ V A + G + FN +++ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWV 776
Query: 422 CRQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+ G +++ M G R P Y+ +I LC++G ++A L QM +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 481 LPDYLTWNSLL 491
+P +T+ SLL
Sbjct: 837 MPTVITYTSLL 847
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 193/429 (44%), Gaps = 30/429 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M+ G+ YTY +L+ GLC R+ D LL M S GV ++ Y+ LI L K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A+ L+ +M + IC KE + A L + + G +P
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++E C R V+ G L EM+++ + + TY ++
Sbjct: 385 YASLIEGYC-------------------REKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C +G LD A ++ +M G N V Y TLI+ R D +++L+ M++ +G
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE--QGI 483
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YNS++ GL + + DEA +L +M + L P A I G+ A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E G +PN V+ LI+ YC++ +V EA + M G L A T+ +++GL
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ V A ++ E MR G+G P Y LI + G Q AS + +MV +G+ P
Sbjct: 604 KNDKVDDAEEIFRE-MR--GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 483 DYLTWNSLL 491
+ + +N LL
Sbjct: 661 NVIIYNMLL 669
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 227/507 (44%), Gaps = 33/507 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ I+ T+I+ + D ++ + + P + +NS++ L K + +D AR+F
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ +G++ + +TY + G + K + M+ GV PN V+ LI+ C
Sbjct: 510 LVE-MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GKV A S M + + T+++L+ K + + +A + + G PDV
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ +G + A I +E E+G R G+++ L EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG PN TY +I YC++G L A +F++MK+ G+ + Y TL+ G C R+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RL 745
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLF-----PRA 341
+D + + + +K+G +P+N+++ +++ + + E L + M+ F P
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ I C +GN+E AK F QM +P V+ Y L++ Y + R E + E
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRGIGRGSLPGSGHYSPLIKAL 459
G P ++ +++ ++G AL LV++ + G L+
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLT 486
+ G + A ++ MV +PD T
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 193/442 (43%), Gaps = 52/442 (11%)
Query: 94 TNRVGDGFKLLHVMK---SRGVKPNSV-IYNTLIHSLCKNGKVGRARSLMSDMEEPN--- 146
+ RV D KLL S+ V + ++ L LC G +A S++ M E N
Sbjct: 71 SKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPV 130
Query: 147 -DVTFSILICA---YCKEENLVNALVLLEKSFSFGFVPDVVTI---TKVLELLCSVGRVM 199
+V SI+ C+ K ++ V +L + + G++ + V + + LEL+ + R
Sbjct: 131 AEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCK 190
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL------- 252
++ L R ++ K M + + +V TY++LI ++C G +
Sbjct: 191 VLLDALL------RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL 244
Query: 253 --------------DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
D AL + M G+ TYD LI GLC R++D +L M+
Sbjct: 245 FKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVD 354
G Y+ ++ GL + D A + +M + P D + ++ +
Sbjct: 305 SL--GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS--KE 360
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +E AK FD MI G +P Y LI YC+E+ VR+ EL+ EM + T+
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
TV+ G+C G++ A +V+E I G P Y+ LIK + F A +L +
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKE---MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M +GI PD +NSL+I LS+
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSK 499
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 198/419 (47%), Gaps = 41/419 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P+ S T++ GL I + A L P L S ++L++ RA
Sbjct: 58 PNASTMNTLLLGLCE---IGQMSSALKLFREMQAGPFLPTSAS-HNILLRGFFMAGRAIE 113
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M ASGV+ D +Y IL+ L + R+ + L M P+ + YN L+ C
Sbjct: 114 FFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYC 170
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ A+SLM ++ EPN T+SI+I YCK + + A + K VP+ V
Sbjct: 171 KIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV 230
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C G + DA+++ EME+ GC + TYN LI
Sbjct: 231 TFNTLIAGFCKAGMLEDAIKLF-------------------AEMEKIGCKATIVTYNTLI 271
Query: 244 SSYCET-GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
S C+ G + +A+D+FN ++ G++ VTY++LI+G R +DGL++L M E
Sbjct: 272 DSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMH--AE 327
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G K + YN ++ GL N+ ++A M P + I G C VE+A+
Sbjct: 328 GCKPDVITYNCLISGLCSANRVEDAQRLFNGM-ACAPNVTTFNFLIRGLCAQKKVEEARN 386
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
D+M P++ ++ +I A+C+ + +A E+MK+M HG+ P T + G+
Sbjct: 387 ILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGI 441
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 200/441 (45%), Gaps = 37/441 (8%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+++A + +TY +L++G C ++ + MKS G+ PN+ NTL+ LC+
Sbjct: 14 KEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEI 73
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G++ A L +M+ P + +IL+ + + ++ S G PD+ +
Sbjct: 74 GQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMKAS---GVEPDLESY 130
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG-------------RLGKVKGGCRFLKEMERKGC 232
+L L GR+ +A + ++G+ +KE+ + G
Sbjct: 131 HILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 190
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PNV TY+I+I+ YC+ ++ A +VF M N VT++TLI G C G ++D +K
Sbjct: 191 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 250
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ-DEALEYLKQME--KLFPRAVDRSLKIL 349
+ ME K G K I YN+++ L ++ A++ ++E L P V + I
Sbjct: 251 LFAEME--KIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 308
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GF N D R M EG P+V+ Y+CLI C RV +A L G P
Sbjct: 309 GFSERAN--DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFN---GMACAP 363
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
+TFN ++ GLC Q K VEE + R + P ++ +I A C+ G A
Sbjct: 364 NVTTFNFLIRGLCAQ-------KKVEEARNILDRMTAPDMTTFNTIILAFCKAGAMHDAR 416
Query: 470 MLLVQMVGKGILPDYLTWNSL 490
++ M+ G P+ T +L
Sbjct: 417 EVMKDMLKHGFYPNTYTTYAL 437
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 51/323 (15%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R KE+ PN TYN+LI +C+ G + A+ VF+DMK G+ N T +TL+ GL
Sbjct: 11 RLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGL 70
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK- 336
C G++ LK+ + M+ G P +N +L G + + A+E+ K+M+
Sbjct: 71 CEIGQMSSALKLFREMQ------AGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKAS 121
Query: 337 ---------------------------LF------PRAVDRSLKILGFCVDGNVEDAKRC 363
LF P + ++ + G+C G +A+
Sbjct: 122 GVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSL 181
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
++++ G PNV Y +I+ YC+ ++V EA E+ +M +P A TFNT+++G C+
Sbjct: 182 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 241
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK-GGFQSASMLLVQMVGKGILP 482
G + A+KL E M IG + + Y+ LI +LC+K GG +A L ++ G G+ P
Sbjct: 242 AGMLEDAIKLFAE-MEKIGCKATIVT--YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP 298
Query: 483 DYLTWNSLLICLSQQTTWLLLLL 505
+T+NSL+ S++ L LL
Sbjct: 299 TIVTYNSLIQGFSERANDGLRLL 321
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 165/359 (45%), Gaps = 35/359 (9%)
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+ +++ + PN T+++LI +CK + A+ + S G +P+ T+ +L LC +
Sbjct: 14 KEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEI 73
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G++ A+++ +EM+ LP ++NIL+ + G A
Sbjct: 74 GQMSSALKLF-------------------REMQAGPFLPTSASHNILLRGFFMAG---RA 111
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
++ F +MK G+ + +Y L+ L GR+ + + M S + I YN ++
Sbjct: 112 IEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPD-----IMTYNVLM 166
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G + Q EA +K++ K P S+ I +C VE+A F +MIE V
Sbjct: 167 DGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCV 226
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ-GNVGTALK 432
PN V ++ LI +C+ + +A +L EM G T+NT++ LC++ G V TA+
Sbjct: 227 PNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD 286
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L + G G P Y+ LI+ E+ LL M +G PD +T+N L+
Sbjct: 287 LFN---KLEGAGLTPTIVTYNSLIQGFSERA--NDGLRLLCHMHAEGCKPDVITYNCLI 340
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%), Gaps = 16/227 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN- 129
KM+ S + T+ L+ G C + D KL M+ G K V YNTLI SLCK
Sbjct: 219 KMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 278
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G V A L + +E P VT++ LI + + N + L LL + G PDV+T
Sbjct: 279 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN--DGLRLLCHMHAEGCKPDVITY 336
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGK----VKGGCRFLKEMERKGCL-----PNV 236
++ LCS RV DA + + ++G C K E + L P++
Sbjct: 337 NCLISGLCSANRVEDAQRLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTAPDM 396
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
T+N +I ++C+ G + A +V DM G N T L G+ S
Sbjct: 397 TTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQS 443
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ A R F +++ PN Y+ LI +C+ ++ +A + +M G LP AST NT+
Sbjct: 7 DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
L GLC G + +ALKL E G LP S ++ L++ G A +M
Sbjct: 67 LLGLCEIGQMSSALKLFREMQAG---PFLPTSASHNILLRGFFMAG---RAIEFFKEMKA 120
Query: 478 KGILPDYLTWNSLLICLS 495
G+ PD +++ LL LS
Sbjct: 121 SGVEPDLESYHILLSALS 138
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 213/491 (43%), Gaps = 67/491 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + VI G+ RA D V+ D ++ + P+ +N+++D +K
Sbjct: 197 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIK--------- 247
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
G D + GF+L M G+KPN++ YN L+ LC
Sbjct: 248 -----------GGD---------------LEAGFRLRDQMVCHGLKPNAITYNVLLSGLC 281
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++G +L+ +M P+ T+SIL + + L L K G
Sbjct: 282 RAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY 341
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +L LC G+V A E+L+ + G +P YN LI
Sbjct: 342 TCSILLNGLCKDGKVSIAEEVLQS-------------------LVNAGLVPTRVIYNTLI 382
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ YC+TG L+ A F MK I + +TY+ LI GLC RI + +L M+D+ G
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN--G 440
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ +N+++ R Q ++ L +M++ L P V + FC +G + +A
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
D M + +PN +Y+ +I AY + +A L+++M +G P T+N ++ GL
Sbjct: 501 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 560
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
C Q + A EE + + L P + Y+ LI A C +G A L +M GI
Sbjct: 561 CNQSQISEA----EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616
Query: 481 LPDYLTWNSLL 491
T++ L+
Sbjct: 617 KSTVRTYHQLI 627
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 196/420 (46%), Gaps = 32/420 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL RA + + D ++ M P ++ + D L + A
Sbjct: 268 PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSL 327
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K + +GV DYT +IL+ GLC +V ++L + + G+ P VIYNTLI+ C+
Sbjct: 328 FGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQ 387
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A S M+ +P+ +T++ LI CK E + NA LL + G P V T
Sbjct: 388 TGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVET 447
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ G++ +L E E G + GK+ L +M
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K LPN YN +I +Y E G D A + MK +GIS + VTY+ LI+GLC+ +I
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
+ +I+ + S R+ P YN+++ D+AL+ ++M K ++ R
Sbjct: 568 EAEEIINSL------SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVR 621
Query: 345 SLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G G + + + + +M++ VP+ I++ ++ AY + +A +L KEM
Sbjct: 622 TYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 151/369 (40%), Gaps = 55/369 (14%)
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKV 217
S G PD K ++ + G + +AV +L G G R G+
Sbjct: 157 SAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRG 216
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
EM + LPN TYN +I + + G L++ + + M G+ N +TY+ L
Sbjct: 217 GDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVL 276
Query: 278 IRGLCSGGRIDDGLKILQLMEDSK---EG---------------SKGRISPYNS------ 313
+ GLC GR+ + +L M K +G SK +S +
Sbjct: 277 LSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 336
Query: 314 ---------VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+L GL ++ + A E L+ + L P V + I G+C G +E A
Sbjct: 337 TIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFS 396
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F QM P+ + Y+ LI+ C+ ER+ A +L+ EM +G P TFNT++
Sbjct: 397 TFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYG 456
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R G + ++ E G P Y ++ A C+ G A +L M K +LP
Sbjct: 457 RTGQLEKCFIVLSEMQE---NGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 513
Query: 483 DYLTWNSLL 491
+ +N+++
Sbjct: 514 NAQVYNAII 522
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 35/227 (15%)
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDGN 356
+ G++ +N + EA+ L++M + P A ++ I G G
Sbjct: 156 ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGR 215
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
DA FD+M E +PN + Y+ +I + + + L +M HG P A T+N
Sbjct: 216 GGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNV 275
Query: 417 VLSGLCRQGNVGTALKLVEE--------------------DMRGIGRGSLPGSGHY---- 452
+LSGLCR G +G L++E G + L G Y
Sbjct: 276 LLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 335
Query: 453 --------SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
S L+ LC+ G A +L +V G++P + +N+L+
Sbjct: 336 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 347 KILGFCVD-GNVEDAKRCFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTG 404
K + CV G++ +A +M +G P N Y+ +I + R +A E+ EMT
Sbjct: 169 KAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTE 228
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
LP T+NT++ G + G++ +L ++ + G P + Y+ L+ LC G
Sbjct: 229 RAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ---MVCHGLKPNAITYNVLLSGLCRAGR 285
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
S LL +M + ++PD T++ L LS+
Sbjct: 286 MGETSALLDEMASQKMVPDGFTYSILFDGLSRN 318
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 222/477 (46%), Gaps = 31/477 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
++R +N+ V + +TPS N +L++ V+ I+ A + +M
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVF-DEMSVR 812
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV D +Y +++ G ++ + + L M RG P++ ++ +LC+NG V RA
Sbjct: 813 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 872
Query: 136 ----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R ++ +PN + F+ LI CK+ ++ A +LE+ G+ P+V T T +++
Sbjct: 873 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 932
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC G A + FLK + PNV TY +I YC+
Sbjct: 933 LCKRGWTEKAFRL------------------FLKLVRSDTYKPNVHTYTSMIGGYCKEDK 974
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
L+ A +F+ MK G+ N TY TLI G C G +++ LM D EG I Y
Sbjct: 975 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD--EGFMPNIYTY 1032
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N+ + L ++++ EA E L + L V ++ I C ++ A F +M +
Sbjct: 1033 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 1092
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G ++ + + LI A+C++++++E+ L + + G +P T+ +++S C++G++
Sbjct: 1093 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 1152
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
ALK R G +P S Y LI LC+K A L M+ +G+ P +T
Sbjct: 1153 ALKYFHNMKR---HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 1206
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 215/512 (41%), Gaps = 38/512 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD S + ++ G R I + + T ++ R P IL L + + +
Sbjct: 816 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIW 874
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +KM+ G + + + L+ GLC + F++L M G KPN + LI LC
Sbjct: 875 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 934
Query: 128 KNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A L SD +PN T++ +I YCKE+ L A +L + G P+V
Sbjct: 935 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 994
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T ++ C G A E++ G++G +PN+ TYN
Sbjct: 995 NTYTTLINGHCKAGSFGRAYELMNLMGDEG-------------------FMPNIYTYNAA 1035
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I S C+ A ++ N G+ + VTY LI+ C I+ L M +K
Sbjct: 1036 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM--NKT 1093
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNVED 359
G + + N ++ R+ + E+ E L Q+ L P + I +C +G+++
Sbjct: 1094 GFEADMRLNNILIAAFCRQKKMKES-ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 1152
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + F M G VP+ Y LI C++ V EA +L + M G P T T+
Sbjct: 1153 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 1212
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C++ + A+ L+E + + ++ L++ LC + A++ +++ K
Sbjct: 1213 EYCKRNDSANAMILLEPLDKKLWIRTV------RTLVRKLCSEKKVGVAALFFQKLLEKD 1266
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
D +T + S+ L+ L E +S
Sbjct: 1267 SSADRVTLAAFTTACSESGKNNLVTDLTERIS 1298
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 140/302 (46%), Gaps = 19/302 (6%)
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L E GRL + G + +M+ +G P+ T N ++ E G+++ A +VF++M
Sbjct: 754 MLRNFSEIGRLNEAVG---MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMS 810
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS----VLYGLY 319
+ G+ + +Y ++ G G+I + + L M +G I P N+ +L L
Sbjct: 811 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGM-----IQRGFI-PDNATCTLILTALC 864
Query: 320 RENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ A+ Y ++M L P ++ + I G C G+++ A ++M+ G PNV
Sbjct: 865 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 924
Query: 378 IYDCLIHAYCQEERVREASEL-MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ LI C+ +A L +K + Y P T+ +++ G C++ + A L
Sbjct: 925 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFS- 983
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
R +G P Y+ LI C+ G F A L+ M +G +P+ T+N+ + L +
Sbjct: 984 --RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 1041
Query: 497 QT 498
++
Sbjct: 1042 KS 1043
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMR 439
C++ + + R+ EA ++ +M G P + T N VL G + A + +E +R
Sbjct: 753 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 812
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G+ +P S Y ++ G Q A L M+ +G +PD T +L L +
Sbjct: 813 GV----VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCEN 866
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 32/447 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLCK 128
+M G + ++Y+I++KGLC + L +M G PN V YNT+IH K
Sbjct: 218 RMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFK 277
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ G+A SL +M +P+ VT++++I A CK + A ++L + + G PD VT
Sbjct: 278 EGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVT 337
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ ++GR+ +A ++ + +G + G+ K M
Sbjct: 338 YNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMT 397
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P++ +Y L+ Y G + +FN MK +GI+ + ++ LI G +D
Sbjct: 398 AKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVD 457
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
D + I M+ ++G + Y++V+ R + +A+E QM + P
Sbjct: 458 DAMLIFTEMQ--QQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHS 515
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEG-GVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I GFC+ G + AK +MI +G P++V ++ +I++ C++ RV +A ++ +T
Sbjct: 516 IIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI 575
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P TF +++ G C G + A K+++ ++ G+ + YS L+ + G
Sbjct: 576 GERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVT----YSTLLDGYFKNGR 631
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
L +M KG+ P+ +T+ +L
Sbjct: 632 INDGLTLFREMQRKGVKPNTVTYGIML 658
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 203/449 (45%), Gaps = 37/449 (8%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFK-LLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ +G++ T + L+K LC NR + LLH M G PN Y+ ++ LC N
Sbjct: 183 ILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNS 242
Query: 131 KVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
RA L M + PN V ++ +I + KE A L + G PDVVT
Sbjct: 243 MSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVT 302
Query: 185 ITKVLELLCSVGRVMDAVEI----LEESGEQ-------------GRLGKVKGGCRFLKEM 227
+++ LC R MD E+ + +G Q LG++K + ++M
Sbjct: 303 YNLIIDALCK-ARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKM 361
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ +G +PN+ N ++S C+ G A ++F+ M G + V+Y TL+ G S G
Sbjct: 362 KSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWF 421
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D + + M+ + + R+ +N +++ + D+A+ +M++ + P V S
Sbjct: 422 ADMIGLFNSMKSNGIAADCRV--FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYS 479
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I F G + DA F+QM+ G PN +Y +I +C + +A EL+ EM
Sbjct: 480 TVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK 539
Query: 406 GY-LPIASTFNTVLSGLCRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P FN+V++ LC+ G V A + + D+ G P ++ LI C
Sbjct: 540 GIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDI-----GERPDVITFTSLIDGYCLV 594
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A +L M G+ D +T+++LL
Sbjct: 595 GKMDKAFKILDAMEVVGVETDIVTYSTLL 623
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/522 (25%), Positives = 230/522 (44%), Gaps = 38/522 (7%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+ PD + +I G + + K + + P++ I NS L L K A
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M A G + D +Y L+ G D L + MKS G+ + ++N LIH+
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G V A + ++M++ P+ VT+S +I A+ + L +A+ + + G P+
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFLK 225
+++ C G ++ A E++ E +G + G+V
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+ G P+V T+ LI YC G +D A + + M++ G+ + VTY TL+ G G
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNG 630
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
RI+DGL + + M+ ++G K Y +L GL+R + A K+ ++ +
Sbjct: 631 RINDGLTLFREMQ--RKGVKPNTVTYGIMLAGLFRAGRTVAA---RKKFHEMIESGTTVT 685
Query: 346 LKILGFCVDGNVEDAKRCFDQMI---EEGGVPNV----VIYDCLIHAYCQEERVREASEL 398
+ I G + G + C D+ I ++ G NV I + +I+A + +R EA EL
Sbjct: 686 VSIYGIILGGLCRN--NCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++ G LP ST+ ++ L + G V A + + G +PGS + +I+
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKS---GIVPGSRLLNRIIRM 800
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
L EKG A L ++ GK IL + T + +L S++ +
Sbjct: 801 LLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKY 842
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 204/449 (45%), Gaps = 25/449 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T++ G D++ + + + ++FN ++ K +
Sbjct: 403 PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLI 462
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M GV D TY+ ++ R+ D + + M +RG++PN+ +Y+++I C
Sbjct: 463 FTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCM 522
Query: 129 NGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G + +A+ L+S+M P+ V F+ +I + CK+ +++A + + G PDV+
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVI 582
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ C VG++ A +IL+ G + G++ G +EM
Sbjct: 583 TFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREM 642
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+RKG PN TY I+++ G +A F++M G + Y ++ GLC
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D+ + + Q + K I+ N+++ +Y+ +++EA E + L P
Sbjct: 703 DEAIILFQKL--GTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYG 760
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I+ DG VEDA F M + G VP + + +I ++ + +A + ++ G
Sbjct: 761 VMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGK 820
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLV 434
L AST + +LS R+G +KL+
Sbjct: 821 RILLEASTTSLMLSLFSRKGKYHEDMKLL 849
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 140/349 (40%), Gaps = 66/349 (18%)
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T+SIL+ C+ LVL G +T + +L+ LC R +AV +L
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL--- 215
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
L M GC+PNV +Y+I++
Sbjct: 216 ---------------LHRMSELGCVPNVFSYSIIL------------------------- 235
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQ 324
+GLC L + Q+M +KEG G SP YN+V++G ++E +
Sbjct: 236 ----------KGLCDNSMSQRALDLFQMM--AKEG--GACSPNVVAYNTVIHGFFKEGET 281
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+A +M + + P V +L I C ++ A+ QM G P+ V Y+C+
Sbjct: 282 GKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCM 341
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
IH Y R++EA+++ ++M G +P N+ L+ LC+ G A ++ +
Sbjct: 342 IHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDS---MTA 398
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P Y L+ +G F L M GI D +N L+
Sbjct: 399 KGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILI 447
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 12/297 (4%)
Query: 222 RFLKEMERKGCLP-NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
R +E +P V TY+IL+ C D L +F + G+ + +T TL++
Sbjct: 142 RVCREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKC 201
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---- 336
LC R ++ + +L L S+ G + Y+ +L GL + AL+ + M K
Sbjct: 202 LCYANRTEEAVNVL-LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGA 260
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V + I GF +G A F +M +G P+VV Y+ +I A C+ + +A
Sbjct: 261 CSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAE 320
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
++++MT +G P T+N ++ G G + A K+ + M+ RG +P + +
Sbjct: 321 LVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRK-MK--SRGLIPNIVICNSFL 377
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL--LLLLLNEMVS 511
+LC+ G + A+ + M KG PD +++ +LL + + W ++ L N M S
Sbjct: 378 ASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASE-GWFADMIGLFNSMKS 433
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 220/461 (47%), Gaps = 38/461 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKAT--DLVSR-FNMTPSLKIFNSILDVLVKEDI-DLAR 65
D + +I GL + R D K ++VS N+ P + ++ + V+ KE + + A+
Sbjct: 311 DNHTYSLLIDGLLKGRNA-DAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAK 367
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + M+ASG+ YA L++G C V G++LL MK R + + Y T++
Sbjct: 368 ALF-DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+C +G + A +++ +M PN V ++ LI + + +A+ +L++ G PD
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ ++ L R+ +A FL EM G PN TY
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARS-------------------FLVEMVENGLKPNAFTYGA 527
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
IS Y E SA +M+ G+ N V LI C G++ + + M D
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-- 585
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G G Y ++ GL++ ++ D+A E ++M + + P + I GF GN++
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A FD+M+EEG PNV+IY+ L+ +C+ + +A EL+ EM+ G P A T+ T++
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
G C+ G++ A +L +E M+ +G +P S Y+ L+ C
Sbjct: 706 GYCKSGDLAEAFRLFDE-MK--LKGLVPDSFVYTTLVDGCC 743
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 222/491 (45%), Gaps = 31/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + ++I G R + + + + + N+ S + +++ + D+D A
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M+ASG + + Y L+K +R GD ++L MK +G+ P+ YN+LI L
Sbjct: 440 V-KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ ARS + +M E PN T+ I Y + +A +++ G +P+ V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C G+V++A C + M +G L + TY +L+
Sbjct: 559 LCTGLINEYCKKGKVIEA-------------------CSAYRSMVDQGILGDAKTYTVLM 599
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + +D A ++F +M+ GI+ + +Y LI G G + I M +EG
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM--VEEG 657
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN +L G R + ++A E L +M + L P AV I G+C G++ +A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R FD+M +G VP+ +Y L+ C+ V A + G + FN +++ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWV 776
Query: 422 CRQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+ G +++ M G R P Y+ +I LC++G ++A L QM +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 481 LPDYLTWNSLL 491
+P +T+ SLL
Sbjct: 837 MPTVITYTSLL 847
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 193/429 (44%), Gaps = 30/429 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M+ G+ YTY +L+ GLC R+ D LL M S GV ++ Y+ LI L K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A+ L+ +M + IC KE + A L + + G +P
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++E C R V+ G L EM+++ + + TY ++
Sbjct: 385 YASLIEGYC-------------------REKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C +G LD A ++ +M G N V Y TLI+ R D +++L+ M++ +G
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE--QGI 483
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YNS++ GL + + DEA +L +M + L P A I G+ A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E G +PN V+ LI+ YC++ +V EA + M G L A T+ +++GL
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ V A ++ E MR G+G P Y LI + G Q AS + +MV +G+ P
Sbjct: 604 KNDKVDDAEEIFRE-MR--GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 483 DYLTWNSLL 491
+ + +N LL
Sbjct: 661 NVIIYNMLL 669
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 227/507 (44%), Gaps = 33/507 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ I+ T+I+ + D ++ + + P + +NS++ L K + +D AR+F
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ +G++ + +TY + G + K + M+ GV PN V+ LI+ C
Sbjct: 510 LVE-MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GKV A S M + + T+++L+ K + + +A + + G PDV
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ +G + A I +E E+G R G+++ L EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG PN TY +I YC++G L A +F++MK+ G+ + Y TL+ G C R+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RL 745
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLF-----PRA 341
+D + + + +K+G +P+N+++ +++ + + E L + M+ F P
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ I C +GN+E AK F QM +P V+ Y L++ Y + R E + E
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRGIGRGSLPGSGHYSPLIKAL 459
G P ++ +++ ++G AL LV++ + G L+
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLT 486
+ G + A ++ MV +PD T
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 156/374 (41%), Gaps = 51/374 (13%)
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
V F IL Y +E + A+ + S VP + +L+ L
Sbjct: 152 VLFGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALL-------------- 197
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL--------------- 252
R ++ K M + + +V TY++LI ++C G +
Sbjct: 198 -----RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR 252
Query: 253 ------DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
D AL + M G+ TYD LI GLC R++D +L M+ G
Sbjct: 253 TATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSL--GVSL 310
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y+ ++ GL + D A + +M + P D + ++ +G +E AK
Sbjct: 311 DNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS--KEGVMEKAKA 368
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD MI G +P Y LI YC+E+ VR+ EL+ EM + T+ TV+ G+C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G++ A +V+E I G P Y+ LIK + F A +L +M +GI P
Sbjct: 429 SSGDLDGAYNIVKE---MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 483 DYLTWNSLLICLSQ 496
D +NSL+I LS+
Sbjct: 486 DIFCYNSLIIGLSK 499
>gi|414871052|tpg|DAA49609.1| TPA: hypothetical protein ZEAMMB73_878928 [Zea mays]
Length = 807
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 239/499 (47%), Gaps = 42/499 (8%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD 81
RA+M +D + ++ NM S+ ++S+L L K D+ LA K+M + G+ D
Sbjct: 158 ARAQMNHDALYVLSKMNSLNMQISITTYDSLLYSLRKADVALA---IFKEMESCGIPPSD 214
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
Y++ IL+ GLC ++G+ L + G KP + +NTL+ +LC G + A+S+
Sbjct: 215 YSHGILIDGLCKQGKIGEALSFLQETRKEGKFKPLGMTFNTLMSALCNWGFIQDAKSVFC 274
Query: 141 DMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT------------ 184
M + P+ T+S +I CK ++ A + + G D+VT
Sbjct: 275 LMLKYGLNPSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHG 334
Query: 185 ----ITKVLELLCSVGRVMDAV--EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
I K++E++ +G D V IL +G G V+ G R K++ +G N+ T
Sbjct: 335 HTREIPKMIEMMRGLGVEPDVVTYTILITGHCEG--GDVEEGMRIRKDILGQGIELNIVT 392
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y++LI++ + G+ ++F ++ G+ + + Y LI G C G I L++ LM
Sbjct: 393 YSVLINALFKKGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRALQVWNLMC 452
Query: 299 DSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFC 352
S+ R+ P + S+L GL ++ DEA YL+ + + + V ++ I G+
Sbjct: 453 CSQ-----RVIPTSVNHVSILLGLCKKGFLDEARSYLETVASKYQPSDVVLYNVVIDGYA 507
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G++ +A + +D +I G P +V + L++ YC+ + A + LP
Sbjct: 508 KVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLSDLLPTTV 567
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+ T++ L G V + L + +E G+G P + YS +IK LC++ F A +L
Sbjct: 568 TYTTLMDALSEAGKVHSMLSIFKE---MTGKGIRPNAITYSVVIKGLCKQLMFHDAKNVL 624
Query: 473 VQMVGKGILPDYLTWNSLL 491
M +G D + +N+L+
Sbjct: 625 DDMYREGFDADPIPYNTLI 643
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 210/483 (43%), Gaps = 39/483 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + T+I GL + +N+ V+ M + NS+++
Sbjct: 283 PSRHTYSTIIHGLCKVGSVNEAFDIFQSVTEEGMELDIVTCNSLINGFRLHGHTREIPKM 342
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M GV+ D TY IL+ G C V +G ++ + +G++ N V Y+ LI++L K
Sbjct: 343 IEMMRGLGVEPDVVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFK 402
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +L ++ E + + +SILI +CK + AL
Sbjct: 403 KGLFYEVENLFGEICSIGLELDVIAYSILIHGFCKLGEIGRAL----------------- 445
Query: 185 ITKVLELLCSVGRVM----DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+V L+C RV+ + V IL ++G L + + +L+ + K +V YN
Sbjct: 446 --QVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDEARS---YLETVASKYQPSDVVLYN 500
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
++I Y + G + +A+ +++ + + G+ VT ++L+ G C G + ++ S
Sbjct: 501 VVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFMAIQLS 560
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
Y +++ L + L K+M + + P A+ S+ I G C
Sbjct: 561 D--LLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKGLCKQLMFH 618
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DAK D M EG + + Y+ LI +C+ + + A + + M G +P T+N ++
Sbjct: 619 DAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPSPVTYNLLV 678
Query: 419 SGLCRQGNVGTA-LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ LC +G V A +KL E R +G+ Y+ LIKA C KG A M + +++
Sbjct: 679 NVLCLKGLVIHAEMKL--ESFR--KQGAELRKFAYTTLIKAQCAKGMPYKAIMWVGKLLD 734
Query: 478 KGI 480
G
Sbjct: 735 AGF 737
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 175/391 (44%), Gaps = 37/391 (9%)
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVN---- 165
R +S++++ L +S + A ++S M N + I I Y ++L+
Sbjct: 141 REWDSSSIVWDALANSYARAQMNHDALYVLSKM---NSLNMQISITTY---DSLLYSLRK 194
Query: 166 ---ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
AL + ++ S G P + +++ LC G++ +A+ L+E+ ++G+
Sbjct: 195 ADVALAIFKEMESCGIPPSDYSHGILIDGLCKQGKIGEALSFLQETRKEGKFK------- 247
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
P T+N L+S+ C G + A VF M G++ + TY T+I GLC
Sbjct: 248 -----------PLGMTFNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLC 296
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PR 340
G +++ I Q + ++EG + I NS++ G E + ++ M L P
Sbjct: 297 KVGSVNEAFDIFQSV--TEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPD 354
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ I G C G+VE+ R ++ +G N+V Y LI+A ++ E L
Sbjct: 355 VVTYTILITGHCEGGDVEEGMRIRKDILGQGIELNIVTYSVLINALFKKGLFYEVENLFG 414
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
E+ G ++ ++ G C+ G +G AL++ ++ + +P S ++ ++ LC
Sbjct: 415 EICSIGLELDVIAYSILIHGFCKLGEIGRALQV--WNLMCCSQRVIPTSVNHVSILLGLC 472
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+KG A L + K D + +N ++
Sbjct: 473 KKGFLDEARSYLETVASKYQPSDVVLYNVVI 503
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 158/380 (41%), Gaps = 56/380 (14%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK-SRGVKPNSVIYNTLIHSLCKNGKVGR 134
G++ D Y+IL+ G C +G ++ ++M S+ V P SV + +++ LCK G +
Sbjct: 420 GLELDVIAYSILIHGFCKLGEIGRALQVWNLMCCSQRVIPTSVNHVSILLGLCKKGFLDE 479
Query: 135 ARSLMSDME---EPNDVT-FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
ARS + + +P+DV ++++I Y K ++ NA+ L + G P +VT +L
Sbjct: 480 ARSYLETVASKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLY 539
Query: 191 LLCSVGRVMDA---------VEILEESGEQGRL-------GKVKGGCRFLKEMERKGCLP 234
C G + A ++L + L GKV KEM KG P
Sbjct: 540 GYCKFGDLHMAESYFMAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRP 599
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N TY+++I C+ + A +V +DM +G + + Y+TLI+G C + +
Sbjct: 600 NAITYSVVIKGLCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVY 659
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD 354
+LM V G + P V +L + C+
Sbjct: 660 ELM----------------VCRG-------------------VMPSPVTYNLLVNVLCLK 684
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G V A+ + ++G Y LI A C + +A + ++ G+ F
Sbjct: 685 GLVIHAEMKLESFRKQGAELRKFAYTTLIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDF 744
Query: 415 NTVLSGLCRQGNVGTALKLV 434
+ ++ LC++ AL L+
Sbjct: 745 SAAINRLCKRQFTREALMLI 764
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 25/296 (8%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
P D ++ VI G + I + V+ D + M P++ NS+L K D+ +A
Sbjct: 492 QPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAE 551
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+++ + S + TY LM L +V + M +G++PN++ Y+ +I
Sbjct: 552 SYFM-AIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSIFKEMTGKGIRPNAITYSVVIKG 610
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK A++++ DM + + + ++ LI +C+ ++ NA + E G +P
Sbjct: 611 LCKQLMFHDAKNVLDDMYREGFDADPIPYNTLIQGFCETQDAKNAFYVYELMVCRGVMPS 670
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VT ++ +LC G V+ A LE +QG E+ + Y
Sbjct: 671 PVTYNLLVNVLCLKGLVIHAEMKLESFRKQG------------AELRKFA-------YTT 711
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
LI + C G+ A+ + G + + I LC + L ++ +M
Sbjct: 712 LIKAQCAKGMPYKAIMWVGKLLDAGFEASIEDFSAAINRLCKRQFTREALMLISIM 767
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/401 (28%), Positives = 192/401 (47%), Gaps = 27/401 (6%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G Q + +YA L+ G+C K L + R KP+ V+YNT+I ++C
Sbjct: 151 FHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMC 210
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V A L S+M + VT++ LI +C L A+ LL + P+V
Sbjct: 211 KYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVY 270
Query: 184 TITKVLELLCSVGRVMDAVEILE--------------ESGEQGRL--GKVKGGCRFLKEM 227
T +++ LC G+V +A +L + G +VK M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P+V TY ILI+ +C+ ++D AL++F +M + VTY +LI GLC GRI
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
++ M D G + Y+S++ GL + D A+ +M +++ P +
Sbjct: 391 SYVWDLIDEMRD--RGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT 448
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ + G C G ++DA+ F ++ +G NV Y+ +I+ +C++ + EA ++ +M +
Sbjct: 449 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDN 508
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
G +P A TF T++ L ++ A KL+ + I RG L
Sbjct: 509 GCIPNAFTFETIIIALFKKDENDKAEKLLRQ---MIARGLL 546
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 211/491 (42%), Gaps = 33/491 (6%)
Query: 35 DLVSRFN------MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D VS+FN TP + FN ILD K ++ G+Q D T IL+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEE 144
C ++ GF +L + RG P++V NTLI LC G+V +A L++ +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
N V+++ LI CK + A+ L K PDVV +++ +C V +A +
Sbjct: 162 LNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGL 221
Query: 205 LEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
E +G +GK+K L EM K PNV TYNIL+ + C+
Sbjct: 222 FSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G + A V M + + +TY TL+ G + + M S G +
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM--SLMGVTPDV 339
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y ++ G + DEAL K+M + + P V S I G C G + D+
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDE 399
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M + G +V+ Y LI C+ + A L +M P TF +L GLC+ G
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ A ++ ++ + +G Y+ +I C++G + A +L +M G +P+ T
Sbjct: 460 LKDAQEVFQDLLT---KGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFT 516
Query: 487 WNSLLICLSQQ 497
+ +++I L ++
Sbjct: 517 FETIIIALFKK 527
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 193/410 (47%), Gaps = 45/410 (10%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ T+I G+ + I D A + + + P + ++N+I+D + K +
Sbjct: 167 YATLINGVCK---IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFS 223
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G+ D TY L+ G C+ ++ + LL+ M + + PN YN L+ +LCK G
Sbjct: 224 EMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283
Query: 131 KVGRARSLMSDM----EEPNDVTFSILICAYC------KEENLVNALVLLEKSFSFGFVP 180
KV A+S+++ M +P+ +T+S L+ Y K +++ NA+ L+ G P
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLM------GVTP 337
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DV T T ++ C V +A+ + KEM +K +P + TY+
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLF-------------------KEMHQKNMVPGIVTYS 378
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI C++G + D+ ++M+ G + +TY +LI GLC G +D + + M+D
Sbjct: 379 SLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ + I + +L GL + + +A E + + + ++ I G C G +E
Sbjct: 439 E--IRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLE 496
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
+A +M + G +PN ++ +I A +++ +A +L+++M G L
Sbjct: 497 EALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 194/415 (46%), Gaps = 29/415 (6%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A GV+ D ++ L+ G C R + LL M ++G +S ++ + C+ G+
Sbjct: 174 AGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFR 233
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
L M E PN V +S I C+ + A +LE+ G P+V T T ++
Sbjct: 234 NVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLI 293
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ LC +G + A + FLK ++ PNV TY ++I YC+
Sbjct: 294 DGLCKIGWMERAFRL------------------FLKLVKSSSYKPNVHTYTVMIGGYCKE 335
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G L A + M G++ N TY TLI G C GG D +++ M+ EG I
Sbjct: 336 GKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMK--LEGFLPNIY 393
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN+++ G ++ + EA + L+ + L V ++ I C G++ A F QM
Sbjct: 394 TYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM 453
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
E+ P++ Y +I YCQ+ ++ ++ +L + G +P T+ ++++G CR G +
Sbjct: 454 AEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKL 513
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ALK+ E R + G LP S Y LI +LC++ + A L M+ K ++P
Sbjct: 514 TSALKVFE---RMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVP 565
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 200/453 (44%), Gaps = 42/453 (9%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M G + Y+ + GLC V F +L M +G+KPN + +LI LCK
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299
Query: 130 GKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA L S +PN T++++I YCKE L A +LL + G P+ T
Sbjct: 300 GWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T ++ C G A E+ + +M+ +G LPN+ TYN +I
Sbjct: 360 YTTLIHGHCKGGSFDRAFEL-------------------MNKMKLEGFLPNIYTYNAIIG 400
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ G + A V G+ + VTY LI C G I L + + M +++
Sbjct: 401 GFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM--AEKSC 458
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK-----LFPRAVDRSLKILGFCVDGNVED 359
I Y +++ +Y + +Q E + L +K L P + I G+C G +
Sbjct: 459 HPDIHTYTTII-AMYCQQRQMEQSQQL--FDKCLSIGLVPTKQTYTSMIAGYCRLGKLTS 515
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + F++M++ G +P+ + Y LI + C+E R+ EA L + M +P T T+
Sbjct: 516 ALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAY 575
Query: 420 GLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
CR+ + A+ ++ D R + L++ L G +AS+ L ++ K
Sbjct: 576 EYCRRDKITIAVSFLDRLDKRQQAHTA-------DALVRKLSTVGNLDAASLFLKNVLDK 628
Query: 479 GILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
D+ T+ S + + + L ++E +S
Sbjct: 629 HYAVDHATYTSFINSCYESNRYALASEISEKIS 661
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 189/443 (42%), Gaps = 61/443 (13%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY- 68
D + V+R R +V +S P++ +++ +D L + + +AF+
Sbjct: 215 DSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGY-VKQAFHV 273
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL-LHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ G++ + YT+ L+ GLC + F+L L ++KS KPN Y +I C
Sbjct: 274 LEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYC 333
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ RA L+ M E PN T++ LI +CK + A L+ K GF+P++
Sbjct: 334 KEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIY 393
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C G++ +A ++L + QG + G + K+M
Sbjct: 394 TYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQM 453
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
K C P++ TY +I+ YC+ ++ + +F+ G+ TY ++I G C G++
Sbjct: 454 AEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKL 513
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
LK+ + M V +G P ++
Sbjct: 514 TSALKVFERM----------------VQHG-------------------CLPDSITYGAL 538
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I C + +E+A+ F+ M+++ VP V L + YC+ +++ A + +
Sbjct: 539 ISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKRQQ 598
Query: 408 LPIASTFNTVLSGLCRQGNVGTA 430
A T + ++ L GN+ A
Sbjct: 599 ---AHTADALVRKLSTVGNLDAA 618
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 142/349 (40%), Gaps = 58/349 (16%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ +F L+ C+E A LL ++ GF D T T V+ C GR + +
Sbjct: 178 RPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTD 237
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ + M G PN+ Y+ I CE G + A V +M
Sbjct: 238 LF-------------------RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMV 278
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKI-LQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G+ N T+ +LI GLC G ++ ++ L+L++ S Y+ N
Sbjct: 279 GKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSS-----------------YKPN 321
Query: 323 QQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
++ I G+C +G + A+ +M+E+G PN Y L
Sbjct: 322 VHTY------------------TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTL 363
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
IH +C+ A ELM +M G+LP T+N ++ G C++G + A K++
Sbjct: 364 IHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR---MATS 420
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G Y+ LI C++G A L QM K PD T+ +++
Sbjct: 421 QGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTII 469
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 7/179 (3%)
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLS-GLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R+REA++++ E+ HG + T N VL GL G A + + R G G P
Sbjct: 123 RLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAG-GVRPDH 181
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL----LLLL 505
+ L+ C +G F+ A LL M +G D T ++ +Q + L
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241
Query: 506 LNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGS-VWLGLRIHDTTHTFIIDRRVEIG 563
++EM + +V+ + + C+ + H V GL+ + THT +ID +IG
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 27/361 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM+ G + D T L+ G C NRV D L+ M G KP+ V YN +I SLCK
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A ++E PN VT++ L+ C +A LL P+V+T +
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+L+ G+V++A E+ E EM R P++ TY+ LI+
Sbjct: 265 ALLDAFVKNGKVLEAKELFE-------------------EMVRMSIDPDIVTYSSLINGL 305
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C +D A +F+ M G + V+Y+TLI G C R++DG+K+ + M S+ G
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVS 363
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
YN+++ G ++ D+A E+ QM+ + P ++ + G C +G +E A F
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M + ++V Y +I C+ +V EA L ++ G P T+ T++SGLC +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 425 G 425
G
Sbjct: 484 G 484
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 38/395 (9%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ G++ + +N +I+ C +V A S++ M EP+ VT L+ +C+
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ +A+ L++K G+ PD+V +++ LC RV DA +
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD------------------- 211
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F KE+ERKG PNV TY L++ C + A + +DM I+ N +TY L+
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EK 336
G K+L+ E +E + I P Y+S++ GL ++ DEA + M +
Sbjct: 272 KNG------KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
V + I GFC VED + F +M + G V N V Y+ LI + Q V +A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
E +M G P T+N +L GLC G + AL ++ EDM+ R Y+ +I
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL-VIFEDMQK--REMDLDIVTYTTVI 442
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +C+ G + A L + KG+ PD +T+ +++
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 202/424 (47%), Gaps = 39/424 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD +++ G R ++D V D + P + +N+I+D L K + ++ A F
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++ G++ + TY L+ GLC ++R D +LL M + + PN + Y+ L+ +
Sbjct: 213 F-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNGKV A+ L +M +P+ VT+S LI C + + A + + S G + DVV
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ C RV D G + +EM ++G + N TYN LI
Sbjct: 332 SYNTLINGFCKAKRVED-------------------GMKLFREMSQRGLVSNTVTYNTLI 372
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + G +D A + F+ M GIS + TY+ L+ GLC G ++ L I + M+ K
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ--KRE 430
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
I Y +V+ G+ + + +EA ++ L P V + + G C G + + +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +M +EG + N DC + + + ++EL+K+M GY P S + SG+
Sbjct: 491 ALYTKMKQEGLMKN----DCTL----SDGDITLSAELIKKMLSCGYAP--SLLKDIKSGV 540
Query: 422 CRQG 425
C++
Sbjct: 541 CKKA 544
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 40/407 (9%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFS 151
++ D L M P+ V +N L+ ++ K K SL ME ND+ TF+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
I+I +C + AL +L K G+ PD VTI ++ C RV DAV ++++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK---- 180
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
M G P++ YN +I S C+T ++ A D F +++ GI N
Sbjct: 181 ---------------MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 225
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA 327
VTY L+ GLC+ R D ++L M K +I+P Y+++L + + EA
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDM------IKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 328 LEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E ++M ++ P V S I G C+ +++A + FD M+ +G + +VV Y+ LI+
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRG 444
+C+ +RV + +L +EM+ G + T+NT++ G + G+V A + + D GI
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS-- 397
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ LC+ G + A ++ M + + D +T+ +++
Sbjct: 398 --PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 320 RENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN-V 376
R+ + ++A++ M K FP VD + ++L V D + +E G+ N +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFN-RLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ +I+ +C +V A ++ +M GY P T ++++G CR+ V A+ LV+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD- 179
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ + G P Y+ +I +LC+ A ++ KGI P+ +T+ +L+ L
Sbjct: 180 --KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 497 QTTW 500
+ W
Sbjct: 238 SSRW 241
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 214/437 (48%), Gaps = 36/437 (8%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +++ C V + + ++MK +G P + N ++ L + ++ A +DM
Sbjct: 159 FDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMY 218
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ N TF+I+I CKE L A L SFG P +VT +++
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQ--------- 269
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
G R G+++G + EM+ KG P++ TYN ++S C G A +V
Sbjct: 270 ---------GYSLR-GRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVL 316
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+MK G+ + V+Y+ LIRG + G ++ M K+G YN++++GL+
Sbjct: 317 REMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEM--VKQGMVPTFYTYNTLIHGLF 374
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
EN+ + A ++++ + + +V ++ I G+C G+ + A D+M+ +G P
Sbjct: 375 MENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQF 434
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE- 436
Y LI+ C+ + REA EL +++ G G P NT++ G C GN+ A L++E
Sbjct: 435 TYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM 494
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
D I P Y+ L++ LC +G F+ A L+ +M +GI PD++++N+L+ S+
Sbjct: 495 DRMNID----PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550
Query: 497 Q-TTWLLLLLLNEMVSF 512
+ T ++ +EM+S
Sbjct: 551 KGDTKHAFIVRDEMLSL 567
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 232/504 (46%), Gaps = 61/504 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
+F ++R + RM+++ ++ L+ P + N IL +L + + I+ A FY
Sbjct: 158 LFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFY-AD 216
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M ++ + YT+ I++ LC ++ L +M+S G+KP V YNTL+ G+
Sbjct: 217 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ AR ++S+M+ S GF PD+ T +L
Sbjct: 277 IEGARMIISEMK-------------------------------SKGFQPDLQTYNPILSW 305
Query: 192 LCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPN 235
+C+ GR A E+L E G + G ++ + EM ++G +P
Sbjct: 306 MCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPT 362
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TYN LI +++A + +++ GI + VTY+ +I G C G D K
Sbjct: 363 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHG---DAKKAFA 419
Query: 296 LMED-SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
L ++ +G K Y S++Y L R N+ EA E +++ + + P V + + G C
Sbjct: 420 LHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 479
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
GN++ A +M P+ V Y+CL+ C E + EA ELM EM G P
Sbjct: 480 ATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 539
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
++NT++SG ++G+ A +V ++M +G P Y+ L+K L + + A LL
Sbjct: 540 SYNTLISGYSKKGDTKHAF-IVRDEMLSLGFN--PTLLTYNALLKGLSKNQDGELAEELL 596
Query: 473 VQMVGKGILPDYLTWNSLLICLSQ 496
+M +GI+P+ ++ S++ +S+
Sbjct: 597 REMKSEGIVPNDSSFCSVIEAMSK 620
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 137/320 (42%), Gaps = 27/320 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +IRG + D + + M P+ +N+++ L E+ A
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++ G+ D TY I++ G C F L M + G+KP Y +LI+ LC+
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCR 445
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K A L + +P+ V + L+ +C N+ A LL++ PD VT
Sbjct: 446 RNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVT 505
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC G+ +A E+ + EM+R+G P+ +YN LIS
Sbjct: 506 YNCLMRGLCGEGKFEEAREL-------------------MGEMKRRGIKPDHISYNTLIS 546
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK-EG 303
Y + G A V ++M G + +TY+ L++GL DG +L+ + K EG
Sbjct: 547 GYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKN---QDGELAEELLREMKSEG 603
Query: 304 SKGRISPYNSVLYGLYRENQ 323
S + SV+ + + +
Sbjct: 604 IVPNDSSFCSVIEAMSKSDN 623
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMI---EEGGVPNVVIYDCLIHAYCQEERVREA 395
P++V + LK + +V D FD+++ + + +++D ++ YCQ V EA
Sbjct: 119 PKSVTQLLKEVVSTRKNSVRD---LFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEA 175
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
E M G+ P T N +LS L R + A + R + ++ ++ +
Sbjct: 176 IECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYT---FNIM 232
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I LC++G + A L M GI P +T+N+L+
Sbjct: 233 INVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLV 268
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 217/482 (45%), Gaps = 65/482 (13%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
R+++ V+ ++++ ++ P ++ +++L LVK LA + M++ G++ D Y
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF-NDMVSVGIRPDVYI 229
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +++ LC + +++ M++ G N V YN LI LCK KV A + D+
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+P+ VT+ L+ CK + L ++++ F P ++ ++E L G++
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+ ++ K + G PN+ YN LI S C+ A +F
Sbjct: 350 EALNLV-------------------KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ N VTY LI C G++D L L M D+ G K + PYNS+
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT--GLKLSVYPYNSL----- 443
Query: 320 RENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
I G C G++ A+ +MI + P VV Y
Sbjct: 444 ----------------------------INGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
L+ YC + ++ +A L EMTG G P TF T+LSGL R G + A+KL E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
+ P Y+ +I+ CE+G A L +M KGI+PD ++ L+ +CL+ Q
Sbjct: 536 WNVK---PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 498 TT 499
+
Sbjct: 593 AS 594
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/593 (24%), Positives = 257/593 (43%), Gaps = 85/593 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + T++ GL + + ++ D + +PS +S+++ L ++E ++L
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
K+++ GV + + Y L+ LC + + L M G++PN V Y+ LI
Sbjct: 355 V-----KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 124 HSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
C+ GK+ A S + +M + + ++ LI +CK ++ A + + +
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P VVT T ++ CS G++ A+ + E +G R G ++ +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
EM PN TYN++I YCE G + A + +M GI + +Y LI GLC
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISP--YNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
G+ + ++ D ++ Y +L+G RE + +EAL ++M + R
Sbjct: 590 TGQASEA----KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ---RG 642
Query: 342 VDRSLKILGFCVDGNVEDAKR-----CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
VD L G +DG+++ R +M + G P+ VIY +I A + +EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---------------------- 434
+ M G +P T+ V++GLC+ G V A L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 435 ---EEDMR-------GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
E DM+ I +G L + Y+ LI+ C +G + AS L+ +M+G G+ PD
Sbjct: 763 TKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 485 LTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
+T+ +++ L ++ N++ + + + ++ K R + N L HG
Sbjct: 823 ITYTTMINELCRR---------NDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 198/468 (42%), Gaps = 74/468 (15%)
Query: 45 SLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
S+ +NS+++ K DI A F +M+ ++ TY LM G C ++ +L
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFM-AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
H M +G+ P+ + TL+ L + G + A L ++M E PN VT++++I YC+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE-------ESGEQG 212
E ++ A L++ G VPD + ++ LC G+ +A ++ E E
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 213 RLGKVKGGCR--------------------------------------------FLKEME 228
G + G CR LKEM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G P+ Y +I + +TG A +++ M +G N VTY +I GLC G ++
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYR------ENQQDEALEYLKQMEK-LFPRA 341
+ + M+ S N V YG + E +A+E + K L
Sbjct: 735 EAEVLCSKMQPVS-------SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
++ I GFC G +E+A +MI +G P+ + Y +I+ C+ V++A EL
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
MT G P +NT++ G C G +G A +L E +R +G +P +
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR---QGLIPNN 892
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 29/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P F T++ GL RA +I D VK + ++ +N+ P+ +N +++ +E D+++AF
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG-DMSKAFE 563
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M G+ D Y+Y L+ GLCLT + + + + + N + Y L+H C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ A S+ +M + + V + +LI K ++ LL++ G PD V
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G +A I + M +GC+PN TY +I
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDL-------------------MINEGCVPNEVTYTAVI 724
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G ++ A + + M+ N VTY + L G D K ++L +G
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV--DMQKAVELHNAILKG 782
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN ++ G R+ + +EA E + +M + + P + + I C +V+ A
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
++ M E+G P+ V Y+ LIH C + +A+EL EM G +P T T S
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 42/289 (14%)
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
+D LI+ R+ DG+ + ++M +K + +++L+GL + A+E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMM-ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + P + I C ++ AK M G N+V Y+ LI C++++
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
V EA + K++ G P T+ T++ GLC+ L++++E + R S P
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML--CLRFS-PSEAA 334
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
S L++ L ++G + A L+ ++V G+ P+ +N+L+ L
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL----------------- 377
Query: 512 FVMVVHELSAKEKRCKLRSLNH---LAHGAGSVWLGLRIHDTTHTFIID 557
CK R + L G + GLR +D T++ +ID
Sbjct: 378 --------------CKGRKFHEAELLFDRMGKI--GLRPNDVTYSILID 410
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 238/503 (47%), Gaps = 61/503 (12%)
Query: 48 IFNSILDVLVKEDIDLARAFYRK--------------------------KMMASGVQGDD 81
+F +ILD+LV D+ A + + KM+ +G+ D
Sbjct: 121 VFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDV 180
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
+++ L N + + +M+ G+KP V YNT++ S CK G+V +A L+S+
Sbjct: 181 KNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSE 240
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M+E PNDVT+++L+ K+ L A L+E+ + G T ++ C G
Sbjct: 241 MQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGL 300
Query: 198 VMDAVEILEESGEQGRLGKVK-------GGCRFLK---------EMERKGCLPNVDTYNI 241
++A +++EE + + G C++++ +M + P++ ++N
Sbjct: 301 FVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNS 360
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ YC TG + A +F+++K + +TY+TLI GLC G +D L++ + M D
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD-- 418
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G I Y ++ G ++ A + +M + L P + +I+G + + D
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIAD 475
Query: 360 AKRCF---DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
F ++M+ G P+V+ Y+ +HA CQ+ EA +L++ M G +P T+ +
Sbjct: 476 TSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++G + G++ A ++ E + +G P Y+ LI A K A M +M+
Sbjct: 536 IINGFVKNGHLRKAREVFNE---MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKML 592
Query: 477 GKGILPDYLTWNSLL--ICLSQQ 497
K + + +T+N+++ +C++++
Sbjct: 593 EKSVPANVITYNAIINGLCMTRR 615
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 194/429 (45%), Gaps = 32/429 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ SG+ YTY L+ G C + F L+ M +R P YNTL++ LCK
Sbjct: 274 EEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW 333
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V R SDM + P+ V+F+ L+ YC+ + A +L ++ VP V+T
Sbjct: 334 VQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITY 393
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ LC G + R KEM +G P++ TY IL++
Sbjct: 394 NTLIHGLC-------------------MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGS 304
+ G + A FN+M G+ + Y+T I G +I D + E+ G
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGF 491
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YN ++ L ++ +EA + L+ M + L P V + I GF +G++ A+
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F++M+ +G P+VV Y LIHA+ ++ + A +M T+N +++GLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ A K +E +G LP Y+ LI C G ++ A L +M+ + I P
Sbjct: 612 MTRRMDEAYKYFDEMEE---KGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668
Query: 483 DYLTWNSLL 491
D T + L
Sbjct: 669 DSFTHSVFL 677
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 47/417 (11%)
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
V L++ +K G +PDV ++L +L ++ L K K
Sbjct: 162 VXCLLVFDKMIRNGLLPDVKNCNRILRVL----------------RDENLLSKAKN---V 202
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
ME+ G P V TYN ++ SYC+ G +D AL++ ++M+ G N VTY+ L+ GL
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G ++ +++ M +S G YN ++ G ++ EA + +++M + FP
Sbjct: 263 KGELEQAKGLIEEMLNS--GLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTL 320
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + G C V + F M++ P++V ++ L++ YC+ + EA L E
Sbjct: 321 STYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDE 380
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
+ +P T+NT++ GLC G + AL+L +E +G P Y+ L+ +
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE---MTDQGLFPDIFTYTILVNGCFK 437
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL----------ICLSQQTTWLLLLLLNEMVS 511
G A +M+ KG+ PD +N+ + + S Q L ++++
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497
Query: 512 FVMVVHELSAK---EKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
+ + VH L + E+ C L V GL T+T II+ V+ GH+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLE--------NMVSDGLIPDHVTYTSIINGFVKNGHL 546
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 28/367 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +++ G R I++ D + ++ P++ +N+++ L A
Sbjct: 353 PDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL 412
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K+M G+ D +TY IL+ G V + M S+G+KP+ YNT I K
Sbjct: 413 KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMK 472
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A S+ +M P+ +T+++ + A C++ N A LLE S G +PD VT
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T ++ G + A E+ EM KG P+V TY +LI
Sbjct: 533 YTSIINGFVKNGHLRKAREVF-------------------NEMLSKGVAPSVVTYTVLIH 573
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
++ +LD A F+ M + N +TY+ +I GLC R+D+ K ME+ +G
Sbjct: 574 AHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE--KGI 631
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y ++ +EAL ++M K+ P + S+ + D V A +
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQ 690
Query: 363 CFDQMIE 369
C + +I+
Sbjct: 691 CVESLIQ 697
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 183/367 (49%), Gaps = 27/367 (7%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV +DYT IL+ LC + + +L M G++P+SV + TLI+ LC G++ A
Sbjct: 116 GVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEA 175
Query: 136 RSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L ++M PN VTF+IL+ CK+ + A + E G P++ T ++
Sbjct: 176 VELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNG 235
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C + DA ++ E M KGC P+V +Y+ILI+ YC++
Sbjct: 236 YCLRLEMNDASKVFE-------------------IMVGKGCAPSVHSYSILINGYCKSRR 276
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+D A + M + N VTY+TL++GLC + + ++ + M S G + Y
Sbjct: 277 IDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSS--GMLPNLRTY 334
Query: 312 NSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+ +L GL + +EAL+ L M+ KL P V ++ I G + G +E AK F ++
Sbjct: 335 SILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFA 394
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+V Y+ +I +E EA +L ++M G+LP + ++N ++ G + + T
Sbjct: 395 NGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPST 454
Query: 430 ALKLVEE 436
A++L++E
Sbjct: 455 AIQLIDE 461
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 189/421 (44%), Gaps = 31/421 (7%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
+ D + M +P+ V + S+ K + SL + M+ ND T +I
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI + C+ ++ A+ +L K F G PD VT T ++ LC+ GR+ +AVE+
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELF------- 179
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
EM + +PN T+ IL+ C+ G++ A VF M G+ N
Sbjct: 180 ------------NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIY 227
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY+ L+ G C ++D K+ ++M +G + Y+ ++ G + + DEA L
Sbjct: 228 TYNALMNGYCLRLEMNDASKVFEIM--VGKGCAPSVHSYSILINGYCKSRRIDEAKALLT 285
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
QM ++L P V + + G C ++ +A+ F +M G +PN+ Y L+ C+
Sbjct: 286 QMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHG 345
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EA +L+ M P +N ++ G+ G + A +L + G P
Sbjct: 346 HLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFS---KLFANGIRPSVR 402
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEM 509
Y+ +IK L ++G A L +M G LPD ++N ++ L Q + L++EM
Sbjct: 403 TYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462
Query: 510 V 510
V
Sbjct: 463 V 463
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 164/357 (45%), Gaps = 33/357 (9%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM G+Q D T+ L+ GLC R+ + +L + M R PN+V + L+ LCK G
Sbjct: 146 KMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKG 205
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V AR + M EPN T++ L+ YC + +A + E G P V + +
Sbjct: 206 MVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYS 265
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C R+ +A + L +M K +PN TYN L+
Sbjct: 266 ILINGYCKSRRIDEAKAL-------------------LTQMSEKELIPNTVTYNTLMQGL 306
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C L A ++F M G+ N TY L+ GLC G +++ LK+L M++ K +
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK--LEP 364
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK-----ILGFCVDGNVEDAK 361
I YN ++ G++ + + A E KLF + S++ I G +G ++A
Sbjct: 365 DIVLYNILIQGMFIAGKLEVAKELF---SKLFANGIRPSVRTYNIMIKGLLKEGLSDEAY 421
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+ F +M ++G +P+ Y+ +I + Q + A +L+ EM G + +STF +L
Sbjct: 422 KLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 27/331 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F T+I GL I + V+ + ++ + P+ F ++DVL K+ + AR
Sbjct: 154 PDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCV 213
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M GV+ + YTY LM G CL + D K+ +M +G P+ Y+ LI+ C
Sbjct: 214 F-ETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYC 272
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ ++ A++L++ M E PN VT++ L+ C +L+ A L +K S G +P++
Sbjct: 273 KSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLR 332
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +L+ LC G + +A+ + L M+ + P++ YNILI
Sbjct: 333 TYSILLDGLCKHGHLEEAL-------------------KLLTSMQERKLEPDIVLYNILI 373
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
G L+ A ++F+ + +GI + TY+ +I+GL G D+ K+ + MED +G
Sbjct: 374 QGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMED--DG 431
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
YN ++ G + A++ + +M
Sbjct: 432 FLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D ++DA F +MI P+ V + + ++++ L +M G T
Sbjct: 64 DIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYT 123
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
N +++ LCR ++ A+ ++ + + G P S ++ LI LC +G + A L
Sbjct: 124 LNILINSLCRLSHIHFAVSVLSKMFK---LGIQPDSVTFTTLINGLCNEGRIKEAVELFN 180
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ 497
+M G+ +P+ +T+ L+ L ++
Sbjct: 181 EMAGRDAMPNTVTFTILVDVLCKK 204
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 238/503 (47%), Gaps = 61/503 (12%)
Query: 48 IFNSILDVLVKEDIDLARAFYRK--------------------------KMMASGVQGDD 81
+F +ILD+LV D+ A + + KM+ +G+ D
Sbjct: 121 VFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDV 180
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
+++ L N + + +M+ G+KP V YNT++ S CK G+V +A L+S+
Sbjct: 181 KNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSE 240
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M+E PNDVT+++L+ K+ L A L+E+ + G T ++ C G
Sbjct: 241 MQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGL 300
Query: 198 VMDAVEILEESGEQGRLGKVK-------GGCRFLK---------EMERKGCLPNVDTYNI 241
++A +++EE + + G C++++ +M + P++ ++N
Sbjct: 301 FVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNS 360
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
L+ YC TG + A +F+++K + +TY+TLI GLC G +D L++ + M D
Sbjct: 361 LLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD-- 418
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G I Y ++ G ++ A + +M + L P + +I+G + + D
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIAD 475
Query: 360 AKRCF---DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
F ++M+ G P+V+ Y+ +HA CQ+ EA +L++ M G +P T+ +
Sbjct: 476 TSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTS 535
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++G + G++ A ++ E + +G P Y+ LI A K A M +M+
Sbjct: 536 IINGFVKNGHLRKAREVFNE---MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKML 592
Query: 477 GKGILPDYLTWNSLL--ICLSQQ 497
K + + +T+N+++ +C++++
Sbjct: 593 EKSVPANVITYNAIINGLCMTRR 615
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 194/429 (45%), Gaps = 32/429 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ SG+ YTY L+ G C + F L+ M +R P YNTL++ LCK
Sbjct: 274 EEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW 333
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V R SDM + P+ V+F+ L+ YC+ + A +L ++ VP V+T
Sbjct: 334 VQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITY 393
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ LC G + R KEM +G P++ TY IL++
Sbjct: 394 NTLIHGLC-------------------MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNG 434
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGS 304
+ G + A FN+M G+ + Y+T I G +I D + E+ G
Sbjct: 435 CFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG---EMKIADTSVAFSMQEEMLAAGF 491
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YN ++ L ++ +EA + L+ M + L P V + I GF +G++ A+
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F++M+ +G P+VV Y LIHA+ ++ + A +M T+N +++GLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ A K +E +G LP Y+ LI C G ++ A L +M+ + I P
Sbjct: 612 MTRRMDEAYKYFDEMEE---KGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668
Query: 483 DYLTWNSLL 491
D T + L
Sbjct: 669 DSFTHSVFL 677
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/417 (25%), Positives = 185/417 (44%), Gaps = 47/417 (11%)
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
V L++ +K G +PDV ++L +L ++ L K K
Sbjct: 162 VXCLLVFDKMIRNGLLPDVKNCNRILRVL----------------RDENLLSKAKN---V 202
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
ME+ G P V TYN ++ SYC+ G +D AL++ ++M+ G N VTY+ L+ GL
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G ++ +++ M +S G YN ++ G ++ EA + +++M + FP
Sbjct: 263 KGELEQAKGLIEEMLNS--GLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTL 320
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + G C V + F M++ P++V ++ L++ YC+ + EA L E
Sbjct: 321 STYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDE 380
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
+ +P T+NT++ GLC G + AL+L +E +G P Y+ L+ +
Sbjct: 381 LKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKE---MTDQGLFPDIFTYTILVNGCFK 437
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL----------ICLSQQTTWLLLLLLNEMVS 511
G A +M+ KG+ PD +N+ + + S Q L ++++
Sbjct: 438 LGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVIT 497
Query: 512 FVMVVHELSAK---EKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
+ + VH L + E+ C L V GL T+T II+ V+ GH+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLE--------NMVSDGLIPDHVTYTSIINGFVKNGHL 546
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 28/367 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +++ G R I++ D + ++ P++ +N+++ L A
Sbjct: 353 PDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRL 412
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K+M G+ D +TY IL+ G V + M S+G+KP+ YNT I K
Sbjct: 413 KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMK 472
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A S+ +M P+ +T+++ + A C++ N A LLE S G +PD VT
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T ++ G + A E+ EM KG P+V TY +LI
Sbjct: 533 YTSIINGFVKNGHLRKAREVF-------------------NEMLSKGVAPSVVTYTVLIH 573
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
++ +LD A F+ M + N +TY+ +I GLC R+D+ K ME+ +G
Sbjct: 574 AHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEE--KGI 631
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y ++ +EAL ++M K+ P + S+ + D V A +
Sbjct: 632 LPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQ 690
Query: 363 CFDQMIE 369
C + +I+
Sbjct: 691 CVESLIQ 697
>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 889
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 32/459 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ + + Y I++ C+ R D ++M RG P V +NT+I++ CK G V AR
Sbjct: 298 EPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARK 357
Query: 138 LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
L ++E PN + ++ L+ Y K + A +L E+ G PD +T ++
Sbjct: 358 LFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHY 417
Query: 194 SVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVD 237
GR D +L++ G L G++ FL +M KG P++
Sbjct: 418 KYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSII 477
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QL 296
+N +I++Y + G+ D A + + M G++ + T +L+ GL GR+ + +++ Q+
Sbjct: 478 AFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQM 537
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+E +G + +L ++ A +ME+ +FP V S I G
Sbjct: 538 IE---KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQ 594
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G VE+A F +M+ +G +PN Y+ LI +C+ ++ EA +L K M G LP T
Sbjct: 595 GLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTT 654
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ GLC+QG + +A+ V DM G P Y+ LI C+ +A L+ +
Sbjct: 655 NMIIGGLCKQGRMRSAIN-VFMDMHQTGLS--PDIITYNTLINGYCKAFDMVNADNLVNR 711
Query: 475 MVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVS 511
M G PD T+N + C S++ +L+L+E+VS
Sbjct: 712 MYASGSNPDLTTYNIRIHGFCSSRRMN-RAVLMLDELVS 749
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 210/444 (47%), Gaps = 27/444 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K ++ G Q YT++ ++ G C + G LLH+M +PN+ YN +I++ C
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A + + M E P VTF+ +I A+CKE N+V A L + GF P+ +
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
++ + + A + EE ++G + G+ + G R LK++
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G LP+ ++I +S C G LD A++ DM G+S + + ++++I G D
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL 349
+ +LM G S +S+L GL + EA E + QM + + + +L
Sbjct: 495 AFEAYKLM--VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552
Query: 350 --GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
F G+V A+ + +M G P+VV + I ++ V EA + EM G
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P +N+++ G C+ G + ALKL E+ MR RG LP + +I LC++G +S
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKL-EKVMR--HRGLLPDIFTTNMIIGGLCKQGRMRS 669
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A + + M G+ PD +T+N+L+
Sbjct: 670 AINVFMDMHQTGLSPDIITYNTLI 693
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 31/473 (6%)
Query: 51 SILDVLVKEDIDLARAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
S+LD L++ ++ F +M GV+ AIL K L G+ +KL
Sbjct: 197 SVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKD 256
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEEN 162
+ RG +P ++ +I C+ G + SL+ M EPN ++I+I A C
Sbjct: 257 VIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGR 316
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------- 212
+AL G P VVT V+ C G V++A ++ + E G
Sbjct: 317 TSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNT 376
Query: 213 ------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
++ ++ +EM +KG P+ T+NIL+S + + G + + D+ + G
Sbjct: 377 LMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLG 436
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + +D + GLC GR+D+ ++ LM+ ++G I +NSV+ + +D+
Sbjct: 437 LLPDRSLFDISVSGLCWAGRLDEAMEF--LMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A E K M L P S ++G ++G +++A QMIE+G N + + L+
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+ + V A L EM G P F+ + GL +QG V A + E +R +G
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR---KG 611
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+P + Y+ LI C+ G A L M +G+LPD T N ++ L +Q
Sbjct: 612 LIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQ 664
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 204/437 (46%), Gaps = 26/437 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P F TVI + + + K D + +P+ ++N++++ VK +ID A
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++M G+ D T+ IL+ G R DG +LL + G+ P+ +++ + LC
Sbjct: 394 Y-EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 452
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A + DM E P+ + F+ +I AY + A + FG P
Sbjct: 453 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 512
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + +L L GR+ +A E++ + E+G + G V G EM
Sbjct: 513 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 572
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
ER+G P+V ++ I + G+++ A +VF +M G+ N Y++LI G C G++
Sbjct: 573 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 632
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++ LK+ ++M G I N ++ GL ++ + A+ M + L P + +
Sbjct: 633 NEALKLEKVMR--HRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 690
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+C ++ +A ++M G P++ Y+ IH +C R+ A ++ E+
Sbjct: 691 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 750
Query: 406 GYLPIASTFNTVLSGLC 422
G +P T+N++L+G+C
Sbjct: 751 GIVPNTVTYNSMLNGVC 767
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 136/300 (45%), Gaps = 30/300 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
P F +VI +A + + +A L+ F +TPS +S+L L ++E +L
Sbjct: 474 PSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 533
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M+ G+ ++ + +L+ V L M+ RG+ P+ V ++ I
Sbjct: 534 I-----GQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 588
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
L K G V A ++ +M PN+ ++ LIC +CK L AL L + G +
Sbjct: 589 DGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLL 648
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------F 223
PD+ T ++ LC GR+ A+ + + + G + G C+
Sbjct: 649 PDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNL 708
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ M G P++ TYNI I +C + ++ A+ + +++ GI N VTY++++ G+CS
Sbjct: 709 VNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCS 768
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 22/250 (8%)
Query: 29 DVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
DVV A L + R + P + F++ +D L K+ + +M+ G+ +++ Y
Sbjct: 561 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYN 620
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
L+ G C ++ + KL VM+ RG+ P+ N +I LCK G++ A ++ DM +
Sbjct: 621 SLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQT 680
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ +T++ LI YCK ++VNA L+ + ++ G PD+ T + CS R+ A
Sbjct: 681 GLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRA 740
Query: 202 VEILEESGEQGRLGK-------VKGGCR--------FLKEMERKGCLPNVDTYNILISSY 246
V +L+E G + + G C + + +PNV T N+L+S +
Sbjct: 741 VLMLDELVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLLLSQF 800
Query: 247 CETGVLDSAL 256
+ G+ + L
Sbjct: 801 YKQGMPERTL 810
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 9 PDESIFIT--VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PD IF T +I GL + + + + + ++P + +N++++ K D+ A
Sbjct: 649 PD--IFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKA-FDMVNA 705
Query: 67 -FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+M ASG D TY I + G C + R+ +L + S G+ PN+V YN++++
Sbjct: 706 DNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNG 765
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
+C + + RA L + + + PN VT ++L+ + K+
Sbjct: 766 VCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQ 803
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 209/463 (45%), Gaps = 36/463 (7%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
++P + +NS++D K A +M G D TY L+ C ++ F
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 320
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+ MK+ G+KPN V Y+TLI + CK G + A L+ DM PN+ T++ LI A
Sbjct: 321 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDAN 380
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK NL A LL G ++VT T +L+ LC GR+++A E+
Sbjct: 381 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF------------ 428
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M + G PN Y L+ Y + ++ A+ + M I + + Y ++
Sbjct: 429 -------RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 481
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G CS ++++ IL+ M+ + IS +++ ++ + +AL + ++M+ +
Sbjct: 482 IWGHCSQRKLEETKLILEEMKSRGISANPVIS--TTIIDAYFKAGKSSDALNFFQEMQDV 539
Query: 338 FPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
A V + I G C G VE A F +M+ G PNV +Y LI C + A
Sbjct: 540 GVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESA 599
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSP 454
+L EM G P + F ++ G + GN+ AL L+ + ++ H Y+
Sbjct: 600 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISR----MTELAIEFDLHVYTS 655
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ + G A +M+ KGILP+ + L ICL ++
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEV----LCICLLRE 694
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 184/389 (47%), Gaps = 26/389 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P++ +++++D KE + M +G+ +++TY L+ C + + +
Sbjct: 331 LKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 390
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAY 157
KLL+ M GVK N V Y L+ LCK G++ A RS++ D PN ++ L+ Y
Sbjct: 391 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 450
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
K E + +A+ +L++ PD++ ++ CS ++ + ILEE +G
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ GK F +EM+ G + TY +LI CE G+++ A+D F
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCR 570
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G+ N Y +LI GLC I+ K+ M+ G I+ + +++ G +
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQ--CRGMTPDITAFTALIDGNLKH 628
Query: 322 NQQDEALEYLKQMEKL---FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
EAL + +M +L F V SL + GF G + A++ F++MIE+G +P V+
Sbjct: 629 GNLQEALVLISRMTELAIEFDLHVYTSL-VSGFSQCGELHQARKFFNEMIEKGILPEEVL 687
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGY 407
CL+ Y + ++ EA EL EM Y
Sbjct: 688 CICLLREYYKRGQLDEAIELKNEMERMAY 716
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 221/521 (42%), Gaps = 83/521 (15%)
Query: 14 FITVIRGLGRARMI---NDVVKATDLVSRFNM-TPSLKIFNSILDVLVKEDIDLARAFYR 69
+ ++ + RARM +D VK + SR +M P IF+ +
Sbjct: 107 YCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWST-------------- 152
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ + SG D +++ ++ L L + F M++ P + N L+H L K+
Sbjct: 153 RNICVSGSGVFDVLFSVFVE-LGLLEEANECFSR---MRNFRTLPKARSCNFLLHRLSKS 208
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G R +DM P+ T++++I CKE +L N+ L + G PDVVT
Sbjct: 209 GNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTY 268
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ G++G ++ EM+ GC+P++ TYN LI+
Sbjct: 269 NSLID-------------------GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 309
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC+ + A + F++MK +G+ N VTY TLI C G + +K+L M + G
Sbjct: 310 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMR--RTGLL 367
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSLKILGFCVDGNVEDAKRC 363
Y S++ + EA + L M + + V + + G C G + +A+
Sbjct: 368 PNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEV 427
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F M+++G PN +Y L+H Y + ER+ +A +++K+MT P + +++ G C
Sbjct: 428 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCS 487
Query: 424 QGNVGTALKLVEEDMRGIGRGSLP-----------GSGH--------------------- 451
Q + KL+ E+M+ G + P +G
Sbjct: 488 QRKLEET-KLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 546
Query: 452 -YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y LI LCE G + A +M+ G+ P+ + SL+
Sbjct: 547 TYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 122/302 (40%), Gaps = 58/302 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-----------DVLV 57
P++ ++ ++ G +A + D +K ++ N+ P L ++ SI+ L+
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 497
Query: 58 KEDID-------------LARAFYR-----------KKMMASGVQGDDYTYAILMKGLCL 93
E++ + A+++ ++M GV+ TY +L+ GLC
Sbjct: 498 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCE 557
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
V M S G++PN +Y +LI LC N + A+ L +M+ P+
Sbjct: 558 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITA 617
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ LI K NL ALVL+ + D+ T ++ G +
Sbjct: 618 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL----------- 666
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
Q R +F EM KG LP L+ Y + G LD A+++ N+M+ S+
Sbjct: 667 HQAR--------KFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSF 718
Query: 270 NF 271
F
Sbjct: 719 EF 720
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +E+A CF +M +P + L+H + + + +M G G P T+
Sbjct: 174 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 233
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ LC++G++ + +L + MR +G P Y+ LI + G + + L +
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQ-MREMGLS--PDVVTYNSLIDGYGKVGSLEEVASLFNE 290
Query: 475 MVGKGILPDYLTWNSLLIC 493
M G +PD +T+N L+ C
Sbjct: 291 MKDVGCVPDIITYNGLINC 309
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 219/491 (44%), Gaps = 29/491 (5%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDD-YTYAI 86
DV A L+ P +N ++ V D+D+A A R+ + G D ++Y +
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNV 199
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG---RAR-SLMSDM 142
++ GL + + D K+ M GV PN + YNT+I K G + R R ++ D
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+PN VT+++L+ C+ + VL+++ S PD T + + + L G +
Sbjct: 260 PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 319
Query: 203 EILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+ ES ++G + GKV + L+ + G +P YN LI+ Y
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 379
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ L A +F MK I + +TY+ LI GLC + ++ ME K G
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME--KSGVDP 437
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ +N+++ Q ++ L M++ + + + FC +G + +A
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D MI + PN +Y+ +I AY + +A L+++M G T+N +L GLCR
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 557
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A +L+ +R +G P Y+ +I A C KG A LL +M GI P
Sbjct: 558 SQIDEAEELIYT-LR--NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 614
Query: 485 LTWNSLLICLS 495
T+++L+ L+
Sbjct: 615 RTYHTLVSALA 625
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 226/518 (43%), Gaps = 67/518 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + VI GL R+ +D +K D + + P+ +N+++D VK DL F
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGG-DLEAGF 249
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
R +M+ G + + TY +L+ GLC R+ + L+ M S + P+ Y+ L
Sbjct: 250 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 309
Query: 123 -------------------------------IHSLCKNGKVGRARSLMSDMEE----PND 147
++ LCK+GKV +A ++ + P
Sbjct: 310 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 369
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
V ++ LI YC+ +L A + E+ S PD +T ++ LC + V A +++
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV-- 427
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
EME+ G P+V+T+N LI +Y G L+ V +DM+ GI
Sbjct: 428 -----------------MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ +++ ++++ C G+I + + IL M ++ YNS++ ++A
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV--YNSIIDAYIESGDTEQA 528
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+++M+ + V +L + G C +++A+ + +G P+VV Y+ +I A
Sbjct: 529 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C + +A EL++EM +G P T++T++S L G V L ++ + +
Sbjct: 589 CCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLH---KNV 645
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
P S Y ++ A + L +M KGI D
Sbjct: 646 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 5/261 (1%)
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP++ + N+L+ S G F + G + ++ +++ + G +D L
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILG 350
+++ M S+ YN V+ GL+R + +AL+ +M + P + + I G
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
G++E R DQM+ +G PN+V Y+ L+ C+ R+ E LM EM H P
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T++ + GL R G T L L E ++ +G + G+ S L+ LC+ G A
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLK---KGVMLGAYTCSILLNGLCKDGKVAKAEQ 355
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+L +V G++P + +N+L+
Sbjct: 356 VLEMLVHTGLVPTTVIYNTLI 376
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 172/361 (47%), Gaps = 27/361 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM+ G + D T L+ G C NRV D L+ M G KP+ V YN +I SLCK
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A ++E PN VT++ L+ C +A LL P+V+T +
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+L+ G+V++A E+ E EM R P++ TY+ L++
Sbjct: 265 ALLDAFVKNGKVLEAKELFE-------------------EMVRMSIDPDIVTYSSLVNGL 305
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C +D A +F+ M G + V+Y+TLI G C R++DG+K+ + M S+ G
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVS 363
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
YN+++ G ++ D+A E+ QM+ + P ++ + G C +G +E A F
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M + ++V Y +I C+ +V EA L ++ G P T+ T++SGLC +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 425 G 425
G
Sbjct: 484 G 484
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 38/395 (9%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ G++ + +N +I+ C +V A S++ M EP+ VT L+ +C+
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ +A+ L++K G+ PD+V +++ LC RV DA +
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD------------------- 211
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F KE+ERKG PNV TY L++ C + A + +DM I+ N +TY L+
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EK 336
G K+L+ E +E + I P Y+S++ GL ++ DEA + M +
Sbjct: 272 KNG------KVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG 325
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
V + I GFC VED + F +M + G V N V Y+ LI + Q V +A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
E +M G P T+N +L GLC G + AL ++ EDM+ R Y+ +I
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL-VIFEDMQK--REMDLDIVTYTTVI 442
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +C+ G + A L + KG+ PD +T+ +++
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 202/424 (47%), Gaps = 39/424 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD +++ G R ++D V D + P + +N+I+D L K + ++ A F
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++ G++ + TY L+ GLC ++R D +LL M + + PN + Y+ L+ +
Sbjct: 213 F-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNGKV A+ L +M +P+ VT+S L+ C + + A + + S G + DVV
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ C RV D G + +EM ++G + N TYN LI
Sbjct: 332 SYNTLINGFCKAKRVED-------------------GMKLFREMSQRGLVSNTVTYNTLI 372
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + G +D A + F+ M GIS + TY+ L+ GLC G ++ L I + M+ K
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ--KRE 430
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
I Y +V+ G+ + + +EA ++ L P V + + G C G + + +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +M +EG + N DC + + + ++EL+K+M GY P S + SG+
Sbjct: 491 ALYTKMKQEGLMKN----DCTL----SDGDITLSAELIKKMLSCGYAP--SLLKDIKSGV 540
Query: 422 CRQG 425
C++
Sbjct: 541 CKKA 544
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 197/407 (48%), Gaps = 40/407 (9%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFS 151
++ D L M P+ V +N L+ ++ K K SL ME ND+ TF+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
I+I +C + AL +L K G+ PD VTI ++ C RV DAV ++++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK---- 180
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
M G P++ YN +I S C+T ++ A D F +++ GI N
Sbjct: 181 ---------------MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 225
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA 327
VTY L+ GLC+ R D ++L M K +I+P Y+++L + + EA
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDM------IKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 328 LEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E ++M ++ P V S + G C+ +++A + FD M+ +G + +VV Y+ LI+
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRG 444
+C+ +RV + +L +EM+ G + T+NT++ G + G+V A + + D GI
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS-- 397
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ LC+ G + A ++ M + + D +T+ +++
Sbjct: 398 --PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 320 RENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN-V 376
R+ + ++A++ M K FP VD + ++L V D + +E G+ N +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFN-RLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ +I+ +C +V A ++ +M GY P T ++++G CR+ V A+ LV+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD- 179
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ + G P Y+ +I +LC+ A ++ KGI P+ +T+ +L+ L
Sbjct: 180 --KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 497 QTTW 500
+ W
Sbjct: 238 SSRW 241
>gi|255574125|ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532604|gb|EEF34390.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 227/491 (46%), Gaps = 43/491 (8%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMAS---GVQGD--DYTYA---ILMKGLCLTNRVGD 99
+FN +LD ++K ++ ++ ++S G+ G D +YA L++ LCL ++G
Sbjct: 85 VFN-VLDAMLKGSLERLKSMRESIGISSVKVGLAGRSVDVSYAGHASLVRDLCLAGKLGA 143
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
L + +G P+ + +N L++ LC +G + +A L+ +M E PN TF+ I
Sbjct: 144 ALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATFNTFIK 203
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE---SGEQG 212
YC N+ AL L G P+ VT+ ++ LC G + DA ++L E E+
Sbjct: 204 GYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGELLDDNEKA 263
Query: 213 RL----------GKVKGG-----CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
R+ G +K G M + L + YN+LI +C T + A
Sbjct: 264 RVNLITSTILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYS 323
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
DM G+ + TY+TLI GLC G++ + I +M + G Y V+ G
Sbjct: 324 YSCDMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVML--RMGVAPDQISYKIVIQG 381
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L +A E+L M + + P A +L I GF G+ +A DQM+ G VPN
Sbjct: 382 LCTRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPN 441
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V Y+ LIHA + + +A L K M HG P T+N ++ C G + A++L
Sbjct: 442 VFTYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYY 501
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
E +R G P Y+ LI+ LC +G + A L ++ G+ D++ + L+
Sbjct: 502 EMLRS---GHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPFQLLI---- 554
Query: 496 QQTTWLLLLLL 506
+ T+ LLL L
Sbjct: 555 -KNTFNLLLTL 564
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 24/252 (9%)
Query: 33 ATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+ D++ R + P + +N+++ L K + M+ GV D +Y I+++GLC
Sbjct: 325 SCDMLKR-GLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLC 383
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
V + LH M + + P + ++N +I + G A S+ M PN
Sbjct: 384 TRGDVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVF 443
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ LI A K N+V+A L + G PDV+T ++ C+ GR+ AV++
Sbjct: 444 TYNALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYY-- 501
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
EM R G P++ TY LI C G + A ++F ++ G++
Sbjct: 502 -----------------EMLRSGHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLT 544
Query: 269 WNFVTYDTLIRG 280
+ V + LI+
Sbjct: 545 VDHVPFQLLIKN 556
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 197/411 (47%), Gaps = 51/411 (12%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +F+T+ RG GR D ++ + F + P+ K + ++ D+LV+E+ + A FY
Sbjct: 85 EDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFY- 143
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNR-VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M G+ + IL+K LC V F+L M +RG +P+S Y TLI+ LCK
Sbjct: 144 KEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCK 203
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ +A+ L+ +MEE P+ V+++ LI C+ NL A+ LLE+ G P+V T
Sbjct: 204 LGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFT 263
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +++ LC G A+E+LE M R+ LPN+ TY+ LI+
Sbjct: 264 YSSLMDGLCKSGHSSQAMELLE-------------------VMVRRRLLPNMVTYSTLIN 304
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G A+++ + M++ G+ + Y +I GLC+ + + M +
Sbjct: 305 GLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEM------A 358
Query: 305 KGRISP-----------YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG--- 350
G ISP +N V+ GL A + M R + +
Sbjct: 359 LGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRT---RGISVEIGTFDCLV 415
Query: 351 --FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
FC G++ A R ++MI +G +P+ +++ L+ ++VRE +EL+
Sbjct: 416 KCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELL 466
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 220/484 (45%), Gaps = 45/484 (9%)
Query: 47 KIFNSILDVLVKEDIDLARAFY----RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
+I NS+++ L+K + D+ + + ++G + D T+ ++ L N+
Sbjct: 12 QITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEG 71
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+L MK + ++ T+ + + A + ME+ P ++ +
Sbjct: 72 MLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILV 131
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+E ++ A+ ++ G P VV++ +++ LC EE+ V+
Sbjct: 132 EENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKN----------EET--------VE 173
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
R +EM +GC P+ TY LI+ C+ G + A ++ ++M+ G+S + V+Y +LI
Sbjct: 174 SAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLI 233
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
GLC +D+ +++L+ M G + + Y+S++ GL + +A+E L+ M +
Sbjct: 234 HGLCQSNNLDEAIELLEEM--IINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRR 291
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
L P V S I G C +G +A D+M +G P+ +Y +I C +EA+
Sbjct: 292 LLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAA 351
Query: 397 ELMKEMTGHGYLPIASTF-------NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+ EM G P +++ N V+ GLC + A +L MR RG
Sbjct: 352 NFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYL-SMRT--RGISVEI 408
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL-----SQQTTWLLLL 504
G + L+K C++G A+ +L +M+ G +PD WN L+ L ++TT LL+
Sbjct: 409 GTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVA 468
Query: 505 LLNE 508
L +
Sbjct: 469 ELKQ 472
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 153/359 (42%), Gaps = 58/359 (16%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKS---FSFGFVPDVVTITKVLELLCSVGRVMDA 201
P +T S++ E+++ LV+ + + +S GF D T ++ L SV + A
Sbjct: 10 PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69
Query: 202 VEILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+LE ++ GR+ + R +ME P +Y +
Sbjct: 70 EGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDI 129
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR-IDDGLKILQLMEDSKEGS 304
E + A+ + +M+ GI V+ + LI+ LC ++ ++ + M +
Sbjct: 130 LVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPN----- 184
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
R +S YG I G C G + AK
Sbjct: 185 --RGCQPDSYTYGTL----------------------------INGLCKLGKISQAKELL 214
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M E+G P+VV Y LIH CQ + EA EL++EM +G P T+++++ GLC+
Sbjct: 215 DEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKS 274
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G+ A++L+E +R R LP YS LI LC++G + A +L +M +G+ PD
Sbjct: 275 GHSSQAMELLEVMVR---RRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPD 330
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 227/495 (45%), Gaps = 67/495 (13%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P + NS+L+VLVK +++A Y + + +G + D+YT I++KGLC +V DG+K
Sbjct: 135 PDVFSCNSLLNVLVKHGKVEIACKVYDEMVDRNG-EVDNYTVCIMVKGLCKEGKVEDGWK 193
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
L+ RG PN V YNTLI CK G RA L +++ P T+ +I +C
Sbjct: 194 LIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFC 253
Query: 159 KE-------------------------ENLVNALV----LLEKSFSFGFV------PDVV 183
K+ N+++A +E + + G++ PD+
Sbjct: 254 KKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMA 313
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ CS G V A ++LE++ ++G LPN +Y LI
Sbjct: 314 TYNILITGSCSCGEVHKAEQLLEQA-------------------IKRGLLPNKVSYTPLI 354
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+YC+ G ALD+ M G + VTY LI GL G +D L + M ++G
Sbjct: 355 HNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKM--VEKG 412
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN ++ GL ++ + A L +M + + P A + + GF G+ E+AK
Sbjct: 413 VLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAK 472
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ F+ IE+G P VV Y+ +I YC+ +++A K M + P T++T++ G
Sbjct: 473 KLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGY 532
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ ++ AL++ ++G + P Y+ LI C G A QM+ +
Sbjct: 533 IKMNDLHGALRMFGLMVKGACK---PNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLK 589
Query: 482 PDYLTWNSLLICLSQ 496
P+ +T+ L+ C +
Sbjct: 590 PNVVTYTILIGCFCK 604
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 221/524 (42%), Gaps = 49/524 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + +I G + V K +S + S+ I+N+I+D K + A
Sbjct: 240 PTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADT 299
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ SG D TY IL+ G C V +LL RG+ PN V Y LIH+ CK
Sbjct: 300 VGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCK 359
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ RA L+ M E P+ VT++ LI + AL + K G +PD
Sbjct: 360 QGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANI 419
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC GR + A ++L L EM + P+ L+
Sbjct: 420 YNVLMSGLCKKGR-LPAAKVL------------------LAEMLDQNVAPDAFITATLVD 460
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ G + A +F GI V Y+ +I+G C G + D L + M
Sbjct: 461 GFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRM------I 514
Query: 305 KGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
+G SP Y++++ G + N AL M K P V +L I GFC+ G++
Sbjct: 515 QGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDIN 574
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A++ F QM+ PNVV Y LI +C+ + +A ++M LP T+N ++
Sbjct: 575 RAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLM 634
Query: 419 SGLC--------RQGNVGTALKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
+GL Q + T LV E I G + Y+ ++ LC+ + A
Sbjct: 635 NGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHAL 694
Query: 470 MLLVQMVGKGILPDYLTWNSLL--ICL---SQQTTWLLLLLLNE 508
L +M+ KG LPD ++ +LL +CL SQ ++ LNE
Sbjct: 695 HLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLNE 738
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 209/463 (45%), Gaps = 36/463 (7%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
++P + +NS++D K A +M G D TY L+ C ++ F
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAF 379
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+ MK+ G+KPN V Y+TLI + CK G + A L DM PN+ T++ LI A
Sbjct: 380 EYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDAN 439
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK NL A LL G ++VT T +L+ LC GR+++A E+
Sbjct: 440 CKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF------------ 487
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ M + G PN Y L+ Y + ++ A+ + M I + + Y ++
Sbjct: 488 -------RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSI 540
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I G CS ++++ IL+ M+ + IS +++ ++ + +AL + ++M+ +
Sbjct: 541 IWGHCSQRKLEETKLILEEMKSRGISANPVIS--TTIIDAYFKAGKSSDALNFFQEMQDV 598
Query: 338 FPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
A V + I G C G VE A F +M+ G PNV +Y LI C+ + A
Sbjct: 599 GVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESA 658
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSP 454
+L EM G P + F ++ G + GN+ AL L+ + ++ H Y+
Sbjct: 659 KKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISR----MTELAIEFDLHVYTS 714
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
L+ + G A +M+ KGILP+ + L ICL ++
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEV----LCICLLRE 753
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 188/395 (47%), Gaps = 26/395 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P++ +++++D KE + M +G+ +++TY L+ C + + +
Sbjct: 390 LKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAW 449
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAY 157
KLL+ M GVK N V Y L+ LCK G++ A RS++ D PN ++ L+ Y
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
K E + +A+ +L++ PD++ ++ CS ++ + ILEE +G
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ GK F +EM+ G + TY +LI C+ G+++ A+D F
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCR 629
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G+ N Y +LI GLC I+ K+ M+ G I+ + +++ G +
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQ--CRGMTPDITAFTALIDGNLKH 687
Query: 322 NQQDEALEYLKQMEKL---FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
EAL + +M +L F V SL + GF G + A++ F++MIE+G +P V+
Sbjct: 688 GNLQEALVLISRMTELAIEFDLHVYTSL-VSGFSQCGELHQARKFFNEMIEKGILPEEVL 746
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
CL+ Y + ++ EA EL EM G + ++T
Sbjct: 747 CICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 220/521 (42%), Gaps = 83/521 (15%)
Query: 14 FITVIRGLGRARMI---NDVVKATDLVSRFNM-TPSLKIFNSILDVLVKEDIDLARAFYR 69
+ ++ + RARM +D VK + SR +M P IF+ +
Sbjct: 166 YCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWST-------------- 211
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ + SG D +++ ++ L L + F M++ P + N L+H L K+
Sbjct: 212 RNICVSGSGVFDVLFSVFVE-LGLLEEANECFSR---MRNFRTLPKARSCNFLLHRLSKS 267
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G R +DM P+ T++++I CKE +L N+ L + G PDVVT
Sbjct: 268 GNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTY 327
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ G++G ++ EM+ GC+P++ TYN LI+
Sbjct: 328 NSLID-------------------GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINC 368
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC+ + A + F++MK +G+ N VTY TLI C G + +K+ M + G
Sbjct: 369 YCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMR--RTGLL 426
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSLKILGFCVDGNVEDAKRC 363
Y S++ + EA + L M + + V + + G C G + +A+
Sbjct: 427 PNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEV 486
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F M+++G PN +Y L+H Y + ER+ +A +++K+MT P + +++ G C
Sbjct: 487 FRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCS 546
Query: 424 QGNVGTALKLVEEDMRGIGRGSLP-----------GSGH--------------------- 451
Q + KL+ E+M+ G + P +G
Sbjct: 547 QRKLEET-KLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIV 605
Query: 452 -YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y LI LC+ G + A +M+ G+ P+ + SL+
Sbjct: 606 TYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 58/298 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSIL-----------DVLV 57
P++ ++ ++ G +A + D +K ++ N+ P L ++ SI+ L+
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 556
Query: 58 KEDID-------------LARAFYR-----------KKMMASGVQGDDYTYAILMKGLCL 93
E++ + A+++ ++M GV+ TY +L+ GLC
Sbjct: 557 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCK 616
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
V M S G++PN +Y +LI LCKN + A+ L +M+ P+
Sbjct: 617 AGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITA 676
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ LI K NL ALVL+ + D+ T ++ G +
Sbjct: 677 FTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGEL----------- 725
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
Q R +F EM KG LP L+ Y + G LD A+++ N+M+ G+
Sbjct: 726 HQAR--------KFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +E+A CF +M +P + L+H + + + +M G G P T+
Sbjct: 233 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 292
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ LC++G++ + +L + MR +G P Y+ LI + G + + L +
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQ-MREMGLS--PDVVTYNSLIDGYGKVGSLEEVASLFNE 349
Query: 475 MVGKGILPDYLTWNSLLIC 493
M G +PD +T+N L+ C
Sbjct: 350 MKDVGCVPDIITYNGLINC 368
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 231/533 (43%), Gaps = 100/533 (18%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDIDLARA 66
E FI V R G+A + KA DL R F S+K FNS+L+V++ E +
Sbjct: 112 ERSFIVVFRAYGKAHLPE---KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGL----- 163
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++R G++ DY +++ + + PN + +N +I +L
Sbjct: 164 YHR------GLEFYDY--------------------VVNSNMNMNISPNGLSFNLVIKAL 197
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G V RA + M E P+ T+ L+ CKEE + A++LL++ S G P
Sbjct: 198 CKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V +++ LC ++G L +V + + M KGC PN TYN L
Sbjct: 258 VIYNVLIDGLC----------------KKGDLSRVT---KLVDNMFLKGCFPNEVTYNTL 298
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C G LD A+ + M N VTY TLI GL R DG ++L ME+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEE--R 356
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + Y+ ++ GL++E + +EA+ K+M + P V S I G C +G +A
Sbjct: 357 GYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEA 416
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAY---------------------------------- 386
K + MI G +PNV Y L+ +
Sbjct: 417 KEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDG 476
Query: 387 -CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C RV+EA + +M G P +++++ GLC G++ ALKL E + S
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
P Y+ L+ LC + A LL M+ +G PD +T N+ L LS+++
Sbjct: 537 QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKS 589
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 200/454 (44%), Gaps = 53/454 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T++ GL + I++ V D + +PS I+N ++D L K+ DL+R
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG-DLSRVTK 278
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G ++ TY L+ GLCL ++ LL M S PN V Y TLI+ L
Sbjct: 279 LVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + L+ MEE N +S+LI KE A+ L +K G P++V
Sbjct: 339 KQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIV 398
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ V++ LC G+ +A EI L M GCLPNV TY+ L+
Sbjct: 399 VYSAVIDGLCREGKPNEAKEI-------------------LNGMISSGCLPNVYTYSSLM 439
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +TG+ + A+ V+ +M G S N Y LI GLC GR+ + + + M G
Sbjct: 440 KGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTI--G 497
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-----EKLFPRAVDRSLKILGFCVDGNVE 358
K Y+S++ GL D AL+ +M K P V ++ + G C+ +V
Sbjct: 498 IKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVS 557
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAY------CQE---------------ERVREASE 397
A + M++ G P+V+ + ++ C+E +RV A +
Sbjct: 558 RAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACK 617
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+++ M G P ST+ ++ +C+ + A+
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVPEICKPKKINAAI 651
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 218/477 (45%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ + L+KG C R +
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVNIIIANHLLKGFCEAKRTDEA 165
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ Y+ L+ SLC GK G+A L+ M E P+ V +S +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTV 225
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQG 212
I + KE ++ A L ++ G PD VT + V+ LC R MD E L + +G
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCK-ARAMDKAEAFLRQMVNKG 284
Query: 213 RL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
L G+ K R KEM R LP+V T ++L+ S C+ G + A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + N +Y ++ G + G + D + LM +G I +N ++
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLM--LGDGIAPDIYTFNVLIK 402
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D+A+ +M + P V I C G ++DA F+QMI++G P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ Y CLI +C + +A EL+ E+ +G F+++++ LC+ G V A +
Sbjct: 463 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + G P + YS L+ C G + A + MV GI P+ + + +L+
Sbjct: 523 D---LTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 211/487 (43%), Gaps = 67/487 (13%)
Query: 71 KMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MMA G D Y+ ++ G V L M RG+ P+ V Y++++H+LC
Sbjct: 206 RMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALC 265
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + +A + + M PN+ T++ LI Y A+ + ++ +PDVV
Sbjct: 266 KARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL---------- 233
T++ ++ LC G++ +A ++ + +G+ V L KGCL
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLM 385
Query: 234 ------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
P++ T+N+LI +Y G+LD A+ +FN+M+ G+ + VTY T+I LC G++
Sbjct: 386 LGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----------- 336
DD ++ M D +G Y+ ++ G +A E + ++
Sbjct: 446 DDAMEKFNQMID--QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503
Query: 337 --------------------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
L P AV S+ + G+C+ G +E A R FD M+
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG-NVGT 429
G PN V+Y L++ YC+ R+ E L +EM G P +N ++ GL G V
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
+K E GI Y+ +++ L + F A L ++ + + +T N+
Sbjct: 624 KVKFHEMTESGIAMNKCT----YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 490 LLICLSQ 496
++ + Q
Sbjct: 680 MIAGMFQ 686
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 192/460 (41%), Gaps = 65/460 (14%)
Query: 63 LARAFYRKKMMASGVQGD------DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
LA A + + AS QG +TYAILM +R + G++ N
Sbjct: 89 LAVALFNRA--ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 146
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I N L+ C+ + A +LL ++
Sbjct: 147 IIANHLLKGFCEAKRTDEALD------------------------------ILLHRTPEL 176
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV + + +L+ LC G+ A ++L E G + C P+V
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-----------------CSPDV 219
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
Y+ +I + + G ++ A D+F +M GI +FVTY +++ LC +D L+
Sbjct: 220 VAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQ 279
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M + +G YN+++YG Q EA+ K+M + + P V S+ + C
Sbjct: 280 MVN--KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKY 337
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +++A+ FD M +G PNV Y +++ Y + + + ++L M G G P TF
Sbjct: 338 GKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 397
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ G + A+ + E MR G P Y +I ALC G A Q
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNE-MR--DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVM 514
M+ +G+ PD ++ L+ + LL E++S +M
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGS---LLKAKELISEIM 491
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 175/424 (41%), Gaps = 61/424 (14%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D YT+ +L+K + + + M+ GVKP+ V Y T+I +LC+ GK
Sbjct: 385 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + M + P+ + LI +C +L+ A L+ + + G D+V +
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ LC +GRVMDA I + + G P Y++L+ YC
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVG-------------------LHPTAVVYSMLMDGYC 545
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G ++ AL VF+ M GI N V Y TL+ G C GRID+GL + + M ++G K
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM--LQKGIKPS 603
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN ++ GL+ G AK F +M
Sbjct: 604 TILYNIIIDGLFEA---------------------------------GRTVPAKVKFHEM 630
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
E G N Y+ ++ + EA L KE+ T NT+++G+ + V
Sbjct: 631 TESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRV 690
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A L R G +P YS +I L ++G + A + M G PD
Sbjct: 691 EEAKDLFASISRS---GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 747
Query: 488 NSLL 491
N ++
Sbjct: 748 NHVV 751
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 140/331 (42%), Gaps = 25/331 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + TVI L R ++D ++ + + + P ++ ++ L
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 486
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M +G+ D ++ ++ LC RV D + + + G+ P +V+Y+ L+ C
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ +A + M EPNDV + L+ YCK + L L + G P +
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ L GR + A KVK EM G N TYNI++
Sbjct: 607 YNIIIDGLFEAGRTVPA--------------KVK-----FHEMTESGIAMNKCTYNIVLR 647
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ D A+ +F +++ + N +T +T+I G+ R+++ + + S+ G
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASI--SRSGL 705
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME 335
+ Y+ ++ L +E +EA + M+
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 4/207 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P++ ++ T++ G + I++ + + + + PS ++N I+D L + +
Sbjct: 567 PNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 626
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M SG+ + TY I+++GL + L +++ VK N + NT+I + +
Sbjct: 627 FHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQ 686
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+V A+ L + + P VT+SI+I KE + A + + G PD
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ 211
+ V+ L ++ A L + E+
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDER 773
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 237/503 (47%), Gaps = 36/503 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMAS 75
+++GL R V + R ++ P + +N+++ E +L +A +M S
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC-EGKELEKALELANEMKGS 206
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G T+ IL+ C ++ + L MK G++ + V+Y +LI C G++ R
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
++L ++ E P +T++ LI +CK L A + E G P+V T T +++
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC VG+ +A+++L M K PN TYNI+I+ C+ G+
Sbjct: 327 LCGVGKTKEALQLL-------------------NLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A+++ MK + +TY+ L+ GLC+ G +D+ K+L LM + + Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 312 NSVLYGLYRENQQDEALE-YLKQMEKLFP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N++++GL +EN+ +AL+ Y +EKL V ++ + G+V A + Q+ +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
V N Y +I +C+ + A L+ +M P +N +LS LC++G++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L EE R + P ++ +I + G +SA LLV M G+ PD T++
Sbjct: 548 AWRLFEEMQRD---NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 490 LLICLSQQTTWLLLLLLNEMVSF 512
L+ +L L L+E +SF
Sbjct: 605 LI------NRFLKLGYLDEAISF 621
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 145/560 (25%), Positives = 260/560 (46%), Gaps = 64/560 (11%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGL--CLTN--RVGDGFKLL 104
N+++ LV+ + +LA +FYRK + + D + + + GL C + G F +L
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKML-----ETDTFINFVSLSGLLECYVQMRKTGFAFGVL 130
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
+M RG N +N L+ LC+N + G+A SL+ +M P+ +++ +I +C+
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------- 212
+ L AL L + G +VT +++ C G++ +A+ L+E G
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 213 --------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
G++ G E+ +G P TYN LI +C+ G L A ++F M
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ N TY LI GLC G+ + L++L LM + E YN ++ L ++
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA--VTYNIIINKLCKDGLV 368
Query: 325 DEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYD 380
+A+E ++ M+K R + + IL G C G++++A + M+++ P+V+ Y+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 381 CLIHAYCQEERVREA---SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
LIH C+E R+ +A +L+ E G G T N +L+ + G+V A++L ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQ- 484
Query: 438 MRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I + S Y+ +I C+ G A LL +M + P +N LL L +
Sbjct: 485 ---ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 497 Q----TTWLLLLLLN------EMVSF-VMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGL 545
+ W L + ++VSF +M+ L A + ++S L G GL
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD----IKSAESLLVGMSRA--GL 595
Query: 546 RIHDTTHTFIIDRRVEIGHV 565
T++ +I+R +++G++
Sbjct: 596 SPDLFTYSKLINRFLKLGYL 615
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 151/351 (43%), Gaps = 30/351 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + ++ +L+ + P+ +N I++ L K+ +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNTLIHSL 126
+ M + D+ TY IL+ GLC + + KLL++M S P+ + YN LIH L
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 127 CKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK ++ +A L+ + + VT +IL+ + K ++ A+ L ++ V +
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 183 VTITKVLELLCSVG-------------------RVMDAVEILEESGEQGRLGKVKGGCRF 223
T T +++ C G V D +L ++G L + R
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ---AWRL 551
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM+R P+V ++NI+I + G + SA + M G+S + TY LI
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G +D+ + M DS I +SVL + + D+ E +K++
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHIC--DSVLKYCISQGETDKLTELVKKL 660
>gi|302785101|ref|XP_002974322.1| hypothetical protein SELMODRAFT_30949 [Selaginella moellendorffii]
gi|300157920|gb|EFJ24544.1| hypothetical protein SELMODRAFT_30949 [Selaginella moellendorffii]
Length = 522
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 136/511 (26%), Positives = 228/511 (44%), Gaps = 41/511 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTP---SLKIFNSILDVLVKED-IDLARAFYR 69
F ++ GL +A I++ ATD R + S+ ++NS++D LVK +D A +
Sbjct: 4 FGFLVTGLCKAGKISE---ATDHYQRLRKSLRFLSVVVYNSLIDGLVKAKLVDKALEIFS 60
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M + Q + +TY L+ GLC R+ + +L M R P+ V+Y T+I LCK
Sbjct: 61 RDMDEALCQPNSHTYGALVSGLCKAGRIAEACELFQQMIERRYTPHVVLYTTVIDGLCKA 120
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKV 188
+ +A S + ME P+ VT+S I C + A LL++ G PDVV T
Sbjct: 121 RQFDKACSYLEKMESPDIVTYSAFIDGLCNVGKVDYAFELLKQIQERGNARPDVVLYTIF 180
Query: 189 LELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGC 232
++ LC G+V +AVE+ + + G V R EM RKGC
Sbjct: 181 IKGLCKAGQVDNAVELFYKMEDIGCPPNAVTYNSLMRALAWHKSVDAARRLFTEMIRKGC 240
Query: 233 ------LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
P V Y L+ ++ ++ DM G S N +DTL+R L + G+
Sbjct: 241 EPDGATYPTVGMYATLVRAFLRDERAMEVDELVKDMVRRGCSINHHLWDTLVRMLFTSGK 300
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ L + + + + G + + Y ++ GL R + +AL ++M + + R +
Sbjct: 301 LKISLTVAE--QALERGCEIHVLTYYEIIRGLVRLGKVSKALAQFQKMVEHGKPTLSRQM 358
Query: 347 KIL------GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ C G +EDA +M++ G P + Y LI + + + + +L +
Sbjct: 359 AMVHSSLVTKLCRRGRLEDAYELHQKMVKRGLSPTIKSYKLLIKYHFKAGKAGVSRQLFE 418
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M T+ +L G C+ G + A +EE + R P Y LI+ LC
Sbjct: 419 QMQKVDSPQTRDTYRVLLEGYCQAGMLDEAYGALEET---VARQFKPTGASYLELIRKLC 475
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E G + A +L +MV G P L++N++
Sbjct: 476 ELGRTEEAHHILQRMVSLGHRPLLLSYNAVF 506
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 180/425 (42%), Gaps = 41/425 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P ++ TVI GL +AR + KA + + +P + +++ +D L +D A
Sbjct: 105 PHVVLYTTVIDGLCKARQFD---KACSYLEKME-SPDIVTYSAFIDGLCNVGKVDYAFEL 160
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ + D Y I +KGLC +V + +L + M+ G PN+V YN+L+ +L
Sbjct: 161 LKQIQERGNARPDVVLYTIFIKGLCKAGQVDNAVELFYKMEDIGCPPNAVTYNSLMRALA 220
Query: 128 KNGKVGRARSLMSDME----EPNDVTF------SILICAYCKEENLVNALVLLEKSFSFG 177
+ V AR L ++M EP+ T+ + L+ A+ ++E + L++ G
Sbjct: 221 WHKSVDAARRLFTEMIRKGCEPDGATYPTVGMYATLVRAFLRDERAMEVDELVKDMVRRG 280
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
+ ++ +L + G++ ++ + E++ E+G RLGKV
Sbjct: 281 CSINHHLWDTLVRMLFTSGKLKISLTVAEQALERGCEIHVLTYYEIIRGLVRLGKVSKAL 340
Query: 222 RFLKEMERKGCLPNVD-----TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
++M G P + ++ L++ C G L+ A ++ M G+S +Y
Sbjct: 341 AQFQKMVEHG-KPTLSRQMAMVHSSLVTKLCRRGRLEDAYELHQKMVKRGLSPTIKSYKL 399
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
LI+ G+ ++ + M+ K S Y +L G + DEA L++
Sbjct: 400 LIKYHFKAGKAGVSRQLFEQMQ--KVDSPQTRDTYRVLLEGYCQAGMLDEAYGALEETVA 457
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ P I C G E+A +M+ G P ++ Y+ + AY + R
Sbjct: 458 RQFKPTGASYLELIRKLCELGRTEEAHHILQRMVSLGHRPLLLSYNAVFQAYYESGRFAN 517
Query: 395 ASELM 399
A E+
Sbjct: 518 AREVF 522
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
L+ GLC G+I + Q + S + YNS++ GL + D+ALE
Sbjct: 7 LVTGLCKAGKISEATDHYQRLRKSLRFLS--VVVYNSLIDGLVKAKLVDKALE------- 57
Query: 337 LFPRAVDRSL----------KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+F R +D +L + G C G + +A F QMIE P+VV+Y +I
Sbjct: 58 IFSRDMDEALCQPNSHTYGALVSGLCKAGRIAEACELFQQMIERRYTPHVVLYTTVIDGL 117
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGS 445
C+ + +A +++M P T++ + GLC G V A +L+++ RG R
Sbjct: 118 CKARQFDKACSYLEKMES----PDIVTYSAFIDGLCNVGKVDYAFELLKQIQERGNAR-- 171
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
P Y+ IK LC+ G +A L +M G P+ +T+NSL+ L+
Sbjct: 172 -PDVVLYTIFIKGLCKAGQVDNAVELFYKMEDIGCPPNAVTYNSLMRALA 220
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 187/398 (46%), Gaps = 26/398 (6%)
Query: 49 FNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+N +L+VL K D Y M+A+G + YTY L++ LC R + + M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTY-NDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENL 163
++G PN Y+ LI LC+ KV A L+++M +PN VT+ L+ CK L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
A+ L + G PD V +++ G + +A + EE E+G
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 213 -----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
R G+ K+M R+GC+PN+ T+N L+ +C+ G + A +F +M+ G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ V+Y+TLIRG+CS G+ + ++L+ M S G I YN ++ G + D A
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD--IVSYNILIDGYSKSGALDHA 316
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
++ ++ K L P A S I C G V A F MI G P+ + L+
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
C+ ER+ E+ EL + M +P+ +N ++ LC+
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 192/425 (45%), Gaps = 34/425 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
+Y L++ L + R + + M + G PN+ Y L+ SLC+ + ARS+ M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
PN ++SILI C+ + + A LL + G P+VVT +L LC +G++
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+AV++ M +GC P+ YN+LI + + G + A +
Sbjct: 139 KEAVDLF-------------------SRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYG 317
F +M G TY++L+ G G ++ L +D ++G I +N++L G
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFG---RVQSLFKDMLRQGCVPNIFTFNNLLDG 236
Query: 318 LYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
+ EA +M L P V + I G C G +A+R +MI G P+
Sbjct: 237 FCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPD 296
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+V Y+ LI Y + + A +L E+ G P A +++T++ LCR G VG A +V
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAF-VVF 355
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
+DM I GS P + PL+ LC + L MV +P +N L+ +C
Sbjct: 356 KDM--IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC 413
Query: 494 LSQQT 498
++++
Sbjct: 414 KAKRS 418
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 129/282 (45%), Gaps = 22/282 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PPD ++ +I G + + + + + + P++ +NS+L ++ + ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ K M+ G + +T+ L+ G C + + +L M+S G P+ V YNTLI +
Sbjct: 214 LF-KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGM 272
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C GK A+ L+ +M P+ V+++ILI Y K L +A+ L + G PD
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGR-----------LGKVKG-----GCRFLKE 226
+ + +++ LC G+V A + ++ G +G +G C +
Sbjct: 333 FSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQA 392
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
M + C+P + YN+L+ C+ D ++F+++ G S
Sbjct: 393 MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-ID 62
S+ PPD + T+IRG+ ++ + + R + P + +N ++D K +D
Sbjct: 255 SLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314
Query: 63 LA-RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
A + FY ++ SG++ D ++Y+ ++ LC +VG F + M + G P++ +
Sbjct: 315 HAIKLFY--EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+ LC+ ++ + L M + P +++L+ CK + + + + G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 178 FVPDVVTITKVLELL 192
F PDV +LE L
Sbjct: 433 FSPDVEISKVILETL 447
>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
Length = 800
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 227/500 (45%), Gaps = 46/500 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKE--DIDLAR 65
P + F +I A ++ V+A + + F P+ ++N++L VLV + LA
Sbjct: 137 PPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLAL 196
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A Y +M+A+G + TY +L+ GLC D KL M SRG+ PN + L+ S
Sbjct: 197 ALY-NRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSS 255
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG-FVP 180
+C G++ A +L+ ME+ P++VT++ + CK + A+ LE G FV
Sbjct: 256 MCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVL 315
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRF 223
+ + +++ L GR + + E EQ + G+ F
Sbjct: 316 GLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAF 375
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
EM+ KG P+ YN L+ + C+ G LD A + ++M + + + TY T+I GLC
Sbjct: 376 FDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCK 435
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-----KLF 338
+D+ +++ M + G + YN ++ GLYR ++ +EA +ME LF
Sbjct: 436 EQLVDEAMQVFDGMVEV--GCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLF 493
Query: 339 PRAV--------DRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
R +L+ L C G V A + +I+ G VP+VV Y+ L++ C+
Sbjct: 494 LRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCK 553
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ A L +E+ G+ T+ T++ L R AL L ++ + G S+P
Sbjct: 554 VRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMP- 612
Query: 449 SGHYSPLIKALCEKGGFQSA 468
Y+ ++++LC A
Sbjct: 613 --IYNSMMRSLCRMQKLSQA 630
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 190/441 (43%), Gaps = 80/441 (18%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEEN 162
++ G++P + + LI + G+ A S ME P ++ ++
Sbjct: 131 QAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGG 190
Query: 163 LVN-ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC 221
V AL L + + G +P+ T ++ LC G +DA+++ +E
Sbjct: 191 AVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDE-------------- 236
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
M +G PNV T+ IL+SS C G L A ++ + M+ G + VTY+ + GL
Sbjct: 237 -----MISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGL 291
Query: 282 CSGGRIDDGLKILQLMEDSKE---GSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEK- 336
C GR+D+ ++ L+ + + G KG Y+ ++ GL+ + +E + Y++ +E+
Sbjct: 292 CKAGRVDEAIERLEALRHTGTFVLGLKG----YSCLIDGLFLAGRYEEGFQCYMEVLEQA 347
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P V ++ I G G DA FD+M E+G P+ Y+ L+ A C + A
Sbjct: 348 DVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGA 407
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE-------------------- 435
LM EM + + T+ T++ GLC++ V A+++ +
Sbjct: 408 RSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDG 467
Query: 436 -------EDMR------------------GIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
E+ R +G + S L++++C+ G A
Sbjct: 468 LYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYK 527
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
LL ++ G++PD +T+N+LL
Sbjct: 528 LLRGIIDSGVVPDVVTYNTLL 548
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 235/560 (41%), Gaps = 89/560 (15%)
Query: 3 HSIQS---PPDESIFITVIRGLGRARMINDVVKATDLVSRF-NMTPSLKIFNSILD-VLV 57
HS++ PPDE + + GL +A +++ ++ + + LK ++ ++D + +
Sbjct: 270 HSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFL 329
Query: 58 KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+ Y + + + V D Y I+++G R D F MK +G P++
Sbjct: 330 AGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTF 389
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKS 173
YNTL+ +LC G + ARSLMS+M N V T++ +I CKE+ + A+ + +
Sbjct: 390 CYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGM 449
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILE--ESGEQGRL----------------- 214
G P V+T +++ L R+ +A + E G L
Sbjct: 450 VEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETL 509
Query: 215 ----------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
G+V + L+ + G +P+V TYN L++ C+ LD AL +F ++++
Sbjct: 510 QKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQV 569
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + +TY TLI L R +D L + Q + S G + YNS++ L R
Sbjct: 570 KGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHS--GGTPSMPIYNSMMRSLCR---- 623
Query: 325 DEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
++ L Q L+ + R +L D + A++ F EEG
Sbjct: 624 ---MQKLSQAINLWFDHLPRKYNLLA--QDEVISSARKKF----EEG------------- 661
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK---LVEEDMRGI 441
C E VRE ++ +E P + L GL + G + ALK ++EE
Sbjct: 662 --CLHEAVRELIKIDQEYGSVNSCP----YTIWLIGLIQAGRIEDALKIFHILEES---- 711
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL------- 494
G P + L K LC +G +A +++ + KG N LL L
Sbjct: 712 GIDITPACCVH--LSKYLCLEGNLGAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRK 769
Query: 495 -SQQTTWLLLLLLNEMVSFV 513
+Q W + L+ +M +++
Sbjct: 770 DAQALAWRMHLVGYDMDAYL 789
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 146/361 (40%), Gaps = 67/361 (18%)
Query: 144 EPNDVTFSILICAYC---KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+P F LI A+ + V A +E F G P VL +L + G
Sbjct: 136 QPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEF--GCRPTTFVYNAVLRVLVASG---- 189
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
G V M GCLPN TYN+LI C+ G AL +F+
Sbjct: 190 --------------GAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFD 235
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+M GI+ N T+ L+ +C+ G++ + +L MED +G YN+ L GL +
Sbjct: 236 EMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMED--KGCPPDEVTYNAFLSGLCK 293
Query: 321 ENQQDEALEYLKQMEKLFPRAVD---RSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNV 376
+ DEA+E L+ + + S I G + G E+ +C+ +++E+ V P++
Sbjct: 294 AGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDI 353
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V+Y +I + R +A EM G+ P +NT
Sbjct: 354 VLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNT-------------------- 393
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L+KALC+ G A L+ +MV ++ D T+ +++I L +
Sbjct: 394 ------------------LLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCK 435
Query: 497 Q 497
+
Sbjct: 436 E 436
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 253 DSAL-DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D+A+ D D + G+ ++ LI S GR + ++ ME + G + Y
Sbjct: 120 DAAMYDAIADAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRME-GEFGCRPTTFVY 178
Query: 312 NSVLYGLYRENQQDE-ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
N+VL L AL +M P ++ I G C G DA + FD+MI
Sbjct: 179 NAVLRVLVASGGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMI 238
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G PNV + L+ + C +++EA L+ M G P T+N LSGLC+ G V
Sbjct: 239 SRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVD 298
Query: 429 TALKLVEEDMRGIGRGSLPGSGH-----------------------------------YS 453
A++ +E +R G L G+ Y+
Sbjct: 299 EAIERLEA-LRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYT 357
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+I+ E G A +M KG PD +N+LL L
Sbjct: 358 IMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKAL 398
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 217/499 (43%), Gaps = 31/499 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + ++ L I + ++ + + S+ NSIL +K +L F
Sbjct: 154 PDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEF 213
Query: 68 YRKKMMASGVQGDDYTYAI--LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
Y ++M+ +G D T + L++ C + +V G++LL+ G+ P + YN LI
Sbjct: 214 Y-QEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAG 272
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ ++ M P T+ +I CK E + A + G+ PD
Sbjct: 273 FCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPD 332
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
V T ++ LC +G +A ++ E ++G + G + C
Sbjct: 333 RVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYN 392
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM KG T N +IS C G D A +VF M GI + +TY++LIRG C G
Sbjct: 393 EMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEG 452
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
++D+ + +L E + + +S Y ++ ++ + A L M L P A
Sbjct: 453 KVDERMNLLN--ELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYT 510
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ G G+ E + +++ +G + +I C + EASE+ K+M+
Sbjct: 511 YDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMS 570
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G A T+N+++ G C++G VG ++ L+ E + +G P + Y+ LI LC+ G
Sbjct: 571 ETGIKADAITYNSLIRGFCKEGKVGKSMNLLNEL---VAQGLQPSASSYASLIIQLCQNG 627
Query: 464 GFQSASMLLVQMVGKGILP 482
+SA L MV KGI P
Sbjct: 628 DAESAKRLWGDMVSKGIEP 646
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 191/421 (45%), Gaps = 30/421 (7%)
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
YTY ++ GLC + +++ + +K RG P+ V+Y T+IH LC+ G G AR L +
Sbjct: 299 YTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFE 358
Query: 142 ME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M +PN T++ ++ K + A L + + G+ VT K++ LCS G+
Sbjct: 359 MMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGK 418
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+A E+ K+M G + TYN LI +C+ G +D ++
Sbjct: 419 SDEAFEVF-------------------KKMSETGIQADAITYNSLIRGFCKEGKVDERMN 459
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ N++ + Y+ LI C G + ++L M S +G Y+++L+G
Sbjct: 460 LLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDM--SSKGLHPNAYTYDTMLHG 517
Query: 318 LYRENQQDEALE-YLKQMEKLFPRAVDRSLKILG-FCVDGNVEDAKRCFDQMIEEGGVPN 375
+ + E Y + K + KI+ C G ++A F +M E G +
Sbjct: 518 SLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKAD 577
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
+ Y+ LI +C+E +V ++ L+ E+ G P AS++ +++ LC+ G+ +A +L
Sbjct: 578 AITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWG 637
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
DM + +G P + LI LC++G L+ M+ I P + L CL
Sbjct: 638 -DM--VSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKAAFEDLAECLI 694
Query: 496 Q 496
Q
Sbjct: 695 Q 695
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 157/373 (42%), Gaps = 66/373 (17%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGG 220
GF+PD ++ + ++ LC VG + +A+E+ + E G + GK +
Sbjct: 151 GFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELL 210
Query: 221 CRFLKEMERKGCL--PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
F +EM + G N +T LI ++C++G + ++ N G+ TY+ LI
Sbjct: 211 FEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLI 270
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
G C ++L M I Y ++ GL + +E LE + L
Sbjct: 271 AGFCQAKNYASMSEVLHTM--IARNHLPTIYTYQEIINGLCK---NEECLEAYRVFNDLK 325
Query: 339 PR--AVDR---SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA-------- 385
R A DR + I G C G+ +A++ + +M+++G PN Y+ ++H
Sbjct: 326 DRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFE 385
Query: 386 ---------------------------YCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
C + EA E+ K+M+ G A T+N+++
Sbjct: 386 RACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLI 445
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
G C++G V + L+ E + + P Y LI C+ G F++A LL M K
Sbjct: 446 RGFCKEGKVDERMNLLNEL---VAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSK 502
Query: 479 GILPDYLTWNSLL 491
G+ P+ T++++L
Sbjct: 503 GLHPNAYTYDTML 515
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 20/252 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
KKM +G+Q D TY L++G C +V + LL+ + ++ +P+ +Y LI CK+
Sbjct: 427 KKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKD 486
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G A+ L+ DM PN T+ ++ K + + L ++ + G+ T
Sbjct: 487 GDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATC 546
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
K++ LCS G+ +A E+ ++ E G + GKV L E+
Sbjct: 547 NKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVA 606
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+G P+ +Y LI C+ G +SA ++ DM GI + + LI GLC GR +
Sbjct: 607 QGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATE 666
Query: 290 GLKILQLMEDSK 301
G+ L M ++K
Sbjct: 667 GMDRLMGMLENK 678
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C P+ + N+L + + + +A V + I G + + + ++ LC G I++ +
Sbjct: 120 CTPDPISSNMLFEALLDAKAVRAAKMVRD---IAGFIPDSASLEQYVKCLCGVGFIEEAI 176
Query: 292 KI-LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
++ QL E G + I NS+L G + + + E+ ++M K A D + + +G
Sbjct: 177 EVYFQLKE---AGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKA-GTASDANTETVG 232
Query: 351 -----FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
FC G V +Q ++ G P Y+ LI +CQ + SE++ M
Sbjct: 233 CLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIAR 292
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+LP T+ +++GLC+ A ++ D++ RG P Y+ +I LCE G F
Sbjct: 293 NHLPTIYTYQEIINGLCKNEECLEAYRVFN-DLKD--RGYAPDRVMYTTMIHGLCEMGSF 349
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A L +M+ KG+ P+ T+N++L
Sbjct: 350 GEARKLWFEMMDKGMQPNAYTYNTML 375
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 47/493 (9%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKED-IDLARAFY---------RKKMMASGVQGDDYTYAI 86
+++ P + FN++L L ED I A A + +M+ G+ T+
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNT 226
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L+ GLCL RV + L++ M +G+ + V Y T+++ +CK G A +L+S MEE
Sbjct: 227 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 286
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P+ V +S +I CK+ + +A L + G P+V T +++ CS GR DA
Sbjct: 287 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 346
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R L++M + P+V T+N LIS+ + G L A + ++M
Sbjct: 347 -------------------RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEM 387
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
I + VTY+++I G C R DD + LM + + +N+++ R
Sbjct: 388 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTFNTIIDVYCRAK 441
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DE ++ L+++ + L + I GFC N+ A+ F +MI G P+ + +
Sbjct: 442 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 501
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV-EEDMR 439
L++ +C+ E++ EA EL + + +N ++ G+C+ V A L +
Sbjct: 502 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 561
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQQT 498
G+ P Y+ +I C K A++L +M G PD T+N+L+ CL
Sbjct: 562 GVE----PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 617
Query: 499 TWLLLLLLNEMVS 511
+ L++EM S
Sbjct: 618 IDKSIELISEMRS 630
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 223/494 (45%), Gaps = 44/494 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVV----------KATDLVSRFNMTPSLKIFNSILDVLVK 58
PD F T++ GL I++ + D + +TP + FN++++ L
Sbjct: 174 PDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCL 233
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
E L A KM+ G+ D TY ++ G+C LL M+ +KP+ VI
Sbjct: 234 EGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 293
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
Y+ +I LCK+G A+ L S+M E PN T++ +I +C +A LL
Sbjct: 294 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 353
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
PDV+T ++ S ++G+L + + C EM + P
Sbjct: 354 EREINPDVLTFNA----------------LISASVKEGKLFEAEKLC---DEMLHRCIFP 394
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+ TYN +I +C+ D A +F+ M S + VT++T+I C R+D+G+++L
Sbjct: 395 DTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLL 450
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
+ E S+ G + YN++++G + + A + ++M + P + ++ + GFC
Sbjct: 451 R--EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 508
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+ +E+A F+ + + V Y+ +IH C+ +V EA +L + HG P
Sbjct: 509 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 568
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+N ++SG C + + A L + M+ G P + Y+ LI+ + G + L+
Sbjct: 569 TYNVMISGFCGKSAISDANVLFHK-MK--DNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 625
Query: 473 VQMVGKGILPDYLT 486
+M G D T
Sbjct: 626 SEMRSNGFSGDAFT 639
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 210/463 (45%), Gaps = 54/463 (11%)
Query: 50 NSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N ++ V V+ + D+A + YRK M + + Y++ IL+K C +++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRK-MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--------------PNDVTFSILI 154
G +P+ V +NTL+H LC ++ A +L M E P +TF+ LI
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLI 228
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
C E ++ A L+ K G DVVT ++ +C ++
Sbjct: 229 NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC-------------------KM 269
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G K L +ME P+V Y+ +I C+ G A +F++M GI+ N TY
Sbjct: 270 GDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 329
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEY 330
+ +I G CS GR D ++L+ M + + I+P +N+++ +E + EA +
Sbjct: 330 NCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAEKL 383
Query: 331 LKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+M +FP V + I GFC +DAK FD M P+VV ++ +I YC+
Sbjct: 384 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCR 439
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+RV E +L++E++ G + +T+NT++ G C N+ A L +E I G P
Sbjct: 440 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE---MISHGVCPD 496
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + L+ CE + A L + I D + +N ++
Sbjct: 497 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 539
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 196/411 (47%), Gaps = 37/411 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
T++ G+ + + D A +L+S+ T P + I+++I+D L K+ + +M
Sbjct: 261 TIVNGMCK---MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 317
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G+ + +TY ++ G C R D +LL M R + P+ + +N LI + K GK+
Sbjct: 318 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 377
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L +M P+ VT++ +I +CK +A + F PDVVT +
Sbjct: 378 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTI 433
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+++ C R +V G + L+E+ R+G + N TYN LI +CE
Sbjct: 434 IDVYC-------------------RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 474
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L++A D+F +M G+ + +T + L+ G C ++++ L++ ++++ SK
Sbjct: 475 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD--T 532
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN +++G+ + ++ DEA + + + P ++ I GFC + DA F +
Sbjct: 533 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 592
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
M + G P+ Y+ LI + + ++ EL+ EM +G+ A T V
Sbjct: 593 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 643
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDL 63
+ + PD F T+I RA+ +++ ++ +SR + + +N+++ + D ++
Sbjct: 421 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 480
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A+ + ++M++ GV D T IL+ G C ++ + +L V++ + ++V YN +I
Sbjct: 481 AQDLF-QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 539
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H +CK KV A L + EP+ T++++I +C + + +A VL K G
Sbjct: 540 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 599
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
PD T ++ G + ++E++ E G G
Sbjct: 600 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 635
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 149/539 (27%), Positives = 238/539 (44%), Gaps = 75/539 (13%)
Query: 24 ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--------------DLARAF-Y 68
R +N +++ LV + +L +F ++D + D DL + F
Sbjct: 122 TRSVNRLLRT--LVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFEL 179
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+ G+ + Y +++ GLC R+ D KL M R + PN+V YNTLI CK
Sbjct: 180 MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCK 239
Query: 129 NGKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNAL-VLLEKSFSFGFVP--- 180
G + A M+E N VT++ L+ C + +A VLLE S GF+P
Sbjct: 240 VGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGS-GFLPGGF 298
Query: 181 -------------------------DVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
D T +L LC VGR+ A E+L + E G
Sbjct: 299 LSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTP 358
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+ G VK ++ME +G PN T+N +IS +CETG +D A
Sbjct: 359 SKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWV 418
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
M G+S TY++LI G G + L M+ K G K + Y S++ L
Sbjct: 419 RRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMD--KAGIKPNVISYGSLINCLC 476
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
++ + +A L M + P A ++ I C ++DA R FD+MI+ G +V
Sbjct: 477 KDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLV 536
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ LI+ + RV++A +L +M G G P T+N+++SG + N L+L ++
Sbjct: 537 TYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDK- 595
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
M+ +G P G + PLI A C K G + + +M+ ++PD +N ++ ++
Sbjct: 596 MKILGIK--PTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAE 651
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 190/413 (46%), Gaps = 38/413 (9%)
Query: 91 LCLTNRVGD-GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEP 145
LC +++ D L M+ G P++ N L+ +L + + ++ +D+ P
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ V + + A ++L L++ G P V VL LC V R+ DA ++
Sbjct: 156 DAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLF 215
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+E M ++ +PN TYN LI YC+ G ++ AL MK
Sbjct: 216 DE-------------------MIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQ 256
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
+ N VTY++L+ GLC GR+DD ++L M EGS + S ++ + D
Sbjct: 257 NVECNLVTYNSLLNGLCGSGRVDDAREVLLEM----EGSGFLPGGFLSFVFDDHSNGAGD 312
Query: 326 EALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ L K++ R +R+ IL G C G +E A+ +++E G P+ + Y+ L+
Sbjct: 313 DGLFDGKEI-----RIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILV 367
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+AYCQE V++A ++M G P TFNTV+S C G V A V R + +
Sbjct: 368 NAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVR---RMVEK 424
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G P Y+ LI +KG F L +M GI P+ +++ SL+ CL +
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCK 477
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 139/558 (24%), Positives = 238/558 (42%), Gaps = 91/558 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + V+ GL + R I D K D + + NM P+ +N+++D K I+ A F
Sbjct: 190 PSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGF 249
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI--------- 118
+++M V+ + TY L+ GLC + RV D ++L M+ G P +
Sbjct: 250 -KERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSN 308
Query: 119 -------------------YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
Y L++ LC+ G++ +A +++ + E P+ ++++IL+
Sbjct: 309 GAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVN 368
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA---VEILEESGEQ- 211
AYC+E ++ A++ E+ G P+ +T V+ C G V A V + E G
Sbjct: 369 AYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSP 428
Query: 212 ------------GRLGKVKGGCRFLKEMERKG-------------CL------------- 233
G+ G FL EM++ G CL
Sbjct: 429 TVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVL 488
Query: 234 ---------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
PN + YN+LI + C L A F++M GI VTY+TLI GL
Sbjct: 489 ADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRN 548
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR+ + M + +G + YNS++ G + + LE +M+ L +
Sbjct: 549 GRVKKAEDLFLQM--AGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVG 606
Query: 345 SLKILGF-CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ L + C V + F +M++ VP+ +Y+ +I++Y ++ V +A L ++M
Sbjct: 607 TFHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G T+N+++ R V LV+ DM+ +G +P Y+ LIK LC+
Sbjct: 667 DQGVDCDKVTYNSLILAYLRDRRVSEIKHLVD-DMKA--KGLVPKVDTYNILIKGLCDLK 723
Query: 464 GFQSASMLLVQMVGKGIL 481
F A +MV +G+L
Sbjct: 724 DFNGAYFWYREMVERGLL 741
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 210/473 (44%), Gaps = 41/473 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLARA 66
DE + ++ GL R + + KA +++++ +TPS +N +++ +E D+ +A
Sbjct: 324 DERTYCILLNGLCR---VGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG-DVKKA 379
Query: 67 FYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ M G++ + T+ ++ C T V + M +GV P YN+LI+
Sbjct: 380 ILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLING 439
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+ G R + +M+ +PN +++ LI CK+ L++A ++L G P+
Sbjct: 440 YGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPN 499
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
++E CS+ ++ DA RF EM + G + TYN
Sbjct: 500 AEIYNMLIEASCSLSKLKDAF-------------------RFFDEMIQSGIDATLVTYNT 540
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI+ G + A D+F M G + + +TY++LI G K L+L + K
Sbjct: 541 LINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQ---KCLELYDKMK 597
Query: 302 -EGSKGRISPYNSVLYGLYREN--QQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
G K + ++ ++Y +E D+ + + QM+ L P + I + DGNV
Sbjct: 598 ILGIKPTVGTFHPLIYACRKEGVVTMDKMFQEMLQMD-LVPDQFVYNEMIYSYAEDGNVM 656
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A QM+++G + V Y+ LI AY ++ RV E L+ +M G +P T+N ++
Sbjct: 657 KAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
GLC + A E + RG L LI L E+G + A ++
Sbjct: 717 KGLCDLKDFNGAYFWYRE---MVERGLLLNVSMCYQLISGLREEGMLREAQIV 766
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 128/349 (36%), Gaps = 89/349 (25%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P + ++I G G+ + D + + + P++ + S+++ L K+ +
Sbjct: 428 PTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIV 487
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ GV + Y +L++ C +++ D F+ M G+ V YNTLI+ L +
Sbjct: 488 LADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGR 547
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAY--------------------------- 157
NG+V +A L M P+ +T++ LI Y
Sbjct: 548 NGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGT 607
Query: 158 -------CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
C++E +V + ++ VPD +++ G VM A+ + ++ +
Sbjct: 608 FHPLIYACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVD 667
Query: 211 QG-------------------RLGKVK--------------------------------G 219
QG R+ ++K G
Sbjct: 668 QGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNG 727
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ +EM +G L NV LIS E G+L A V +++ I G++
Sbjct: 728 AYFWYREMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGLN 776
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 193/399 (48%), Gaps = 30/399 (7%)
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVN 165
V + +G N Y+TLIH L + K +L+ M + C + E +N
Sbjct: 82 VGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALLHQM--------TYETCKF-HENIFLN 132
Query: 166 ALVLLEKSFSFGFVPDVV-TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
+ KS V ++ I ++ S+ + + IL ES + K L
Sbjct: 133 LMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQKC-----LL 187
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW-NFVTYDTLIRGLCS 283
E PN +NIL+ +C++G L+SAL+V ++MK S+ N +TY TLI GLC
Sbjct: 188 YVNEHLKVRPNTCIFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCG 247
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--L 337
GR+ + +++ + M SK +I P Y+ ++ G + D A + ++ M
Sbjct: 248 NGRLKEAIELFEEM-----VSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGC 302
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + S+ + GFC +G +E+AK FD+M G P+ V Y LI+ +C R+ EA E
Sbjct: 303 DPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAME 362
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L+KEMT A TFN +L GLCR+G AL+++E G G Y ++
Sbjct: 363 LLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAY---EGVYLNKGSYRIVLN 419
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
LC+KG + + LL M+ +G +P Y T N LL+CL +
Sbjct: 420 FLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCE 458
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 202/436 (46%), Gaps = 66/436 (15%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRF-NMTPSLKIFNSILDVLVK-EDIDLARAFY 68
E+IF+ +++ ++ + V++ + PSLK ++ L++LV+ + IDLA+
Sbjct: 127 ENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILVESKQIDLAQK-- 184
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
CL L+V + V+PN+ I+N L+ CK
Sbjct: 185 -----------------------CL----------LYVNEHLKVRPNTCIFNILVKHHCK 211
Query: 129 NGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG-FVPDV 182
+G + A +M +M++ PN +T+S LI C L A+ L E+ S +PD
Sbjct: 212 SGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDA 271
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T + +++ C G+ A +I+E M GC PNV Y++L
Sbjct: 272 LTYSVLIKGFCHGGKADRARKIME-------------------FMRSNGCDPNVFNYSVL 312
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
++ +C+ G L+ A +VF++MK G+ + V Y TLI C GRID+ +++L+ M + K
Sbjct: 313 MNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMK- 371
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
K +N +L GL RE + DEAL L+ + E ++ + + C G +E +
Sbjct: 372 -CKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKS 430
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M+ G VP+ + L+ C+ V A + +T G+ P ++ ++
Sbjct: 431 CALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEY 490
Query: 421 LCRQGNVGTALKLVEE 436
+CR+ + +LV+E
Sbjct: 491 ICRERKLLFVFELVDE 506
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 35/321 (10%)
Query: 1 MPHSIQSPPDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE 59
M S +S P+ + T+I GL G R+ + ++VS+ + P ++ VL+K
Sbjct: 225 MKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYS----VLIKG 280
Query: 60 DIDLARAFYRKKMM----ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
+A +K+M ++G + + Y++LM G C R+ + ++ MKS G+KP+
Sbjct: 281 FCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPD 340
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLE 171
+V Y TLI+ C G++ A L+ +M E + VTF++L+ C+E AL +LE
Sbjct: 341 TVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLE 400
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
G + + VL LC G LE+S C L M +G
Sbjct: 401 NLAYEGVYLNKGSYRIVLNFLCQKGE-------LEKS------------CALLGLMLSRG 441
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
+P+ T N L+ CE G++D+A+ + G + ++ LI +C ++ L
Sbjct: 442 FVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKL---L 498
Query: 292 KILQLMEDSKEGSKGRISPYN 312
+ +L+++ E G+ ++
Sbjct: 499 FVFELVDELVEKESGKFHHFD 519
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 201/427 (47%), Gaps = 30/427 (7%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F ++M+ ++ T+ I++ LC + + M+ GVKPN V YNT+I+
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C GK A + M++ P+ T++ I CKE + A +L K G VP+
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ C+ G + A + EM +G + +V TYN+L
Sbjct: 323 VTYNALIDGCCNKGDLDKAFA-------------------YRDEMMNRGIVASVFTYNLL 363
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + ++ A D+ +M+ G+ + VTY+ I G C G L + M ++
Sbjct: 364 IHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM--VEK 421
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILGFCVDGNVEDA 360
+ + Y S++ + N+ EA E K+ E + P + + I G CV+GN++ A
Sbjct: 422 NIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRA 481
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ +M VP+ V ++ L+ YC+E +V EA +L+ EM G P ++NT++SG
Sbjct: 482 FQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISG 541
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
++G++ AL++ +E + G P Y+ LI+ + G A LL +M KGI
Sbjct: 542 YSKRGDMKDALEVFDE---MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGI 598
Query: 481 LPDYLTW 487
PD T+
Sbjct: 599 TPDDSTY 605
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 191/409 (46%), Gaps = 32/409 (7%)
Query: 39 RFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
+ N+ S+ FN ++++L +E + M GV+ + TY ++ G CL +
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFE 269
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
K+ MK + +KP+ YN+ I LCK ++ A ++ + E PN VT++ LI
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-- 212
C + +L A ++ + G V V T ++ L R+ +A ++++E E+G
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389
Query: 213 --------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
R G K EM K P V+TY LI + + + A +
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK 449
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSV 314
F +G+ + + ++ LI G C G ID ++L+ M+++K + P +N++
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK------VVPDEVTFNTL 503
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ G RE + +EA + L +M++ + P + + I G+ G+++DA FD+M+ G
Sbjct: 504 MQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGF 563
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
P ++ Y+ LI Y + A EL++EM G P ST+ V+ +
Sbjct: 564 DPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 207/461 (44%), Gaps = 36/461 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS I IL I + R ++ + +L+ C + + +
Sbjct: 114 PSFHILQPILHTTTPTVIFNELSLARNRLNVKTT----LVFDLLLSAYCQFRKPDEALEC 169
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND----VTFSILICAYCK 159
L++MK + P + N+L+ L K K+ A + +M + N VTF+I+I C+
Sbjct: 170 LNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCR 229
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
E A + +G P+VVT V+ C GK +
Sbjct: 230 EGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC-------------------LRGKFEA 270
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ K M+ K P+ TYN IS C+ ++ A V + G+ N VTY+ LI
Sbjct: 271 ASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALID 330
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C+ G +D M + G + YN +++ L+ E + +EA + +K+M + +
Sbjct: 331 GCCNKGDLDKAFAYRDEMMN--RGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V +++I G+C GN + A FD+M+E+ P V Y LI + + R+ EA E
Sbjct: 389 EPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLI 456
K+ G LP FN ++ G C GN+ A +L++E D + +P ++ L+
Sbjct: 449 KFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKV----VPDEVTFNTLM 504
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ C + + A LL +M +GI PD++++N+L+ S++
Sbjct: 505 QGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKR 545
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 183/391 (46%), Gaps = 30/391 (7%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEEN 162
M +K + V +N +I+ LC+ GK +A+ + ME +PN VT++ +I YC
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
A + + PD T + LC R+ +A +L C+
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVL---------------CK 312
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L+ G +PN TYN LI C G LD A ++M GI + TY+ LI L
Sbjct: 313 LLES----GLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALF 368
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRA 341
RI++ +++ M + +G + + YN + G R +AL +M EK
Sbjct: 369 LEKRIEEAEDMIKEMRE--KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPT 426
Query: 342 VDRSLKILG-FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V+ ++ F + +A+ F + I+EG +P++++++ LI +C + A +L+K
Sbjct: 427 VETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLK 486
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
EM +P TFNT++ G CR+ V A KL++E M+ RG P Y+ LI
Sbjct: 487 EMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDE-MKE--RGIKPDHISYNTLISGYS 543
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++G + A + +M+ G P LT+N+L+
Sbjct: 544 KRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PDE F T+++G R R + + K D + + P +N+++ K D+ A
Sbjct: 495 PDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEV 554
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M++ G TY L++G +LL M+S+G+ P+ Y +I ++
Sbjct: 555 F-DEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMK 613
Query: 128 KN 129
N
Sbjct: 614 TN 615
>gi|302810233|ref|XP_002986808.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
gi|300145462|gb|EFJ12138.1| hypothetical protein SELMODRAFT_41291 [Selaginella moellendorffii]
Length = 587
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 230/520 (44%), Gaps = 70/520 (13%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSR-FNMTPSLKIFNSILDVLVKE-DIDLARAFYRK 70
IF TVI+ GRA + V +S F+ TP + + +++ V++ D A + YR
Sbjct: 38 IFSTVIKCYGRAGDVKGAVATLKRMSDDFSCTPVARTYEALIRVVMDAGQCDTALSVYR- 96
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
D TY ++ G C + R+ ++ M+SRG + + + +N+L+ LCK G
Sbjct: 97 ------AMADRVTYNLVALGCCRSGRLDTCVEIYQEMRSRGFRVSHLAFNSLVCGLCKAG 150
Query: 131 KVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A ++ + VT S +I A C + AL L+ + P+VVT T
Sbjct: 151 RTDEAWDVLGKSRPSACADAVTLSTVIHALCSSD-CDRALELMRAMQAQRVPPNVVTYTS 209
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
V++ LC GR DA +L L++M+ GC PN TYN LI S C
Sbjct: 210 VIDGLCKAGR-RDAAMVL------------------LQQMQAAGCSPNTVTYNCLIHSLC 250
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG----------GRI---------- 287
+ G L+ A + M G + + +TL+ G+C G++
Sbjct: 251 KAGKLEDAFALLRSMPSKGCTPSINNKNTLVSGICKHAIMERQRREFGKLGQALFSEAMQ 310
Query: 288 ------DDGLKILQLMEDSKEGSKGRIS---PYNSVLYGLYRENQQDEALEYLKQMEKLF 338
+D L +L + GS G Y+ V++ L + ++ EA + M K
Sbjct: 311 ESCSVEEDTLALLYTCLEHMFGSNGDRPDKRTYSIVIHFLCKADKVLEAARVWRAMVKRL 370
Query: 339 PRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+A V + + G N+ +A R F ++ + P +V Y L+HAY + + +
Sbjct: 371 GQADAVTYNSFLYGLLKLNNLSEAARLFSEIDK----PTLVSYSLLVHAYFKAGDLSKVE 426
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
E+ + TG G P + +N VL GL L E + G P Y+ LI
Sbjct: 427 EVYQAATGQGLRPDLALYNIVLHGLSGAKQEAGVAHLWAE---MLNNGVSPSVATYTILI 483
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
ALC Q+A ++ +M G+G+LPD +T+N+LL CL +
Sbjct: 484 HALCRDNRLQAARQIIDKMKGQGVLPDAITYNTLLHCLCK 523
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 185/419 (44%), Gaps = 39/419 (9%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P++ + S++D L K A ++M A+G + TY L+ LC ++ D F L
Sbjct: 202 PNVVTYTSVIDGLCKAGRRDAAMVLLQQMQAAGCSPNTVTYNCLIHSLCKAGKLEDAFAL 261
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYC--KEE 161
L M S+G P+ NTL+ +CK+ + R R + + FS + C +E+
Sbjct: 262 LRSMPSKGCTPSINNKNTLVSGICKHAIMERQRREFGKLGQ---ALFSEAMQESCSVEED 318
Query: 162 NLVNALVLLEKSF-SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
L LE F S G PD T + V+ LC +V++A + + RLG+
Sbjct: 319 TLALLYTCLEHMFGSNGDRPDKRTYSIVIHFLCKADKVLEAARVWRAMVK--RLGQA--- 373
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ TYN + + L A +F++ ID + V+Y L+
Sbjct: 374 --------------DAVTYNSFLYGLLKLNNLSEAARLFSE--IDKPT--LVSYSLLVHA 415
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
G + ++ Q + +G + ++ YN VL+GL Q+ +M +
Sbjct: 416 YFKAGDLSKVEEVYQ--AATGQGLRPDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVS 473
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P ++ I C D ++ A++ D+M +G +P+ + Y+ L+H C+ E + EA L
Sbjct: 474 PSVATYTILIHALCRDNRLQAARQIIDKMKGQGVLPDAITYNTLLHCLCKNELLDEAHLL 533
Query: 399 MKEMTGH-GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
++EM H Y P +T+N V+ G+ Q ++G A ++ + +R G P Y +
Sbjct: 534 LREMKQHCSYTP--ATWNIVIDGILEQRDLGVAQRIFSQLIRD---GFFPAHLTYDAFV 587
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 161/394 (40%), Gaps = 70/394 (17%)
Query: 212 GRLGKVKGGCRFLKEMERK-GCLPNVDTYNILI-------------SSY----------- 246
GR G VKG LK M C P TY LI S Y
Sbjct: 47 GRAGDVKGAVATLKRMSDDFSCTPVARTYEALIRVVMDAGQCDTALSVYRAMADRVTYNL 106
Query: 247 -----CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
C +G LD+ ++++ +M+ G + + +++L+ GLC GR D+ +L S+
Sbjct: 107 VALGCCRSGRLDTCVEIYQEMRSRGFRVSHLAFNSLVCGLCKAGRTDEAWDVLG---KSR 163
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVED 359
+ ++V++ L + D ALE ++ Q +++ P V + I G C G +
Sbjct: 164 PSACADAVTLSTVIHALCSSDC-DRALELMRAMQAQRVPPNVVTYTSVIDGLCKAGRRDA 222
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A QM G PN V Y+CLIH+ C+ ++ +A L++ M G P + NT++S
Sbjct: 223 AMVLLQQMQAAGCSPNTVTYNCLIHSLCKAGKLEDAFALLRSMPSKGCTPSINNKNTLVS 282
Query: 420 GLCRQ----------GNVGTAL--------KLVEEDMRGI----------GRGSLPGSGH 451
G+C+ G +G AL VEED + G P
Sbjct: 283 GICKHAIMERQRREFGKLGQALFSEAMQESCSVEEDTLALLYTCLEHMFGSNGDRPDKRT 342
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI------CLSQQTTWLLLLL 505
YS +I LC+ A+ + MV + D +T+NS L LS+ +
Sbjct: 343 YSIVIHFLCKADKVLEAARVWRAMVKRLGQADAVTYNSFLYGLLKLNNLSEAARLFSEID 402
Query: 506 LNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAG 539
+VS+ ++VH K+ + A G G
Sbjct: 403 KPTLVSYSLLVHAYFKAGDLSKVEEVYQAATGQG 436
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P L ++N +L L + A +M+ +GV TY IL+ LC NR+
Sbjct: 437 LRPDLALYNIVLHGLSGAKQEAGVAHLWAEMLNNGVSPSVATYTILIHALCRDNRLQAAR 496
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP---NDVTFSILICAYC 158
+++ MK +GV P+++ YNTL+H LCKN + A L+ +M++ T++I+I
Sbjct: 497 QIIDKMKGQGVLPDAITYNTLLHCLCKNELLDEAHLLLREMKQHCSYTPATWNIVIDGIL 556
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVT 184
++ +L A + + GF P +T
Sbjct: 557 EQRDLGVAQRIFSQLIRDGFFPAHLT 582
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 215/437 (49%), Gaps = 36/437 (8%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L++ C V + + ++MK +G P + N ++ L + ++ A +DM
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ N TF+I+I CKE L A L FG P +VT +++ GR+
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI- 276
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
E RL + EM+ KG P++ TYN ++S C G A +V
Sbjct: 277 ----------EGARL--------IISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVL 315
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+MK G+ + V+Y+ LIRG + G ++ M K+G YN++++GL+
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM--VKQGMVPTFYTYNTLIHGLF 373
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
EN+ + A ++++ + + +V ++ I G+C G+ + A D+M+ +G P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE- 436
Y LI+ C++ + REA EL +++ G G P NT++ G C GN+ A L++E
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
DM I P Y+ L++ LC +G F+ A L+ +M +GI PD++++N+L+ S+
Sbjct: 494 DMMSIN----PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 497 Q-TTWLLLLLLNEMVSF 512
+ T ++ +EM+S
Sbjct: 550 KGDTKHAFMVRDEMLSL 566
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 232/504 (46%), Gaps = 61/504 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
+F ++R + RM+++ ++ L+ P + N IL +L + + I+ A FY
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY-AD 215
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M ++ + YT+ I++ LC ++ L +M+ G+KP V YNTL+ G+
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ AR ++S+M+ S GF PD+ T +L
Sbjct: 276 IEGARLIISEMK-------------------------------SKGFQPDMQTYNPILSW 304
Query: 192 LCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPN 235
+C+ GR A E+L E E G + G ++ + EM ++G +P
Sbjct: 305 MCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TYN LI +++A + +++ GI + VTY+ LI G C G D K
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG---DAKKAFA 418
Query: 296 LMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
L ++ +G + Y S++Y L R+N+ EA E +++ + + P V + + G C
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
GN++ A +M P+ V Y+CL+ C E + EA ELM EM G P
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
++NT++SG ++G+ A +V ++M +G P Y+ L+K L + + A LL
Sbjct: 539 SYNTLISGYSKKGDTKHAF-MVRDEMLSLGFN--PTLLTYNALLKGLSKNQEGELAEELL 595
Query: 473 VQMVGKGILPDYLTWNSLLICLSQ 496
+M +GI+P+ ++ S++ +S
Sbjct: 596 REMKSEGIVPNDSSFCSVIEAMSN 619
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 23/277 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +IRG + D + + M P+ +N+++ L E+ A
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++ G+ D TY IL+ G C F L M + G++P Y +LI+ LC+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K A L + +P+ V + L+ +C N+ A LL++ PD VT
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC G+ +A E+ + EM+R+G P+ +YN LIS
Sbjct: 505 YNCLMRGLCGEGKFEEAREL-------------------MGEMKRRGIKPDHISYNTLIS 545
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
Y + G A V ++M G + +TY+ L++GL
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+ +D L+R C +D+ ++ LM++ +G + N +L L R N+ + A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKE--KGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 332 KQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
M ++ ++ + I+ C +G ++ AK M G P +V Y+ L+ +
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R+ A ++ EM G+ P T+N +LS +C +G L+ +M+ IG +P S
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR----EMKEIGL--VPDS 327
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI+ G + A +MV +G++P + T+N+L+
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P + + ++I L R + + + V M P L + N+++D ++ RAF
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG-NMDRAFS 488
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M + DD TY LM+GLC + + +L+ MK RG+KP+ + YNTLI
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G A + +M P +T++ L+ K + A LL + S G VP+
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608
Query: 184 TITKVLELLCSV 195
+ V+E + ++
Sbjct: 609 SFCSVIEAMSNL 620
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI---EEGGVP 374
LYR + Q + L + P+ V + LK + V + FD+++ +
Sbjct: 97 LYRLDFQTQCLAIAVISKLSSPKPVTQLLKEV---VTSRKNSIRNLFDELVLAHDRLETK 153
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ +++D L+ CQ V EA E M G+ P T N +L+ L R + A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ R + ++ ++ +I LC++G + A L M GI P +T+N+L+
Sbjct: 214 ADMYRMEIKSNVYT---FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV 267
>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 594
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 150/525 (28%), Positives = 232/525 (44%), Gaps = 50/525 (9%)
Query: 2 PHSIQSPP-----DESIFITVIRGLGRARMINDVVKATDLVSR---FNMTPSLKIFNSIL 53
P S PP ++ + IR L A D V A D R P ++ FN +
Sbjct: 26 PFSTSPPPISDAAHRTLLLNSIRTLETA----DAVVAVDFFHRMLTLTPFPCIQDFNLLF 81
Query: 54 DVLVKEDIDLARAFYRKKMMASGVQG--DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG 111
++ K A A K++ S G D T I + LC + GF +L +M G
Sbjct: 82 GLVAKSQ-HYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIG 140
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNAL 167
++P V NT+++ LC G V A L+ ME N T+ L+ CK + AL
Sbjct: 141 LEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGAL 200
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE--------------QGR 213
L+K P+VV +L+ LC G V +A+ +L E G QG
Sbjct: 201 ECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGL 260
Query: 214 LGKVKG---GCRFLKEM-ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
G+ G G EM KG +P+V T++IL+ +C+ G+L A V M G+
Sbjct: 261 CGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEP 320
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N VTY++LI G C ++++ +++ LM EG + +NS+++G + + D+A+
Sbjct: 321 NVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMS 380
Query: 330 YLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV----VIYDCLI 383
L +M + L P + I GFC A+ F M E G VPN+ V+ D L+
Sbjct: 381 LLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLL 440
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ EA L + M G +N +L G+C+ G + A KL+ + +
Sbjct: 441 KCWLDS----EAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLV---K 493
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
G S Y+ +IK LC +G A LL +M G P+ ++N
Sbjct: 494 GLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYN 538
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 202/436 (46%), Gaps = 48/436 (11%)
Query: 36 LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR-KKMMASGVQGDDYTYAILMKGLCLT 94
L+++ + P+L N+I++ L E D+ A + +KM G + TY L+ GLC
Sbjct: 135 LMTKIGLEPTLVTLNTIVNGLCIEG-DVNHALWLVEKMENLGYHCNARTYGALVNGLCKI 193
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTF 150
+ L M R + PN V+YN ++ LCK G VG A L+ +M EPN VT+
Sbjct: 194 GDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTY 253
Query: 151 SILICAYCKE-------ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+ LI C E L N +V EK G VPDV T + +++ C G ++ A
Sbjct: 254 NCLIQGLCGEFGGWREGVGLFNEMVA-EK----GIVPDVQTFSILVDGFCKEGLLLRAES 308
Query: 204 ILEESGEQGRLGK----------VKGGC---------RFLKEMERKG--CLPNVDTYNIL 242
++ G R+G + G C R M R+G CLP+V T+N L
Sbjct: 309 VV---GFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSL 365
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I +C+ +D A+ + ++M G+ + T+ +LI G C + L +L KE
Sbjct: 366 IHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFC---EVKKPLAARELFFTMKE 422
Query: 303 -GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G + VL GL + EA+ + M K L V ++ + G C G + D
Sbjct: 423 HGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLND 482
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A++ ++ +G + Y+ +I C+E + +A EL+++M +G P ++N +
Sbjct: 483 ARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQ 542
Query: 420 GLCRQGNVGTALKLVE 435
GL R+ ++ + K ++
Sbjct: 543 GLLRKYDIARSRKYLQ 558
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 154/347 (44%), Gaps = 27/347 (7%)
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFG-FVPDVVTITKVLELLCSVGRVMDAVEILEES 208
F++L K ++ A+ L++ S G DV T+ + LC
Sbjct: 77 FNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLC--------------- 121
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ K G L M + G P + T N +++ C G ++ AL + M+ G
Sbjct: 122 ----HMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYH 177
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
N TY L+ GLC G L+ L+ M G + YN++L GL + EAL
Sbjct: 178 CNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPN--VVVYNAILDGLCKRGLVGEAL 235
Query: 329 EYLKQME--KLFPRAVDRSLKILGFCVD-GNVEDAKRCFDQMIEEGG-VPNVVIYDCLIH 384
L +M + P V + I G C + G + F++M+ E G VP+V + L+
Sbjct: 236 GLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVD 295
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+C+E + A ++ M G P T+N++++G C + + A+++ +R G G
Sbjct: 296 GFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVRE-GEG 354
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LP ++ LI C+ A LL +MVGKG+ PD TW SL+
Sbjct: 355 CLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLI 401
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 149/322 (46%), Gaps = 25/322 (7%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLT 94
++V+ + P ++ F+ ++D KE + L M+ GV+ + TY L+ G CL
Sbjct: 276 EMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLR 335
Query: 95 NRVGDGFKLLHVM--KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
+++ + ++ +M + G P+ V +N+LIH CK +V +A SL+S+M +P+
Sbjct: 336 SQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVF 395
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ LI +C+ + + A L G VP++ T VL+ L +AV +
Sbjct: 396 TWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAM 455
Query: 209 GEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+ G ++GK+ + L + KG + TYNI+I C G+L
Sbjct: 456 MKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLL 515
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D A ++ MK +G N +Y+ ++GL I K LQ+M+D +
Sbjct: 516 DDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTA--- 572
Query: 313 SVLYGLYRENQQDEALEYLKQM 334
+L N++D++ + Q+
Sbjct: 573 ELLIRFLSANEEDKSFKEFPQI 594
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ V+ GL + + ++ V + + + + I+N +LD + K ++ AR
Sbjct: 427 PNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKL 486
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ G++ D YTY I++KGLC + D +LL MK G PN YN + L
Sbjct: 487 L-SCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLL 545
Query: 128 KNGKVGRAR---SLMSDMEEPNDVTFSILICAY 157
+ + R+R +M D P D T + L+ +
Sbjct: 546 RKYDIARSRKYLQIMKDKGFPVDATTAELLIRF 578
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 182/373 (48%), Gaps = 11/373 (2%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++MM+ G D TY+ ++ LC ++V + F L MKS V P+ Y LI S CK
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR +M PN VT++ LI AY K + +A L E S G +P+VVT
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ C G++ A +I + V + K + PN+ TY L+
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVD---MYFKIDDGNIRDPNIFTYGALVDG 645
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ + A D+ + M ++G N + YD LI G C G++D+ + M S+ G
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM--SERGYG 703
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+S++ L+++ + D AL+ L +M P + + I G C G ++A R
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y +I + + +V + ELM++M G P T+ +++ C
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823
Query: 424 QGNVGTALKLVEE 436
G + A +L++E
Sbjct: 824 AGLLDDAHQLLDE 836
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 214/505 (42%), Gaps = 59/505 (11%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
+IR R + N ++ + PS +N+++ V ++ D +D A +R+ M S
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE-MSDS 261
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G D YT + LC R + L+ + K ++VIY +I LC+ A
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+S M PN VT+ IL+C ++ L +L + G P ++
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC---- 247
C R G + LK+M GC P YNILI C
Sbjct: 379 YC-------------------RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 248 --ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
VL+ A + +M + N V L R LC G+ + I++ M SK
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM-----SK 474
Query: 306 GRI---SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G I S Y+ V+ L ++ D A ++M+ + P ++ I FC G ++ A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
++ FD+M+ +G PNVV Y LIHAY + ++ A+EL + M G +P T+ ++ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 421 LCRQGNVGTALKLVEEDMRG------------IGRGSL--PGSGHYSPLIKALCEKGGFQ 466
C+ G + A ++ MRG I G++ P Y L+ LC+ +
Sbjct: 595 HCKSGQIEKACQIYAR-MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A LL M +G P+++ +++L+
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALI 678
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/391 (29%), Positives = 179/391 (45%), Gaps = 35/391 (8%)
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
+TY L+ GLC ++V + LL VM G +PN ++Y+ LI CK GK+ A+ + +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M E PN T+S LI K++ L AL +L + P+V+ T++++ LC VG+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+A R + ME KGC PNV TY +I + + G +D L+
Sbjct: 757 TDEAY-------------------RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLE 797
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ M G + NFVTY LI C+ G +DD ++L M+ + ++ Y V+ G
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK--HMAGYRKVIEG 855
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQM--IEEGGV 373
RE +L L ++ + + + +IL FC G +E A +M
Sbjct: 856 FNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSA 913
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
+ +Y LI + +V +A EL +M G +P S F ++ GL R AL+L
Sbjct: 914 ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
Query: 434 VE---EDMRGIGRGSLPGSGH-YSPLIKALC 460
+ + M R GS H Y L LC
Sbjct: 974 SDCICQMMVDFVREGFLGSSHDYEFLNWTLC 1004
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/530 (22%), Positives = 227/530 (42%), Gaps = 48/530 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
PD S + VI L A +++ + + ++ P + + ++D K + AR +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G + TY L+ ++ +L +M S G PN V Y LI C
Sbjct: 538 F-DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHC 596
Query: 128 KNGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNAL 167
K+G++ +A + + M +PN T+ L+ CK + A
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
LL+ G P+ + +++ C VG++ +A + +M
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV-------------------FTKM 697
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G PNV TY+ LI + LD AL V + M + + N + Y +I GLC G+
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D+ +++ +ME+ +G + Y +++ G + + D+ LE ++QM + P V
Sbjct: 758 DEAYRLMSMMEE--KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I C G ++DA + D+M + ++ Y +I + +E + L+ E+ +
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAEN 873
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+PI + ++ C+ G + AL+L +E M S YS LI++L
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKE-MSSCTSYSAADKDLYSSLIESLSLASKV 932
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMV 515
A L M+ +G +P+ + L+ L + W L L++ + +MV
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMMV 982
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 40/310 (12%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N+LI C G+ + AL+ +K G + +TY+ L+R R+D + + M D
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 300 S------------------------------KEGSKGRISPYNSVLYGLYRENQQDEALE 329
S KE K Y ++ GL + +EA++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 330 YLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+L +M P V + + G + KR MI EG P+ I++ LIHAYC
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR---- 443
+ A +L+K+M G P +N ++ G+C + +L ++E + G
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDA 439
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL--LICLSQQTTWL 501
+ + S L + LC G F+ A ++ +M+ KG +PD T++ + L+C + +
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVD-N 498
Query: 502 LLLLLNEMVS 511
LL EM S
Sbjct: 499 AFLLFEEMKS 508
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/539 (24%), Positives = 224/539 (41%), Gaps = 98/539 (18%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKK 71
+F T++R L R + D + D V + P + ++N +D K ++D+A F+
Sbjct: 82 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFF--- 138
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
H +K++G+KP+ V Y ++I LCK G+
Sbjct: 139 ---------------------------------HELKAQGLKPDDVSYTSMIWVLCKAGR 165
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+G A L + ME P ++ +I Y +A LLE+ G +P VV+
Sbjct: 166 LGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNS 225
Query: 188 VLELLCSVGRVMDAV---EILEESGEQGRL------------GKVKGGCRFLKEMERKGC 232
+L L +V +A+ E++++ E G+V+ R L EME
Sbjct: 226 ILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASL 285
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PN+ T NI++ C+ L+ A +F G + + VTY +LI GL G++D+ +
Sbjct: 286 FPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYR 345
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFC 352
+ + M D+ G Y S++ + ++++ + K+ L R L +L
Sbjct: 346 LFEKMLDA--GHNANPVVYTSLIRNFFIHGRKEDGHKVFKE---LIRRGCKPDLTLLNTY 400
Query: 353 VD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+D G VE + F+ + G +P+V Y LIH + + RE S + M G+
Sbjct: 401 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 460
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH---------------- 451
A +N V+ G C+ G V A +++EE + ++ G
Sbjct: 461 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 520
Query: 452 ----------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
YS LI + G A ++L +M+ KG+ P+ TWNSLL L
Sbjct: 521 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 579
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 131/539 (24%), Positives = 246/539 (45%), Gaps = 38/539 (7%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLA 64
+S P + T+I G G A D K + + PS+ FNSIL L K +D A
Sbjct: 180 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 239
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + ++M + + TY I++ LCL RV + +++L M+ + PN + N ++
Sbjct: 240 LSLF--EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 297
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK K+ A + + P+ VT+ LI K+ + A L EK G
Sbjct: 298 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 357
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ V T ++ GR D ++ +E +G + G+V+ G
Sbjct: 358 NPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 417
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+++ G LP+V +Y+ILI + G ++F+ MK G + + Y+ ++ G C
Sbjct: 418 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 477
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G++ +IL+ M++ + + ++ Y +++ GL + ++ DEA ++ + + V
Sbjct: 478 GKVHKAYEILEEMKE--KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
S I GF G +++A ++M+++G PNV ++ L+ A + E + EA + M
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P T++ +++GLCR A + +DM+ +G +P Y+ +I L +
Sbjct: 596 KEMKCPPNTYTYSILINGLCRVQKYNKAF-VFWQDMQ--KQGLVPNVVTYTTMISGLAKV 652
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSA 521
G A L + G +PD ++N+L+ +S M ++ V++LS+
Sbjct: 653 GNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN--------RAMEAYQTTVYQLSS 703
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 187/415 (45%), Gaps = 29/415 (6%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE 144
A L L R+ D + VM+ +P Y LI +L + + RA L+ M+E
Sbjct: 14 ADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQE 73
Query: 145 PNDVT----FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
F+ L+ A +E + +AL L+++ PD+V ++
Sbjct: 74 VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCF-------- 125
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
G+ G V C+F E++ +G P+ +Y +I C+ G L A ++F
Sbjct: 126 -----------GKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 174
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M+ + Y+T+I G S GR +D K+L+ + + G + +NS+L L +
Sbjct: 175 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRE--RGCIPSVVSFNSILTCLGK 232
Query: 321 ENQQDEALEYLKQMEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ + DEAL + M+K P + ++ I C+ G VE+A R D+M PN++
Sbjct: 233 KRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTV 292
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
+ ++ C+ ++ EA ++ + + G P T+ +++ GL ++G V A +L E+ M
Sbjct: 293 NIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEK-ML 351
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
G + P Y+ LI+ G + + +++ +G PD N+ + C+
Sbjct: 352 DAGHNANPVV--YTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCV 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
L L R+DD + + +M K + S Y ++ L + + ALE L+QM++
Sbjct: 16 LAAALVRARRLDDAVLAVAVMRRLK--FRPAFSAYTVLIGALAEARRPERALELLRQMQE 73
Query: 337 L-FPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ + V ++ +G V DA D++ P++V+Y+ I + + V
Sbjct: 74 VGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDM 133
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A + E+ G P ++ +++ LC+ G +G A +L + S+P + Y+
Sbjct: 134 ACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME---AERSVPCAYAYNT 190
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+I G F+ A LL ++ +G +P +++NS+L CL ++
Sbjct: 191 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 233
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 182/373 (48%), Gaps = 11/373 (2%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++MM+ G D TY+ ++ LC ++V + F L MKS V P+ Y LI S CK
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR +M PN VT++ LI AY K + +A L E S G +P+VVT
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ C G++ A +I + V + K + PN+ TY L+
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVD---MYFKIDDGNIRDPNIFTYGALVDG 645
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ + A D+ + M ++G N + YD LI G C G++D+ + M S+ G
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM--SERGYG 703
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+S++ L+++ + D AL+ L +M P + + I G C G ++A R
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y +I + + +V + ELM++M G P T+ +++ C
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823
Query: 424 QGNVGTALKLVEE 436
G + A +L++E
Sbjct: 824 AGLLDDAHQLLDE 836
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 215/468 (45%), Gaps = 49/468 (10%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M +S + TY IL+ G ++G ++L +M + G P+ I+N+LIH+ C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL--VNALVLLEKSF----SFG 177
++G A L+ M +P V ++ILI C E L ++ L L EK++
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH 440
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGC 221
V + V ++ + LC G+ A I+ E +G + KV
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+EM+ +P+V TY ILI S+C+ G+L A F++M DG + N VTY LI
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME------ 335
++ ++ ++M EG + Y +++ G + Q ++A + +M
Sbjct: 561 LKARKMSSANELFEMM--LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618
Query: 336 --KLFPRAVDRSLK----------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
++ + D +++ + G C V++A+ D M EG PN ++YD LI
Sbjct: 619 DVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALI 678
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+C+ ++ EA + +M+ GY P T+++++ L + + ALK++ R +
Sbjct: 679 DGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLS---RMLEN 735
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I LC+ G A L+ M KG P+ +T+ +++
Sbjct: 736 SCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMI 783
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/506 (25%), Positives = 214/506 (42%), Gaps = 59/506 (11%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMA 74
+IR R + N ++ + PS +N+++ V ++ D +D A +R+ M
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE-MSD 260
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
SG D YT + LC R + L+ + K ++VIY +I LC+
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEE 317
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A +S M PN VT+ IL+C ++ L +L + G P ++
Sbjct: 318 AMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIH 377
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC--- 247
C R G + LK+M GC P YNILI C
Sbjct: 378 AYC-------------------RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNE 418
Query: 248 ---ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
VL+ A + +M + N V L R LC G+ + I++ M S
Sbjct: 419 KLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM-----S 473
Query: 305 KGRI---SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
KG I S Y+ V+ L ++ D A ++M+ + P ++ I FC G ++
Sbjct: 474 KGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQ 533
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A++ FD+M+ +G PNVV Y LIHAY + ++ A+EL + M G +P T+ ++
Sbjct: 534 ARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALID 593
Query: 420 GLCRQGNVGTALKLVEEDMRG------------IGRGSL--PGSGHYSPLIKALCEKGGF 465
G C+ G + A ++ MRG I G++ P Y L+ LC+
Sbjct: 594 GHCKSGQIEKACQIYAR-MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
+ A LL M +G P+++ +++L+
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALI 678
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 168/360 (46%), Gaps = 31/360 (8%)
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
+TY L+ GLC ++V + LL VM G +PN ++Y+ LI CK GK+ A+ + +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M E PN T+S LI K++ L AL +L + P+V+ T++++ LC VG+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+A R + ME KGC PNV TY +I + + G +D L+
Sbjct: 757 TDEAY-------------------RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLE 797
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ M G + NFVTY LI C+ G +DD ++L M+ + ++ Y V+ G
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK--HMAGYRKVIEG 855
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQM--IEEGGV 373
RE +L L ++ + + + +IL FC G +E A +M
Sbjct: 856 FNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSA 913
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
+ +Y LI + +V +A EL +M G +P S F ++ GL R AL+L
Sbjct: 914 ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/525 (22%), Positives = 225/525 (42%), Gaps = 48/525 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
PD S + VI L A +++ + + ++ P + + ++D K + AR +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G + TY L+ ++ +L +M S G PN V Y LI C
Sbjct: 538 F-DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHC 596
Query: 128 KNGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNAL 167
K+G++ +A + + M +PN T+ L+ CK + A
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
LL+ G P+ + +++ C VG++ +A + +M
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV-------------------FTKM 697
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G PNV TY+ LI + LD AL V + M + + N + Y +I GLC G+
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D+ +++ +ME+ +G + Y +++ G + + D+ LE ++QM + P V
Sbjct: 758 DEAYRLMSMMEE--KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I C G ++DA + D+M + ++ Y +I + +E + + L+ E+ +
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGLLDEIAEN 873
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+PI + ++ C+ G + AL+L +E M S YS LI++L
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALELHKE-MSSCTSYSAADKDLYSSLIESLSLASKV 932
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
A L M+ +G +P+ + L+ L + W L L++ +
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCI 977
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N+LI C G+ + AL+ +K G + +TY+ L+R R+D + + M D
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 300 S------------------------------KEGSKGRISPYNSVLYGLYRENQQDEALE 329
S KE K Y ++ GL + +EA++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 330 YLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+L +M P V + + G + KR MI EG P+ I++ LIHAYC
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR---- 443
+ A +L+K+M G P +N ++ G+C + +L ++E + G
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDA 439
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL--LICLSQQTTWL 501
+ + S L + LC G F+ A ++ +M+ KG +PD T++ + L+C + +
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499
Query: 502 LLLL 505
LL
Sbjct: 500 FLLF 503
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 215/448 (47%), Gaps = 48/448 (10%)
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKS 173
+N L+ +L K + SL + ++ +P+ +TFSILI A+ + + A LL
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
GF DV +T +++ LC GRV++AV +L E ++G ++GK
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ + +M++ PN+ YN +I C+ G++D A + +M +GI + +Y+++
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQ 333
I G CS GR +K+L M +G++ P +N ++ GL + + EA +
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMV-----VRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAV 306
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M K P V + + G+C+ G+V +AK+ FD+M+E +PNV+ Y LI+ YC+
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
V EA L+ EM +P T+N +L GL + G LVE MR G+ +
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEA-MRASGQPA--DLIT 423
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM 509
Y+ L+ + F A L ++ GI P+ T+N LL +C S + +
Sbjct: 424 YNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYA-------- 475
Query: 510 VSFVMVVHELSAKEKRCKLRSLNHLAHG 537
+ LSAK + +R+ N + HG
Sbjct: 476 ---KEIFQLLSAKGCQPNIRTYNIMIHG 500
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 223/487 (45%), Gaps = 34/487 (6%)
Query: 14 FITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKK 71
F ++ L + + N VV T L S+ + PSL F+ +++ + + AF
Sbjct: 72 FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLG-QMGFAFSLLGN 130
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ G Q D LMKGLCL RV + LLH RG + + V Y T+I+ LCK GK
Sbjct: 131 ILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGK 190
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A + M++ PN + ++ +I CK+ + A L + G DV +
Sbjct: 191 TRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNS 250
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ CSVGR AV++L+E +G++ P+V T+NILI C
Sbjct: 251 MIHGFCSVGRFQAAVKLLDEMVVRGKV------------------YPDVYTFNILIDGLC 292
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G + A +V M G + V+Y+ L+ G C G + + ++ M + +
Sbjct: 293 KLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVE--RTALPN 350
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ Y +++ G + DEA+ L +M + L P V + + G G +
Sbjct: 351 VISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVE 410
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M G +++ Y+ L+ Y + E+ +A L + + G P T+N +L GLC+ G
Sbjct: 411 AMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSG 470
Query: 426 NVGTALKLVEEDMRGI-GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
LK +E + + +G P Y+ +I LC++G A LL +MV LP+Y
Sbjct: 471 R----LKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNY 526
Query: 485 LTWNSLL 491
+T+++++
Sbjct: 527 ITFDTIV 533
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 168/368 (45%), Gaps = 67/368 (18%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--------- 60
DE + T+I GL + D ++ + + + P+L ++N+++D L K+
Sbjct: 174 DEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLC 233
Query: 61 -------IDLARAFYRK-------------------KMMASG-VQGDDYTYAILMKGLCL 93
I+L Y +M+ G V D YT+ IL+ GLC
Sbjct: 234 TEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK 293
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
RV + + ++ VM RG KP+ V YN L++ C +G VG A+ + M E PN ++
Sbjct: 294 LGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVIS 353
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM---DAVEILE 206
+ LI YCK + A+VLL + + VPD VT +L+ L GR + D VE +
Sbjct: 354 YCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMR 413
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
SG+ L TYN+L+ Y + D AL +F + G
Sbjct: 414 ASGQPADL----------------------ITYNVLLDDYFKHEKFDKALALFQHIIEIG 451
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
IS N TY+ L+ GLC GR+ +I QL+ S +G + I YN +++GL +E DE
Sbjct: 452 ISPNIRTYNILLDGLCKSGRLKYAKEIFQLL--SAKGCQPNIRTYNIMIHGLCKEGFLDE 509
Query: 327 ALEYLKQM 334
A L +M
Sbjct: 510 AEALLYKM 517
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 136/556 (24%), Positives = 244/556 (43%), Gaps = 64/556 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+ ++F +IR R RM+ D V+ L+ + PS+ N +L LVKE +D+ +F+
Sbjct: 104 NPAVFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFF 163
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+A G+ D T+ IL+ LC + + LL M+ GV P +V YNTL++ CK
Sbjct: 164 -KGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCK 222
Query: 129 NGKVGRARSLMS---------------------------------------DMEEPNDVT 149
G+ A L+ +M PN++T
Sbjct: 223 KGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEIT 282
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ LI + +E + A + ++ F +P+ +T ++ C+ G + +A+ +++
Sbjct: 283 YNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMV 342
Query: 210 EQG-RLGKVKGGC---------------RFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
G R +V G L+ M G + +Y +I C+ G+L+
Sbjct: 343 SHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLE 402
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A+ + +DM ++ + VT+ LI G G+I++ +I+ M + G + Y++
Sbjct: 403 EAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGIL--YST 460
Query: 314 VLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEG 371
++Y + EAL M A + +L FC G +E+A+ + M G
Sbjct: 461 LIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMG 520
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PN V +DC+I+ Y +A + +M G+ P T+ +L GLC G++ AL
Sbjct: 521 LDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEAL 580
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K +R I + ++ + + C G A L+ +MV LPD T+ +L+
Sbjct: 581 KFFHR-LRCIPNAV--DNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLI 637
Query: 492 ICLSQQTTWLLLLLLN 507
L ++ + LLL+
Sbjct: 638 AGLCKKGKIVAALLLS 653
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 224/517 (43%), Gaps = 32/517 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E + T+I G R I K D +S FN+ P+ +N+++ ++ A
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTG-NIGEALR 336
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M S G++ ++ TY L+ GL G +L M+ GV+ + + Y +I LC
Sbjct: 337 LMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLC 396
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNG + A L+ DM + P+ VTFS+LI + + + NA ++ K + G VP+ +
Sbjct: 397 KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGI 456
Query: 184 TITKVLELLCSVG---RVMDAVEILEESGEQG-------------RLGKVKGGCRFLKEM 227
+ ++ C +G ++A ++ SG R GK++ F+ M
Sbjct: 457 LYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHM 516
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R G PN T++ +I+ Y +G A VF+ M G + TY L++GLC GG I
Sbjct: 517 SRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHI 576
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
++ LK + I +N+ L R +A+ + +M P +
Sbjct: 577 NEALKFFHRLRCIPNAVDNVI--FNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTG 404
I G C G + A + IE+G + PN +Y L+ + R A + +EM
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLN 694
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS-GHYSPLIKALCEKG 463
P FN ++ R+G V + + + +L + Y+ L+ ++
Sbjct: 695 KDVEPDTVAFNVIIDQYSRKGKTSK----VNDILSTMKSKNLCFNLATYNILLHGYAKRH 750
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
ML M+ G LPD +W+SL++ Q ++
Sbjct: 751 AMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSF 787
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 214/465 (46%), Gaps = 37/465 (7%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTN 95
+SR + P+ F+ I++ D +AF KM + G +TY L+KGLC+
Sbjct: 516 MSRMGLDPNSVTFDCIINGYGNSG-DALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFS 151
+ + K H ++ ++VI+NT + S C++G + A +L+++M P++ T++
Sbjct: 575 HINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYT 634
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILEESGE 210
LI CK+ +V AL+L K+ G + P+ T +++ L G A+ I EE
Sbjct: 635 NLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEE--- 691
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M K P+ +N++I Y G D+ + MK + +N
Sbjct: 692 ----------------MLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFN 735
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALE 329
TY+ L+ G + + L +D + G ++S++ G + D A++
Sbjct: 736 LATYNILLHGYAKRHAMA---RCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIK 792
Query: 330 YLKQMEKLFPRAVDR---SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L+ + L +DR ++ I FC ++ A QM + +PNV Y+ L +
Sbjct: 793 ILRWIT-LEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGL 851
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ +A +++ + G +P + T+++G+CR GN+ A+KL +++M+ +G S
Sbjct: 852 IRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKL-QDEMKTLGISS- 909
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ S +++ L ++A +L M+ I+P T+ +L+
Sbjct: 910 -HNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLM 953
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 188/417 (45%), Gaps = 25/417 (5%)
Query: 9 PDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + +I GL + +++ ++ + + + ++P+ ++ S++D L+K A +
Sbjct: 628 PDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALY 687
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ V+ D + +++ + +L MKS+ + N YN L+H
Sbjct: 688 IFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYA 747
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + R L DM P+ ++ LI YC+ ++ A+ +L G V D
Sbjct: 748 KRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRF 807
Query: 184 TITKVLELLCSVGRVMDAVEILEESGE--------------QG--RLGKVKGGCRFLKEM 227
T ++ C + A E++++ + G R R L+ +
Sbjct: 808 TFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVL 867
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G +P Y LI+ C G + A+ + ++MK GIS + V ++RGL + +I
Sbjct: 868 LESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKI 927
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRS 345
++ + +L LM + + ++ + ++++ +E +ALE ME + V +
Sbjct: 928 ENAIWVLDLMLEMQIIPT--VATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYN 985
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G C +G++E A + +++M + PN IY LI ++C E+ +L++++
Sbjct: 986 VLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDI 1042
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 127/296 (42%), Gaps = 25/296 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD+ + ++I G +++ + +K ++ FN ++ + + ++ +AF
Sbjct: 769 PDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERN-EMKKAFE 827
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M V + TY L GL T+ ++L V+ G P + Y TLI+ +C
Sbjct: 828 LVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMC 887
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + A L +M+ ++V S ++ + + NA+ +L+ +P V
Sbjct: 888 RVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVA 947
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ + C V A+E+ ME +V YN+LI
Sbjct: 948 TFTTLMHVYCKEANVAKALELRSI-------------------MEHCHVKLDVVAYNVLI 988
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
S C G +++A ++ +MK + N Y LI C+G + K+L+ ++D
Sbjct: 989 SGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQD 1044
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 198/433 (45%), Gaps = 29/433 (6%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+ ++ +TY +L + LC ++ MKS G+ PNS + L+ S
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSF 148
Query: 127 CKNGKVGRARSLMSDMEEPNDVTFSI--LICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ GK+ A +L+ E + L+ K + + +A+ L E+ F D T
Sbjct: 149 AEKGKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKT 208
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC VG+ AVE+L GG M GCLP++ TYN LI
Sbjct: 209 FNILIRGLCGVGKAEKAVELL-------------GG------MSGFGCLPDIVTYNTLIK 249
Query: 245 SYCETGVLDSALDVFNDMKID-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C++ L A ++F+D+K G S + VTY ++I G C G++ + +L M + G
Sbjct: 250 GFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDM--LRLG 307
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
+N ++ G + + A E +M FP V + I G+C G V
Sbjct: 308 IYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGF 367
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R +++M G PN Y LI+A C+E R+ +A EL+ ++ +P +N V+ G
Sbjct: 368 RLWEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ G V A+ +VEE + + P ++ LI C KG A + +MV G
Sbjct: 428 CKAGKVNEAIVIVEEMEK---KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCS 484
Query: 482 PDYLTWNSLLICL 494
PD +T +SLL CL
Sbjct: 485 PDKITVSSLLSCL 497
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 164/361 (45%), Gaps = 28/361 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L+ L +RV D KL ++ +N LI LC GK +A L+ M
Sbjct: 177 LLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFG 236
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEK-SFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ VT++ LI +CK L A + + S G PDVVT T ++ C G++ +A
Sbjct: 237 CLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEA 296
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+L++ M R G P T+N+L+ Y + G + +A ++
Sbjct: 297 SVLLDD-------------------MLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGK 337
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G + VT+ +LI G C G+++ G ++ + M + G Y+ ++ L +E
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEM--NARGMFPNAFTYSILINALCKE 395
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
N+ +A E L Q+ + + P+ + I GFC G V +A ++M ++ P+ + +
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITF 455
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
LI +C + R+ EA + +M G P T +++LS L + G A L + +
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAHK 515
Query: 440 G 440
G
Sbjct: 516 G 516
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 21/313 (6%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDL 63
QS D F +IRGL V+ +S F P + +N+++ K ++
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKK 259
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + +SG D TY ++ G C ++ + LL M G+ P +V +N L+
Sbjct: 260 ANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLV 319
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
K G++ A + M P+ VTF+ LI YC+ + L E+ + G
Sbjct: 320 DGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMF 379
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+ T + ++ LC R++ A E+L + + + GKV
Sbjct: 380 PNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVI 439
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++EME+K C P+ T+ ILI +C G + A+ +F+ M G S + +T +L+ L
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 284 GGRIDDGLKILQL 296
G + + Q+
Sbjct: 500 AGMAKEAYHLNQI 512
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 182/373 (48%), Gaps = 11/373 (2%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++MM+ G D TY+ ++ LC ++V + F L MKS V P+ Y LI S CK
Sbjct: 469 REMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKV 528
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR +M PN VT++ LI AY K + +A L E S G +P+VVT
Sbjct: 529 GLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY 588
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ C G++ A +I + V + K + PN+ TY L+
Sbjct: 589 TALIDGHCKSGQIEKACQIYARMRGNADIPDVD---MYFKIDDGNIRDPNIFTYGALVDG 645
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ + A D+ + M ++G N + YD LI G C G++D+ + M S+ G
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM--SERGYG 703
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+S++ L+++ + D AL+ L +M P + + I G C G ++A R
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y +I + + +V + ELM++M G P T+ +++ C
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCA 823
Query: 424 QGNVGTALKLVEE 436
G + A +L++E
Sbjct: 824 AGLLDDAHQLLDE 836
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 216/504 (42%), Gaps = 86/504 (17%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M +S + TY IL+ G ++G ++L +M + G P+ I+N+LIH+ C
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL--VNALVLLEKSF------- 174
++G A L+ M +P V ++ILI C E L ++ L L EK++
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAH 440
Query: 175 --------------------------------SFGFVPDVVTITKVLELLCSVGRVMDAV 202
S GF+PD T +KV+ LLC+ +V +A
Sbjct: 441 VVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAF 500
Query: 203 EILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+ EE ++G ++ ++ EM R GC PNV TY LI +Y
Sbjct: 501 LLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAY 560
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME-------- 298
+ + SA ++F M +G N VTY LI G C G+I+ +I M
Sbjct: 561 LKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDV 620
Query: 299 ------DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
D I Y +++ GL + ++ EA + L M E P + I G
Sbjct: 621 DMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDG 680
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC G +++A+ F +M E G PNV Y LI +++R+ A +++ M + P
Sbjct: 681 FCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPN 740
Query: 411 ASTFNTVLSGLCRQGNVGTALKLV---EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+ ++ GLC+ G A +L+ EE +G P Y+ +I + G
Sbjct: 741 VIIYTEMIDGLCKVGKTDEAYRLMSMMEE------KGCHPNVVTYTAMIDGFGKAGKVDK 794
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
L+ QM KG P+++T+ L+
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLI 818
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 214/505 (42%), Gaps = 59/505 (11%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
+IR R + N ++ + PS +N+++ V ++ D +D A +R+ M S
Sbjct: 203 LIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHRE-MSDS 261
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G D YT + LC R + L+ + K ++VIY +I LC+ A
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALI---EKEEFKLDTVIYTQMISGLCEASLFEEA 318
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+S M PN VT+ IL+C ++ L +L + G P ++
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC---- 247
C R G + LK+M GC P YNILI C
Sbjct: 379 YC-------------------RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419
Query: 248 --ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
VL+ A + +M + N V L R LC G+ + I++ M SK
Sbjct: 420 LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMM-----SK 474
Query: 306 GRI---SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G I S Y+ V+ L ++ D A ++M+ + P ++ I FC G ++ A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
++ FD+M+ +G PNVV Y LIHAY + ++ A+EL + M G +P T+ ++ G
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDG 594
Query: 421 LCRQGNVGTALKLVEEDMRG------------IGRGSL--PGSGHYSPLIKALCEKGGFQ 466
C+ G + A ++ MRG I G++ P Y L+ LC+ +
Sbjct: 595 HCKSGQIEKACQIYAR-MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVK 653
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A LL M +G P+++ +++L+
Sbjct: 654 EARDLLDVMSVEGCEPNHIVYDALI 678
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 163/350 (46%), Gaps = 31/350 (8%)
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
+TY L+ GLC ++V + LL VM G +PN ++Y+ LI CK GK+ A+ + +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
M E PN T+S LI K++ L AL +L + P+V+ T++++ LC VG+
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+A R + ME KGC PNV TY +I + + G +D L+
Sbjct: 757 TDEAY-------------------RLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLE 797
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ M G + NFVTY LI C+ G +DD ++L M+ + ++ Y V+ G
Sbjct: 798 LMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPK--HMAGYRKVIEG 855
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQM--IEEGGV 373
RE +L L ++ + + + +IL FC G +E A M
Sbjct: 856 FNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSA 913
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ +Y LI + +V +A EL +M G +P S F ++ GL R
Sbjct: 914 ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 212/498 (42%), Gaps = 48/498 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAF 67
PD S + VI L A +++ + + ++ P + + ++D K + AR +
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G + TY L+ ++ +L +M S G PN V Y LI C
Sbjct: 538 F-DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHC 596
Query: 128 KNGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNAL 167
K+G++ +A + + M +PN T+ L+ CK + A
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEAR 656
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
LL+ G P+ + +++ C VG++ +A + +M
Sbjct: 657 DLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV-------------------FTKM 697
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G PNV TY+ LI + LD AL V + M + + N + Y +I GLC G+
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D+ +++ +ME+ +G + Y +++ G + + D+ LE ++QM + P V
Sbjct: 758 DEAYRLMSMMEE--KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I C G ++DA + D+M + ++ Y +I + +E + L+ E+ +
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLG--LLDEIAEN 873
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+PI + ++ C+ G + AL+L + M S YS LI++L
Sbjct: 874 VAVPIIPAYRILIDSFCKAGRLELALEL-HKXMSSCTSYSAADKDLYSSLIESLSLASKV 932
Query: 466 QSASMLLVQMVGKGILPD 483
A L M+ +G +P+
Sbjct: 933 DKAFELYADMIKRGGIPE 950
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N+LI C G+ + AL+ +K G + +TY+ L+R R+D + + M D
Sbjct: 201 NVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 300 S------------------------------KEGSKGRISPYNSVLYGLYRENQQDEALE 329
S KE K Y ++ GL + +EA++
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 330 YLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+L +M P V + + G + KR MI EG P+ I++ LIHAYC
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR---- 443
+ A +L+K+M G P +N ++ G+C + +L ++E + G
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL-PSLDVLELAEKAYGEMLDA 439
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL--LICLSQQTTWL 501
+ + S L + LC G F+ A ++ +M+ KG +PD T++ + L+C + +
Sbjct: 440 HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNA 499
Query: 502 LLLL 505
LL
Sbjct: 500 FLLF 503
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 212/465 (45%), Gaps = 53/465 (11%)
Query: 50 NSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N ++ V V+ + D+A + YRK M + + Y++ IL+K C +++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRK-MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALV 168
G +P+ V +NTL+H LC ++ A +L Y E + A+
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALF----------------GYMVETGFLEAVA 212
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------- 212
L ++ G P V+T ++ LC GRV++A ++ + +G
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
++G K L +ME P+V Y+ +I C+ G A +F++M GI+ N
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEAL 328
TY+ +I G CS GR D ++L+ M + + I+P +N+++ +E + EA
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAE 386
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ +M +FP V + I GFC +DAK FD M P+VV ++ +I Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ +RV E +L++E++ G + +T+NT++ G C N+ A L +E I G
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE---MISHGVC 499
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + + L+ CE + A L + I D + +N ++
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 226/498 (45%), Gaps = 52/498 (10%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKED-IDLARAFY--------------RKKMMASGVQGDD 81
+++ P + FN++L L ED I A A + +M+ G+
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
T+ L+ GLCL RV + L++ M +G+ + V Y T+++ +CK G A +L+S
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
MEE P+ V +S +I CK+ + +A L + G P+V T +++ CS GR
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
DA R L++M + P+V T+N LIS+ + G L A
Sbjct: 347 WSDAQ-------------------RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ ++M I + VTY+++I G C R DD + LM + + +N+++
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTFNTIIDV 441
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
R + DE ++ L+++ + L + I GFC N+ A+ F +MI G P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV- 434
+ + L++ +C+ E++ EA EL + + +N ++ G+C+ V A L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-C 493
+ G+ P Y+ +I C K A++L +M G PD T+N+L+ C
Sbjct: 562 SLPIHGVE----PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 494 LSQQTTWLLLLLLNEMVS 511
L + L++EM S
Sbjct: 618 LKAGEIDKSIELISEMRS 635
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 213/464 (45%), Gaps = 34/464 (7%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
+ V D + +TP + FN++++ L E L A KM+ G+ D TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
G+C LL M+ +KP+ VIY+ +I LCK+G A+ L S+M E
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN T++ +I +C +A LL PDV+T +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA----------------L 372
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ S ++G+L + + C EM + P+ TYN +I +C+ D A +F+ M
Sbjct: 373 ISASVKEGKLFEAEKLC---DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA- 428
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
S + VT++T+I C R+D+G+++L+ E S+ G + YN++++G +
Sbjct: 429 ---SPDVVTFNTIIDVYCRAKRVDEGMQLLR--EISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A + ++M + P + ++ + GFC + +E+A F+ + + V Y+ +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
IH C+ +V EA +L + HG P T+N ++SG C + + A L + M+
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK-MK--D 600
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
G P + Y+ LI+ + G + L+ +M G D T
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 196/411 (47%), Gaps = 37/411 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
T++ G+ + + D A +L+S+ T P + I+++I+D L K+ + +M
Sbjct: 266 TIVNGMCK---MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G+ + +TY ++ G C R D +LL M R + P+ + +N LI + K GK+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L +M P+ VT++ +I +CK +A + F PDVVT +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTI 438
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+++ C R +V G + L+E+ R+G + N TYN LI +CE
Sbjct: 439 IDVYC-------------------RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L++A D+F +M G+ + +T + L+ G C ++++ L++ ++++ SK
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD--T 537
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN +++G+ + ++ DEA + + + P ++ I GFC + DA F +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
M + G P+ Y+ LI + + ++ EL+ EM +G+ A T V
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDL 63
+ + PD F T+I RA+ +++ ++ +SR + + +N+++ + D ++
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A+ + ++M++ GV D T IL+ G C ++ + +L V++ + ++V YN +I
Sbjct: 486 AQDLF-QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H +CK KV A L + EP+ T++++I +C + + +A VL K G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
PD T ++ G + ++E++ E G G
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/454 (27%), Positives = 202/454 (44%), Gaps = 31/454 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS +N +++ L ++ +L +A M + +T+ L+ G V L
Sbjct: 266 PSDVTYNVVINGLARKG-ELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGAL 324
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
M++ G+ P V YNT+IH + ++G V AR +M P+ +T++ LI YCK
Sbjct: 325 QLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCK 384
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
NL AL L G P V+T +L+ C RLG ++
Sbjct: 385 AGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYC-------------------RLGDLEE 425
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
RF +EM +GC P+V TY IL++ + L + F++M G+ + Y+T I
Sbjct: 426 ARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRIS 485
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE-NQQDEALEYLKQM-EKL 337
G + ++ ++M G YN L GL + N +D + ++K + + L
Sbjct: 486 AELILGSTSEAFQLTEVM--ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGL 543
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + + I C G + +A+ FD M+ G P+ V Y IHAYC+ + A
Sbjct: 544 QPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYG 603
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
++M G P T+N ++ LCR G A + E + RG P Y+ LI
Sbjct: 604 WFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE---RGLSPNKYTYTLLID 660
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C++G ++ A L +M GI PD+ T N+L
Sbjct: 661 GNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALF 694
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 229/511 (44%), Gaps = 76/511 (14%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
++ + P +K N +L L E D R+ Y +M+ G++ TY L+
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVY-AEMLQLGIEPSIVTYNTLLDSFFREG 245
Query: 96 RVGDGFKLLHVMKSR--GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---EEPNDVTF 150
RV KLL M++R G P+ V YN +I+ L + G++ +A L+ M ++ + TF
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTF 305
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ LI Y ++ A L + + G VP VVT ++ + G V E
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNV-----------E 354
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
R+ V EM G LP++ TYN LI+ YC+ G L AL +F D+K G++ +
Sbjct: 355 AARMKFV--------EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPS 406
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
+TY+ L+ G C G +++ + Q M + +G + +S Y ++ G + E+
Sbjct: 407 VLTYNILLDGYCRLGDLEEARRFKQEMVE--QGCQPDVSTYTILMNGSRKVRNLAMVREF 464
Query: 331 LKQM--------------------------------EKLFPRAVDR-----SLKILGFCV 353
+M E + R + ++ + G C
Sbjct: 465 FDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCK 524
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
GN++DA + +M+ +G P+ + Y CLIHA+C+ R+REA ++ M G P A T
Sbjct: 525 SGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVT 584
Query: 414 FNTVLSGLCRQGNVGTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
+ + CR+GN+ +A K++EE +R P Y+ LI ALC G A
Sbjct: 585 YTVFIHAYCRRGNLYSAYGWFQKMLEEGVR-------PNEVTYNVLIHALCRMGRTNLAY 637
Query: 470 MLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+M+ +G+ P+ T+ L+ ++ W
Sbjct: 638 QHFHEMLERGLSPNKYTYTLLIDGNCKEGNW 668
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 25/347 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + ++I G +A + + + + R + PS+ +N +LD + D++ AR F
Sbjct: 370 PDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRF 429
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++M+ G Q D TY ILM G + + M S+G++P+ YNT I +
Sbjct: 430 -KQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAEL 488
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G A L M + VT++I + CK NL +A VL K S G PD +
Sbjct: 489 ILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCI 548
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T ++ C GR+ +A +I + G R G + + ++M
Sbjct: 549 TYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKM 608
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G PN TYN+LI + C G + A F++M G+S N TY LI G C G
Sbjct: 609 LEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNW 668
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
++ +++ M + G +N++ G + E Q A++Y++ +
Sbjct: 669 EEAIRLYSEMH--QHGIHPDHCTHNALFKG-FDEGQSKHAIQYMENV 712
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 6/270 (2%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM G P + N+++ + + D V+ +M GI + VTY+TL+
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
GR+D K+L+ ME G YN V+ GL R+ + ++A + + +M ++ +A
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASA 302
Query: 344 RSLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I G+ G+VE A +M EG VP VV Y+ +IH + V A E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G LP T+N++++G C+ GN+ AL L + R G P Y+ L+ C
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRA---GLAPSVLTYNILLDGYCR 419
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + A +MV +G PD T+ L+
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILM 449
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 200/436 (45%), Gaps = 32/436 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS-RGVKPNSVI-YNTLIHSLC 127
++M G + D ++Y IL+KGLC LLH+M +G P V+ Y T+I+ L
Sbjct: 159 RRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLL 218
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ +A SL M P+ VT+S +I A K + + A + + G +PD +
Sbjct: 219 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI 278
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ CS G+ +A+ I K+M R G P+V TY L+
Sbjct: 279 MYTSLVHGYCSSGKPKEAIGI-------------------FKKMCRHGVEPDVVTYTALM 319
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G A +F+ + G + TY TL+ G + G + + +L LM K+G
Sbjct: 320 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM--MKKG 377
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ +N ++ + N+ DEAL M + L P V+ + C G V+DA
Sbjct: 378 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 437
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F+ + EG PN+V++ LIH C ++ + EL EM G FN ++ L
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 497
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++G V A L + +R G P + Y+ LI C G A LL MV G+
Sbjct: 498 CKKGRVIEAKNLFDLMVR---IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVK 554
Query: 482 PDYLTWNSLLICLSQQ 497
P +T+N+++ SQ
Sbjct: 555 PSDVTYNTIINGYSQN 570
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 170/425 (40%), Gaps = 95/425 (22%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDI 61
H + P D + TVI GL R ++ D + +P + ++SI+ L K + +
Sbjct: 199 HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAM 258
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A + +M+ +GV D Y L+ G C + + + + M GV+P+ V Y
Sbjct: 259 DKATQVF-TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 317
Query: 122 LIHSLCKNGKVGRAR----SLMSDMEEPNDVT---------------------------- 149
L+ LCKNGK AR SL+ +P+ T
Sbjct: 318 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 377
Query: 150 -------FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
F++++ AY K + AL++ G PD+V VL++LC+ GRV DA+
Sbjct: 378 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 437
Query: 203 EILEESGEQG-------------------------------------------------- 212
+G
Sbjct: 438 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 497
Query: 213 -RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ G+V M R G PN +TYN LI YC G +D A+ + M +G+ +
Sbjct: 498 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 557
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-Y 330
VTY+T+I G GRI+DGL +L+ M+ +G I Y +L GL++ + A E Y
Sbjct: 558 VTYNTIINGYSQNGRIEDGLTLLREMDG--KGVNPGIVTYEMLLQGLFQAGRTVAAKELY 615
Query: 331 LKQME 335
L+ ++
Sbjct: 616 LRMIK 620
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 172/401 (42%), Gaps = 37/401 (9%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN T+ I+I + L A + + + G + + +L+ LC R DA++I
Sbjct: 97 PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ L+ M GC P++ +Y IL+ C+ ALD+ + M
Sbjct: 157 V------------------LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMAD 198
Query: 265 DG--ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ V Y T+I GL G++D + M D G + Y+S++ L +
Sbjct: 199 HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLD--RGPSPDVVTYSSIISALSKTQ 256
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D+A + +M K + P + + + G+C G ++A F +M G P+VV Y
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 316
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ C+ + EA ++ + G+ P ++T+ T+L G +G + L++ M+
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK- 375
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC----- 493
+G G ++ ++ A + A ++ M +G+ PD + + ++L +C
Sbjct: 376 --KGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 433
Query: 494 ---LSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSL 531
LSQ + L +V F ++H L +K K+ L
Sbjct: 434 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEEL 474
>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 216/459 (47%), Gaps = 32/459 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ + + Y I++ C+ R D ++M RG P V +NT+I++ CK G V AR
Sbjct: 88 EPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARK 147
Query: 138 LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
L ++E PN + ++ L+ Y K + A +L E+ G PD +T ++
Sbjct: 148 LFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHY 207
Query: 194 SVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVD 237
GR D +L++ G L G++ FL +M KG P++
Sbjct: 208 KYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSII 267
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QL 296
+N +I++Y + G+ D A + + M G++ + T +L+ GL GR+ + +++ Q+
Sbjct: 268 AFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQM 327
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
+E +G + +L ++ A +ME+ +FP V S I G
Sbjct: 328 IE---KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQ 384
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G VE+A F +M+ +G +PN Y+ LI +C+ ++ EA +L K M G LP T
Sbjct: 385 GLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTT 444
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ GLC+QG + +A+ V DM G P Y+ LI C+ +A L+ +
Sbjct: 445 NMIIGGLCKQGRMRSAIN-VFMDMHQTGLS--PDIITYNTLINGYCKAFDMVNADNLVNR 501
Query: 475 MVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVS 511
M G PD T+N + C S++ +L+L+E+VS
Sbjct: 502 MYASGSNPDLTTYNIRIHGFCSSRRMN-RAVLMLDELVS 539
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 203/434 (46%), Gaps = 30/434 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K ++ G Q YT++ ++ G C + G LLH+M +PN+ YN +I++ C
Sbjct: 45 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 104
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G+ A + + M E P VTF+ +I A+CKE N+V A L + GF P+ +
Sbjct: 105 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 164
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ + R +D +L E EM +KG P+ T+NIL+S
Sbjct: 165 NTLMNGYVKM-REIDQANMLYE------------------EMRKKGIAPDGITFNILVSG 205
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ + G + + D+ + G+ + +D + GLC GR+D+ ++ LM+ ++G
Sbjct: 206 HYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEF--LMDMLEKGLS 263
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
I +NSV+ + +D+A E K M L P S ++G ++G +++A
Sbjct: 264 PSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATEL 323
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
QMIE+G N + + L+ + + V A L EM G P F+ + GL +
Sbjct: 324 IGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSK 383
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
QG V A + E +R +G +P + Y+ LI C+ G A L M +G+LPD
Sbjct: 384 QGLVEEAYNVFLEMLR---KGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPD 440
Query: 484 YLTWNSLLICLSQQ 497
T N ++ L +Q
Sbjct: 441 IFTTNMIIGGLCKQ 454
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 194/426 (45%), Gaps = 26/426 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P F TVI + + + K D + +P+ ++N++++ VK +ID A
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++M G+ D T+ IL+ G R DG +LL + G+ P+ +++ + LC
Sbjct: 184 Y-EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLC 242
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A + DM E P+ + F+ +I AY + A + FG P
Sbjct: 243 WAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPS 302
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + +L L GR+ +A E++ + E+G + G V G EM
Sbjct: 303 TCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 362
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
ER+G P+V ++ I + G+++ A +VF +M G+ N Y++LI G C G++
Sbjct: 363 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 422
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++ LK+ ++M G I N ++ GL ++ + A+ M + L P + +
Sbjct: 423 NEALKLEKVMR--HRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYN 480
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+C ++ +A ++M G P++ Y+ IH +C R+ A ++ E+
Sbjct: 481 TLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 540
Query: 406 GYLPIA 411
G L +
Sbjct: 541 GILSFS 546
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 168/386 (43%), Gaps = 60/386 (15%)
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR-----------L 214
AL +L + G P + + +LL VG + ++ ++ +G L
Sbjct: 5 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64
Query: 215 GKVKGGCRFLKE-----MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
G + GC L E M + C PN YNI+I++ C G AL FN M G +
Sbjct: 65 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124
Query: 270 NFVTYDTLIRGLCSGG------RIDDGLKILQLMEDS----------------------- 300
VT++T+I C G ++ DGLK + ++
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184
Query: 301 KEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL---KILGF 351
+E K I+P +N ++ G Y+ ++++ LK + L P DRSL + G
Sbjct: 185 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLP---DRSLFDISVSGL 241
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G +++A M+E+G P+++ ++ +I AY Q +A E K M G P
Sbjct: 242 CWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 301
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
ST +++L GL G + A +L+ + I +G + ++ L+ ++G A L
Sbjct: 302 STCSSLLMGLSINGRLQEATELIGQM---IEKGLSVNNMAFTVLLDKFFKRGDVVGAQSL 358
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQ 497
+M +GI PD + +++ + LS+Q
Sbjct: 359 WGEMERRGIFPDVVAFSAFIDGLSKQ 384
>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Cucumis sativus]
Length = 481
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 202/429 (47%), Gaps = 45/429 (10%)
Query: 29 DVVKAT---DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
DV++A DL+ R + P + FN +L L K + KM +G+ D +T
Sbjct: 70 DVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLN 129
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI---HSLCKNGKVGRARSLMSDM 142
IL LC NRV +G + + RG P+ V YNTLI + LCK G A+ + +M
Sbjct: 130 ILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEM 189
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ PN +++S L+ +C L + L + G P++V ++++LC
Sbjct: 190 KAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILC----- 244
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
++G++G + + M KGC N +Y ILI+ YC+ ++ A+++
Sbjct: 245 -----------KEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNL 293
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+N+M G N TY TL+ GL G++ D K+ +M+ S I Y L GL
Sbjct: 294 YNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCI--YVIFLDGL 351
Query: 319 YRENQQDEALEYLKQMEKL--------FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+ EA+E +++ + R +D G C G VE A F Q+ +E
Sbjct: 352 CKNGVLFEAMELFNELKSYNFKLDFESYSRLID------GLCKAGKVEIAWEFFKQLSQE 405
Query: 371 GGVPNVVIYDCLIHAYCQEERVREAS---ELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
G PNVV + +IH +C+ E+V +A+ E M++M +G P T+NT+L G C +
Sbjct: 406 GLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKL 465
Query: 428 GTALKLVEE 436
+ L+ +
Sbjct: 466 EEVVNLLHK 474
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 32/275 (11%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
F M R +P + ++N L+ + ++N M++ G+S + T + L L
Sbjct: 76 HFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCL 135
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C+ R+ +GL + + + G I YN+++ GLY
Sbjct: 136 CNLNRVSEGLAAMTGI--LRRGYIPDIVTYNTLIKGLY---------------------- 171
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
G C G+ ++AK F++M +G +PNV+ Y L+H +C ++ E+ L E
Sbjct: 172 --------GLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNE 223
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G P FN ++ LC++G +G + + +G Y+ LI C+
Sbjct: 224 MVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCK 283
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ A L +M G P+ T+++LL L Q
Sbjct: 284 IWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQ 318
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 7/173 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T++ GL + + D K ++ ++ I+ LD L K +
Sbjct: 304 PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMEL 363
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ + + D +Y+ L+ GLC +V ++ + G++PN V N +IH C+
Sbjct: 364 FNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCR 423
Query: 129 NGKVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNALVLLEKSF 174
+V +A L ME+ P+ +T++ L+ +C+ L + LL K F
Sbjct: 424 VEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF 476
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 183/369 (49%), Gaps = 30/369 (8%)
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF 174
++ + + CK VG+A L+ +M +P+ VT+++LI CKE L A+ L
Sbjct: 85 FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
S+G P+V+T +L +CS GR MDA ++L + M RKGC P
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD-------------------MLRKGCSP 185
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V T+NILI+ C G+L A+D+ M + G + N ++Y+ L+ G C ++D ++ L
Sbjct: 186 SVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 245
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
+M G I YN++L L ++ + D A+E L Q+ P + + I G
Sbjct: 246 DIM--VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS 303
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G E A + D+M +G P+++ Y L+ +E +V EA + ++ G G P A
Sbjct: 304 KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 363
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+N+++ GLC+ A+ + I + P Y+ LI+ + +G + A LL
Sbjct: 364 TYNSIMLGLCKSRQTDRAIDFLA---YMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 420
Query: 473 VQMVGKGIL 481
++ +G++
Sbjct: 421 NELCSRGLV 429
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 24/352 (6%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
++ ++ C + VG KLL M+++G KP+ V YN LI+ +CK G++ A +++M
Sbjct: 85 FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+PN +T +I++ + C ++A LL G P VVT ++ LC G +
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
A++ILE+ G + K+ +L M +GC P++ TYN L+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++ C+ G +D A+++ N + G S +TY+T+I GL G+ + +K+L M ++G
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR--RKG 322
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK 361
K I Y+S++ GL RE + DEA+++ +E L P A+ + +LG C + A
Sbjct: 323 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 382
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
MI + P Y LI E +EA +L+ E+ G + +S
Sbjct: 383 DFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 9/281 (3%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ L EM KG P+V TYN+LI+ C+ G LD A+ N+M G N +T++ ++R +
Sbjct: 103 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 162
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFP 339
CS GR D K+L M ++G + +N ++ L R+ A++ L++M P
Sbjct: 163 CSTGRWMDAEKLLSDM--LRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 220
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
++ + + GFC + ++ A D M+ G P++V Y+ L+ A C++ +V A E++
Sbjct: 221 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 280
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+++ G P+ T+NTV+ GL + G A+KL++E R +G P YS L+ L
Sbjct: 281 NQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR---KGLKPDIITYSSLVSGL 337
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
+G A + G GI P+ +T+NS++ +C S+QT
Sbjct: 338 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQT 378
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 165/329 (50%), Gaps = 24/329 (7%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYA 85
+ +K D + P + +N +++ + KE +D A F M + G Q + T+
Sbjct: 98 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL-NNMPSYGCQPNVITHN 156
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
I+++ +C T R D KLL M +G P+ V +N LI+ LC+ G +GRA ++ M
Sbjct: 157 IILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMH 216
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN ++++ L+ +CKE+ + A+ L+ S G PD+VT +L LC G+V A
Sbjct: 217 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 276
Query: 202 VEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
VEIL + +G ++GK + + L EM RKG P++ TY+ L+S
Sbjct: 277 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 336
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
G +D A+ F+D++ GI N +TY++++ GLC + D + L M + K
Sbjct: 337 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKR--CK 394
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ Y ++ G+ E EAL+ L ++
Sbjct: 395 PTEATYTILIEGIAYEGLAKEALDLLNEL 423
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C + V A + D+M +G P+VV Y+ LI+ C+E R+ EA + + M +G P
Sbjct: 93 CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T N +L +C G A KL+ + +R +G P ++ LI LC +G A +
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLR---KGCSPSVVTFNILINFLCRQGLLGRAIDI 209
Query: 472 LVQMVGKGILPDYLTWNSLL 491
L +M G P+ L++N LL
Sbjct: 210 LEKMPMHGCTPNSLSYNPLL 229
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
S F+ + C++ VG A+KL++E MR +GS P Y+ LI +C++G A
Sbjct: 83 SGFSFYVQTTCKESGVGQAMKLLDE-MRN--KGSKPDVVTYNVLINGICKEGRLDEAIKF 139
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
L M G P+ +T N +L + W+
Sbjct: 140 LNNMPSYGCQPNVITHNIILRSMCSTGRWM 169
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 219/474 (46%), Gaps = 32/474 (6%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ ++ ++D + +DLA AF+ ++ G++ D + L++GLC R +
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFF-GCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159
Query: 103 LL-HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP------NDVTFSILIC 155
+L H M G P+++ Y+T++ S+C +G+ A ++ + N V +S ++
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
KE + A L + G P+VVT V+ LC V A IL + G
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
LG+ K R KEM +G +PN T + ++ C+ G ++ A + F
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G N ++Y TL+ G + G + D + LM ++G +N ++ G
Sbjct: 340 DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLM--VRDGIVPNQHVFNILVNGYA 397
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ EA+ + M+K L P + I FC G+++DA F+ MI++G PN
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y CLI +C + +A EL+ E+ G P +F ++++ LC++G V A ++ +
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+R G ++ LI C G A + MV GI PD +T+ +L+
Sbjct: 518 IR---TGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 125/493 (25%), Positives = 229/493 (46%), Gaps = 36/493 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P + ++ TV+ GL + + + +++ + P++ +NS++ L K +D A+
Sbjct: 208 PCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQG 267
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
R+ M+ +GVQ D+ TY L+ G + ++ M SRGV PN+V +T + L
Sbjct: 268 ILRQ-MVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFL 326
Query: 127 CKNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+G++ AR S+++ + N +++S L+ Y LV+ L G VP+
Sbjct: 327 CKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQ 386
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
++ G V +A+ I E+ M+++G P+V TY +
Sbjct: 387 HVFNILVNGYAKCGMVREAMFIFED-------------------MQKRGLNPDVLTYLAV 427
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I ++C G +D A+D FN M G+ NF Y LI+G C+ G D +K +L+ + +
Sbjct: 428 IHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHG---DLVKAEELVYEIRN 484
Query: 303 GSKGR-ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA---VDRSLKILGFCVDGNVE 358
G I + S++ L +E + EA + + +A + SL I G+C+ G +
Sbjct: 485 KGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSL-IDGYCLIGKMS 543
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A R D M+ G P++V Y L++ C+ R+ + L +E+ G P T+ +L
Sbjct: 544 EAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIIL 603
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GL G A ++ +E + ++P YS L+ LC + A + ++
Sbjct: 604 DGLFHAGRTAAAKEMFQEMIESGIAVTIPT---YSILLTGLCRNNCTEEAITVFQKLCAM 660
Query: 479 GILPDYLTWNSLL 491
+ D + N ++
Sbjct: 661 NVKFDIVILNIMI 673
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/510 (24%), Positives = 224/510 (43%), Gaps = 29/510 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + T+I G V+ ++ + P+ ++ + L K I+ AR F
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+A G + + +Y+ L+ G + D L ++M G+ PN ++N L++
Sbjct: 339 F-DSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A + DM++ P+ +T+ +I A+C+ ++ +A+ G P+
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFA 457
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+++ C+ G ++ A E++ E +G + G+V R +
Sbjct: 458 VYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMI 517
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R G +V+ + LI YC G + A V + M GI + VTY TL+ G C GRI
Sbjct: 518 IRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRI 577
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
DDGL + + E +G K Y +L GL+ + A E ++M + S
Sbjct: 578 DDGLILFR--ELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYS 635
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ + G C + E+A F ++ ++VI + +I + R EA L + +
Sbjct: 636 ILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDY 695
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G +P T+ ++ L ++G+V A + ++ G P S + +++ L EKG
Sbjct: 696 GLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKS---GLSPTSHFINVIVRTLLEKGEI 752
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLS 495
A + + ++ GK IL + T + LL S
Sbjct: 753 VKAGIYMCRVDGKSILFEASTASMLLSLFS 782
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 191/454 (42%), Gaps = 24/454 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ T++ G A + D+ +L+ R + P+ +FN +++ K + F + M
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ D TY ++ C + D + M +GV+PN +Y LI C +G +
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLV 473
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A L+ ++ P ++F+ LI CKE + A + + G DV T ++
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLI 533
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
+ C +G++ +A + + G + G++ G +E+ KG
Sbjct: 534 DGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVK 593
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P TY I++ G +A ++F +M GI+ TY L+ GLC ++ + +
Sbjct: 594 PTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITV 653
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF 351
Q + K I N ++ +++ +++EA + L P ++ +
Sbjct: 654 FQKL--CAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENL 711
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+G+VE+A+ F M++ G P + ++ ++ + +A M + G L A
Sbjct: 712 IKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEA 771
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
ST + +LS +G L L+ + G GS
Sbjct: 772 STASMLLSLFSCKGKHREHLNLLPAKYQFFGGGS 805
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 126/263 (47%), Gaps = 8/263 (3%)
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP V TY+ILI C LD A F + G+ + + +L+RGLC R D+ +
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL----KQMEKLFPRAVDRSLKI 348
+L + G Y++VL + + + AL+ L KQ V S +
Sbjct: 160 VL-FHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVV 218
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G +G V +A F +M ++G PNVV Y+ +IHA C+ V +A ++++M G+G
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T+NT++ G G A+++ +E RG +P + S + LC+ G + A
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKE---MTSRGVIPNTVTCSTFVAFLCKHGRIEEA 335
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
M+ KG + +++++LL
Sbjct: 336 REFFDSMLAKGHKLNIISYSTLL 358
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 19/299 (6%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL- 331
TY LI C R+D + ++G K + +S+L GL + DEA++ L
Sbjct: 105 TYSILIDCCCRARRLDLAFAFFGCL--LRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLF 162
Query: 332 KQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG-VP-NVVIYDCLIHAYC 387
+M +L P A+ S + C DG + A +++GG P NVV+Y ++H
Sbjct: 163 HRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLF 222
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+E +V EA +L EMT G P T+N+V+ LC+ V A ++ + +G G P
Sbjct: 223 KEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQ---MVGNGVQP 279
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLN 507
+ Y+ LI G ++ A + +M +G++P+ +T ++ + L + +
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGR------IE 333
Query: 508 EMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHVF 566
E F + AK + + S + L HG + + + + + + D V HVF
Sbjct: 334 EAREF---FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 4 SIQSPPDESIFITVIRGLGRARMIND-VVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
S+ PD + T++ G + I+D ++ +L+ + + P+ + ILD L
Sbjct: 554 SVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHK-GVKPTTFTYGIILDGLFHAGRT 612
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A ++M+ SG+ TY+IL+ GLC N + + + + VK + VI N +
Sbjct: 613 AAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIM 672
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I + K + A L + + + P T++I++ KE ++ A + G
Sbjct: 673 ISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGL 732
Query: 179 VPDVVTITKVLELLCSVGRVMDA 201
P I ++ L G ++ A
Sbjct: 733 SPTSHFINVIVRTLLEKGEIVKA 755
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 50/454 (11%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVK---------- 113
A++F + ++ G G + + + GLC + R G M G++
Sbjct: 9 AKSFLHRNLLEKGNSGTSPSSSFSICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDL 68
Query: 114 ----------PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
P+ ++ L+ ++ K K L M+ N T +IL+ +C+
Sbjct: 69 FFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCR 128
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
L AL L K G PD+VT +L C R+ DA+ + + E G
Sbjct: 129 CSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY------ 182
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
PNV YN +I C++ +D+ALD+ N M++DGI + VTY++LI
Sbjct: 183 -------------EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS 229
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
GLC+ GR DD +++ M +K + +N+++ +E + EA E ++M L
Sbjct: 230 GLCNSGRWDDATRMVSCM--TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSL 287
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V SL I G C+ +++A++ F M+ +G P+VV Y LI+ YC+ ++V +
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L EM+ G + T+ ++ G CR G + A ++ + + G P Y+ L+
Sbjct: 348 LFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKW---MVFCGVPPNIITYNVLLH 404
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ G + A ++L M G+ D +T+N ++
Sbjct: 405 GLCDNGKIEKALVILADMQKSGMDADIVTYNIII 438
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 202/432 (46%), Gaps = 28/432 (6%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-E 59
H +Q P SI F ++ + + + + V+ + + + +L N +L+ +
Sbjct: 71 HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCS 130
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ LA +F KMM G + D T+ L+ G C +R+ D + M G +PN VIY
Sbjct: 131 QLSLALSFL-GKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIY 189
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NT+I LCK+ +V A L++ ME P+ VT++ LI C +A ++
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTK 249
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRF--LKE 226
PDV T +++ GR+ +A E+ EE + + G C + L E
Sbjct: 250 REIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 227 MER-------KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
E+ KGC P+V TY+ILI+ YC++ ++ + +F +M G+ N VTY LI+
Sbjct: 310 AEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQ 369
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C G+++ +I + M G I YN +L+GL + ++AL L M+K +
Sbjct: 370 GYCRAGKLNVAEEIFKWMVFC--GVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
V ++ I G C G V DA + + +G P++ Y ++ ++ EA
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADA 487
Query: 398 LMKEMTGHGYLP 409
L ++M G LP
Sbjct: 488 LFRKMKEDGILP 499
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 174/374 (46%), Gaps = 29/374 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +++ G R I D + D + P++ I+N+I+D L K + +D A
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M G++ D TY L+ GLC + R D +++ M R + P+ +N LI +
Sbjct: 209 L-NRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A L +M +P+ VT+S+LI C L A + S G PDVV
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C + KV+ G + EM ++G + N TY +LI
Sbjct: 328 TYSILINGYC-------------------KSKKVEHGMKLFCEMSQRGVVRNTVTYTVLI 368
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G L+ A ++F M G+ N +TY+ L+ GLC G+I+ L IL M+ K G
Sbjct: 369 QGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ--KSG 426
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
I YN ++ G+ + + +A + ++ L P + +LG G +A
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEAD 486
Query: 362 RCFDQMIEEGGVPN 375
F +M E+G +PN
Sbjct: 487 ALFRKMKEDGILPN 500
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 372 GVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G+P N+ + L++ +C+ ++ A + +M G+ P TF ++L+G CR + A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L + + R + G P Y+ +I LC+ +A LL +M GI PD +T+NSL
Sbjct: 171 LYMFD---RMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSL 227
Query: 491 LICLSQQTTW 500
+ L W
Sbjct: 228 ISGLCNSGRW 237
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/538 (24%), Positives = 241/538 (44%), Gaps = 62/538 (11%)
Query: 41 NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
+ P + + +++ L + +ID A A ++ SG+Q TY +LM LC + RV +
Sbjct: 206 TVAPDVHTYTAMIKALCRAGEIDAAFAML-AELRRSGIQPTVVTYNVLMDALCKSGRVEE 264
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILIC 155
F+L M V+P+ V + LI L + + G +++ +M+ PN+V ++ +I
Sbjct: 265 AFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIG 324
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL- 214
+C++ + AL L ++ S G VVT + + LC G + A +IL+E G +
Sbjct: 325 WHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMV 384
Query: 215 ----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
G++ R ++EM + PN I C++G + A ++
Sbjct: 385 HCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEI 444
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
+ + G+ N T + LI GLC G + + K+L+ M +S G + YN ++ G
Sbjct: 445 WFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS--GVELDRITYNIMIQGC 502
Query: 319 YRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ ++ DEA++ M K P ++ + +C G VE+ DQM EG P++
Sbjct: 503 CKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDI 562
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y +I YC+ + + +A+E + E+ +G P A +N ++ G R GN+ A+ ++ +
Sbjct: 563 VTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGIL-D 621
Query: 437 DMRGIGRGSLP---------------------------------GSGHYSPLIKALCEKG 463
M+ G P G Y+ +I+ C+ G
Sbjct: 622 TMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIG 681
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVSFVMVVHELS 520
A M +M +GI P+ +T+ +L+ S+ L +EMVS +V +S
Sbjct: 682 KIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVS 739
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 203/435 (46%), Gaps = 42/435 (9%)
Query: 12 SIFITVI----RGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
S+F +V+ RG GR ++ +++ ++++RF + P+ + + + L K A
Sbjct: 387 SLFNSVVAWHLRGTGRLDLVLRLIR--EMLARF-LKPNDALMTACIQELCKSGKHEEAAE 443
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++ G+ + T L+ GLC N + + K+L M + GV+ + + YN +I C
Sbjct: 444 IWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCC 503
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K+ A L DM +P+ TF+I + YC + L LL++ S G PD+V
Sbjct: 504 KASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIV 563
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C + A E +L E+ + G PN YN LI
Sbjct: 564 TYGTIIDGYCKAKDMHKANE-------------------YLTELMKNGLRPNAVIYNALI 604
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ--LMEDSK 301
Y G + A+ + + MK +GI VTY++L+ +C G +++ + +++D +
Sbjct: 605 GGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIE 664
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
G G Y ++ G + + DEA+ Y K+M + P + + + + GN E+
Sbjct: 665 LGVIG----YTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEE 720
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + FD+M+ G VP+ V Y+ LI +C+ + + + E EM+ ++N +
Sbjct: 721 ASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVD 780
Query: 420 GL----CRQGNVGTA 430
G+ C++ V A
Sbjct: 781 GITTPWCQKEAVSNA 795
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 146/336 (43%), Gaps = 45/336 (13%)
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGLCS 283
E+ +G P++ T +IL+ + G LD A VF +M+ DG ++ + TY +I+ LC
Sbjct: 165 ELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMR-DGKTVAPDVHTYTAMIKALCR 223
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G ID +L E + G + + YN ++ L + + +EA +M ++ P
Sbjct: 224 AGEIDAAFAMLA--ELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSI 281
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + I G + +M G PN VIY+ +I +C++ EA +L E
Sbjct: 282 VTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDE 341
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-------------------DMRGIG 442
M G T+N + LC++G + A K+++E +RG G
Sbjct: 342 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTG 401
Query: 443 RGSL--------------PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
R L P + I+ LC+ G + A+ + Q++GKG+ + T N
Sbjct: 402 RLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSN 461
Query: 489 SLLICLSQ-----QTTWLLLLLLNEMVSFVMVVHEL 519
+L+ L Q + T +L ++N V + + +
Sbjct: 462 ALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNI 497
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 10/267 (3%)
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G L A D F ++ G S + T L+ L GG++D K+ M D K + +
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPD-VH 212
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
Y +++ L R + D A L ++ + + P V ++ + C G VE+A R +M
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+E P++V + LI + ++ E +++EM G G P +N ++ CR+G+
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332
Query: 428 GTALKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
ALKL +E + +GI + + Y+ + KALC++G + A +L +M+ G++
Sbjct: 333 SEALKLFDEMVSKGIKQTVVT----YNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388
Query: 487 WNSLLICLSQQTTW--LLLLLLNEMVS 511
+NS++ + T L+L L+ EM++
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLA 415
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 217/477 (45%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+L + ++D + L AF+ +++ +G+ D + L++GLC R +
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFF-GQVLKTGLGIDTIMISNLLRGLCEAKRTAEA 162
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH M G P+ Y ++ SLC + K G+A L+ M E PN V ++ +
Sbjct: 163 LDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTV 222
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQG 212
I + KE ++ A L + G PD+ T V+ LC R MD E IL + ++G
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCK-ARAMDKAEAILRQMVDKG 281
Query: 213 RL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
L G+ K R K+M +G LP+V T N L++S C+ G + A
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + +Y ++ G + G + D ++ LM I +N ++
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI--FNVLIK 399
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
+ D A +M + + P V S I C G ++DA F+QMI++G P
Sbjct: 400 AYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAP 459
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++ Y LI +C + +A +L+ +M G P FN +++ LC+ G V A +
Sbjct: 460 SISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF 519
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ I G P Y+ L+ C G ++A + MV GI P+ + + +L+
Sbjct: 520 DFT---ISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLV 573
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 211/487 (43%), Gaps = 67/487 (13%)
Query: 71 KMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MMA G + Y ++ G V L + M RG+ P+ YN ++++LC
Sbjct: 203 RMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALC 262
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + +A +++ M + P++ T++ LI Y A+ + +K S G +PDVV
Sbjct: 263 KARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVV 322
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL---------- 233
T+ ++ LC G++ DA ++ + +G+ + L KGCL
Sbjct: 323 TLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLM 382
Query: 234 ------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
P+ +N+LI +Y + G+LD A +FN+M+ G+ + VTY T+I LC G++
Sbjct: 383 LSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKM 442
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----------- 336
DD ++ M D +G IS Y+ ++ G +A + + QM
Sbjct: 443 DDAVEKFNQMID--QGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFN 500
Query: 337 --------------------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
L P + + + G+C+ G +E+A R FD M+
Sbjct: 501 FIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSA 560
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG-NVGT 429
G PNVV+Y L++ YC+ R+ E L +E+ G P + +N +L GL + G V
Sbjct: 561 GIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPA 620
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
+K E GI YS ++ L + A +L ++ + D T N
Sbjct: 621 KVKFHEMTESGIAMDRYT----YSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676
Query: 490 LLICLSQ 496
++ + Q
Sbjct: 677 MIAGMFQ 683
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 146/561 (26%), Positives = 226/561 (40%), Gaps = 137/561 (24%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
P+ + TVI G + DV KA DL + ++P L +N +++ L K +D A
Sbjct: 214 PNAVAYNTVIDGFFKE---GDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKA 270
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A R+ M+ GV D++TY L+ G T + + ++ M S+G+ P+ V N+L+
Sbjct: 271 EAILRQ-MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMA 329
Query: 125 SLCKNGKVGRARS---------------------------------------LMSDMEEP 145
SLCK+GK+ AR ++SD P
Sbjct: 330 SLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAP 389
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
+ F++LI AY K L A ++ + G PDVVT + V+ LC +G++ DAVE
Sbjct: 390 DSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKF 449
Query: 206 EESGEQG---------------------------------------------------RL 214
+ +QG +L
Sbjct: 450 NQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKL 509
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G+V G PNV YN L+ YC G +++AL VF+ M GI N V Y
Sbjct: 510 GRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVY 569
Query: 275 DTLIRGLCSGGRIDDGLKILQ--LMEDSKEGS------------KGRISP---------- 310
TL+ G C GRID+GL + + L + K + GR P
Sbjct: 570 GTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTE 629
Query: 311 ---------YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVED 359
Y+ VL GL++ + DEA+ K++ + + +L I+ G VE+
Sbjct: 630 SGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEE 689
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG-YLPIASTFNTVL 418
AK F + G VP+VV Y ++ +E V EA ++ M G P + N V+
Sbjct: 690 AKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVV 749
Query: 419 SGLCRQGNV---GTALKLVEE 436
L + + GT L ++E
Sbjct: 750 RELLEKREIVRAGTYLSKIDE 770
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY--LPIASTFNTVLSGLCR 423
+M G VP+V Y ++ + C + + +A EL++ M G LP A +NTV+ G +
Sbjct: 169 RMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFK 228
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+G+V A L E + RG P Y+ ++ ALC+ A +L QMV KG+LPD
Sbjct: 229 EGDVNKACDLFNE---MVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285
Query: 484 YLTWNSLLICLSQQTTW 500
T+NSL+ S W
Sbjct: 286 NWTYNSLIYGYSSTGQW 302
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 200/436 (45%), Gaps = 32/436 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS-RGVKPNSVI-YNTLIHSLC 127
++M G + D ++Y IL+KGLC LLH+M +G P V+ Y T+I+ L
Sbjct: 160 RRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLL 219
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ +A SL M P+ VT+S +I A K + + A + + G +PD +
Sbjct: 220 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI 279
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ CS G+ +A+ I K+M R G P+V TY L+
Sbjct: 280 MYTSLVHGYCSSGKPKEAIGI-------------------FKKMCRHGVEPDVVTYTALM 320
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G A +F+ + G + TY TL+ G + G + + +L LM K+G
Sbjct: 321 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM--MKKG 378
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ +N ++ + N+ DEAL M + L P V+ + C G V+DA
Sbjct: 379 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 438
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F+ + EG PN+V++ LIH C ++ + EL EM G FN ++ L
Sbjct: 439 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 498
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++G V A L + +R G P + Y+ LI C G A LL MV G+
Sbjct: 499 CKKGRVIEAKNLFDLMVR---IGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVK 555
Query: 482 PDYLTWNSLLICLSQQ 497
P +T+N+++ SQ
Sbjct: 556 PSDVTYNTIINGYSQN 571
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 170/425 (40%), Gaps = 95/425 (22%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDI 61
H + P D + TVI GL R ++ D + +P + ++SI+ L K + +
Sbjct: 200 HKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAM 259
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D A + +M+ +GV D Y L+ G C + + + + M GV+P+ V Y
Sbjct: 260 DKATQVF-TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 318
Query: 122 LIHSLCKNGKVGRAR----SLMSDMEEPNDVT---------------------------- 149
L+ LCKNGK AR SL+ +P+ T
Sbjct: 319 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKG 378
Query: 150 -------FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
F++++ AY K + AL++ G PD+V VL++LC+ GRV DA+
Sbjct: 379 MQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDAL 438
Query: 203 EILEESGEQG-------------------------------------------------- 212
+G
Sbjct: 439 SQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNL 498
Query: 213 -RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ G+V M R G PN +TYN LI YC G +D A+ + M +G+ +
Sbjct: 499 CKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSD 558
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-Y 330
VTY+T+I G GRI+DGL +L+ M+ +G I Y +L GL++ + A E Y
Sbjct: 559 VTYNTIINGYSQNGRIEDGLTLLREMDG--KGVNPGIVTYEMLLQGLFQAGRTVAAKELY 616
Query: 331 LKQME 335
L+ ++
Sbjct: 617 LRMIK 621
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 19/322 (5%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGL 281
L+ M GC P++ +Y IL+ C+ ALD+ + M + V Y T+I GL
Sbjct: 159 LRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGL 218
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
G++D + M D G + Y+S++ L + D+A + +M K + P
Sbjct: 219 LREGQLDKAYSLFDAMLD--RGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMP 276
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ + + G+C G ++A F +M G P+VV Y L+ C+ + EA ++
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIF 336
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ G+ P ++T+ T+L G +G + L++ M+ +G G ++ ++ A
Sbjct: 337 DSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK---KGMQLGHHIFNMIMGAY 393
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC--------LSQQTTWLLLLLLNEM 509
+ A ++ M +G+ PD + + ++L +C LSQ + L +
Sbjct: 394 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 453
Query: 510 VSFVMVVHELSAKEKRCKLRSL 531
V F ++H L +K K+ L
Sbjct: 454 VVFTTLIHGLCTCDKWDKVEEL 475
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 45/311 (14%)
Query: 223 FLKEMERKGCL---PNVDTYNILISSYCETGVLDSALDVFN------------------- 260
M R G PN+ TY I+I G LD A
Sbjct: 83 LFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQ 142
Query: 261 ---------DMKID---------GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
M++D G + +Y L++GLC L +L +M D K
Sbjct: 143 GPLCTAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKG 202
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
+ Y +V+ GL RE Q D+A M P V S I ++ A
Sbjct: 203 RCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKA 262
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F +M++ G +P+ ++Y L+H YC + +EA + K+M HG P T+ ++
Sbjct: 263 TQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDY 322
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC+ G A K+ + ++ RG P S Y L+ +G LL M+ KG+
Sbjct: 323 LCKNGKSTEARKIFDSLVK---RGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGM 379
Query: 481 LPDYLTWNSLL 491
+ +N ++
Sbjct: 380 QLGHHIFNMIM 390
>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 199/439 (45%), Gaps = 31/439 (7%)
Query: 50 NSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
N +L V +++ A A R+ GV+ D ++ L+ G C R + LL M
Sbjct: 152 NWVLRVGLRQRHHFAHA--RQAFDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWR 209
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
G +S ++ + C+ G+ L M E PN V ++ + CK +
Sbjct: 210 EGFSLDSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQ 269
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A +LE+ G P+V T T +++ LC +G A + FLK
Sbjct: 270 AFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRL------------------FLK 311
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
++ PNV TY ++I YC+ G L A + M G++ N TY TLI G C GG
Sbjct: 312 LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGG 371
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
D +++ M+ EG I YN+++ G ++ + +A + L+ + L P V
Sbjct: 372 SFDRAFELMNKMK--LEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVT 429
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I C G++ A F+QM E P++ Y +I YCQ+ ++ ++ +L +
Sbjct: 430 YTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCL 489
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G +P T+ ++++G CR G +ALK+ E R + G LP Y LI LC++
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRVGKSTSALKVFE---RMVQHGCLPDPITYGALISGLCKES 546
Query: 464 GFQSASMLLVQMVGKGILP 482
+ A L M+ K ++P
Sbjct: 547 RLEEARALFETMLDKHMVP 565
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 193/452 (42%), Gaps = 42/452 (9%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + Y + GLC V F +L M +G+KPN + +LI LCK G
Sbjct: 241 RMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIG 300
Query: 131 KVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
RA L S +PN T++++I YCKE L A +LL + G P+ T
Sbjct: 301 WTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTY 360
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ C G A E++ + M+ +G LPN+ TYN +I
Sbjct: 361 TTLIDGHCRGGSFDRAFELMNK-------------------MKLEGFLPNIYTYNAIIGG 401
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G + A V G+ + VTY LI C G I L + M ++
Sbjct: 402 FCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQM--AENSCH 459
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK-----LFPRAVDRSLKILGFCVDGNVEDA 360
I Y +++ +Y + +Q E + L +K L P + I G+C G A
Sbjct: 460 PDIDTYTTII-AMYCQQRQMEQSQQL--FDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSA 516
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ F++M++ G +P+ + Y LI C+E R+ EA L + M +P T T+
Sbjct: 517 LKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYE 576
Query: 421 LCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
CR+ A+ ++ D R + L++ L +AS+ L ++ K
Sbjct: 577 YCRRDKTTIAVSFLDGLDKRQQAHAA-------DALVRKLSAVDNLDAASLFLKNVLDKH 629
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
D+ T+ S + + + L ++E +S
Sbjct: 630 YAVDHATYTSFINSCYESNRYALASEISEKIS 661
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 179/394 (45%), Gaps = 36/394 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY- 68
D + V+R R DV + P++ + + +D L K + +AF+
Sbjct: 215 DSATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGY-VKQAFHV 273
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL-LHVMKSRGVKPNSVIYNTLIHSLC 127
++M+ G++ + YT+ L+ GLC F+L L ++KS KPN Y +I C
Sbjct: 274 LEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYC 333
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ RA L+ M E PN T++ LI +C+ + A L+ K GF+P++
Sbjct: 334 KEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIY 393
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C G++ A ++L R+ +G C P+ TY +LI
Sbjct: 394 TYNAIIGGFCKKGKIQQAYKVL-------RMATSQGLC------------PDKVTYTMLI 434
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ G + ALD+FN M + + TY T+I C +++ ++ K
Sbjct: 435 TEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFD-----KCL 489
Query: 304 SKGRI---SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
S G + Y S++ G R + AL+ ++M + P + I G C + +E
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLE 549
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+A+ F+ M+++ VP V L + YC+ ++
Sbjct: 550 EARALFETMLDKHMVPCDVTCVTLAYEYCRRDKT 583
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 157/401 (39%), Gaps = 60/401 (14%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH-SLCKNGKVGRARSLMSDME-EPNDVTFS 151
TNR+ + +L ++S G+ N ++ L + AR M P+ +F
Sbjct: 126 TNRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFDGMGVRPDARSFR 185
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
L+ C+E A LL + GF D T T V+ C Q
Sbjct: 186 ALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFC----------------RQ 229
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR V G M G PNV Y + C+ G + A V +M G+ N
Sbjct: 230 GRFRDVPG---LFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNV 286
Query: 272 VTYDTLIRGLCSGGRIDDGLKI-LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
T+ +LI GLC G + ++ L+L++ S Y+ N
Sbjct: 287 YTHTSLIDGLCKIGWTERAFRLFLKLVKSSS-----------------YKPNVHTY---- 325
Query: 331 LKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++ I G+C +G + A+ +M+E+G PN Y LI +C+
Sbjct: 326 --------------TVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGG 371
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
A ELM +M G+LP T+N ++ G C++G + A K++ +G P
Sbjct: 372 SFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLR---MATSQGLCPDKV 428
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI C++G A L QM PD T+ +++
Sbjct: 429 TYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTII 469
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLS-GLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ R+REA++++ E+ HG + T N VL GL ++ + A + + G G
Sbjct: 125 ETNRLREATDMLLELRSHGLPLVVETANWVLRVGLRQRHHFAHARQAFD------GMGVR 178
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL----L 502
P + + L+ C++G F+ A LL M +G D T ++ +Q + L
Sbjct: 179 PDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGL 238
Query: 503 LLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGS-VWLGLRIHDTTHTFIIDRRVE 561
+ EM + VV+ + + CK + H V GL+ + THT +ID +
Sbjct: 239 FGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCK 298
Query: 562 IG 563
IG
Sbjct: 299 IG 300
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ G D TY L+ GLC +R+ + L M + + P V TL + C+
Sbjct: 521 ERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRR 580
Query: 130 GKVGRARSLMSDMEEPNDVTFS-ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
K A S + +++ + L+ +NL A + L+ + D T T
Sbjct: 581 DKTTIAVSFLDGLDKRQQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSF 640
Query: 189 LELLCSVGRVMDAVEILEE 207
+ R A EI E+
Sbjct: 641 INSCYESNRYALASEISEK 659
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 253/591 (42%), Gaps = 72/591 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+E + +I+ L +A ++ + + R + P++ +N ++D L K + AF
Sbjct: 220 NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG-RVEEAFRL 278
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K +M G+ T+ IL+ GL R G+ +L M+ GV PN VIYN LI C+
Sbjct: 279 KGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCR 338
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +A L +M +P VT++++ A CKE + A +LE S G
Sbjct: 339 KGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL 398
Query: 185 ITKVLE-LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
V+ LL R+ V I E +G + GK + +
Sbjct: 399 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 458
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG N+ T N LI CE + A V M GI + +TY+ +IRG C ++
Sbjct: 459 LNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
++ +K+ M ++ G K + +N++L+ + +E L QM E L P V
Sbjct: 519 EEAIKLHGDM--TRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYG 576
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C ++ AK ++++ G PNV IY+ LI Y + + A + ++ M +
Sbjct: 577 TIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSN 636
Query: 406 GYLPIASTFNTVLSGLC---------------RQGNVGTAL--------------KLVE- 435
G P T+ +++ +C R+ NV + K+VE
Sbjct: 637 GIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEA 696
Query: 436 ----EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E+MR RG P Y+ L+ A + G + AS L +MVG G++PD +T+ +L+
Sbjct: 697 VAYFEEMRS--RGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLI 754
Query: 492 ICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVW 542
S+ +N + + ELS+ R N L++G + W
Sbjct: 755 ARCSE---------VNSLDKDIGHTAELSSGALTKDDRMYNILSNGINAPW 796
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 223/483 (46%), Gaps = 29/483 (6%)
Query: 33 ATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
A ++S PS+K N+ L+ LV+ +D AR + + + V ++Y+Y ++K L
Sbjct: 172 AFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKAL 231
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
C +V GF++L + G++P V YN L+ +LCK+G+V A L ME+ P+
Sbjct: 232 CKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSV 291
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VTF ILI + E ++L++ G P+ V +++ C G A+ + +E
Sbjct: 292 VTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDE 351
Query: 208 ----------------SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE-TG 250
+ + G+++ R L++M G + +N +++ + T
Sbjct: 352 MVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTR 411
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
L+S + + N+M G+ N +R LC GG+ + + I + +G ++
Sbjct: 412 RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGI--WFKTLNKGLGVNLAT 469
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
N++++GL EA + ++ M + + ++ ++ I G C D +E+A + M
Sbjct: 470 SNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 529
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G P++ ++ L+HAYC ++ E L+ +M G P ++ T++ G C+ ++
Sbjct: 530 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A + + E M RG P Y+ LI G A + M GI P +T+
Sbjct: 590 KAKEYLTELM---DRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYG 646
Query: 489 SLL 491
SL+
Sbjct: 647 SLM 649
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 140/307 (45%), Gaps = 44/307 (14%)
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID-G 266
S QG L + R L +G P++ T N + + G LD+A +VF++M+
Sbjct: 160 SPAQGSLCRAADAFRVLSS---RGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRN 216
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
++ N +Y +I+ LC G++D G ++L L+R Q
Sbjct: 217 VALNEYSYTAMIKALCKAGKVDAGFEMLA---------------------ELWRAGLQPT 255
Query: 327 ALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ Y M+ L C G VE+A R +M + G P+VV + LI+
Sbjct: 256 VVTYNVLMDAL--------------CKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGL 301
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ ER E +++EM G P +N ++ CR+G+ AL+L +E + +
Sbjct: 302 ARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM---VLKKMK 358
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL--LLL 504
P + Y+ + KALC++G + A +L M+ G+ +N+++ L Q+T L ++
Sbjct: 359 PTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVS 418
Query: 505 LLNEMVS 511
+ NEMV+
Sbjct: 419 ITNEMVT 425
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 231/496 (46%), Gaps = 62/496 (12%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
H ++S P SI F ++ + + + + V+ + ++ L N +++ +
Sbjct: 61 HMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSS 120
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ + K+M G + D +T+ L+ G CL NR+ + +++ M G+KP+ VIY
Sbjct: 121 QPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYT 180
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
T+I SL CK ++ NAL L + ++G P
Sbjct: 181 TIIDSL-------------------------------CKNGHVDNALSLFNQMENYGIRP 209
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
DVV T ++ LC+ GR DA ++L L+ M ++ P+V T+N
Sbjct: 210 DVVMYTSLVNGLCNSGRWRDA-DLL------------------LRGMMKRKIKPDVITFN 250
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI ++ + G L A +++N+M I+ N TY +LI GLC GR+D+ ++ LME
Sbjct: 251 ALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLME-- 308
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
+G + Y S++ G + + ++A++ +M + L + + I GF + G
Sbjct: 309 TKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPN 368
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH---GYLPIASTFN 415
A+ F M+ G PN+ Y+ L+H C +V +A + ++M G P T+N
Sbjct: 369 VAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYN 428
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+L GLC G + AL +V DM+ R G Y+ +I+ +C+ G + A L +
Sbjct: 429 VLLHGLCYNGKLEKAL-MVFGDMQK--RDMDIGIITYTIIIQGMCKAGKVKDALNLFCSL 485
Query: 476 VGKGILPDYLTWNSLL 491
KG+ P+ +T+ +++
Sbjct: 486 PSKGVKPNVVTYTTMI 501
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 173/394 (43%), Gaps = 62/394 (15%)
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL---MSDMEEPNDV-TFSILICAYCKE 160
H+++SR + P+ + + L++ + K K +L + M ND+ T ++L+ +C+
Sbjct: 61 HMVESRPL-PSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQS 119
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
A L K GF PD+ T T ++ C R+ +A+ ++ +
Sbjct: 120 SQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQ------------- 166
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
M G P+V Y +I S C+ G +D+AL +FN M+ GI + V Y +L+ G
Sbjct: 167 ------MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNG 220
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
LC+ GR D + +L G+ + K+ P
Sbjct: 221 LCNSGRWRDA---------------------DLLLRGMMKR--------------KIKPD 245
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + I F +G + DAK +++MI+ PN+ Y LI+ C E R+ EA ++
Sbjct: 246 VITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFY 305
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
M G P + ++++G C+ V A+K+ E + +G + Y+ LI+
Sbjct: 306 LMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQ---KGLTGNTITYTTLIQGFG 362
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
G A + MV +G+ P+ T+N LL CL
Sbjct: 363 LVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 150/337 (44%), Gaps = 69/337 (20%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD ++ +++ GL GR R + +++ + + + P + FN+++D VKE L
Sbjct: 209 PDVVMYTSLVNGLCNSGRWRDADLLLRG---MMKRKIKPDVITFNALIDAFVKEGKLLDA 265
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+M+ + + +TY L+ GLC+ R+ + ++ ++M+++G P+ V Y +LI+
Sbjct: 266 KELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLING 325
Query: 126 LCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSF----SFG 177
CK KV A + +M + N +T++ LI + LV + ++ F S G
Sbjct: 326 FCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGF----GLVGKPNVAQEVFGHMVSRG 381
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P++ T +L LC G+V A+ I E+ +++ E G PN+
Sbjct: 382 VPPNIRTYNVLLHCLCYNGKVNKALMIFED----------------MQKREIDGVPPNIR 425
Query: 238 TYNILISSYCETGVLDSALDVFNDMK---------------------------------- 263
TYN+L+ C G L+ AL VF DM+
Sbjct: 426 TYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSL 485
Query: 264 -IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
G+ N VTY T+I GL G + + + + M++
Sbjct: 486 PSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKE 522
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 119/271 (43%), Gaps = 34/271 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDIDLARA 66
P+ + ++I GL +++ + L+ P + + S+++ K + D +
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
FY +M G+ G+ TY L++G L + ++ M SRGV PN YN L+H L
Sbjct: 339 FY--EMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCL 396
Query: 127 CKNGKVGRARSLMSDMEE-------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
C NGKV +A + DM++ PN T+++L+ C L AL++ FG +
Sbjct: 397 CYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMV------FGDM 450
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG--RLGKVKGGCRFLKEMERKGCLPNVD 237
R MD I QG + GKVK + KG PNV
Sbjct: 451 QK---------------RDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVV 495
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGIS 268
TY +IS G++ A +F MK DG+S
Sbjct: 496 TYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 4/162 (2%)
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC A ++++ G P++ + LI+ +C R+ EA ++ +M G P
Sbjct: 116 FCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPD 175
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+ T++ LC+ G+V AL L + M G P Y+ L+ LC G ++ A +
Sbjct: 176 VVIYTTIIDSLCKNGHVDNALSLFNQ-MENYG--IRPDVVMYTSLVNGLCNSGRWRDADL 232
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
LL M+ + I PD +T+N+L+ ++ L L NEM+
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ 274
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/476 (26%), Positives = 218/476 (45%), Gaps = 32/476 (6%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ D L+KG C R +
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ Y+ L+ SLC GK G+A L+ M E P+ V ++ +
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
I + KE ++ A L ++ G PD+VT + V+ LC + A L + +G
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289
Query: 214 L----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
L G+ K R KEM R LP+V T N+L+ S C+ G + A D
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARD 349
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
VF+ M + G + + +Y ++ G + G + D + LM +G I ++ ++
Sbjct: 350 VFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLM--LGDGIAPDIYTFSVLIKA 407
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
D+A+ +M + P V + I C G ++DA F+QMI++G P+
Sbjct: 408 YANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 467
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
Y CLI +C + +A EL+ E+ +G F+++++ LC+ G + A + +
Sbjct: 468 KYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFD 527
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G P + YS L+ C G + A + MV GI P+ + + +L+
Sbjct: 528 ---LTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 580
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 226/500 (45%), Gaps = 42/500 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
PD + TVI + DV KA DL + P L ++S++ L K + A
Sbjct: 221 PDVVAYTTVIDCFFKE---GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKA 277
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF R+ M+ GV D++TY L+ G T + + ++ M+ + P+ V N L+
Sbjct: 278 EAFLRQ-MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMG 336
Query: 125 SLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
SLCK GK+ AR + M + P+ ++ I++ Y + LV+ L + G P
Sbjct: 337 SLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAP 396
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D+ T + +++ + G + A+ I E M G P+V TY
Sbjct: 397 DIYTFSVLIKAYANCGMLDKAMIIFNE-------------------MRDHGVKPDVVTYT 437
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL-MED 299
+I++ C G +D A++ FN M G++ + Y LI+G C+ G + LK +L +E
Sbjct: 438 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL---LKAKELILEI 494
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNV 357
G + I ++S++ L + + +A + P AV S+ + G+C+ G +
Sbjct: 495 MNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKM 554
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A R FD M+ G PNVV+Y L++ YC+ R+ E L +EM G P +N +
Sbjct: 555 EKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614
Query: 418 LSGLCRQG-NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ GL G V +K E GI Y+ +++ + F A L ++
Sbjct: 615 IDGLFVAGRTVPAKVKFHEMTESGIAINKCT----YNIVLRGFFKNRCFDEAIFLFKELR 670
Query: 477 GKGILPDYLTWNSLLICLSQ 496
+ D +T N+++ + Q
Sbjct: 671 AMNVKIDIITLNTMIAGMFQ 690
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 158/366 (43%), Gaps = 58/366 (15%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D YT+++L+K + + + M+ GVKP+ V Y T+I +LC+ GK
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + M + P+ + LI +C +L+ A L+ + + G D+V +
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSS 508
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ LC +GR+MDA I + + G+ P+ Y++L+ YC
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQH-------------------PDAVVYSMLMDGYC 549
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G ++ AL VF+ M GI N V Y TL+ G C GRID+GL + + M ++G K
Sbjct: 550 LVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM--LQKGIKPS 607
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN ++ GL+ V G AK F +M
Sbjct: 608 TILYNIIIDGLF---------------------------------VAGRTVPAKVKFHEM 634
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
E G N Y+ ++ + + EA L KE+ T NT+++G+ + V
Sbjct: 635 TESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 694
Query: 428 GTALKL 433
A L
Sbjct: 695 EEAKDL 700
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 138/303 (45%), Gaps = 22/303 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +I+ M++ + + + + P + + +++ L + +D A
Sbjct: 396 PDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEK 455
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ GV D Y Y L++G C + +L+ + + G++ + V ++++I++LC
Sbjct: 456 F-NQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLC 514
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A+++ + P+ V +S+L+ YC + AL + + S G P+VV
Sbjct: 515 KLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 574
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
++ C +GR+ + + + E ++G G+ EM
Sbjct: 575 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEM 634
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G N TYNI++ + + D A+ +F +++ + + +T +T+I G+ R+
Sbjct: 635 TESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 694
Query: 288 DDG 290
++
Sbjct: 695 EEA 697
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 350 GFCVDGNVEDA-KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC ++A + E G VP+V Y L+ + C + + +A +L++ M G +
Sbjct: 159 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 218
Query: 409 --PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P + TV+ ++G+V A L +E ++ RG P YS ++ ALC+
Sbjct: 219 CSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQ---RGIPPDLVTYSSVVHALCKARAMG 275
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A L QMV KG+LPD T+N+L+ S W
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 309
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 114/285 (40%), Gaps = 20/285 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + TVI L R ++D ++ + + + P ++ ++ L
Sbjct: 431 PDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKEL 490
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M +G++ D ++ ++ LC R+ D + + + G P++V+Y+ L+ C
Sbjct: 491 ILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCL 550
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ +A + M EPN V + L+ YCK + L L + G P +
Sbjct: 551 VGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 610
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL-----------GKVKGGCR-----FLKEME 228
+++ L GR + A E E G G K C KE+
Sbjct: 611 YNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELR 670
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
++ T N +I+ +T ++ A D+F + G+ VT
Sbjct: 671 AMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 231/524 (44%), Gaps = 52/524 (9%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQG------DDYTYAILMKGLCLTNRV 97
P+L IFN+++ L R R GV G D +Y ILMKG CL +
Sbjct: 224 PNLAIFNAMIFGLCH------RGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQA 277
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSIL 153
D F L M+ G P V YN L++ LC+ G++ AR L +M E N +TF++L
Sbjct: 278 EDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVL 337
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR----VMDAVEILEESG 209
I Y K + NA + + + G +PD T + G+ V+D ++ E G
Sbjct: 338 IDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKAALFVLDQQQLHEMFG 397
Query: 210 EQ----------GRL---GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
Q RL G++ L KG +V +N LI++Y + G + A
Sbjct: 398 SQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALIAAYSKEGFDEEAF 457
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+++ M G++ + T + LI GLC+ GR+D L+ M I+ + L
Sbjct: 458 ELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYM---VRMGYCVIASFTIYLD 514
Query: 317 GLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
+R AL+ M+ L P V S + G C +++A F +MI G VP
Sbjct: 515 SSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVP 574
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
N Y+ LI A+C+ V EA +L ++M G +P T N ++ G CR+G + TA L
Sbjct: 575 NNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLF 634
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
M IG P Y+ ++ A C A + + +M+ G PD T+N
Sbjct: 635 -FGMYSIGL--TPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYN------ 685
Query: 495 SQQTTWLLLLLLNEMVS-FVMVVHELSAKEKRCKLRSLNHLAHG 537
W+ L N +++ +M++ EL+A + + N L G
Sbjct: 686 ----IWMHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDG 725
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 26/274 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD F + GL R +++ + R + P+ +NS++ + +++ A
Sbjct: 539 PDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAG-NVSEALK 597
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+KM SG+ D +T IL+ G C + L M S G+ P+ V YNT++++ C
Sbjct: 598 LEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVVTYNTMLNAYC 657
Query: 128 K----NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ NG + +++D EP+ T++I + + C L A++LL++ + P+ V
Sbjct: 658 RSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDELAATDCAPNSV 717
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ +CS V+D IL GRL K+ PN T NIL
Sbjct: 718 TYNTLMDGICS--DVLDRAMIL-----TGRLIKL-------------AFQPNTVTINILF 757
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
S +C+ G AL ++ D +++ T + L
Sbjct: 758 SHFCKNGFGKRALVWAEKLRDDSFNFDDATRNIL 791
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+ + ++ G+ D ALDV ++ G + + L+R L GG + K+ + M +
Sbjct: 161 LALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVFEEM--A 218
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVE 358
G + ++ +N++++GL + L M + P A ++ + G C+ G E
Sbjct: 219 ARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYNILMKGHCLYGQAE 278
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA FD+M G P +V Y+ L++ C+E R+ EA L EM G TFN ++
Sbjct: 279 DAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLI 338
Query: 419 SGLCRQGNVGTALKLVEEDMRGIG 442
G + G + A + +M+ +G
Sbjct: 339 DGYAKAGQMENA-NMACAEMKAMG 361
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
R R L + F G ++A ++ G P++ L+ + VR A ++
Sbjct: 155 RYAARRLALHAFLAAGMADEALDVLARVRRAGDTPSLSALAALLRLLFRGGEVRAAWKVF 214
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI-GRGS-LPGSGHYSPLIK 457
+EM G P + FN ++ GLC +G L V + G+ GR +P + Y+ L+K
Sbjct: 215 EEMAARGPRPNLAIFNAMIFGLCHRG-----LVRVSGGLLGVMGRFHVVPDACSYNILMK 269
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C G + A L +M G P +T+N L+
Sbjct: 270 GHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILM 303
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 224/487 (45%), Gaps = 69/487 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPS--------------------LKI 48
PD+ + T+IRG +A I V + +TP+ L+I
Sbjct: 50 PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109
Query: 49 FNSILDVLVKED----------------IDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
F+ ++D+ VK D +DLA +++ ++M+ SG D TY +L+ L
Sbjct: 110 FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYF-ERMVQSGCLPDKVTYTVLVHSLF 168
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
+ G ++ M S+G P V Y T+++ CK G++ +A SLM ++ P+
Sbjct: 169 KACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGS 228
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
+S LI CK + A L E + G V DV+ T + LC G++
Sbjct: 229 LYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKL---------- 276
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
++ + VK M GC P+ +YN++I S C+ + A ++ +
Sbjct: 277 -DEAKAVHVK--------MIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCM 327
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
L+ GLC R+++ IL+ M ++ + + ++ Y++V+ GL + ++ D+A
Sbjct: 328 PGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVT-YSAVIDGLCKADRLDDAY 386
Query: 329 EYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
L++M + P V + I FC G +++A+ F +M E G +VV Y+ LI Y
Sbjct: 387 VVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGY 446
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ +V EA +++EM G G P + +T++ GLC++ V A L+E+ + SL
Sbjct: 447 CRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEK----MNFESL 502
Query: 447 PGSGHYS 453
P S S
Sbjct: 503 PDSDPVS 509
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 229/503 (45%), Gaps = 64/503 (12%)
Query: 50 NSILDVLVKEDIDLARAFYR--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
NS+L+V V + R YR K + + + DD+TY L++G C ++ LL M
Sbjct: 21 NSLLEVFVNDGCH--REAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSL---MSDME-EPNDVTFSILICAYCKEENL 163
K+ G+ P V + +LI LC+ +A + M DM+ +P+ ++++I CK L
Sbjct: 79 KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A E+ G +PD VT T ++ L + EQG +
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACK-----------WEQGH--------QI 179
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM KG P + TY +++ YC+ G +D AL + +K G S + Y TLI GLC
Sbjct: 180 FEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCK 239
Query: 284 GGRIDDGLKILQL-----------------------MEDSKE--------GSKGRISPYN 312
R D+ ++ ++ ++++K G YN
Sbjct: 240 HDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYN 299
Query: 313 SVLYGLYRENQQDEALEYLKQ-ME-KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++Y L ++N+ EA E + Q ME K P ++ + G C VE+A ++M+E
Sbjct: 300 VIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLET 359
Query: 371 GG-VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+VV Y +I C+ +R+ +A ++++M G +P T+ ++ C+ G +
Sbjct: 360 GDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDE 419
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L + R RG Y+ LI+ C A ++ +M G+GI P+ ++ ++
Sbjct: 420 ARELFQ---RMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLST 476
Query: 490 LLICLSQQTTWLLLLLLNEMVSF 512
++ L +++ LL E ++F
Sbjct: 477 IVDGLCKESRVEEARLLMEKMNF 499
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 133/301 (44%), Gaps = 36/301 (11%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R G N T N L+ + G A VF D + + TY TLIRG C +I
Sbjct: 10 RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ +L M+ + G I + S++ L N D+AL+ QM K+ P A ++
Sbjct: 70 QAVNLLGEMKAA--GITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTV 127
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I C ++ A F++M++ G +P+ V Y L+H+ + + + ++ +EM G
Sbjct: 128 VIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 187
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR---GSLPGS------GH------ 451
+ P T+ TV++G C+ G + AL L+ ++G GR GSL + H
Sbjct: 188 HSPELVTYATVVNGYCKAGRIDQALSLMRR-LKGTGRSPSGSLYSTLIDGLCKHDRHDEA 246
Query: 452 ----------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
Y+ I LC+ G A + V+M+ G PD +++N ++ L
Sbjct: 247 RELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC 306
Query: 496 Q 496
+
Sbjct: 307 K 307
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 219/506 (43%), Gaps = 65/506 (12%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
I+D V + + PS+ FN+I+ +VK K+M+ GV +T +I
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG---------------- 130
+ C +G F +L ++ RG +PN++ T++ LC NG
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 131 ----------------KVGR---ARSLMSDME----EPNDVTFSILICAYCKEENLVNAL 167
K+GR A L+ +ME +PN V ++++I ++CK+E A
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
L K G PD++T T ++ C G+ G+VK + + EM
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFC----------------RTGQWGEVK---QLMCEM 285
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
K PNV T+N+LI ++C G + A +FN M G + VT++TLI G C G +
Sbjct: 286 VNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNV 345
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
+ K+ + + G + Y ++ G + + DEA+ +M + + V S
Sbjct: 346 LEARKLFDTVFE--RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYS 403
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C G + A F + +G PNV+ Y+ LI A+C+ + + EL K M G
Sbjct: 404 SLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGK 463
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+N +++G C+ + A+ L+ + P S Y+ L LC+ G
Sbjct: 464 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ---SKNLAPDSITYNSLFDGLCKSGRI 520
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A L M G D T+N LL
Sbjct: 521 SDAWELFKVMHVGGPPVDVATYNVLL 546
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 58/414 (14%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + A G+ D+ Y L+ GLC R D F+LL M+ + VKPN VIYN +I S C
Sbjct: 176 FHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFC 235
Query: 128 KNGKVGRARSL---MSDME-EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ +AR L + DM +P+ +T++ LI +C+ L+ + + P+V
Sbjct: 236 KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 295
Query: 184 TITKVLELLCSVGRVMDA---VEILEESGEQGRL-------------GKVKGGCRFLKEM 227
T +++ C G++++A ++ + G+Q + G V + +
Sbjct: 296 TFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTV 355
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G LP+V +Y ILI YC+ +D A+ +FN+M+ + + V Y +LI GLC GRI
Sbjct: 356 FERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRI 415
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
++ + + +G + YN +
Sbjct: 416 SYAWELFSTINN--DGPPPNVITYN---------------------------------IL 440
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I FC +++ F M +G P V+ Y+ LI+ YC+ +R+REA L+ M
Sbjct: 441 IDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNL 500
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
P + T+N++ GLC+ G + A +L + G G Y+ L+ A C+
Sbjct: 501 APDSITYNSLFDGLCKSGRISDAWELFKVMHVG---GPPVDVATYNVLLDAFCK 551
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 191/391 (48%), Gaps = 31/391 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL-ARAFY 68
DE + T+I GL + D + + + P++ I+N I+D K+++ AR Y
Sbjct: 188 DEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLY 247
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K++ G+ D TY L++G C T + G+ +L+ M ++ + PN +N LI + C+
Sbjct: 248 L-KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCR 306
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A+ + + M ++P+ VTF+ LI +C N++ A L + F G +PDV +
Sbjct: 307 KGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWS 366
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T ++ C R+ +AV + EM K + ++ Y+ LI
Sbjct: 367 YTILIIGYCKCKRIDEAVSLFN-------------------EMRCKNMVLDIVLYSSLID 407
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C++G + A ++F+ + DG N +TY+ LI C ID G+++ +LM +G
Sbjct: 408 GLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLM--CGKGL 465
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YN ++ G + + EA+ L M+ L P ++ + G C G + DA
Sbjct: 466 TPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWE 525
Query: 363 CFDQMIEEGGVP-NVVIYDCLIHAYCQEERV 392
F +++ GG P +V Y+ L+ A+C+ + V
Sbjct: 526 LF-KVMHVGGPPVDVATYNVLLDAFCKAQDV 555
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 25/311 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++IRG R +V + + N+ P++ FN ++D ++ +
Sbjct: 257 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGM 316
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ G Q D T+ L+ G CL V + KL + RG+ P+ Y LI CK
Sbjct: 317 FNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCK 376
Query: 129 NGKVGRARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
++ A SL ++M N V +S LI CK + A L + G P+V+T
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 436
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C ++ + G K M KG P V TYNILI+
Sbjct: 437 YNILIDAFC-------------------KIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 477
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC++ + A+++ + M+ ++ + +TY++L GLC GRI D ++ ++M G
Sbjct: 478 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVG--GP 535
Query: 305 KGRISPYNSVL 315
++ YN +L
Sbjct: 536 PVDVATYNVLL 546
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 10/320 (3%)
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
SF + D VT+ L + + V+ I+ G ++ LK+M KG P
Sbjct: 61 SFNGIDDAVTLFNHLINMQPLPSVIQFNTII---GSVVKMKHCPVAISLLKQMVFKGVTP 117
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
++ T +I I+ YC G + A V + G N +T T+++GLC G + +
Sbjct: 118 SIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH 177
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
+ +G Y +++ GL + + +A + L++ME + P V ++ I FC
Sbjct: 178 D--NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFC 235
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
D A+ + ++++ G P+++ Y LI +C+ + E +LM EM P
Sbjct: 236 KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVY 295
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
TFN ++ CR+G + A + ++ RG P ++ LI C G A L
Sbjct: 296 TFNVLIDAFCRKGKMIEAQGMFNLMVK---RGQQPDIVTFNTLISGHCLHGNVLEARKLF 352
Query: 473 VQMVGKGILPDYLTWNSLLI 492
+ +GILPD ++ L+I
Sbjct: 353 DTVFERGILPDVWSYTILII 372
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+N+++ + + A+ LKQM + + P S+ I +C G + A ++
Sbjct: 87 FNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVL 146
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G PN + ++ C V++A + + G L + T+++GLC+ G
Sbjct: 147 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A +L++E M G + P Y+ +I + C+ A L +++V GI PD LT+
Sbjct: 207 DAFQLLQE-MEG--QVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYT 263
Query: 489 SLLICLSQQTTW 500
SL+ + W
Sbjct: 264 SLIRGFCRTGQW 275
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 185/387 (47%), Gaps = 33/387 (8%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA 166
G P YN LI+ CK G + A+ + +++ + P V+F+ LI CK NL
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L + PDV T + ++ LC GR +D E L E
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGR-LDVAEQL------------------FDE 318
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M+++G PN T+ LI C + +DSA++ ++ M G+ + V Y+TL+ GLC G
Sbjct: 319 MQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
++ K++ M G K Y +++ G +E + A+E K M E + V
Sbjct: 379 VNKARKLVDEMR--MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAF 436
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I GFC DG V DA+R +M+E G P+ Y +I YC++ V+ +L+KEM
Sbjct: 437 TALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G+ P T+N +++GLC+QG + A L+E + G P Y+ L++ C+ G
Sbjct: 497 NGHKPGVITYNVLMNGLCKQGQMKNANMLLEA---MLNLGVTPDDITYNILLEGHCKNG- 552
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A LL KG++ DY + SL+
Sbjct: 553 --KAEDLLKLRNEKGLIVDYAYYTSLV 577
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 190/422 (45%), Gaps = 66/422 (15%)
Query: 40 FNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
+ P ++ +N +++ KE I A+ + ++ G++ ++ L+ GLC + +
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIF-NEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
+GF+L M+ + P+ Y+ LIH LCK G++ A L +M++ PN +TF+ LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
C+ + +A+ + + G PD+V +L LC VG V A ++++
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD-------- 387
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
EM G P+ TY LI YC+ G L+SA+++ M +G+ + V +
Sbjct: 388 -----------EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAF 436
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
LI G C GR+ D + L+ M ++ G K
Sbjct: 437 TALISGFCRDGRVRDAERTLREMVEA--GMK----------------------------- 465
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
P ++ I G+C GNV+ + +M G P V+ Y+ L++ C++ +++
Sbjct: 466 ----PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKN 521
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A+ L++ M G P T+N +L G C+ G LKL E +G + +Y+
Sbjct: 522 ANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE------KGLIVDYAYYTS 575
Query: 455 LI 456
L+
Sbjct: 576 LV 577
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 22/306 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P F T+I GL ++R +++ + + + P + ++ ++ L KE +D+A
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G++ + T+ L+ G C + R+ H M + GVKP+ V+YNTL++ LC
Sbjct: 316 F-DEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLC 374
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +AR L+ +M +P+ +T++ LI YCKE +L +A+ + + G V D V
Sbjct: 375 KVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C GRV DA L E E G + G VK G + LKEM
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G P V TYN+L++ C+ G + +A + M G++ + +TY+ L+ G C G+
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKA 554
Query: 288 DDGLKI 293
+D LK+
Sbjct: 555 EDLLKL 560
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 145/272 (53%), Gaps = 17/272 (6%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F E+ G P V YNILI+ +C+ G + A +FN+++ G+ V+++TLI GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK-- 336
+D+G ++ + ME++ RI P Y+ +++GL +E + D A + +M++
Sbjct: 270 KSRNLDEGFRLKKTMEEN------RIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRG 323
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
L P + + I G C ++ A + QM+ G P++V+Y+ L++ C+ V +A
Sbjct: 324 LRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKAR 383
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPL 455
+L+ EM G P T+ T++ G C++G++ +A+++ +G+ G + + ++ L
Sbjct: 384 KLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEI----RKGMNEEGVVLDNVAFTAL 439
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
I C G + A L +MV G+ PD T+
Sbjct: 440 ISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 212/465 (45%), Gaps = 53/465 (11%)
Query: 50 NSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N ++ V V+ + D+A + YRK M + + Y++ IL+K C +++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRK-MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALV 168
G +P+ V +NTL+H LC ++ A +L Y E + A+
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALF----------------GYMVETGFLEAVA 212
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------- 212
L ++ G P V+T ++ LC GRV++A ++ + +G
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
++G K L +ME P+V Y+ +I C+ G A +F++M GI+ N
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEAL 328
TY+ +I G CS GR D ++L+ M + + I+P +N+++ +E + EA
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAE 386
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ +M +FP V + I GFC +DAK FD M P+VV ++ +I Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ +RV E +L++E++ G + +T+NT++ G C N+ A L +E I G
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE---MISHGVC 499
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + + L+ CE + A L + I D + +N ++
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 226/498 (45%), Gaps = 52/498 (10%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKED-IDLARAFY--------------RKKMMASGVQGDD 81
+++ P + FN++L L ED I A A + +M+ G+
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
T+ L+ GLCL RV + L++ M +G+ + V Y T+++ +CK G A +L+S
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
MEE P+ V +S +I CK+ + +A L + G P+V T +++ CS GR
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
DA R L++M + P+V T+N LIS+ + G L A
Sbjct: 347 WSDAQ-------------------RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ ++M I + VTY+++I G C R DD + LM + + +N+++
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTFNTIIDV 441
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
R + DE ++ L+++ + L + I GFC N+ A+ F +MI G P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV- 434
+ + L++ +C+ E++ EA EL + + +N ++ G+C+ V A L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-C 493
+ G+ P Y+ +I C K A++L +M G PD T+N+L+ C
Sbjct: 562 SLPIHGVE----PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 494 LSQQTTWLLLLLLNEMVS 511
L + L++EM S
Sbjct: 618 LKAGEIDKSIELISEMRS 635
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 212/464 (45%), Gaps = 34/464 (7%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
+ V D + +TP + FN++++ L E L A KM+ G+ D TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
G+C LL M+ +KP+ VIY+ +I LCK+G A+ L S+M E
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN T++ +I +C +A LL PDV+T ++ G++ +A ++
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ EM + P+ TYN +I +C+ D A +F+ M
Sbjct: 389 CD-------------------EMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA- 428
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
S + VT++T+I C R+D+G+++L+ E S+ G + YN++++G +
Sbjct: 429 ---SPDVVTFNTIIDVYCRAKRVDEGMQLLR--EISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A + ++M + P + ++ + GFC + +E+A F+ + + V Y+ +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
IH C+ +V EA +L + HG P T+N ++SG C + + A L + M+
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK-MK--D 600
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
G P + Y+ LI+ + G + L+ +M G D T
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 198/417 (47%), Gaps = 37/417 (8%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
T++ G+ + + D A +L+S+ T P + I+++I+D L K+ + +M
Sbjct: 266 TIVNGMCK---MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G+ + +TY ++ G C R D +LL M R + P+ + +N LI + K GK+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L +M P+ VT++ +I +CK +A + F PDVVT +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTI 438
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+++ C R +V G + L+E+ R+G + N TYN LI +CE
Sbjct: 439 IDVYC-------------------RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L++A D+F +M G+ + +T + L+ G C ++++ L++ ++++ SK
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD--T 537
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN +++G+ + ++ DEA + + + P ++ I GFC + DA F +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M + G P+ Y+ LI + + ++ EL+ EM +G+ A T +CR
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDL 63
+ + PD F T+I RA+ +++ ++ +SR + + +N+++ + D ++
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A+ + ++M++ GV D T IL+ G C ++ + +L V++ + ++V YN +I
Sbjct: 486 AQDLF-QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H +CK KV A L + EP+ T++++I +C + + +A VL K G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
PD T ++ G + ++E++ E G G
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 201/417 (48%), Gaps = 26/417 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + V++GL A+ +DV + + R P++ FN+++ L + +
Sbjct: 211 PDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEA 270
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D YA ++ G+C +L M S G+KPN V YNT++ LC
Sbjct: 271 LSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCS 330
Query: 129 NGKVGRARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L+++M + + DVTF+IL+ +C+ + + LLE+ G +PDV+T
Sbjct: 331 AERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVIT 390
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLKEME 228
T V+ C G V +AV +L+ G +KG CR + M
Sbjct: 391 YTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 450
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++GCLPN T+N LI+ C+ G+++ A+++ M ++G S + ++Y T+I GL G+ +
Sbjct: 451 QQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 510
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK- 347
+ L++L +M + +G Y+S+ L RE + D+ ++ ++ R+ D +L
Sbjct: 511 EALELLNVMIN--KGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRS-DAALYN 567
Query: 348 --ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
I C + A F M+ G +PN Y LI E VREA +L+ E+
Sbjct: 568 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 201/441 (45%), Gaps = 35/441 (7%)
Query: 57 VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
V E ++L R K+ + G + D +Y ++KGLC+ R D +L+ M G PN
Sbjct: 194 VDEGVELLR-----KLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNV 248
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK 172
+NTLI LC+NG + +S M E P+ ++ +I CK+ + A +L +
Sbjct: 249 ATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 308
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC 232
S+G P+VV VL+ LCS R +A ++L EM ++ C
Sbjct: 309 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL-------------------AEMFQEDC 349
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
+ T+NIL+ +C+ G++D +++ M G + +TY T+I G C G +D+ +
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+L+ M S G K Y VL GL R + +A E + M + P V + I
Sbjct: 410 LLKNM--SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINF 467
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G VE A QM+ G P+++ Y +I + + EA EL+ M G P
Sbjct: 468 MCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 527
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
++++ S L R+G +++ + R + Y+ +I +LC++ A
Sbjct: 528 TIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD---AALYNAVISSLCKRWETDRAID 584
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
MV G +P+ T+ L+
Sbjct: 585 FFAYMVSNGCMPNESTYTILI 605
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 203/443 (45%), Gaps = 27/443 (6%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V + YTY +++ LC + D +L M RG + + ++ + C+ G A
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
+ + + ++++ A C++ + + LL K SFG PD+V+ VL+ L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
C R D E++ E G R G + L +M GC P++
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
Y +I C+ G + A D+ + M G+ N V Y+T+++GLCS R ++ +L
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
M +E +N ++ + D +E L+QM P + + I GFC +
Sbjct: 344 M--FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G V++A M G PN + Y ++ C+ ER +A EL+ M G LP TF
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT+++ +C++G V A++L+++ + G P YS +I L + G + A LL
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQMLV---NGCSPDLISYSTVIDGLGKAGKTEEALELLNV 518
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M+ KGI P+ + ++S+ LS++
Sbjct: 519 MINKGITPNTIIYSSMASALSRE 541
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 212/480 (44%), Gaps = 63/480 (13%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-EP 145
L++ LC R D + L + G V YN +I C+ G+V AR L + + P
Sbjct: 50 LIRSLCAAGRTADAARAL---DTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVPP 106
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N T+ ++ + C + +AL +L++ G +LE C G AV L
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166
Query: 206 E---------ESG----------EQGRLGK-----------------------VKGGC-- 221
+ +SG EQG + + +KG C
Sbjct: 167 QVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMA 226
Query: 222 -------RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
+ EM R GC PNV T+N LI+ C G+ + + + M G + + Y
Sbjct: 227 KRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMY 286
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
T+I G+C G + IL M G K + YN+VL GL + +EA + L +M
Sbjct: 287 ATIIDGICKDGHHEVANDILSRM--PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEM 344
Query: 335 EKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ D + IL FC +G V+ +QM+E G +P+V+ Y +I+ +C+E V
Sbjct: 345 FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLV 404
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
EA L+K M+ G P ++ VL GLCR A +L+ I +G LP +
Sbjct: 405 DEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS---HMIQQGCLPNPVTF 461
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
+ LI +C+KG + A LL QM+ G PD +++++++ L + T L LLN M++
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 521
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 17/319 (5%)
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL----GKVKGGCR------FLKEMERKGCLP 234
++ ++ LC+ GR DA L+ +G+ + + G CR + P
Sbjct: 47 LSALIRSLCAAGRTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVPP 106
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N TY ++ S C G++ AL V ++M + G + ++ C GG ++ L
Sbjct: 107 NAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRAL 166
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFC 352
Q++ +G N V+ + + DE +E L+++ P V + + G C
Sbjct: 167 QVLH--AKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+ +D + +M+ G PNV ++ LI C+ + E + +M HG P
Sbjct: 225 MAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLR 284
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ T++ G+C+ G+ A ++ R G P Y+ ++K LC ++ A LL
Sbjct: 285 MYATIIDGICKDGHHEVANDILS---RMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M + D +T+N L+
Sbjct: 342 AEMFQEDCPLDDVTFNILV 360
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 23/292 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P D+ F ++ + +++ V++ + + P + + ++++ KE +
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M A G + + +Y I++KGLC R D +L+ M +G PN V +NTLI+ +C
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 469
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +A L+ M P+ +++S +I K AL LL + G P+ +
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTI 529
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ + L GR +++ + ++ + YN +I
Sbjct: 530 IYSSMASALSREGRTDKIIQMFD-------------------SIQDATVRSDAALYNAVI 570
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
SS C+ D A+D F M +G N TY LIRGL S G + + +L
Sbjct: 571 SSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 622
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 224/505 (44%), Gaps = 34/505 (6%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
I+ + I G +A +I+ V+ D +S+ N +N + VL+ DLA +Y +
Sbjct: 11 IYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYY-SQ 69
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G +TY+ + GLC +LLH M++ P+ +N +H L G+
Sbjct: 70 MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129
Query: 132 VGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A ++ + +P+ VT++I+I CK + A+ GF PD
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRL--------GKVKGGCR---------FLKEMERK 230
++ LC +V A E++ + + GR+ + G CR M R
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRN 249
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC P++ TYN+ ++ +C+ +LD A + M+ GI + +Y+ L++G+C G D
Sbjct: 250 GCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKA 309
Query: 291 LKILQLMEDSKEGSKG--RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
L+ +K KG + YN+++ + A + ++M + + P V ++
Sbjct: 310 Y----LLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTI 365
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I F G+ AK+ DQM E G P+ + Y +I C+ +V A + +M G
Sbjct: 366 FIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQG 425
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P +FN +++G C+ V A+ L EE RGS P Y +I L E+
Sbjct: 426 ISPDVISFNALINGFCKCSRVSEAMHLYEEMQ---NRGSYPDEVTYKLIIGGLIEEKKIS 482
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A M+ QM+ KG D +L+
Sbjct: 483 IACMVWGQMMDKGFTLDRAIAQTLI 507
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 185/472 (39%), Gaps = 102/472 (21%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSI---------------------- 152
+ +IY + I K G + +A + +M + N FSI
Sbjct: 8 HRLIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYY 67
Query: 153 -----------------LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
I CK +N LL + +PD+ L LL
Sbjct: 68 SQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVE 127
Query: 196 GRVMDAVEILEESGEQGR----------------LGKVKGGCRFLKEMERKGCLPN---- 235
GR+ A+E+ E+ + GR + K +F ++M KG P+
Sbjct: 128 GRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKAC 187
Query: 236 ------------VD--------------------TYNILISSYCETGVLDSALDVFNDMK 263
VD YN LIS +C G +D A + + M+
Sbjct: 188 GAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMR 247
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+G + VTY+ + C +DD K+L+LME S G + + YN +L G+ + N
Sbjct: 248 RNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERS--GIEPDVYSYNQLLKGICKGNC 305
Query: 324 QDEALEYLKQMEKLFPRA----VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
D+A YL K++P+ V + I FC G+ A + F++M ++G P+VV +
Sbjct: 306 PDKA--YLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTF 363
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
I A+ + A +L+ +MT G P + T++ LC+ G V A + DM
Sbjct: 364 TIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIF-CDM- 421
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +G P ++ LI C+ A L +M +G PD +T+ ++
Sbjct: 422 -VEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLII 472
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 24/290 (8%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKK 71
++ +I G RA I+ + R P L +N L+ E +D A+ K
Sbjct: 222 VYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLL-KL 280
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL-HVMKSRGVKPNSVIYNTLIHSLCKNG 130
M SG++ D Y+Y L+KG+C N + L+ + M +G+ + V YNT+I + CK G
Sbjct: 281 MERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGL-CDVVSYNTIIKAFCKIG 339
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A L +M + P+ VTF+I I A+ + + A LL++ G PD + T
Sbjct: 340 DTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYT 399
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+++ LC G+V A I + EQG + +V +EM+ +
Sbjct: 400 TIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNR 459
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
G P+ TY ++I E + A V+ M G + + TLIRG
Sbjct: 460 GSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRG 509
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 216/485 (44%), Gaps = 54/485 (11%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHV---MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ L+ G C RVGD L V M ++G+ + V YNTL+ C+ G+V AR ++
Sbjct: 172 WNTLIAGYC---RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228
Query: 141 DMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M+E PN T++ I YC+ + + A L E G + DVVT++ ++ LC G
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288
Query: 197 RVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
R +A + E + G + G+ K L EM +G + ++ TY
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ + G D D D +S N VTY LI LC +D+ ++L ME+
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK 408
Query: 301 KEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
ISP ++SV+ G + D+A EY + M++ + P V I GF
Sbjct: 409 S------ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ A + M+ EG N I D L++ Q ++ EA L K+ +G G +
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ GL + G++ TA K +E M R LP + Y+ I LC G F+ A L +
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELM---DRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 475 MVGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLN 532
M G+ PD T+N++++ C +T L LL HE+ + L + N
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL-----------HEMKMSSIKPNLITYN 628
Query: 533 HLAHG 537
L G
Sbjct: 629 TLVAG 633
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 149/598 (24%), Positives = 253/598 (42%), Gaps = 127/598 (21%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
P D + T++ G RA ++ D++ + P++ + + V+E D
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L R +GV D T + L+ GLC R + + L M G PN V Y TL
Sbjct: 261 LYEGMVR-----NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTL 315
Query: 123 IHSLCKNGK-----------VGRA----------------------------RSLMSDME 143
I SL K G+ V R R +SD
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375
Query: 144 EPNDVTFSILICAYCKEENLVNA----LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
PN VT+++LI A CK N+ A L + EKS S P+VVT + V+ G
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS----PNVVTFSSVINGFVKRG--- 428
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+L+++ E R+ M+ +G PNV TY LI + + D+AL+V+
Sbjct: 429 ----LLDKATEYKRM------------MKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+DM +G+ N D+L+ GL G+I++ + + + + S G Y +++ GL+
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK--DASGSGLSLDHVNYTTLIDGLF 530
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ A ++ +++ + P AV ++ I C+ G ++AK +M G P+
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQS 590
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ +I ++C++ +A +L+ EM P T+NT+++GL G V A L+ E
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE- 649
Query: 438 MRGIGRGSLPGS-GH----------------------------------YSPLIKALCEK 462
+ G P S H Y+ L++ LC
Sbjct: 650 --MVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHE 518
G + A+++L +M+G GI PD +T+N+L++ C S L N ++ ++H+
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH-------LDNAFATYAQMLHQ 758
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 207/496 (41%), Gaps = 64/496 (12%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M A G+ D Y L+ G C +V +L +MK GV PN Y I C+
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253
Query: 131 KVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V A L M + VT S L+ C++ A L + G P+ VT
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC 313
Query: 187 KVLELLCSVGR----------------VMDAV---EILEESGEQGRLGKVKGGCRF---- 223
+++ L GR VMD V +++ G+QG+ +VK RF
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373
Query: 224 ----------------------------LKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
L EME K PNV T++ +I+ + + G+LD A
Sbjct: 374 NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ MK GI+ N VTY TLI G D L++ M EG K +S++
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM--LCEGVKVNKFIVDSLV 491
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL + + +EA+ K L V+ + I G G++ A + ++++ +
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ V+Y+ I+ C + +EA + EM G P ST+NT++ CR+G ALKL
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 434 VEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ E M I P Y+ L+ L G + A LL +MV G P LT +L
Sbjct: 612 LHEMKMSSIK----PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Query: 493 CLSQQTTWLLLLLLNE 508
SQ ++L ++E
Sbjct: 668 ACSQSRRLDVILDIHE 683
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 219/522 (41%), Gaps = 61/522 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I L +A +++ + + +++P++ F+S+++ VK + Y
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M G+ + TY L+ G ++ H M GVK N I ++L++ L +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NGK+ A +L D + V ++ LI K ++ A ++ +PD V
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ LC LGK K FL EM G P+ TYN +I
Sbjct: 557 YNVFINCLC-------------------MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-------------- 290
S+C G AL + ++MK+ I N +TY+TL+ GL G ++
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 291 -----LKILQLMEDSKE--------------GSKGRISPYNSVLYGLYRENQQDEALEYL 331
++LQ S+ G I+ YN++L L +A L
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
++M + P + + ILG C ++++A + QM+ + PN+ ++ L+
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R+ EA ++ EM G P T++ + +G +Q N A++L E +G+G +P
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCE---MVGKGFVPKV 834
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI + G A L M +G+ P T++ L+
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 198/431 (45%), Gaps = 32/431 (7%)
Query: 49 FNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+ +++D L K D+ AF + +++M + D Y + + LC+ + + L M
Sbjct: 522 YTTLIDGLFKAG-DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
++ G+KP+ YNT+I S C+ G+ +A L+ +M+ +PN +T++ L+ +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A LL + S GF P +T +VL+ CS R +D + + E
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQA-CSQSRRLDVILDIHE---------------- 683
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M G ++ YN L+ C G+ A V +M GI+ + +T++ LI G C
Sbjct: 684 --WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCK 741
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
+D+ M + I+ +N++L GL + EA L +MEK L P
Sbjct: 742 SSHLDNAFATYAQM--LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + G N +A R + +M+ +G VP V Y+ LI + + + +A EL K+
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G P + T++ ++SG R N GT +K +DM+ +G P G S + +A +
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRN-GTEVKKCLKDMK--EKGFSPSKGTLSFICRAFSK 916
Query: 462 KGGFQSASMLL 472
G A LL
Sbjct: 917 PGMTWQAQRLL 927
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 175/406 (43%), Gaps = 41/406 (10%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM---SDMEEPNDVTFSILICAYCK 159
+L M RGV + V NTL+ LC+NG+V A +L + + + ++ LI YC+
Sbjct: 122 VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCR 181
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ AL + ++ + G DVV ++ C G+V A +L+
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDM------------ 229
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
M+ G PNV TY I YC T ++ A D++ M +G+ + VT L+
Sbjct: 230 -------MKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
GLC GR + + + M+ K G+ Y +++ L + + E L L +M
Sbjct: 283 GLCRDGRFSEAYALFREMD--KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM---VS 337
Query: 340 RAVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
R V L +D G ++ K + + PN V Y LI A C+ V E
Sbjct: 338 RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDE 397
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSGH 451
A +++ EM P TF++V++G ++G + A ++++E RG P
Sbjct: 398 AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE------RGINPNVVT 451
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y LI + G +A + M+ +G+ + +SL+ L Q
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 33/328 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLAR 65
PD+S + T+I R + KA L+ M+ P+L +N+++ L
Sbjct: 587 PDQSTYNTMIVSHCRK---GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M+++G T+ +++ + R+ + M + G+ + +YNTL+
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G +A ++ +M P+ +TF+ LI +CK +L NA + P+
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763
Query: 182 VVTITKVLELLCSVGRVMDAVEIL---EESGEQ-------------GRLGKVKGGCRFLK 225
+ T +L L SVGR+ +A +L E+SG + G+ R
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM KG +P V TYN LIS + + G++ A ++F DM+ G+ TYD L+ G
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW---S 880
Query: 286 RIDDGLKILQLMEDSKEG----SKGRIS 309
RI +G ++ + ++D KE SKG +S
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLS 908
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 13/267 (4%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P YNIL+++ + A V +M G+ ++ VT +TL+ GLC G++D
Sbjct: 101 PTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA--- 154
Query: 294 LQLMEDSKEGSKG-RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ D G + +N+++ G R AL +M + L V + + G
Sbjct: 155 -AALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC G V+ A+ D M E G PNV Y I YC+ + V EA +L + M +G L
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T + +++GLCR G A L E M + G+ P Y LI +L + G +
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFRE-MDKV--GAAPNHVTYCTLIDSLAKAGRGKELLS 330
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQ 497
LL +MV +G++ D +T+ +L+ L +Q
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMDWLGKQ 357
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 222/520 (42%), Gaps = 58/520 (11%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ ++ T+ +M C VG ++L VM+ G PN V YN L++ L G+
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
RA+ L+ M + + T++ LI +CK+E A L + G +P VVT
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNT 317
Query: 188 VLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERKG 231
++ LC +GRV DA L+ + RLG E+ K
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI---- 287
+P+V TYN LI C TG LD A + +DM G+ + VT+ L+RG C G +
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAK 437
Query: 288 -------DDGLKI------------LQLMEDSK----------EGSKGRISPYNSVLYGL 318
GLK L+L SK EG + YN ++ GL
Sbjct: 438 ELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGL 497
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+ D+A E +++M E + P V + I + G + A+ F M+++G P+V
Sbjct: 498 CKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV 557
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y LIH+Y R+ A + EM G P T+N ++ GLC++ + A L E
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+G P Y+ LI +Q A L M+ + I PD T ++L+ LS+
Sbjct: 618 ME---SKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSK 674
Query: 497 QTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAH 536
L +L L + ++ ++ E KL + +H
Sbjct: 675 DYKLLAVLRLENLPLAIVEINSTWIAEGFVKLEESKNNSH 714
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 164/347 (47%), Gaps = 40/347 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLA 64
PD + T+I G R + + +A L S N+ PS+ +N+++D + ++D+A
Sbjct: 345 PDLVSYNTLIYGYSR---LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIA 401
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + M+ G+ D T+ IL++G C + +L M SRG+KP+ + Y T I
Sbjct: 402 KGM-KDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIV 460
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
K G +A + +M+ P+ +T+++LI CK N +A L++K G VP
Sbjct: 461 GELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVP 520
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D VT T ++ G + A E+ + M +KG P+V TY
Sbjct: 521 DHVTYTSIIHAHLISGLLRKAEEVFSD-------------------MLKKGIHPSVVTYT 561
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+LI SY G LD A F++M+ G+S N +TY+ LI GLC +D + ME
Sbjct: 562 VLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEME-- 619
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
SKG +SP L EN L+Y + KL+ +DR +K
Sbjct: 620 ---SKG-VSPNKYTYTILINENSN---LQYWQDALKLYKDMLDREIK 659
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 150/315 (47%), Gaps = 27/315 (8%)
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN----VDTYNILI 243
+L++L G + A ++E++ E KV GG L + GC N V ++LI
Sbjct: 91 ILDILAKNGFMKPAYWVMEKAIEV----KVDGGV--LDVLVGIGCGRNSEVSVKLLDLLI 144
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + +L+ L VF M +G+ + + +++ L +++ ++ +M K
Sbjct: 145 QVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVM--IKCQ 202
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF---PRAVDRSLKILGFCVDGNVEDA 360
+ I +N+++ +E + A+E L M ++F P V ++ + G G + A
Sbjct: 203 IRPTIVTFNTMMDSRCKEGEVGRAVEVLDVM-RMFGCDPNDVSYNVLVNGLSGKGEFDRA 261
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K +QM G + Y+ LI +C++E EA++L +EM G G LP T+NT++
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321
Query: 421 LCRQGNVGTALK----LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
LCR G V A + +V ED+ +P Y+ LI G F A +L ++
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDL-------MPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 477 GKGILPDYLTWNSLL 491
K ++P +T+N+L+
Sbjct: 375 SKNLVPSVVTYNTLI 389
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 219/483 (45%), Gaps = 32/483 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
VIR LG A+MI + + P+ + +NS++ +L+ E + Y +
Sbjct: 165 VIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG 224
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
Q D TY+ L+ C R +LL+ MK G++P + IY +I K V A
Sbjct: 225 HCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
SL +M P+ T++ LI K + A + G PD V + ++
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINF 344
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET-G 250
L GR+ D +++ EE G C+PNV TYN +I + E+
Sbjct: 345 LGKAGRLDDGLKLFEEMGVS-------------------HCIPNVVTYNTIIKALFESKS 385
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ F MK GIS + TY LI G C RI+ + +L+ M++ +G +
Sbjct: 386 RVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE--KGFPPCPAA 443
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR--SLKILGFCVDGNVEDAKRCFDQMI 368
Y S++ L + + D A E +++++ + R ++ I G ++DA FD+M
Sbjct: 444 YCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMS 503
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G PNV Y+ L+ + + EA M++M HG LP +++N +L+GL + G
Sbjct: 504 KLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPH 563
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A++++ + P + Y+ ++ AL G F+ A+ L+ +M G D +T++
Sbjct: 564 RAMEMLTNMKNSTIK---PDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYS 620
Query: 489 SLL 491
S+L
Sbjct: 621 SIL 623
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 192/427 (44%), Gaps = 35/427 (8%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPNDVTFS 151
+G + + +K+R +P + YN++I L G+ + L ++M +P+ VT+S
Sbjct: 175 IGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYS 234
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI A+CK +A+ LL + G P T ++ L + V A+ + EE
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYM 294
Query: 212 ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G+ G++ F EM+R+GC P+ N +I+ + G LD
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDG 354
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLC-SGGRIDDGLKILQLMEDSKEGSKGRISP--YN 312
L +F +M + N VTY+T+I+ L S R+ + + M+ GS SP Y+
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMK----GSGISPSPFTYS 410
Query: 313 SVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVED-AKRCFDQMIEE 370
++ G + N+ ++A+ L++M EK FP ++ D A F ++ E
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + +Y +I + R+ +A L EM+ G P +N ++SGL R + A
Sbjct: 471 CGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEA 530
Query: 431 LKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
L MR + G LP Y+ ++ L + GG A +L M I PD +++N+
Sbjct: 531 LT----TMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 490 LLICLSQ 496
+L LS
Sbjct: 587 VLSALSH 593
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 189/421 (44%), Gaps = 30/421 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I + + ++ + + M P+ KI+ I+ + K +++ A +
Sbjct: 228 PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSL 287
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M + D +TY L++GL R+ + + H M+ G KP++V+ N +I+ L
Sbjct: 288 F-EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLG 346
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALV-LLEKSFSFGFVPDV 182
K G++ L +M PN VT++ +I A + ++ V+ + E+ G P
Sbjct: 347 KAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSP 406
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T + +++ C R+ A+ +LEE M+ KG P Y L
Sbjct: 407 FTYSILIDGFCKTNRIEKAMMLLEE-------------------MDEKGFPPCPAAYCSL 447
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + + D A ++F ++K + S + Y +I+ L GR+DD + + M SK
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM--SKL 505
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+++ GL R DEAL +++M++ P ++ + G G A
Sbjct: 506 GCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRA 565
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M P+ V Y+ ++ A EA+ELMKEM G+ T++++L
Sbjct: 566 MEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Query: 421 L 421
+
Sbjct: 626 I 626
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 156/321 (48%), Gaps = 26/321 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + +I LG+A ++D +K + + + P++ +N+I+ L + ++ F
Sbjct: 333 PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFS 392
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M SG+ +TY+IL+ G C TNR+ LL M +G P Y +LI +L
Sbjct: 393 WFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 452
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + A L +++E + ++++I K L +A+ L ++ G P+V
Sbjct: 453 KAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ L + +A+ +++M+ GCLP++++YNI++
Sbjct: 513 AYNALMSGLARACMLDEALTT-------------------MRKMQEHGCLPDINSYNIIL 553
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +TG A+++ +MK I + V+Y+T++ L G ++ ++++ M + G
Sbjct: 554 NGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM--NALG 611
Query: 304 SKGRISPYNSVLYGLYRENQQ 324
+ + Y+S+L + + +Q+
Sbjct: 612 FEYDLITYSSILEAIGKVDQE 632
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 10/305 (3%)
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
M+ +++ G +GK +++ + C P YN +I G + ++
Sbjct: 160 MELSQVIRMLGNAKMIGK---AITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216
Query: 259 FNDMKIDG-ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+N+M +G + VTY LI C GR D +++L M+++ +I Y ++
Sbjct: 217 YNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI--YTMIISL 274
Query: 318 LYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
++ + AL ++M ++ P + I G G +++A + +M EG P+
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPD 334
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V+ + +I+ + R+ + +L +EM +P T+NT++ L + + +
Sbjct: 335 TVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWF 394
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
E M+G G P + YS LI C+ + A MLL +M KG P + SL+ L
Sbjct: 395 ERMKGSGISPSPFT--YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 452
Query: 496 QQTTW 500
+ +
Sbjct: 453 KAKRY 457
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 216/476 (45%), Gaps = 27/476 (5%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS + + S++ VK+ ++ +M++ G+ + L+ G C N +G L
Sbjct: 301 PSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDL 360
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
+ M++ G PNSV ++ LI KNG++ +A ME P+ +I + K
Sbjct: 361 FYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLK 420
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK- 218
+ AL L ++SF G +V +L LC G++ A E+L + +G V
Sbjct: 421 GQKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVS 479
Query: 219 ------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
CR M KG PN TY+ILI + + L+V N M
Sbjct: 480 YNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMT 539
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
I N V Y T+I GLC G+ ++L M + K +S YNS++ G +E +
Sbjct: 540 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMS-YNSIIDGFIKEGE 598
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
D A+ ++M + P + + + G C + ++ A D+M +G ++ Y
Sbjct: 599 MDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 658
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LIH +C++ + AS L E+ G P +N+++SG GN+ AL L ++ ++
Sbjct: 659 LIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDG 718
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
R L G Y+ LI L ++G AS L +M G++PD + + ++ LS++
Sbjct: 719 LRCDL---GTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKK 771
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 226/490 (46%), Gaps = 41/490 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKM 72
F ++ + R + V + + + P + N L LV+ + I A+ Y +M
Sbjct: 165 FNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELY-SRM 223
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+A GV GD+ T +LM+ + + ++ RG +P+S++Y+ + + CK +
Sbjct: 224 VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNL 283
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A SL+ +M+E P+ T++ +I A K+ N+ +A+ ++ S G +VV T
Sbjct: 284 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATS 343
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C + A+++ F K ME +G PN T+++LI +
Sbjct: 344 LITGHCKNNDLGSALDL------------------FYK-MENEGPSPNSVTFSVLIERFS 384
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G ++ AL+ + M+ G++ + T+I+G G + ++ LK L ++S E
Sbjct: 385 KNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALK---LFDESFETGLAN 441
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ N++L L ++ + D+A E L++ME + P V + +L C N++ A+ F
Sbjct: 442 VFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFS 501
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M+E+G PN Y LI + + E++ +MT + T+++GLC+ G
Sbjct: 502 NMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVG 561
Query: 426 NVGTALKL----VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
A +L +EE + S Y+ +I ++G A +M GI
Sbjct: 562 QTSKARELLANMIEEKRFCVSCMS------YNSIIDGFIKEGEMDYAVAAYEEMCANGIS 615
Query: 482 PDYLTWNSLL 491
P+ +T+ SL+
Sbjct: 616 PNVITYTSLM 625
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 198/411 (48%), Gaps = 29/411 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ LC ++ +LL M+SRG+ PN V YN ++ + C+ + AR++ S+M E
Sbjct: 448 ILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKG 507
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
PN+ T+SILI K + N L ++ + S + V ++ LC VG+ A
Sbjct: 508 LKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 567
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+L E+ R C C+ +YN +I + + G +D A+ + +M
Sbjct: 568 ELLANMIEEKRF------C--------VSCM----SYNSIIDGFIKEGEMDYAVAAYEEM 609
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+GIS N +TY +L+ GLC R+D L++ M++ +G K I Y ++++G +++
Sbjct: 610 CANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKN--KGVKLDIPAYGALIHGFCKKS 667
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ A ++ E L P + I GF GN+ A + +M+++G ++ Y
Sbjct: 668 NMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 727
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI +E + AS+L EM G +P + +++GL ++G +K+ EE +
Sbjct: 728 TLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKN 787
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I +G A L +M+ KGILPD T++ L+
Sbjct: 788 ---NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 835
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 207/400 (51%), Gaps = 33/400 (8%)
Query: 32 KATDLVSRFN---MTPSLKIFNSI-LDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL 87
KAT+L+ + + P++ +N++ L K+++DLAR + M+ G++ ++YTY+IL
Sbjct: 460 KATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVF-SNMLEKGLKPNNYTYSIL 518
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND 147
+ G + + ++++ M S ++ N V+Y T+I+ LCK G+ +AR L+++M E
Sbjct: 519 IDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 578
Query: 148 -----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
++++ +I + KE + A+ E+ + G P+V+T T +++ LC R+ A+
Sbjct: 579 FCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQAL 638
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+ +E M+ KG ++ Y LI +C+ ++SA +F+++
Sbjct: 639 EMRDE-------------------MKNKGVKLDIPAYGALIHGFCKKSNMESASALFSEL 679
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+G++ + Y++LI G + G + L + + M K+G + + Y +++ GL +E
Sbjct: 680 LEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKM--LKDGLRCDLGTYTTLIDGLLKEG 737
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
A + +M+ L P + ++ + G G + F++M + PNV+IY+
Sbjct: 738 NLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 797
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+I + +E + EA L EM G LP +TF+ ++SG
Sbjct: 798 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 142/295 (48%), Gaps = 33/295 (11%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKI------FNSILDVLVKE-DIDLAR 65
++ T+I GL + + KA +L++ NM + +NSI+D +KE ++D A
Sbjct: 549 VYQTIINGLCK---VGQTSKARELLA--NMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAV 603
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A Y ++M A+G+ + TY LM GLC NR+ ++ MK++GVK + Y LIH
Sbjct: 604 AAY-EEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHG 662
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK + A +L S++ E P+ ++ LI + N+V AL L +K G D
Sbjct: 663 FCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 722
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
+ T T +++ L G ++ A ++ E G + G+ + +
Sbjct: 723 LGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFE 782
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
EM++ PNV YN +I+ + G LD A + ++M GI + T+D L+ G
Sbjct: 783 EMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 131/330 (39%), Gaps = 75/330 (22%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY-DTLIRGLCSGGRIDDGLKI 293
N +N L+++Y + D A+D+ N M G+ FV Y + + L I + ++
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGV-IPFVPYVNRTLSALVQRNSITEAKEL 219
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEK-------LFPRAVD-- 343
M G G ++ RE + EALE + + +E+ L+ AV
Sbjct: 220 YSRM--VAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQAC 277
Query: 344 -------------RSLKILGFCV---------------DGNVEDAKRCFDQMIEEGGVPN 375
R +K CV GN+EDA R D+M+ +G N
Sbjct: 278 CKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMN 337
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VV LI +C+ + A +L +M G P + TF+ ++ + G + AL+ +
Sbjct: 338 VVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYK 397
Query: 436 EDMRGIG------------RGSLPGSGHYSPL--------------------IKALCEKG 463
+ M +G +G L G H L + LC++G
Sbjct: 398 K-MESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQG 456
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
A+ LL +M +GI P+ +++N++++
Sbjct: 457 KIDKATELLRKMESRGIGPNVVSYNNVMLA 486
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PDE ++ ++ GL + VVK + + + N+TP++ I+N+++ +E +L AF
Sbjct: 756 PDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG-NLDEAFR 814
Query: 68 YRKKMMASGVQGDDYTYAILMKG 90
+M+ G+ D T+ IL+ G
Sbjct: 815 LHDEMLDKGILPDGATFDILVSG 837
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 217/485 (44%), Gaps = 54/485 (11%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHV---MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ L+ G C RVGD L V M ++G+ + V YNTL+ C+ G+V AR ++
Sbjct: 172 WNTLIAGYC---RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228
Query: 141 DMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M+E PN T++ I YC+ + + A L E G + DVVT++ ++ LC G
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288
Query: 197 RVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
R +A + E + G + G+ K L EM +G + ++ TY
Sbjct: 289 RFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ + G D D D +S N VTY LI LC +D+ ++L ME+
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK 408
Query: 301 KEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
ISP ++SV+ G + D+A EY + M++ + P V I GF
Sbjct: 409 S------ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ A + M+ EG N I D L++ Q ++ EA L K+ +G G +
Sbjct: 463 QGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ GL + G++ TA K +E M R LP + Y+ I LC G F+ A +L +
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELM---DRNMLPDAVVYNVFINCLCILGKFKEAKSILTE 579
Query: 475 MVGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLN 532
M G+ PD T+N++++ C +T L LL HE+ + L + N
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL-----------HEMKMSSIKPNLITYN 628
Query: 533 HLAHG 537
L G
Sbjct: 629 TLVAG 633
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 148/598 (24%), Positives = 252/598 (42%), Gaps = 127/598 (21%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
P D + T++ G RA ++ D++ + P++ + + V+E D
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L R +GV D T + L+ GLC R + + L M G PN V Y TL
Sbjct: 261 LYEGMVR-----NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTL 315
Query: 123 IHSLCKNGK-----------VGRA----------------------------RSLMSDME 143
I SL K G+ V R R +SD
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375
Query: 144 EPNDVTFSILICAYCKEENLVNA----LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
N VT+++LI A CK N+ A L + EKS S P+VVT + V+ G
Sbjct: 376 SLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS----PNVVTFSSVINGFVKRG--- 428
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+L+++ E R+ M+ +G PNV TY LI + + D+AL+V+
Sbjct: 429 ----LLDKATEYKRM------------MKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+DM +G+ N D+L+ GL G+I++ + + + + S G Y +++ GL+
Sbjct: 473 HDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFK--DASGSGLSLDHVNYTTLIDGLF 530
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ A ++ +++ + P AV ++ I C+ G ++AK +M G P+
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQS 590
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ +I ++C++ +A +L+ EM P T+NT+++GL G V A L+ E
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE- 649
Query: 438 MRGIGRGSLPGS-GH----------------------------------YSPLIKALCEK 462
+ G P S H Y+ L++ LC
Sbjct: 650 --MVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHE 518
G + A+++L +M+G GI PD +T+N+L++ C S L N ++ ++H+
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH-------LDNAFATYAQMLHQ 758
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 200/431 (46%), Gaps = 32/431 (7%)
Query: 49 FNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+ +++D L K D+ AF + +++M + D Y + + LC+ + + +L M
Sbjct: 522 YTTLIDGLFKAG-DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEM 580
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
++ G+KP+ YNT+I S C+ G+ +A L+ +M+ +PN +T++ L+ +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A LL + S GF P +T +VL+ CS R +D + + E
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQA-CSQSRRLDVILDIHE---------------- 683
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M G ++ YN L+ C G+ A V +M GI+ + +T++ LI G C
Sbjct: 684 --WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCK 741
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
+D+ M + I+ +N++L GL + EA L +MEK L P
Sbjct: 742 SSHLDNAFATYAQM--LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + + G N +A R + +M+ +G VP V Y+ LI + + + +A EL K+
Sbjct: 800 LTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G P + T++ ++SG R N GT +K +DM+ +G P G S + +A +
Sbjct: 860 MQKRGVHPTSCTYDILVSGWSRIRN-GTEVKKCLKDMK--EKGFSPSKGTLSFICRAFSK 916
Query: 462 KGGFQSASMLL 472
G A LL
Sbjct: 917 PGMTWQAQRLL 927
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/500 (23%), Positives = 223/500 (44%), Gaps = 27/500 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ +I L +A +++ + + +++P++ F+S+++ VK + Y++ M
Sbjct: 382 YTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + TY L+ G ++ H M GV+ N I ++L++ L +NGK+
Sbjct: 442 ERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIE 501
Query: 134 RARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A +L D + V ++ LI K ++ A ++ +PD V +
Sbjct: 502 EAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFI 561
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
LC +G+ +A IL E G R G+ + L EM+
Sbjct: 562 NCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIK 621
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN+ TYN L++ TG ++ A + N+M G S + +T+ +++ R+D L I
Sbjct: 622 PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDI 681
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
+ M ++ G I+ YN++L L +A L++M + P + + ILG
Sbjct: 682 HEWMMNA--GLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGH 739
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C ++++A + QM+ + PN+ ++ L+ R+ EA ++ EM G P
Sbjct: 740 CKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T++ +++G +Q N A++L E +G+G +P Y+ LI + G A L
Sbjct: 800 LTYDILVTGHGKQSNKVEAMRLYCE---MVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Query: 472 LVQMVGKGILPDYLTWNSLL 491
M +G+ P T++ L+
Sbjct: 857 FKDMQKRGVHPTSCTYDILV 876
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 33/328 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLAR 65
PD+S + T+I R + KA L+ M+ P+L +N+++ L
Sbjct: 587 PDQSTYNTMIVSHCRK---GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M+++G T+ +++ + R+ + M + G+ + +YNTL+
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G +A ++ +M P+ +TF+ LI +CK +L NA + P+
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763
Query: 182 VVTITKVLELLCSVGRVMDAVEIL---EESGEQ-------------GRLGKVKGGCRFLK 225
+ T +L L SVGR+ +A +L E+SG + G+ R
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYC 823
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM KG +P V TYN LIS + + G++ A ++F DM+ G+ TYD L+ G
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW---S 880
Query: 286 RIDDGLKILQLMEDSKEG----SKGRIS 309
RI +G ++ + ++D KE SKG +S
Sbjct: 881 RIRNGTEVKKCLKDMKEKGFSPSKGTLS 908
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 174/406 (42%), Gaps = 41/406 (10%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM---SDMEEPNDVTFSILICAYCK 159
+L M RGV + V NTL+ LC+NG+V A +L + + + ++ LI YC+
Sbjct: 122 VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCR 181
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ AL + ++ + G DVV ++ C G+V A +L+
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDM------------ 229
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
M+ G PNV TY I YC T ++ A D++ M +G+ + VT L+
Sbjct: 230 -------MKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
GLC GR + + + M+ K G+ Y +++ L + + E L L +M
Sbjct: 283 GLCRDGRFSEAYALFREMD--KVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEM---VS 337
Query: 340 RAVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
R V L +D G ++ K + + N V Y LI A C+ V E
Sbjct: 338 RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDE 397
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSGH 451
A +++ EM P TF++V++G ++G + A ++++E RG P
Sbjct: 398 AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE------RGINPNVVT 451
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y LI + G +A + M+ +G+ + +SL+ L Q
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQN 497
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 13/267 (4%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P YNIL+++ + A V +M G+ ++ VT +TL+ GLC G++D
Sbjct: 101 PTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA--- 154
Query: 294 LQLMEDSKEGSKG-RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ D G + +N+++ G R AL +M + L V + + G
Sbjct: 155 -AALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC G V+ A+ D M E G PNV Y I YC+ + V EA +L + M +G L
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T + +++GLCR G A L E M + G++P Y LI +L + G +
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFRE-MDKV--GAVPNHVTYCTLIDSLAKAGRGKELLS 330
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQ 497
LL +MV +G++ D +T+ +L+ L +Q
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMDWLGKQ 357
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 188/391 (48%), Gaps = 24/391 (6%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++A G++ D +Y L+ G+C KL+ + R KPN +YNT+I +LC
Sbjct: 151 FHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC 210
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V A L S+M + VT++ LI +C L A+ LL + P+V
Sbjct: 211 KYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVY 270
Query: 184 TITKVLELLCSVGRVMDAVEILE--------------ESGEQGR--LGKVKGGCRFLKEM 227
T +++ LC G+V +A +L + G + ++K M
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM 330
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P+V +Y ILI+ +C+ ++D AL++F +M + VTY +LI GLC GRI
Sbjct: 331 SLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
++ M D G + YNS++ GL + D A+ +M+ R +
Sbjct: 391 SYVWDLIDEMRD--RGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFT 448
Query: 348 IL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
IL G C G ++DA+ F ++ +G +V Y+ +I+ +C++ + EA ++ +M +
Sbjct: 449 ILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEEN 508
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
G +P A TF+ +++ L ++ A KL+ +
Sbjct: 509 GCVPNAVTFDIIINALFKKDENDKAEKLLRQ 539
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 207/414 (50%), Gaps = 45/414 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARA 66
D+ + T+I G+ + I D A LV + + P+++++N+I+D L K +
Sbjct: 163 DQVSYGTLINGVCK---IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+M A G+ D TY L+ G C+ +++ + LL+ M + + PN YN L+ +L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYC------KEENLVNALVLLEKSFSF 176
CK GKV A+++++ M +P+ +T+S L+ Y K +++ NA+ L+
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLM------ 333
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PDV + T ++ C V +A+ + KEM +K +P +
Sbjct: 334 GVTPDVHSYTILINGFCKNKMVDEALNLF-------------------KEMHQKNMVPGI 374
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY+ LI C++G + D+ ++M+ GI N +TY++LI GLC G +D + +
Sbjct: 375 VTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK 434
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLFPRAVDR-SLKILGFCVD 354
M+D +G + + +L GL + + +A E + + K + V + ++ I G C
Sbjct: 435 MKD--QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQ 492
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G +E+A +M E G VPN V +D +I+A +++ +A +L+++M G L
Sbjct: 493 GLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 210/469 (44%), Gaps = 36/469 (7%)
Query: 35 DLVSRFN------MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D VS+FN TP + FN ILD K ++ G+Q D T IL+
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEE 144
C ++ GF +L + RG +P+++ + TLI LC G+V +A L++ +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIK 161
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+ V++ LI CK + A+ L+ K P+V +++ LC V +A +
Sbjct: 162 FDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGL 221
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
EM KG +V TY LI +C L A+ + N+M +
Sbjct: 222 FS-------------------EMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL 262
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
I+ N TY+ L+ LC G++ + +L +M K K + Y++++ G + +
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKNVLAVM--LKACVKPDVITYSTLMDGYFLVYEL 320
Query: 325 DEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+A M + P ++ I GFC + V++A F +M ++ VP +V Y L
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I C+ R+ +L+ EM G T+N+++ GLC+ G++ A+ L + M+
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNK-MK--D 437
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P S ++ L+ LC+ G + A ++ KG D +N ++
Sbjct: 438 QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMI 486
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 111/263 (42%), Gaps = 58/263 (22%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G + +M+++ + + + NM P + ++S++D
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID-------------- 382
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
GLC + R+ + L+ M+ RG+ N + YN+LI LCK
Sbjct: 383 ---------------------GLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCK 421
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NG + RA +L + M++ P TF+IL+ CK L +A + + G+ DV
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYK 481
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C G + +A+ +L +ME GC+PN T++I+I+
Sbjct: 482 YNVMINGHCKQGLLEEALTMLS-------------------KMEENGCVPNAVTFDIIIN 522
Query: 245 SYCETGVLDSALDVFNDMKIDGI 267
+ + D A + M G+
Sbjct: 523 ALFKKDENDKAEKLLRQMICRGL 545
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 211/458 (46%), Gaps = 30/458 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ D Y Y IL+ + R D LH+M G KP+ + ++T+I + C G V AR
Sbjct: 310 EPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARK 369
Query: 138 LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
+ ++E PN ++ L+ Y K ++ A +L E+ G PD T ++
Sbjct: 370 IFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNY 429
Query: 194 SVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVD 237
G+ D+ E+ + + G++ +FL++M KG P+V
Sbjct: 430 KYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVV 489
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+N +I++Y G D+A + M + G+ + T +++ GL GR+ + +L M
Sbjct: 490 AFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKM 549
Query: 298 EDSKEGSKGRISPYNSVLYGLYR--ENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG 355
D +G + +L G ++ + +L Y + + P A+ S I G G
Sbjct: 550 ID--KGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAG 607
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
VE+A F +M ++G VPN +Y+ LIH C ++ EA +L +EM G LP T N
Sbjct: 608 LVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTN 667
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++G C++G + +A E M I G P + Y+ LI C+ SA L +M
Sbjct: 668 IIINGFCKEGRMKSAFDAFAE-MHHI--GVTPDTVTYNTLIGGYCKVLDMVSADEFLNKM 724
Query: 476 VGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVS 511
G PD T+N + C SQ+ + + +L+E+++
Sbjct: 725 YASGWDPDITTYNIRIQGFCSSQKIS-RAVTMLDELIA 761
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 209/467 (44%), Gaps = 31/467 (6%)
Query: 51 SILDVLVKEDIDLARAFYR----KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
SIL+ L++ ++ A+ +M GV+ +IL + L G +KLL
Sbjct: 209 SILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRG 268
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEEN 162
M G +P + +N +I C+ G + A SL+ M EP+ ++ILI AY
Sbjct: 269 MIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGR 328
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR--------- 213
+AL L G P ++T + ++ C+ G V++A +I E E G
Sbjct: 329 TSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNT 388
Query: 214 ----LGKVKGGCR---FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
K + C+ +EM KG P+ T+NIL++ + G + ++F D +
Sbjct: 389 LMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSS 448
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + YD + GLC G++D+ ++ L+ M + +G + +NSV+ R +D
Sbjct: 449 LVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLE--KGMPPSVVAFNSVIAAYSRAGFEDN 506
Query: 327 ALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A + K M L P + S +LG G +++A+ +MI++G N V + L+
Sbjct: 507 AHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLD 566
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
Y + A L EM G P A F+ + GL + G V A + E + +G
Sbjct: 567 GYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSK---KG 623
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+P + Y+ LI LC G A L +M KG+LPD T N ++
Sbjct: 624 FVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIII 670
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/527 (22%), Positives = 235/527 (44%), Gaps = 40/527 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P F T+I + + K + + ++P++ ++N+++ K D+ A
Sbjct: 346 PSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANML 405
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++M G+ D T+ IL+ G + D ++L + P+ +Y+ + LC
Sbjct: 406 Y-EEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLC 464
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G++ A + DM E P+ V F+ +I AY + NA + FG VP
Sbjct: 465 WAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSS 524
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + +L L GR+ +A ++L + ++G ++G G EM
Sbjct: 525 TCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEM 584
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E +G P+ ++ I + G+++ A + F++M G N Y++LI GLC+ G++
Sbjct: 585 EARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKL 644
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+ LK+ + M ++G I N ++ G +E + A + +M + P V +
Sbjct: 645 HEALKLEREMR--QKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYN 702
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+C ++ A ++M G P++ Y+ I +C +++ A ++ E+
Sbjct: 703 TLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAV 762
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G +P T+NT+++ +C + A+ L + ++ +P + L+ C++G
Sbjct: 763 GVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLK---MAFVPNVVTTNVLLSHFCKQGMP 818
Query: 466 QSASMLLVQMVGKGILPDYL-TWNSLLICLSQQTT--------WLLL 503
+ A ++ Q + K + D++ W ++ + +Q T WL+L
Sbjct: 819 EKA-LIWGQKLNKLLRADFIGYWLVYILSMDKQATAGSTKFIYWLML 864
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 150/360 (41%), Gaps = 30/360 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
PP F +VI RA ++ KA ++ F + PS +S+L L K+ + AR
Sbjct: 485 PPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARD 544
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
KM+ G+ + + +L+ G L + M++RG+ P+++ ++ I L
Sbjct: 545 LLY-KMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGL 603
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G V A S+M + PN+ ++ LI C L AL L + G +PD+
Sbjct: 604 SKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDI 663
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T ++ C GR+ A + EM G P+ TYN L
Sbjct: 664 FTTNIIINGFCKEGRMKSAFDAFA-------------------EMHHIGVTPDTVTYNTL 704
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I YC+ + SA + N M G + TY+ I+G CS +I + +L E
Sbjct: 705 IGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLD--ELIAV 762
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDA 360
G YN+++ + + D A+ ++ K+ P V ++ + FC G E A
Sbjct: 763 GVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+F +TL+RG + + L+IL M + G + S + + L R +
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREV--GVRPSSSAISILFRLLLRVGDYGSVWK 264
Query: 330 YLKQMEKLFPRAVDRSLKI--LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
L+ M + PR + + I L FC G + A+ M + P+V Y+ LI+AY
Sbjct: 265 LLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYR 324
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSL 446
R +A + M +G P TF+T+++ C +GNV A K+ E GI G
Sbjct: 325 IRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFE----GIQEVGLS 380
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ + A+ML +M KGI PD T+N L+
Sbjct: 381 PNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILV 425
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 132/497 (26%), Positives = 231/497 (46%), Gaps = 46/497 (9%)
Query: 28 NDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARAFYRKK-----MMASGVQG 79
N + KA ++ F + P+L+ +N ++ + VK+ R F K M + ++
Sbjct: 128 NLLEKAESFLAYFETVGILPNLQTYNILIKISVKK-----RQFVEAKGLLDWMWSKDLKP 182
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D Y+Y ++ G+ + + ++ M RG+ P+ + YN +I K G + + +
Sbjct: 183 DVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIW 242
Query: 140 SDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+ + PN VT++++I CK +L + E+ D+ T + ++ LC
Sbjct: 243 ERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCD 302
Query: 195 VGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDT 238
VG V AVE+ +E ++ R GK+K M ++ C NV +
Sbjct: 303 VGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENC-HNVVS 361
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNI I E ++ A+ V+ ++ G + TY LI GLC G ++ LKIL+ +
Sbjct: 362 YNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAK 421
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----LFPRAVDRSLKILGFCVD 354
D G K Y+S++ GL ++ + DEAL + QM+K L P + + GF
Sbjct: 422 DG--GDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLIN--GFVRA 477
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+E+A F +M +G P VV Y+ LI+ C+ ER +A +KEM + P T+
Sbjct: 478 SKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITY 537
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+ ++ GLC+ + AL L + + +G P ++ L+ LC G + A +L
Sbjct: 538 SLLMDGLCQGKKIDMALNLWRQVLV---KGLEPDVTMHNILMHGLCSAGKIEDALLLYSN 594
Query: 475 MVGKGILPDYLTWNSLL 491
M LP+ +T N+L+
Sbjct: 595 MKQSNCLPNLVTHNTLM 611
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 122/497 (24%), Positives = 218/497 (43%), Gaps = 34/497 (6%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
P SP IF+ ++R L +++ V + +L+ + + ++L K +
Sbjct: 37 PGYTHSP---HIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVLKAYAKSKM 93
Query: 62 -DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ A ++K G + +Y L+ N + L ++ G+ PN YN
Sbjct: 94 PNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYN 153
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI K + A+ L+ M +P+ ++ +I K +LV+AL + ++ F
Sbjct: 154 ILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFER 213
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV+ +++ G + EI E RL VKG C + PNV
Sbjct: 214 GLVPDVMCYNIMIDGFFKRGDYVQGKEIWE------RL--VKGSCVY----------PNV 255
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN++I+ C+ G D +L+++ MK + + TY +LI GLC G +D +++ +
Sbjct: 256 VTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKE 315
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPRAVDRSLKILGFCVDG 355
M K + YN++L G R + E+ E M K V ++ I G +
Sbjct: 316 M--VKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVVSYNIFIRGLFENR 373
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
VE+A ++ + G + Y LIH C+ + +A +++KE G A ++
Sbjct: 374 KVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYS 433
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY-SPLIKALCEKGGFQSASMLLVQ 474
+++ GL +QG V AL +V + + + S H +PLI + A +
Sbjct: 434 SIVDGLSKQGRVDEALGIVHQ----MDKYGCELSPHVCNPLINGFVRASKLEEAICFFRE 489
Query: 475 MVGKGILPDYLTWNSLL 491
M KG P +++N+L+
Sbjct: 490 METKGCSPTVVSYNTLI 506
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 192/421 (45%), Gaps = 26/421 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + + D +TY+ L+ GLC V ++ M R V + V YN L++ C+
Sbjct: 279 ERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRA 338
Query: 130 GKVGRARSLMSDMEEPN---DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
GK+ + L M + N V+++I I + + A+ + E G D T
Sbjct: 339 GKIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYG 398
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC G + A++IL+E+ + G + G+V + +M++
Sbjct: 399 VLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY 458
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC + N LI+ + L+ A+ F +M+ G S V+Y+TLI GLC R D
Sbjct: 459 GCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDA 518
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ M + + K + Y+ ++ GL + + D AL +Q+ + L P ++ +
Sbjct: 519 YSFVKEMLE--KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILM 576
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +EDA + M + +PN+V ++ L+ + AS + M +G+
Sbjct: 577 HGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQ 636
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P ++N L GLC G + + L ++ ++ G LP S + L++A+ + G S
Sbjct: 637 PDIISYNITLKGLCSCGRISDGIALFDDALKN---GILPTSITWYILVRAVLKLGPLDSL 693
Query: 469 S 469
S
Sbjct: 694 S 694
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 168/398 (42%), Gaps = 75/398 (18%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA 166
G KP YN L+++ + + +A S ++ E PN T++ILI K+ V A
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
LL+ +S PDV + V+ + G ++ A+E+ + E
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFD-------------------E 209
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLIRGLCSGG 285
M +G +P+V YNI+I + + G +++ + K + N VTY+ +I GLC G
Sbjct: 210 MFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMG 269
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK------LFP 339
R DE+LE ++M+K LF
Sbjct: 270 RF-------------------------------------DESLEMWERMKKNECEMDLFT 292
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
S I G C GNV+ A + +M++ V +VV Y+ L++ +C+ +++E+ EL
Sbjct: 293 Y----SSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
M + S +N + GL V A+ + E R RGS S Y LI L
Sbjct: 349 VMMGKENCHNVVS-YNIFIRGLFENRKVEEAISVWELLRR---RGSGADSTTYGVLIHGL 404
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C+ G A +L + G D ++S++ LS+Q
Sbjct: 405 CKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQ 442
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
+I G RA + + + + +P++ +N++++ L K + + K+M+
Sbjct: 470 LINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKD 529
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ D TY++LM GLC ++ L + +G++P+ ++N L+H LC GK+ A
Sbjct: 530 WKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDAL 589
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L S+M++ PN VT + L+ K A V+ F GF PD+++ L+ L
Sbjct: 590 LLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGL 649
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
CS GR+ D + + +++ + G LP T+ IL+ + + G L
Sbjct: 650 CSCGRISDGIALFDDA-------------------LKNGILPTSITWYILVRAVLKLGPL 690
Query: 253 DS 254
DS
Sbjct: 691 DS 692
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 238/505 (47%), Gaps = 40/505 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMAS 75
+++GL R V + R ++ P + +N+++ E +L +A +M S
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC-EGKELEKALELANEMKGS 206
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G T+ IL+ C ++ + L MK G++ + V+Y +LI C G++ R
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
++L ++ E P +T++ LI +CK L A + E G P+V T T +++
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC VG+ +A++ L M K PN TYNI+I+ C+ G+
Sbjct: 327 LCGVGKTKEALQPL-------------------NLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A+++ MK + +TY+ L+ GLC+ G +D+ K+L LM + + Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 312 NSVLYGLYRENQQDEALE-YLKQMEKLFPRAVDR---SLKILGFCVDGNVEDAKRCFDQM 367
N++++GL +EN+ +AL+ Y +EKL A DR ++ + G+V A + Q+
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKL--GAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ V N Y +I +C+ + A L+ +M P +N +LS LC++G++
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A +L EE R + P ++ +I + G +SA LLV M G+ PD T+
Sbjct: 546 DQAWRLFEEMQRD---NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 488 NSLLICLSQQTTWLLLLLLNEMVSF 512
+ L+ +L L L+E +SF
Sbjct: 603 SKLI------NRFLKLGYLDEAISF 621
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 142/547 (25%), Positives = 251/547 (45%), Gaps = 63/547 (11%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGL--CLTN--RVGDGFKLLHVMKSRGVKPNSV 117
+LA +FYRK + + D + + + GL C + G F +L +M RG N
Sbjct: 89 ELAFSFYRKML-----ETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
+N L+ LC+N + G+A SL+ +M P+ +++ +I +C+ + L AL L +
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
G +VT +++ C G++ +A+ L+E G G++
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
G E+ +G P TYN LI +C+ G L A ++F M G+ N TY L
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
I GLC G+ + L+ L LM + E YN ++ L ++ +A+E ++ M+K
Sbjct: 324 IDGLCGVGKTKEALQPLNLMIEKDEEPNA--VTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 338 FPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYDCLIHAYCQEERVR 393
R + + IL G C G++++A + M+++ P+V+ Y+ LIH C+E R+
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 394 EA---SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGS 449
+A +L+ E G G T N +L+ + G+V A++L ++ I + S
Sbjct: 442 QALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQ----ISDSKIVRNS 494
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ----TTWLLLLL 505
Y+ +I C+ G A LL +M + P +N LL L ++ W L
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE 554
Query: 506 LN------EMVSF-VMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDR 558
+ ++VSF +M+ L A + ++S L G GL T++ +I+R
Sbjct: 555 MQRDNNFPDVVSFNIMIDGSLKAGD----IKSAESLLVGMSRA--GLSPDLFTYSKLINR 608
Query: 559 RVEIGHV 565
+++G++
Sbjct: 609 FLKLGYL 615
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 151/351 (43%), Gaps = 30/351 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + ++ +L+ + P+ +N I++ L K+ +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNTLIHSL 126
+ M + D+ TY IL+ GLC + + KLL++M S P+ + YN LIH L
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 127 CKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK ++ +A L+ + + VT +IL+ + K ++ A+ L ++ V +
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 183 VTITKVLELLCSVG-------------------RVMDAVEILEESGEQGRLGKVKGGCRF 223
T T +++ C G V D +L ++G L + R
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ---AWRL 551
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM+R P+V ++NI+I + G + SA + M G+S + TY LI
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G +D+ + M DS I +SVL + + D+ E +K++
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHIC--DSVLKYCISQGETDKLTELVKKL 660
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 13/170 (7%)
Query: 331 LKQMEKLFPRAVDR--SLKILG------FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
LK +F +AVD SL G N E A + +M+E N V L
Sbjct: 54 LKNAVSVFQQAVDSGSSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGL 113
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ Y Q + A ++ M G+ N +L GLCR G A+ L+ E MR
Sbjct: 114 LECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE-MR--- 169
Query: 443 RGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R SL P Y+ +I+ CE + A L +M G G +TW L+
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
>gi|356520039|ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 585
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 190/404 (47%), Gaps = 42/404 (10%)
Query: 49 FNSILDVLVKED-IDLA----RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
FN++L +L++ + D+A F RK +M D Y++ I++KG C + GF+L
Sbjct: 170 FNNLLSLLIRSNCFDIAWWVFNEFKRKVVM------DAYSFGIMIKGRCEAGDLMKGFRL 223
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L +++ G N VIY TLI+ CK+G V A+ L M+ N + +L+ + K
Sbjct: 224 LAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTMDRLGLVANHHSCGVLMNGFFK 283
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+ + E G VP+ V+ C+ V A+ + E E+G
Sbjct: 284 QGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGIAYGVIT 343
Query: 213 -------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
R K + + ++ + G PN+ TYNILI+ +C+ G +D+A+ +FN +K +
Sbjct: 344 YNXGGLCRGKKFGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQLKSN 403
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY-----GLYR 320
G+S VTY+TLI G + L +++ ME+ R P + V Y R
Sbjct: 404 GLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE-------RCIPPSKVTYXILIDAFAR 456
Query: 321 ENQQDEALEYLKQMEKL-FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
N + E MEK V S+ I G C++GN+++A + + E PN VIY
Sbjct: 457 LNYTKKTCEMHSLMEKSGLVSDVXHSVLIHGLCMNGNMKEASKLLKSLGELHLEPNSVIY 516
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ +IH YC+E A L EM +P ++F + + LCR
Sbjct: 517 NTMIHGYCKEGSSYRALRLFNEMVHSRMVPNVASFCSTIGLLCR 560
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 176/388 (45%), Gaps = 31/388 (7%)
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV---------M 199
+F I+I C+ +L+ LL FGF +VV T ++ C G V M
Sbjct: 203 SFGIMIKGRCEAGDLMKGFRLLAMLEEFGFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTM 262
Query: 200 DAVEILEESGEQGRL-------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
D + ++ G L G + G + M+ G +PN YN +IS YC ++
Sbjct: 263 DRLGLVANHHSCGVLMNGFFKQGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNARMV 322
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
D AL+VF +M+ GI++ +TY+ GLC G + + +KI+ + +K G I YN
Sbjct: 323 DKALNVFAEMREKGIAYGVITYNX--GGLCRGKKFGEAVKIVH--QVNKVGLSPNIVTYN 378
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ G + D A+ Q++ L P V + I G+ N+ A +M E
Sbjct: 379 ILINGFCDVGKIDTAVRLFNQLKSNGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEER 438
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL-SGLCRQGNVGT 429
P+ V Y LI A+ + ++ E+ M G ++ ++VL GLC GN+
Sbjct: 439 CIPPSKVTYXILIDAFARLNYTKKTCEMHSLMEKSGL--VSDVXHSVLIHGLCMNGNMKE 496
Query: 430 ALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A KL ++ +G L P S Y+ +I C++G A L +MV ++P+ ++
Sbjct: 497 ASKL----LKSLGELHLEPNSVIYNTMIHGYCKEGSSYRALRLFNEMVHSRMVPNVASFC 552
Query: 489 SLLICLSQQTTWL-LLLLLNEMVSFVMV 515
S + L + W LLL + +S ++
Sbjct: 553 STIGLLCRDEKWQEAELLLGQFLSLSLI 580
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 10/269 (3%)
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K L +T+N L+S + D A VFN+ K + + ++ +I+G C G +
Sbjct: 161 KQALHVTNTFNNLLSLLIRSNCFDIAWWVFNEFK-RKVVMDAYSFGIMIKGRCEAGDLMK 219
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL 349
G ++L ++E+ G + Y +++YG + A + M++L A S +L
Sbjct: 220 GFRLLAMLEEF--GFSLNVVIYTTLIYGCCKSGDVRLAKKLFCTMDRLGLVANHHSCGVL 277
Query: 350 --GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
GF G + ++ M G VPN Y+C+I YC V +A + EM G
Sbjct: 278 MNGFFKQGLQREGFXMYENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGI 337
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+N GLCR G A+K+V + + G P Y+ LI C+ G +
Sbjct: 338 AYGVITYNX--GGLCRGKKFGEAVKIVHQVNK---VGLSPNIVTYNILINGFCDVGKIDT 392
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
A L Q+ G+ P +T+N+L+ S+
Sbjct: 393 AVRLFNQLKSNGLSPTLVTYNTLIAGYSK 421
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 136/337 (40%), Gaps = 61/337 (18%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M SG+ + Y Y ++ C V + M+ +G+ + YN LC+
Sbjct: 295 ENMKPSGIVPNAYAYNCVISEYCNARMVDKALNVFAEMREKGIAYGVITYNX--GGLCRG 352
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
K G A ++ + + PN VT++ILI +C + A+ L + S G P +VT
Sbjct: 353 KKFGEAVKIVHQVNKVGLSPNIVTYNILINGFCDVGKIDTAVRLFNQLKSNGLSPTLVTY 412
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ ++ + G +KEME + P+ TY ILI +
Sbjct: 413 NTLI-------------------AGYSKVENLAGALDLVKEMEERCIPPSKVTYXILIDA 453
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ ++ + M+ G+ + V + LI GLC G + + K+L K +
Sbjct: 454 FARLNYTKKTCEMHSLMEKSGLVSD-VXHSVLIHGLCMNGNMKEASKLL------KSLGE 506
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ P NSV+Y + I G+C +G+ A R F+
Sbjct: 507 LHLEP-NSVIY----------------------------NTMIHGYCKEGSSYRALRLFN 537
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+M+ VPNV + I C++E+ +EA L+ +
Sbjct: 538 EMVHSRMVPNVASFCSTIGLLCRDEKWQEAELLLGQF 574
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 180/385 (46%), Gaps = 32/385 (8%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
TY ++ G C RV G +++ M+ RG + P+ Y T+I CK GKV A + +
Sbjct: 149 TYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDE 208
Query: 142 M-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M EPN V ++ LI YC + NL AL + G V T + L G
Sbjct: 209 MLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEG 268
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R +A ++EE GE KG P+ TYNILI+ YC+ G A+
Sbjct: 269 RAAEAHALVEEMGE-------------------KGLAPDAFTYNILINGYCKEGKEKKAM 309
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+F M GI VTY +LI L G + + ++ + + G + + YN+++
Sbjct: 310 KMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFN--DAVRRGIRPDLFMYNALIN 367
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D A E + +MEK + P V + + G C+ G +++A+ ++M + G P
Sbjct: 368 SHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQP 427
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y+ LI Y + +++A ++ EM G G+ P T+N ++ GLC G G A LV
Sbjct: 428 DLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLV 487
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKAL 459
+E +G G P Y LI+ L
Sbjct: 488 KE---MVGNGITPDDSTYISLIEGL 509
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 195/410 (47%), Gaps = 39/410 (9%)
Query: 115 NSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNAL-VLLEKS 173
++ +N ++ LC GK RA L+ M PN VT++ +I +C + + ++ E
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMR 174
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GK 216
G PD T V+ C VG+V DA ++ +E +G++ G
Sbjct: 175 ERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGN 234
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
++ R+ EM +G V TYN+ + + G A + +M G++ + TY+
Sbjct: 235 LEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNI 294
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
LI G C G+ +K+ ++M +G + + Y S+++ L + +++ ++
Sbjct: 295 LINGYCKEGKEKKAMKMFEVM--VGKGIRATVVTYTSLIHALSMKGM-------VQETDR 345
Query: 337 LFPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
LF AV R ++ I C G+++ A +M ++ P+ V Y+ L+ C
Sbjct: 346 LFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLC 405
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
R+ EA L++EMT G P ++NT++SG +G++ A+K+ +E M G+G P
Sbjct: 406 LLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMM---GKGFNP 462
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ +IK LC G A L+ +MVG GI PD T+ SL+ L+ +
Sbjct: 463 TLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTE 512
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/439 (25%), Positives = 195/439 (44%), Gaps = 104/439 (23%)
Query: 31 VKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDLARAFYRKKMMASGVQGDDYTYA 85
V+A +L+ + +P+ +N+++ V+ I++ R + G+ D YTYA
Sbjct: 133 VRALELLRQMP-SPNAVTYNTVIAGFCARGRVQAGIEIMREMRER----GGIAPDKYTYA 187
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLI--------------------- 123
++ G C +V D K+ M + G V+PN+V+YN LI
Sbjct: 188 TVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVD 247
Query: 124 --------------HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
H+L G+ A +L+ +M E P+ T++ILI YCKE
Sbjct: 248 RGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKK 307
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A+ + E G VVT T ++ L G V + R
Sbjct: 308 AMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQET-------------------DRLFN 348
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+ R+G P++ YN LI+S+C G +D A ++ +M+ I+ + VTY+TL+RGLC G
Sbjct: 349 DAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLG 408
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRS 345
R+D+ +++ M +K G + + YN++
Sbjct: 409 RLDEARGLIEEM--TKRGIQPDLVSYNTL------------------------------- 435
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G+ + G+++DA + D+M+ +G P ++ Y+ +I C + +A +L+KEM G+
Sbjct: 436 --ISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGN 493
Query: 406 GYLPIASTFNTVLSGLCRQ 424
G P ST+ +++ GL +
Sbjct: 494 GITPDDSTYISLIEGLTTE 512
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 174/385 (45%), Gaps = 58/385 (15%)
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------- 214
A VL F T +L LC+ G+ + A+E+L + +
Sbjct: 100 AFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPSPNAVTYNTVIAGFCA 159
Query: 215 -GKVKGGCRFLKEM-ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG-ISWNF 271
G+V+ G ++EM ER G P+ TY +IS +C+ G ++ A VF++M +G + N
Sbjct: 160 RGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNA 219
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
V Y+ LI G C G ++ L+ M D G ++ YN ++ L+ E + EA +
Sbjct: 220 VMYNALIGGYCDQGNLEVALRYRGEMVD--RGVSMTVATYNLFVHTLFMEGRAAEAHALV 277
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGN--------------------------------- 356
++M + L P A ++ I G+C +G
Sbjct: 278 EEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMK 337
Query: 357 --VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
V++ R F+ + G P++ +Y+ LI+++C + A E+M EM P T+
Sbjct: 338 GMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTY 397
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT++ GLC G + A L+EE + RG P Y+ LI KG + A + +
Sbjct: 398 NTLMRGLCLLGRLDEARGLIEEMTK---RGIQPDLVSYNTLISGYSMKGDIKDAVKVRDE 454
Query: 475 MVGKGILPDYLTWNSLL--ICLSQQ 497
M+GKG P LT+N+++ +CL+ Q
Sbjct: 455 MMGKGFNPTLLTYNAMIKGLCLNGQ 479
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 173/395 (43%), Gaps = 55/395 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD+ + TVI G + + D K D +++ + P+ ++N+++ +
Sbjct: 181 PDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALR 240
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR +M+ GV TY + + L + R + L+ M +G+ P++ YN LI+ C
Sbjct: 241 YRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYC 300
Query: 128 KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
K GK +A + F +++ G VVT T
Sbjct: 301 KEGKEKKAMKM-----------FEVMVGK--------------------GIRATVVTYTS 329
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ L G V + + ++ V+ G R P++ YN LI+S+C
Sbjct: 330 LIHALSMKGMVQETDRLFNDA--------VRRGIR-----------PDLFMYNALINSHC 370
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G +D A ++ +M+ I+ + VTY+TL+RGLC GR+D+ +++ M +K G +
Sbjct: 371 TGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEM--TKRGIQPD 428
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN+++ G + +A++ +M + P + + I G C++G DA+
Sbjct: 429 LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK 488
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+M+ G P+ Y LI E+ A + +K
Sbjct: 489 EMVGNGITPDDSTYISLIEGLTTEDERLAAGDDVK 523
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 219/461 (47%), Gaps = 38/461 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKAT--DLVSR-FNMTPSLKIFNSILDVLVKEDI-DLAR 65
D + +I GL + R D K ++VS N+ P + ++ + V+ KE + + A+
Sbjct: 311 DNHTYSLLIDGLLKGRNA-DAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAK 367
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + M+ASG+ YA L++G C V G++LL MK R + + Y T++
Sbjct: 368 ALF-DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+C +G + A +++ +M PN V ++ LI + + +A+ +L++ G PD
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ ++ L R+ +A FL EM G PN TY
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARS-------------------FLVEMVENGLKPNAFTYGA 527
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
IS Y E SA +M+ G+ N V LI C ++ + + M D
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVD-- 585
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G G Y ++ GL++ ++ D+A E ++M + + P + I GF GN++
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A FD+M+EEG PNV+IY+ L+ +C+ + +A EL+ EM+ G P A T+ T++
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
G C+ G++ A +L +E M+ +G +P S Y+ L+ C
Sbjct: 706 GYCKSGDLAEAFRLFDE-MK--LKGLVPDSFVYTTLVDGCC 743
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 194/429 (45%), Gaps = 30/429 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M+ G+ YTY +L+ GLC R+ D LL M S GV ++ Y+ LI L K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A+ L+ +M + IC KE + A L + + G +P
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++E C R V+ G L EM+++ + + TY ++
Sbjct: 385 YASLIEGYC-------------------REKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C +G LD A ++ +M G N V Y TLI+ R D +++L+ M++ +G
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE--QGI 483
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YNS++ GL + + DEA +L +M + L P A I G+ A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E G +PN V+ LI+ YC++E+V EA + M G L A T+ +++GL
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ V A ++ E MR G+G P Y LI + G Q AS + +MV +G+ P
Sbjct: 604 KNDKVDDAEEIFRE-MR--GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 483 DYLTWNSLL 491
+ + +N LL
Sbjct: 661 NVIIYNMLL 669
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 221/491 (45%), Gaps = 31/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + ++I G R + + + + + N+ S + +++ + D+D A
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M+ASG + + Y L+K +R GD ++L MK +G+ P+ YN+LI L
Sbjct: 440 V-KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ ARS + +M E PN T+ I Y + +A +++ G +P+ V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C +V++A C + M +G L + TY +L+
Sbjct: 559 LCTGLINEYCKKEKVIEA-------------------CSAYRSMVDQGILGDAKTYTVLM 599
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + +D A ++F +M+ GI+ + +Y LI G G + I M +EG
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM--VEEG 657
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN +L G R + ++A E L +M + L P AV I G+C G++ +A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R FD+M +G VP+ +Y L+ C+ V A + G + FN +++ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWV 776
Query: 422 CRQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+ G +++ M G R P Y+ +I LC++G ++A L QM +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 481 LPDYLTWNSLL 491
+P +T+ SLL
Sbjct: 837 MPTVITYTSLL 847
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 121/507 (23%), Positives = 226/507 (44%), Gaps = 33/507 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ I+ T+I+ + D ++ + + P + +NS++ L K + +D AR+F
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ +G++ + +TY + G + K + M+ GV PN V+ LI+ C
Sbjct: 510 LVE-MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K KV A S M + + T+++L+ K + + +A + + G PDV
Sbjct: 569 KKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ +G + A I +E E+G R G+++ L EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG PN TY +I YC++G L A +F++MK+ G+ + Y TL+ G C R+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RL 745
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLF-----PRA 341
+D + + + +K+G +P+N+++ +++ + + E L + M+ F P
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ I C +GN+E AK F QM +P V+ Y L++ Y + R E + E
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRGIGRGSLPGSGHYSPLIKAL 459
G P ++ +++ ++G AL LV++ + G L+
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLT 486
+ G + A ++ MV +PD T
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 193/442 (43%), Gaps = 52/442 (11%)
Query: 94 TNRVGDGFKLLHVMK---SRGVKPNSV-IYNTLIHSLCKNGKVGRARSLMSDMEEPN--- 146
+ RV D KLL S+ V + ++ L LC G +A S++ M E N
Sbjct: 71 SKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPV 130
Query: 147 -DVTFSILICA---YCKEENLVNALVLLEKSFSFGFVPDVVTI---TKVLELLCSVGRVM 199
+V SI+ C+ K ++ V +L + + G++ + V + + LEL+ + R
Sbjct: 131 AEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCK 190
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL------- 252
++ L R ++ K M + + +V TY++LI ++C G +
Sbjct: 191 VLLDALL------RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL 244
Query: 253 --------------DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
D AL + M G+ TYD LI GLC R++D +L M+
Sbjct: 245 FKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVD 354
G Y+ ++ GL + D A + +M + P D + ++ +
Sbjct: 305 SL--GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS--KE 360
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +E AK FD MI G +P Y LI YC+E+ VR+ EL+ EM + T+
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
TV+ G+C G++ A +V+E I G P Y+ LIK + F A +L +
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKE---MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M +GI PD +NSL+I LS+
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSK 499
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 216/485 (44%), Gaps = 54/485 (11%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHV---MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ L+ G C RVGD L V M ++G+ + V YNTL+ C+ G+V AR ++
Sbjct: 172 WNTLIAGYC---RVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLD 228
Query: 141 DMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
M+E PN T++ I YC+ + + A L E G + DVVT++ ++ LC G
Sbjct: 229 MMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDG 288
Query: 197 RVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
R +A + E + G + G+ K L EM +G + ++ TY
Sbjct: 289 RFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYT 348
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ + G D D D +S N VTY LI LC +D+ ++L ME+
Sbjct: 349 ALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEK 408
Query: 301 KEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
ISP ++SV+ G + D+A EY + M++ + P V I GF
Sbjct: 409 S------ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKF 462
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+ A + M+ EG N I D L++ Q ++ EA L K+ +G G +
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ GL + G++ TA K +E M R LP + Y+ I LC G F+ A L +
Sbjct: 523 TTLIDGLFKAGDMPTAFKFGQELM---DRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTE 579
Query: 475 MVGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLN 532
M G+ PD T+N++++ C +T L LL HE+ + L + N
Sbjct: 580 MRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL-----------HEMKMSSIKPNLITYN 628
Query: 533 HLAHG 537
L G
Sbjct: 629 TLVAG 633
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 149/598 (24%), Positives = 253/598 (42%), Gaps = 127/598 (21%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDID 62
P D + T++ G RA ++ D++ + P++ + + V+E D
Sbjct: 201 PMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFD 260
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L R +GV D T + L+ GLC R + + L M G PN V Y TL
Sbjct: 261 LYEGMVR-----NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTL 315
Query: 123 IHSLCKNGK-----------VGRA----------------------------RSLMSDME 143
I SL K G+ V R R +SD
Sbjct: 316 IDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL 375
Query: 144 EPNDVTFSILICAYCKEENLVNA----LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
PN VT+++LI A CK N+ A L + EKS S P+VVT + V+ G
Sbjct: 376 SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSIS----PNVVTFSSVINGFVKRG--- 428
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+L+++ E R+ M+ +G PNV TY LI + + D+AL+V+
Sbjct: 429 ----LLDKATEYKRM------------MKERGINPNVVTYGTLIDGFFKFQGQDAALEVY 472
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+DM +G+ N D+L+ GL G+I++ + + + + S G Y +++ GL+
Sbjct: 473 HDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFK--DASGSGLSLDHVNYTTLIDGLF 530
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ A ++ +++ + P AV ++ I C+ G ++AK +M G P+
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQS 590
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ +I ++C++ +A +L+ EM P T+NT+++GL G V A L+ E
Sbjct: 591 TYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNE- 649
Query: 438 MRGIGRGSLPGS-GH----------------------------------YSPLIKALCEK 462
+ G P S H Y+ L++ LC
Sbjct: 650 --MVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYH 707
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHE 518
G + A+++L +M+G GI PD +T+N+L++ C S L N ++ ++H+
Sbjct: 708 GMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH-------LDNAFATYAQMLHQ 758
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 207/496 (41%), Gaps = 64/496 (12%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M A G+ D Y L+ G C +V +L +MK GV PN Y I C+
Sbjct: 194 RMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTK 253
Query: 131 KVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
V A L M + VT S L+ C++ A L + G P+ VT
Sbjct: 254 GVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYC 313
Query: 187 KVLELLCSVGR----------------VMDAV---EILEESGEQGRLGKVKGGCRF---- 223
+++ L GR VMD V +++ G+QG+ +VK RF
Sbjct: 314 TLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD 373
Query: 224 ----------------------------LKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
L EME K PNV T++ +I+ + + G+LD A
Sbjct: 374 NLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ MK GI+ N VTY TLI G D L++ M EG K +S++
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM--LCEGVKVNKFIVDSLV 491
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL + + +EA+ K L V+ + I G G++ A + ++++ +
Sbjct: 492 NGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNML 551
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ V+Y+ I+ C + +EA + EM G P ST+NT++ CR+G ALKL
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKL 611
Query: 434 VEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ E M I P Y+ L+ L G + A LL +MV G P LT +L
Sbjct: 612 LHEMKMSSIK----PNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667
Query: 493 CLSQQTTWLLLLLLNE 508
SQ ++L ++E
Sbjct: 668 ACSQSRRLDVILDIHE 683
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 219/522 (41%), Gaps = 61/522 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I L +A +++ + + +++P++ F+S+++ VK + Y
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M G+ + TY L+ G ++ H M GVK N I ++L++ L +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
NGK+ A +L D + V ++ LI K ++ A ++ +PD V
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ LC LGK K FL EM G P+ TYN +I
Sbjct: 557 YNVFINCLC-------------------MLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIV 597
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG-------------- 290
S+C G AL + ++MK+ I N +TY+TL+ GL G ++
Sbjct: 598 SHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSP 657
Query: 291 -----LKILQLMEDSKE--------------GSKGRISPYNSVLYGLYRENQQDEALEYL 331
++LQ S+ G I+ YN++L L +A L
Sbjct: 658 SSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVL 717
Query: 332 KQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
++M + P + + ILG C ++++A + QM+ + PN+ ++ L+
Sbjct: 718 EEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESV 777
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R+ EA ++ EM G P T++ + +G +Q N A++L E +G+G +P
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCE---MVGKGFVPKV 834
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI + G A L M +G+ P T++ L+
Sbjct: 835 STYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 175/379 (46%), Gaps = 29/379 (7%)
Query: 49 FNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+ +++D L K D+ AF + +++M + D Y + + LC+ + + L M
Sbjct: 522 YTTLIDGLFKAG-DMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
++ G+KP+ YNT+I S C+ G+ +A L+ +M+ +PN +T++ L+ +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAV 640
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A LL + S GF P +T +VL+ CS R +D + + E
Sbjct: 641 EKAKYLLNEMVSAGFSPSSLTHRRVLQA-CSQSRRLDVILDIHE---------------- 683
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M G ++ YN L+ C G+ A V +M GI+ + +T++ LI G C
Sbjct: 684 --WMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCK 741
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
+D+ M + I+ +N++L GL + EA L +MEK L P
Sbjct: 742 SSHLDNAFATYAQM--LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNN 799
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + G N +A R + +M+ +G VP V Y+ LI + + + +A EL K+
Sbjct: 800 LTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKD 859
Query: 402 MTGHGYLPIASTFNTVLSG 420
M G P + T++ ++SG
Sbjct: 860 MQKRGVHPTSCTYDILVSG 878
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 175/406 (43%), Gaps = 41/406 (10%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM---SDMEEPNDVTFSILICAYCK 159
+L M RGV + V NTL+ LC+NG+V A +L + + + ++ LI YC+
Sbjct: 122 VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHALDVIGWNTLIAGYCR 181
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+ AL + ++ + G DVV ++ C G+V A +L+
Sbjct: 182 VGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDM------------ 229
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
M+ G PNV TY I YC T ++ A D++ M +G+ + VT L+
Sbjct: 230 -------MKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVA 282
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
GLC GR + + + M+ K G+ Y +++ L + + E L L +M
Sbjct: 283 GLCRDGRFSEAYALFREMD--KVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEM---VS 337
Query: 340 RAVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
R V L +D G ++ K + + PN V Y LI A C+ V E
Sbjct: 338 RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDE 397
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL---KLVEEDMRGIGRGSLPGSGH 451
A +++ EM P TF++V++G ++G + A ++++E RG P
Sbjct: 398 AEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKE------RGINPNVVT 451
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y LI + G +A + M+ +G+ + +SL+ L Q
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQN 497
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 26/295 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLAR 65
PD+S + T+I R + KA L+ M+ P+L +N+++ L
Sbjct: 587 PDQSTYNTMIVSHCRK---GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M+++G T+ +++ + R+ + M + G+ + +YNTL+
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G +A ++ +M P+ +TF+ LI +CK +L NA + P+
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPN 763
Query: 182 VVTITKVLELLCSVGRVMDAVEIL---EESGEQ-------------GRLGKVKGGCRFLK 225
+ T +L L SVGR+ +A +L E+SG + G+ R
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
EM KG +P V TYN LIS + + G++ A ++F DM+ G+ TYD L+ G
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 13/267 (4%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P YNIL+++ + A V +M G+ ++ VT +TL+ GLC G++D
Sbjct: 101 PTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA- 156
Query: 294 LQLMEDSKEGSKG-RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILG 350
+ D G + +N+++ G R AL +M + L V + + G
Sbjct: 157 ---LADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC G V+ A+ D M E G PNV Y I YC+ + V EA +L + M +G L
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T + +++GLCR G A L E M + G+ P Y LI +L + G +
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFRE-MDKV--GAAPNHVTYCTLIDSLAKAGRGKELLS 330
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQ 497
LL +MV +G++ D +T+ +L+ L +Q
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMDWLGKQ 357
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 23/234 (9%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
V++ ++R ++ ++ + + + + ++N++L VL + ++M+ SG
Sbjct: 665 VLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSG 724
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ D T+ L+ G C ++ + + F M + + PN +NTL+ L G++G A
Sbjct: 725 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAG 784
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
+++ +ME EPN++T+ IL + K+ N V A+ L + GFVP V T ++
Sbjct: 785 TVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDF 844
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
G + A E+ K+M+++G P TY+IL+S +
Sbjct: 845 TKAGMMTQAKELF-------------------KDMQKRGVHPTSCTYDILVSGW 879
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/410 (29%), Positives = 203/410 (49%), Gaps = 33/410 (8%)
Query: 44 PSLKIFNSILDVLVK-EDIDLA-RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
PS N +L LV E +DLA RAF K + V D +T+ I++ GLC T ++
Sbjct: 148 PSAFSVNRLLSALVAAERVDLAERAF--KAALRRRVSPDLFTFNIVISGLCKTGQLRKAG 205
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR---ARSLMSDMEE----PNDVTFSILI 154
+ +++ G+ P+ V YNT+I CK G+ GR +L+ +M E PN+VTF++L+
Sbjct: 206 DVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLV 265
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
YCK+ N A+ + E+ G VVT + ++ LCS G+V + V++++E + G +
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325
Query: 215 GKV-------KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
+ G C+ ++ ME+K PNV TY IL+ Y + AL V
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAV 385
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK-EGSKGRISPYNSVLYG 317
M G+ N Y+ LI G G D + L+++ + +G + I YN ++
Sbjct: 386 KEAMSGKGVRPNARIYNCLIAGFTRNG---DWRSVSGLLDEMRMKGVRADIVTYNVLIGA 442
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + + +A++ L +M L P + + I G+C GN++ A +M + N
Sbjct: 443 LCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRAN 502
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
VV Y+ I C+ ++ E +EL+ EM G +P T++T+ G+ +G
Sbjct: 503 VVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 199/419 (47%), Gaps = 62/419 (14%)
Query: 113 KPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALV 168
+P++ N L+ +L +V A ++ + P+ TF+I+I CK L A
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
+ + ++G P VVT +++ C GR GR+ V LKEM
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRA-------------GRMYHVDA---LLKEMV 250
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PN T+N+L++ YC+ +A+ VF +MK GI+ + VTY L+ GLCS G+++
Sbjct: 251 EAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVE 310
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK------------ 336
+G+K++ M+D G ++ NSVL G ++ +A ++ ME+
Sbjct: 311 EGVKLVDEMKDL--GLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTI 368
Query: 337 -------------------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ P A + I GF +G+ D+M +G
Sbjct: 369 LVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKG 428
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
++V Y+ LI A C + VR+A +L+ EM G P+ T+NT+++G C +GN+ +A
Sbjct: 429 VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAY 488
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
++ +G R ++ Y+ IK LC G + + LL +M+ KG++P+ +T++++
Sbjct: 489 EIRTRMEKGKKRANVVT---YNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI 544
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 179/387 (46%), Gaps = 38/387 (9%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD F VI GL G+ R DV K + + + PS+ +N+I+D K R
Sbjct: 183 PDLFTFNIVISGLCKTGQLRKAGDVAKD---IRAWGLAPSVVTYNTIIDGYCKRG-RAGR 238
Query: 66 AFY----RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
++ K+M+ +G+ ++ T+ +L+ G C + ++ MK +G+ + V Y+
Sbjct: 239 MYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSA 298
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+ LC GKV L+ +M++ PN T + ++ +CK+ + +A ++
Sbjct: 299 LVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKN 358
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P+VVT T +++ + ++ DA+ + E M KG PN
Sbjct: 359 VKPNVVTYTILVDGYRRLDKMKDALAVKE-------------------AMSGKGVRPNAR 399
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
YN LI+ + G S + ++M++ G+ + VTY+ LI LC G + +K+L M
Sbjct: 400 IYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEM 459
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFCVDG 355
G + YN+++ G + A E +MEK RA V ++ I C G
Sbjct: 460 --LMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMG 517
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+E+ ++M+E+G VPN V YD +
Sbjct: 518 KMEETNELLNEMLEKGLVPNGVTYDTI 544
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 213/458 (46%), Gaps = 34/458 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P++ +N ++D + + + +G++ D +IL+K L R D L
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 104 L-HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICA 156
L H M GV+P+++ YNT++ +LC++ + RA L+ M + PN VT++ +I
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
+E + A L + G VPDVVT T +++ LC R MD E++
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCK-ARAMDKAELV----------- 284
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
L++M G PN TYN +I Y +G +F +M G+ N VT ++
Sbjct: 285 -------LRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNS 337
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
+ LC G+ + + M + +G K + Y+ +L+G E + L ME
Sbjct: 338 YMSSLCKHGKSKEAAEFFDSM--AAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEG 395
Query: 337 LFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
A R I+ + G +++ F QM E+G +P+ Y +I A+ + R+ +
Sbjct: 396 NGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLAD 455
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM-RGIGRGSLPGSGHYS 453
A + +M G P +++++ G C GN+ A +LV E M RGI R P ++
Sbjct: 456 AMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPR---PNIVFFN 512
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+I +LC++G A + ++ G PD +T+NSL+
Sbjct: 513 SIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLI 550
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 197/437 (45%), Gaps = 32/437 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLAR 65
P+ + TVI GL R +V KA +L + P + + SI+D L K
Sbjct: 225 PNVVTYNTVIHGLFRE---GEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKA 281
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
++M+++G Q + TY ++ G ++ + + + M S+G+ PN V N+ + S
Sbjct: 282 ELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSS 341
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+GK A M +PN VT+S+L+ Y E V+ L L G V D
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVAD 401
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+V + V+DA G+ G + +M+ +G +P+ TY I
Sbjct: 402 ----QRVFNI------VIDA---------YGKRGMMDETMLIFTQMQEQGVIPDACTYGI 442
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I+++ G L A+D FN M G+ + Y +LI+G C G + +++ M S+
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMM-SR 501
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+ I +NS++ L +E + EA + + + P + + I G+ + G +E
Sbjct: 502 GIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEK 561
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A D MI G P+VV Y+ LI YC+ R+ + L EM G P T+ +L
Sbjct: 562 AFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILH 621
Query: 420 GLCRQGNVGTALKLVEE 436
GL G A K+ E
Sbjct: 622 GLFNDGRTVGAKKMCHE 638
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 180/412 (43%), Gaps = 40/412 (9%)
Query: 35 DLVSRFN------MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D+++ FN + ++FN ++D K + +M GV D TY I++
Sbjct: 385 DMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVI 444
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-----E 143
R+ D + M + G+KP ++Y++LI C +G + +A+ L+S+M
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
PN V F+ +I + CKE +V A + + G PDV+T +++
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLID------------- 551
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
G +GK++ L M G P+V +YN LI YC G +D L +F +M
Sbjct: 552 ------GYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEML 605
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ +TY ++ GL + GR K+ M +S G+ IS +L GL R N
Sbjct: 606 SKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES--GTTMDISTCGIILGGLCRNNC 663
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDG-----NVEDAKRCFDQMIEEGGVPNVVI 378
DEA+ K KL V ++ I+ +D E+AK FD + G VPN
Sbjct: 664 DDEAIAMFK---KLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAST 720
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
Y +I +E V EA + M G P + N ++ L +G + A
Sbjct: 721 YGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH--GYLPIASTFNTVLSGLCR 423
+M E G P+ + Y+ ++ C++ R + A +L+ M G P T+NTV+ GL R
Sbjct: 180 RMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFR 239
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+G V A L E M+ +G +P Y+ +I ALC+ A ++L QM+ G P+
Sbjct: 240 EGEVSKACNLFHEMMQ---QGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 484 YLTWNSLLICLSQQTTW 500
+T+N ++ S W
Sbjct: 297 KVTYNCMIHGYSISGQW 313
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 246/510 (48%), Gaps = 50/510 (9%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQG 79
L R I D+V DL+ + + +L + +I L +K I A F +KM G
Sbjct: 141 LREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRA-PFALRKMTEVGFIL 199
Query: 80 DDYTY----AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
+ Y+Y +L+ G C + K+ M S G+KP+ Y+ L+ +L + G +
Sbjct: 200 NAYSYNGLIHLLLPGFC-----NEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+L+ +M+ PN T++I I A + + +A + ++ G PDV+T T +++
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314
Query: 192 LCSVGRVMDAVEI-------------------LEESGEQGRLGKVKGGCRFLKEMERKGC 232
LC+ G++ A E+ +++ G+ G L VK RF EME G
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVK---RFWNEMEVDGY 371
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
P+V TY ILI + C++G +D A D+ + M GI N TY+T+I GL R+D+ L+
Sbjct: 372 APDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALE 431
Query: 293 ILQLMEDSKEGSKG-RISPYNSVLYGLYRENQQD--EALEYLKQMEK--LFPRAVDRSLK 347
+L+ ME S G + + ++ VL+ Y D +A++ + M+K + P +
Sbjct: 432 LLENME-----SLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNAS 486
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G + +A+ F+ + + G P+ V Y+ L+ Y + ++ +A++L+ EM G
Sbjct: 487 LYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC 546
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P N++++ L + G V A K+ ++ + P Y+ L+ L ++G
Sbjct: 547 EPDVMIINSLINTLYKAGRVDAAWKMFGR-LKNLKLA--PTVVTYNILLTGLGKEGKILK 603
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A L M G P+ +T+NSLL CLS+
Sbjct: 604 ALELFGSMTESGCPPNTITFNSLLDCLSKN 633
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 226/524 (43%), Gaps = 46/524 (8%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DID 62
SI P+ + IR LGRAR I+D + P + + ++D L +D
Sbjct: 263 SIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLD 322
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD---GFKLLHVMKSRGVKPNSVIY 119
A+ Y KM AS D TY LM +VGD + + M+ G P+ V Y
Sbjct: 323 KAKELY-VKMRASSHSPDRVTYITLMDKF---GKVGDLETVKRFWNEMEVDGYAPDVVTY 378
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
LI +LCK+G V RA ++ M PN T++ +IC K L AL LLE S
Sbjct: 379 TILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMES 438
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G P + ++ G A++ E M+++G +P+
Sbjct: 439 LGVKPTAFSYVLFIDYYGKSGDPAKAIDTFE-------------------TMKKRGIMPS 479
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ N + + ETG + A D+FND+ G+S + VTY+ L++ G+ID ++L
Sbjct: 480 IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLS 539
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCV 353
M +G + + NS++ LY+ + D A + +++ KL P V ++ + G
Sbjct: 540 EM--ISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGK 597
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+G + A F M E G PN + ++ L+ + + V A ++ MT P T
Sbjct: 598 EGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLT 657
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+NT++ GL R+G + A + + + P LI + G + A +++
Sbjct: 658 YNTIIYGLIREGRIDYAFWFFHQMKKFLS----PDYVTLCTLIPGVVRHGRVEDAIKVVM 713
Query: 474 QMVGKGIL-PDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVV 516
+ V + L + W L+ C+ + + E +SF ++
Sbjct: 714 EFVHQACLQTNSQFWGELMECILTEAE------IEEAISFAEIL 751
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 135/558 (24%), Positives = 234/558 (41%), Gaps = 79/558 (14%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKE 59
H PD + +++ +A I+ KAT L+S P + I NS+++ L K
Sbjct: 507 HKCGLSPDSVTYNMLMKCYSKAGQID---KATQLLSEMISKGCEPDVMIINSLINTLYKA 563
Query: 60 D-IDLA-RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
+D A + F R K + + TY IL+ GL ++ +L M G PN++
Sbjct: 564 GRVDAAWKMFGRLKNLK--LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTI 621
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKS 173
+N+L+ L KN V A + M P+ +T++ +I +E + A +
Sbjct: 622 TFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------------------- 212
F PD VT+ ++ + GRV DA++++ E Q
Sbjct: 682 KKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAE 740
Query: 213 ----------------------RLGKVKGGCRFLKEMERK----------GCLPNVDTYN 240
L +K C+ K ++ + G P +++YN
Sbjct: 741 IEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYN 800
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ + + AL++F DMK G N TY+ L+ RI+ K+ L +
Sbjct: 801 CLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRIN---KLYDLYSEM 857
Query: 301 K-EGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEKLF-PRAVDRSLKILGFCVDGNV 357
+ G + +N ++ L + N ++AL+ Y + M F P I G G
Sbjct: 858 RSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRS 917
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A + F++M++ G PN VIY+ LI+ + + + A EL K+M G P ++ +
Sbjct: 918 EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977
Query: 418 LSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ LC G + A++ EE + G+ P + Y+ +I L + A L +M
Sbjct: 978 VECLCITGRIDEAVQYFEELKLTGLD----PDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033
Query: 477 GKGILPDYLTWNSLLICL 494
+GI PD T+N+L++ L
Sbjct: 1034 NRGISPDLYTYNALILHL 1051
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 167/358 (46%), Gaps = 25/358 (6%)
Query: 52 ILDVLVKEDIDL-ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR 110
++ VL K L A+ + K G+ +Y LM GL +N +L MKS
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
G PN+ YN L+ + K+ ++ + L S+M EPN +T +I+I A K NL A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------------- 212
L L + S F P T +++ L GR A++I EE + G
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 213 --RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
+ G++ C K+M ++G P++ +Y IL+ C TG +D A+ F ++K+ G+ +
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPD 1005
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
V+Y+ +I GL R+D+ L + M++ G + YN+++ L + D A++
Sbjct: 1006 TVSYNFIINGLGKSRRLDEALSLFSEMKN--RGISPDLYTYNALILHLGIAGKVDVAVKM 1063
Query: 331 LKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
++++ L P + I G + GN + A F +M+ G PN + L + Y
Sbjct: 1064 YEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKY 1121
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 52/270 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + +I GL +A +K + + + P+ I+N +++ K +ID A
Sbjct: 899 PTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACEL 958
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ KKM+ G++ D +Y IL++ LC+T R+ + + +K G+ P++V YN +I+ L
Sbjct: 959 F-KKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017
Query: 128 KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
K+ ++ A SL S+M+ G PD+ T
Sbjct: 1018 KSRRLDEALSLFSEMKNR-------------------------------GISPDLYTYNA 1046
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ L G+V AV++ E E++ G P+V TYN LI +
Sbjct: 1047 LILHLGIAGKVDVAVKMYE-------------------ELQLVGLEPSVFTYNALIRGHS 1087
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+G D A VF M + G S N T+ L
Sbjct: 1088 LSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 41/292 (14%)
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI-------- 287
D N ++ E ++ + VF+ M+ I N TY T+ + L G I
Sbjct: 131 TDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALR 190
Query: 288 --------------------------DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
++ LK+ + M EG K + Y++++ L R
Sbjct: 191 KMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRM--ISEGMKPSMKTYSALMVALGRR 248
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ + L++M+ L P ++ I ++DA F +M +EG P+V+ Y
Sbjct: 249 GDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITY 308
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
LI A C ++ +A EL +M + P T+ T++ + G++ T + E
Sbjct: 309 TVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEV 368
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ LI+ALC+ G A +L M KGI P+ T+N+++
Sbjct: 369 D---GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 213/480 (44%), Gaps = 41/480 (8%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+A + R P+L N++LD LVK +M+ G+ TY L+
Sbjct: 137 EALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINAC 196
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
V ++ M ++ + PN V Y T+I +LC+ G +G A L M+E PN
Sbjct: 197 RFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQ 256
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
T+++L+ +C+ +++ +A+VL ++ G P+ V T +++ C R +A
Sbjct: 257 YTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEA------ 310
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
KG EM R G P V YN L+ +G AL ++ +M G+
Sbjct: 311 ----------KG---MFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGL 357
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ T ++RGLC GG++ + LQ +++ +G + YN+++ R +EA
Sbjct: 358 CPDEFTCSIVVRGLCDGGQMHVADRFLQGVQE--DGVNLNAAAYNALIDEYCRIGNLEEA 415
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
L +M + + P V S I G G ++ A + +M+ +G PNVV Y LIH
Sbjct: 416 LATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 475
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-------DM 438
+ + + A L KEM +G P A T + ++ GLCR+ V A++ V E D+
Sbjct: 476 HAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDI 535
Query: 439 RGIGRGS-------LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +P S Y LI L G A L M G++PD T+ L+
Sbjct: 536 HSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLI 595
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 181/457 (39%), Gaps = 74/457 (16%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLA 64
Q P+ + T+I L I D + D + M P+ +N ++ ++D++ A
Sbjct: 216 QIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSA 275
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
Y ++++ SG+ + + L+ G C R + + M GV P +YN+L+
Sbjct: 276 VVLY-QELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMD 334
Query: 125 SLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
++G A +L +M G PD T
Sbjct: 335 GAFRSGNAQEALALYQEMTR-------------------------------LGLCPDEFT 363
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ V+ LC G++ A RFL+ ++ G N YN LI
Sbjct: 364 CSIVVRGLCDGGQMHVAD-------------------RFLQGVQEDGVNLNAAAYNALID 404
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC G L+ AL M GI N V+Y +LI G G++ + I M +G
Sbjct: 405 EYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEM--VAKGI 462
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ + Y ++++G + D A K+M + P A+ S+ + G C + V++A R
Sbjct: 463 EPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVR 522
Query: 363 ---------CFD--------QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
C D + EE +PN VIY LI+ + + EA +L M
Sbjct: 523 FVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKS 582
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
G +P + T+ ++ G C G V A+ L DM IG
Sbjct: 583 GMIPDSFTYTLLIRGQCMLGYVLNAMMLY-ADMMKIG 618
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 107/252 (42%), Gaps = 18/252 (7%)
Query: 241 ILISSYCETGVLDSALDVFNDMK-IDGISWNFVTYDTLIRGL---CSGGRIDDGLKILQL 296
+L+ + + G+LD AL VF ++ + + D L++ C+ D+ L+
Sbjct: 124 VLVIALSQMGLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWELFDEMLR---- 179
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVD 354
G + YN+++ + +A E QM +++ P V + I C +
Sbjct: 180 -----RGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEE 234
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G + DA+R FD M E G PN Y+ L+ +CQ + V A L +E+ G P A F
Sbjct: 235 GCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIF 294
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ G C+ A + E R G P Y+ L+ G Q A L +
Sbjct: 295 TTLIDGFCKAKRFSEAKGMFLEMPR---FGVAPTVPVYNSLMDGAFRSGNAQEALALYQE 351
Query: 475 MVGKGILPDYLT 486
M G+ PD T
Sbjct: 352 MTRLGLCPDEFT 363
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/503 (27%), Positives = 212/503 (42%), Gaps = 75/503 (14%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+MM G D TY ++ LC RV F L MK GV P+ Y LI S CK
Sbjct: 441 KEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKA 500
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +A+S +M PN VT++ L+ AY K + L A + + P+ +T
Sbjct: 501 GLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITY 560
Query: 186 TKVLELLCSVGRVMDAVEILEE-SGEQGRL-------GK---------------VKGGCR 222
+ +++ LC G + A E+ + G + GK V G C+
Sbjct: 561 SALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCK 620
Query: 223 ---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
L M GC PN Y+ L+ +C+ G +DSA +VF M G + T
Sbjct: 621 AQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHT 680
Query: 274 YDTLIRGLCSGGRIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
Y +LI + GR+D +K+L Q+++DS + Y +++ GL + + ++AL L
Sbjct: 681 YTSLIDRMFKDGRLDLAMKVLSQMLKDS---CNPNVVTYTAMVDGLCKTGETEKALNLLS 737
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ-- 388
MEK P V + I G G V+ F QM +G PN V Y LI+ C
Sbjct: 738 LMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797
Query: 389 -------------------------------EERVREASELMKEMTGHGYLPIASTFNTV 417
+R + L++EM H PIA + +
Sbjct: 798 LLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGML 857
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ + G + TAL+L +E M ++ ++ LI+ALC + A L +M
Sbjct: 858 IDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRR 917
Query: 478 KGILPDYLTWNSLLICLSQQTTW 500
+GI+PD + L+ L ++ W
Sbjct: 918 RGIVPDLSAFVCLVKGLIERNKW 940
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 193/470 (41%), Gaps = 83/470 (17%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G ++G +++++M + G P+ ++N+L+H+ C A L + M
Sbjct: 308 TYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRM 367
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVL----------------------------- 169
P V ++I I + C E L N +L
Sbjct: 368 NTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCL 427
Query: 170 -----LEKSFSF-------GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
EK+F GFVPD T TKV+ LC RV A + +E + G
Sbjct: 428 CGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDV 487
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ G ++ + EM GC PNV TY L+ +Y ++ L A D+F+
Sbjct: 488 YTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M D N +TY LI GLC G I ++ + I +++ Y E
Sbjct: 548 MVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKL----------IGTSDNIESDFYFE 597
Query: 322 NQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
K + + P V + G C V DA D M+ G PN ++YD
Sbjct: 598 G---------KDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDA 648
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
L+ +C+ + A E+ MT GYLP T+ +++ + + G + A+K++ + ++
Sbjct: 649 LVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD- 707
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ ++ LC+ G + A LL M KG P+ +T+ +L+
Sbjct: 708 --SCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALI 755
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 198/478 (41%), Gaps = 51/478 (10%)
Query: 40 FNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
F PS +N+++ VL + AF +K+M ASG D T + LC R G
Sbjct: 198 FGYRPSAVTYNALVQVLASAG-QVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWG 256
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILI 154
D LL + K ++V+ +I L + A S + M PN VT+ L+
Sbjct: 257 DALDLL---EREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLL 313
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
+ K++ L ++ + G P ++ C+ A
Sbjct: 314 TGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAY------------ 361
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYC------ETGVLDSALDVFNDMKIDGIS 268
+ M GC P YNI I S C +LD A V+ +M +
Sbjct: 362 -------KLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCV 414
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
N + R LC G+ + +I++ M ++G S Y V+ L + + D+A
Sbjct: 415 LNKINTANFARCLCGVGKFEKAFQIVKEM--MRKGFVPDASTYTKVITFLCQAKRVDKAF 472
Query: 329 EYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
++M+K+ P ++ I FC G +E A+ FD+M G PNVV Y L+HAY
Sbjct: 473 LLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAY 532
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL----------VEE 436
+ +++ +A+++ M G P A T++ ++ GLC+ G + A ++ +E
Sbjct: 533 LKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIES 592
Query: 437 DMRGIGRGS---LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
D G+ + P Y L+ LC+ A LL M+ G P+ + +++L+
Sbjct: 593 DFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALV 650
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 169/376 (44%), Gaps = 32/376 (8%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
FY + + + TY L+ GLC +V D LL M + G +PN ++Y+ L+
Sbjct: 594 FYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGF 653
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G++ A+ + M + P+ T++ LI K+ L A+ +L + P+V
Sbjct: 654 CKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNV 713
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T +++ LC G A+ +L ME+KGC PNV TY L
Sbjct: 714 VTYTAMVDGLCKTGETEKALNLLSL-------------------MEKKGCSPNVVTYTAL 754
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + G +D+ L++F MK G + N+VTY LI C+ G +DD +L M+ +
Sbjct: 755 IDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHW 814
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
+ Y + + G + +L L++ME P A + I F G +E A
Sbjct: 815 PK--YLQGYRTTVQGFSKRFLA--SLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETA 870
Query: 361 KRCFDQMIEEGGVPNVV---IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+M+E N+ ++ LI A C +V EA L EM G +P S F +
Sbjct: 871 LELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCL 930
Query: 418 LSGLCRQGNVGTALKL 433
+ GL + AL+L
Sbjct: 931 VKGLIERNKWNEALQL 946
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 177/427 (41%), Gaps = 56/427 (13%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-EEPNDVT---FSILICAYC 158
L + G K Y+ L L A L+ ++ E+ DV ++L+ C
Sbjct: 121 FLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCC 180
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE---SG------ 209
+ AL L + FG+ P VT ++++L S G+V A + +E SG
Sbjct: 181 LQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRS 240
Query: 210 ----------EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
++GR G L +ER+ + +IS E + + A+
Sbjct: 241 TVGSFAQALCKEGRWGDA------LDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFL 294
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M+ + N VTY TL+ G ++ +I+ +M EG S +NS+++
Sbjct: 295 HRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMM--MTEGCNPSPSLFNSLVHTYC 352
Query: 320 RENQQDEALEYLKQMEKLF---------PRAVDRSLKILGFCVDGNVED------AKRCF 364
N +D A Y KLF P V ++ I C + + A++ +
Sbjct: 353 --NAEDYAYAY-----KLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVY 405
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++M+ V N + C + +A +++KEM G++P AST+ V++ LC+
Sbjct: 406 EEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQA 465
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
V A L +E M+ +G P Y+ LI + C+ G + A +M G P+
Sbjct: 466 KRVDKAFLLFQE-MKKVGVN--PDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNV 522
Query: 485 LTWNSLL 491
+T+ +LL
Sbjct: 523 VTYTALL 529
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 121/318 (38%), Gaps = 58/318 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P++ ++ ++ G + I+ + +++ PS+ + S++D + K+ +DLA
Sbjct: 641 PNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ + TY ++ GLC T LL +M+ +G PN V Y LI L
Sbjct: 701 L-SQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLG 759
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCK------------------------ 159
K GKV L M+ PN VT+ ILI C
Sbjct: 760 KAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQ 819
Query: 160 ---------EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ + +L LLE+ S P +++ GR+ A+E+ +E E
Sbjct: 820 GYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMME 879
Query: 211 QGRL-------------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+V+ EM R+G +P++ + L+ E
Sbjct: 880 VSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNK 939
Query: 252 LDSALDVFNDMKIDGISW 269
+ AL + + +G++W
Sbjct: 940 WNEALQLCYGICQEGVNW 957
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/512 (26%), Positives = 225/512 (43%), Gaps = 75/512 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD V+R L A +D+ + + + + PS+ +N++LD +KE A
Sbjct: 167 PDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAML 226
Query: 69 RKKM--MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+M SG +D TY +++ GL + + +L+ M+ K +S YN LI L
Sbjct: 227 LKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGL 285
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
G V + L +ME P VT++ +I + + A V + + G +PDV
Sbjct: 286 LARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDV 345
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLG----------KVKGGCRF--------- 223
+T +L C G + +A+ + G+ R G ++ G CR
Sbjct: 346 ITYNSLLNGYCKAGNLKEALLLF---GDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARIL 402
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM +GCLPNV TY IL+ L A + F++M G+ + Y+T I C+
Sbjct: 403 KEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI---CA 459
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
+ D + L+L E + +E + V
Sbjct: 460 ELILGDIARALELRE--------------------------------VLMLEGISSDTVT 487
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I G C GN++DAK +M+ G P+ + Y CLIHA+C+ +REA ++ M
Sbjct: 488 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 547
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
G LP A TF ++ CR+GN+ +A K++EE G P Y+ LI AL
Sbjct: 548 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE-------GVEPNEITYNVLIHAL 600
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C G Q AS +M+ +G++ + T+ L+
Sbjct: 601 CRMGRTQLASHHFHEMLERGLVANKYTYTLLI 632
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 211/454 (46%), Gaps = 36/454 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + GV D +++ L R D + M G++P+ V YNTL+ S K
Sbjct: 158 REMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKE 217
Query: 130 GKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLE------KSFSFG 177
G+ + L+ +ME PNDVT++++I ++ +L A L+E K+ SF
Sbjct: 218 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT 277
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-------------GKVKGGCRFL 224
+ P IT +L C V +V D +E G + G V+
Sbjct: 278 YNP---LITGLLARGC-VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM G LP+V TYN L++ YC+ G L AL +F D++ G++ +TY+ I G C
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRL 393
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G +++ +IL+ E ++G + Y ++ G A E+ +M + L P
Sbjct: 394 GDLEEA-RILK-EEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCF 451
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ +I + G++ A + ++ EG + V Y+ LIH C+ +++A EL +M
Sbjct: 452 AYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 511
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+G P T+ ++ C +G + A K+ I G LP + ++ +I A C +
Sbjct: 512 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNN---MISDGLLPSAVTFTVIIHAYCRR 568
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G SA +M+ +G+ P+ +T+N L+ L +
Sbjct: 569 GNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 602
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 24/225 (10%)
Query: 62 DLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
D+ARA R+ +M G+ D TY IL+ GLC T + D +L M S G++P+ + Y
Sbjct: 465 DIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 524
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LIH+ C+ G + AR + ++M P+ VTF+++I AYC+ NL +A K
Sbjct: 525 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 584
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P+ +T ++ LC R+G+ + EM +G + N
Sbjct: 585 GVEPNEITYNVLIHALC-------------------RMGRTQLASHHFHEMLERGLVANK 625
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
TY +LI C+ G + A+ + +M +GI +++T+ L++G
Sbjct: 626 YTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 24/365 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P++ +N+++ L++ + A +M A G+ D TY L+ G C + + L
Sbjct: 308 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 367
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
++ G+ P + YN I C+ G + AR L +M E PN T++IL+
Sbjct: 368 FGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLN 427
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTI-TKVLE--LLCSVGRVMDAVEILEESGEQG---- 212
+L A ++ S G PD T++ +L + R ++ E+L G
Sbjct: 428 VCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVT 487
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G +K +M G P+ TY LI ++CE G+L A +FN+M
Sbjct: 488 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 547
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
DG+ + VT+ +I C G + + M + EG + YN +++ L R +
Sbjct: 548 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE--EGVEPNEITYNVLIHALCRMGR 605
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
A + +M L +L I G C GN EDA R + +M + G P+ + +
Sbjct: 606 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 665
Query: 382 LIHAY 386
L+ +
Sbjct: 666 LVKGF 670
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I ++ + K + + + PS F I+ + + +
Sbjct: 518 PDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGW 577
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM+ GV+ ++ TY +L+ LC R H M RG+ N Y LI CK
Sbjct: 578 FRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCK 637
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILI 154
G A +M + P+ +T L+
Sbjct: 638 VGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F +M G P+V + ++ A R + + +EM G P T+NT+L +
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+G L++E M G G LP Y+ +I L KG + A+ L+ M
Sbjct: 217 EGRKDKVAMLLKE-METRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM 267
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 213/486 (43%), Gaps = 49/486 (10%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--------IDLARAFYRK--------- 70
ND + +++ R L + ++DV+ ++ +L R F RK
Sbjct: 128 NDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKT 187
Query: 71 --KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ SG D TY +++ GLC R+ L+ M G P+++ YN++I L
Sbjct: 188 LNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFD 247
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G +A + D P +T+++LI CK AL +LE G PD+VT
Sbjct: 248 KGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVT 307
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ L G+ D ++ + G PN TYN LI
Sbjct: 308 YNSLVNLTSKQGKYEDTALVI-------------------LNLLSHGMQPNAVTYNTLIH 348
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
S G D D+ M VTY+ L+ GLC G +D + M E
Sbjct: 349 SLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTM--VTENC 406
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
I YN++L GL +E DE ++ L + P V ++ I G G++E AK
Sbjct: 407 SPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKE 466
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+D+M+++G +P+ + + L +C+ +++ EA+EL+KEM+ + + V+ GLC
Sbjct: 467 LYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLC 526
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
RQ V A+++++ ++G P YS LIKA+ + G + A+ L ++ IL
Sbjct: 527 RQKKVDIAIQVLDLMVKGQCN---PDERIYSALIKAVADGGMLKEANDLHQTLIKWKILK 583
Query: 483 DYLTWN 488
+ N
Sbjct: 584 KEIMLN 589
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 185/412 (44%), Gaps = 32/412 (7%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A VQ D+ T +++ LC ++ +L+ VM + P+ LI + G V
Sbjct: 123 APFVQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVD 182
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A ++ M P+ +T++++I CK L +AL L+E G PD +T ++
Sbjct: 183 EACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSII 242
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
L G AV F ++ RKGC P + TY +LI C+
Sbjct: 243 RCLFDKGNFNQAVN-------------------FWRDQLRKGCPPYLITYTVLIELVCKY 283
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD-GLKILQLMEDSKEGSKGRI 308
AL+V DM ++G + VTY++L+ G+ +D L IL L+ G +
Sbjct: 284 CGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLS---HGMQPNA 340
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN++++ L DE + LK M + P V ++ + G C G ++ A +
Sbjct: 341 VTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYST 400
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+ E P+++ Y+ L+ C+E + E +L+ + G P T+N V+ GL R G+
Sbjct: 401 MVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGS 460
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ +A +L +E + +G +P +S L C + A+ LL +M K
Sbjct: 461 MESAKELYDE---MVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMK 509
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I GF G V++A + ++M+ GGVP+ + Y+ +I C+ R+R A +L+++M+ G
Sbjct: 172 IRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGC 231
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P A T+N+++ L +GN A+ + +R +G P Y+ LI+ +C+ G
Sbjct: 232 SPDAITYNSIIRCLFDKGNFNQAVNFWRDQLR---KGCPPYLITYTVLIELVCKYCGAAR 288
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQQ-----TTWLLLLLLNE-----MVSFVMVVH 517
A +L M +G PD +T+NSL+ S+Q T ++L LL+ V++ ++H
Sbjct: 289 ALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIH 348
Query: 518 EL 519
L
Sbjct: 349 SL 350
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 39/287 (13%)
Query: 1 MPHSIQSPPDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV 57
+ H +Q P+ + T+I L G ++D++K +++ + P+ +N +L+ L
Sbjct: 332 LSHGMQ--PNAVTYNTLIHSLINHGYWDEVDDILK---IMNETSSPPTHVTYNILLNGLC 386
Query: 58 KEDI-DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
K + D A +FY M+ D TY L+ GLC + +G +LL+++ P
Sbjct: 387 KSGLLDRAISFY-STMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGL 445
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLL-E 171
V YN +I L + G + A+ L +M + P+++T S L +C+ + L A LL E
Sbjct: 446 VTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKE 505
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
S + + +L LC +V A+++L+ VKG C
Sbjct: 506 MSMKEQRIKNTAYRCVILG-LCRQKKVDIAIQVLDL--------MVKGQCN--------- 547
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
P+ Y+ LI + + G+L A ND+ I W + + ++
Sbjct: 548 --PDERIYSALIKAVADGGMLKEA----NDLHQTLIKWKILKKEIML 588
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 238/528 (45%), Gaps = 63/528 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + ++T+ + L + A + F + +N ++ +L+K
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ G + TY+ LM GL + LL M++ G+KPN + I L +
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK+ A ++ M++ P+ VT+++LI A C L A + EK + PD VT
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+L+ S R +D+V+ +F EME+ G +P+V T+ IL+ +
Sbjct: 332 ITLLDRF-SDNRDLDSVK------------------QFWSEMEKDGHVPDVVTFTILVDA 372
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED------ 299
C+ G A D + M+ GI N TY+TLI GL R+DD L++ ME
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 300 ------------------------SKEGSKGRISPY----NSVLYGLYRENQQDEALEYL 331
K +KG I+P N+ LY L + + EA +
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKG-IAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
++ L P +V ++ + + G +++A + +M+E G P+V++ + LI+ +
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV EA ++ M P T+NT+L+GL + G + A++L E ++ +G P +
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ---KGCPPNT 608
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++ L LC+ A +L +M+ G +PD T+N+++ L +
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 223/543 (41%), Gaps = 66/543 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + +I L AR ++ + + + P + ++LD D+D + F
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G D T+ IL+ LC G+ F L VM+ +G+ PN YNTLI L
Sbjct: 351 W-SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ ++ A L +ME +P T+ + I Y K + V+AL EK + G P++V
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
L L GR +A +I + G ++G++ + L EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 228 ERKGCLPNVD-----------------------------------TYNILISSYCETGVL 252
GC P+V TYN L++ + G +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A+++F M G N +T++TL LC + LK+L M D G + YN
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM--GCVPDVFTYN 647
Query: 313 SVLYGLYRENQQDEALEYLKQMEKL-FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE- 370
++++GL + Q EA+ + QM+KL +P V + G +EDA + +
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA-STFNTVLSGLCRQGNVGT 429
P + ++ LI + E + A + + +G S ++ C+ NV
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG 767
Query: 430 ALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L E+ + +G + LP Y+ LI L E + A + +Q+ G +PD T+N
Sbjct: 768 ARTLFEKFTKDLGVQPKLP---TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 489 SLL 491
LL
Sbjct: 825 FLL 827
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 143/580 (24%), Positives = 232/580 (40%), Gaps = 97/580 (16%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVS-RFNMTPSLKIFNSILDVLVKEDIDLA 64
S PD S V RGL + V+ N+ + + N +L+ L +
Sbjct: 77 SSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEE 136
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A+ M ++ D TY + K L + + L M+ G N+ YN LIH
Sbjct: 137 MAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIH 196
Query: 125 SLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L K+ A R ++ + P+ T+S L+ K ++ + + LL++ + G P
Sbjct: 197 LLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+V T T + +L G++ +A EI LK M+ +GC P+V TY
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEI-------------------LKRMDDEGCGPDVVTYT 297
Query: 241 ILISSYCETGVLDSALDVFNDMKI-----------------------------------D 265
+LI + C LD A +VF MK D
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + VT+ L+ LC G + L +M D +G + YN+++ GL R ++ D
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD--QGILPNLHTYNTLICGLLRVHRLD 415
Query: 326 EALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ALE ME L P A + I + G+ A F++M +G PN+V + +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG--- 440
++ + R REA ++ + G +P + T+N ++ + G + A+KL+ E M
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 441 ---IGRGSL--------------------------PGSGHYSPLIKALCEKGGFQSASML 471
I SL P Y+ L+ L + G Q A L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 472 LVQMVGKGILPDYLTWNSLLICL--SQQTTWLLLLLLNEM 509
MV KG P+ +T+N+L CL + + T L +L M
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 225/550 (40%), Gaps = 72/550 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA-RA 66
PD + +++ + I++ +K + P + + NS+++ L K D +D A +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F R K M ++ TY L+ GL ++ + +L M +G PN++ +NTL L
Sbjct: 561 FMRMKEMK--LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKN +V A ++ M + P+ T++ +I K + A+ + + PD
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDF 677
Query: 183 VTITKVLELLCSVGRVMDAVEI------------------------LEESGEQGRLG--- 215
VT+ +L + + DA +I L E+G +
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 216 --KVKGGCR-------------------------FLKEMERKGCLPNVDTYNILISSYCE 248
G CR F K + G P + TYN+LI E
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+++ A DVF +K G + TY+ L+ G+ID+ ++ + M S +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM--STHECEANT 855
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+N V+ GL + D+AL+ + P A I G G + +AK+ F+
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M++ G PN IY+ LI+ + + A L K M G P T++ ++ LC G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM-VGKGILPDY 484
V L +E G P Y+ +I L + + A +L +M +GI PD
Sbjct: 976 RVDEGLHYFKELKES---GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 485 LTWNSLLICL 494
T+NSL++ L
Sbjct: 1033 YTYNSLILNL 1042
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 164/359 (45%), Gaps = 29/359 (8%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
AR + K GVQ TY +L+ GL + + + +KS G P+ YN L+
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS-FGF 178
+ K+GK+ L +M E N +T +I+I K N+ +AL L S F
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P T +++ L GR+ +A ++ E G + GCR PN
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFE--------GMLDYGCR-----------PNCAI 928
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNILI+ + + G D+A +F M +G+ + TY L+ LC GR+D+GL + ++
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDG 355
+S G + YN ++ GL + ++ +EAL +M+ + P + IL + G
Sbjct: 989 ES--GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
VE+A + ++++ G PNV ++ LI Y + A + + M G+ P T+
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 124/327 (37%), Gaps = 59/327 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + +I GL A MI V P + +N +LD K ID
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSL 126
Y K+M + + T+ I++ GL V D L + +M R P + Y LI L
Sbjct: 843 Y-KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K+G++ A+ L M + PN ++ILI + K A L ++ G PD+
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG-------------------RL--------- 214
T + +++ LC VGRV + + +E E G RL
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 215 ------------------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
G V+ + E++R G PNV T+N LI Y +G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTL 277
+ A V+ M G S N TY+ L
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/518 (27%), Positives = 233/518 (44%), Gaps = 37/518 (7%)
Query: 3 HSIQSPPDESIFITVIRG---LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE 59
+SIQ PDE + +I G LGR + + K ++R + P + FNS++D L K
Sbjct: 336 NSIQ--PDEVTYTAMIHGYSCLGRWK---EAAKMFKEMTREGLIPDIVTFNSLMDSLCKH 390
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
A + G + D +Y+IL+ G R D L H M G+ +S +
Sbjct: 391 KRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCF 450
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
N LI++ K G + A + ++M PN VT++ +I A C+ L +A+ L + S
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVK 218
G P+ V +++ C+ G ++ A E++ E +QG G+V
Sbjct: 511 IGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVM 570
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ G P++ T+N LI YC G +D A V + M G + VTY TLI
Sbjct: 571 NAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI 630
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKL 337
G GRIDDGL + + M + K Y+ VL GL+R + A + +M E
Sbjct: 631 NGYFKSGRIDDGLILFREMLCKR--VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESG 688
Query: 338 FPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
++ IL G C + ++A F ++ + I + +IHA + +R EA
Sbjct: 689 TAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAH 748
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+L ++ G +P AST+ ++ L ++G+V A ++ M G P S + +I
Sbjct: 749 DLFASVSASGLVPNASTYGVMIINLLKEGSVEEA-DIMFSSMEKT--GCAPSSRLLNDII 805
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ L +KG A + ++ G I+ + SLLI L
Sbjct: 806 RMLLQKGEIVKAGYYMSKVDGT-IISLEASTTSLLISL 842
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 204/459 (44%), Gaps = 39/459 (8%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK-LLHVMKSRGVKPNSVIYN 120
DL AF+ +++ +G++ D +K LC R + LLH M G P++ YN
Sbjct: 182 DLGPAFF-ARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYN 240
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
T+I SLC + A ++ M + P+ V+++++I E + A L +
Sbjct: 241 TVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQ 300
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEIL-----EESGEQGR------------LGKVK 218
G VP+VVT ++ LC R MD E++ + S + LG+ K
Sbjct: 301 KGVVPNVVTYNSIVHALCK-ARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWK 359
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+ KEM R+G +P++ T+N L+ S C+ A ++F+ + G + ++Y L+
Sbjct: 360 EAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILL 419
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G + GR D + M D+ G +N ++ + DEAL +M +
Sbjct: 420 HGYATEGRFVDMNNLFHSMTDN--GIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQG 477
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P V + I C G + DA QMI G PN V+Y LI +C + +A
Sbjct: 478 VSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAK 537
Query: 397 ELMKEMTGHGY-LPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHY 452
EL+ EM G P + F++++ LC +G V A LV I G P +
Sbjct: 538 ELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLV------IHIGDRPDIFTF 591
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ LI C G A +L MV G PD +T+++L+
Sbjct: 592 NSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI 630
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 192/439 (43%), Gaps = 63/439 (14%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G D +Y +++ GL + + L + M +GV PN V YN+++H+LCK + +A
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326
Query: 136 ----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R + + +P++VT++ +I Y A + ++ G +PD+VT +++
Sbjct: 327 ELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDS 386
Query: 192 LCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPN 235
LC R +A EI +G G+ M G + +
Sbjct: 387 LCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVAD 446
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+NILI+++ + G++D AL +F +M+ G+S N VTY T+I LC GR+ D
Sbjct: 447 SHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLAD------ 500
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
A+E L QM L P V I GFC
Sbjct: 501 -------------------------------AMEKLSQMISIGLKPNTVVYHSLIQGFCT 529
Query: 354 DGNVEDAKRCFDQMIEEG-GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G++ AK +M+++G PN+ + +IH+ C E RV A ++ + G P
Sbjct: 530 HGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIF 589
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
TFN+++ G C G + A +++ + G+ P YS LI + G +L
Sbjct: 590 TFNSLIDGYCLVGKMDKAFGVLDA---MVSAGTEPDVVTYSTLINGYFKSGRIDDGLILF 646
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M+ K + P +T++ +L
Sbjct: 647 REMLCKRVKPTTVTYSLVL 665
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 131/551 (23%), Positives = 235/551 (42%), Gaps = 71/551 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVK-EDIDLA 64
PD + VI GL M ++ KA +L + + P++ +NSI+ L K +D A
Sbjct: 270 PDVVSYTMVIHGL---FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R+ M + +Q D+ TY ++ G R + K+ M G+ P+ V +N+L+
Sbjct: 327 ELVLRQ-MFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMD 385
Query: 125 SLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVN--------------- 165
SLCK+ + A S+ + +P+ +++SIL+ Y E V+
Sbjct: 386 SLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVA 445
Query: 166 --------------------ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
AL++ + G P+VVT V+ LC +GR+ DA+E L
Sbjct: 446 DSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKL 505
Query: 206 EESGEQGRLGK-------VKGGC---------RFLKEMERKGC-LPNVDTYNILISSYCE 248
+ G ++G C + EM +G PN+ ++ +I S C
Sbjct: 506 SQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCN 565
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G + +A DVFN + G + T+++LI G C G++D +L M + G++ +
Sbjct: 566 EGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSA--GTEPDV 623
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y++++ G ++ + D+ L ++M +++ P V SL + G G AK+ F +
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
MIE G ++ Y ++ C+ EA L ++ + NT++ L +
Sbjct: 684 MIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKR 743
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
A L G +P + Y +I L ++G + A ++ M G P
Sbjct: 744 REEAHDLFASVS---ASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRL 800
Query: 487 WNSLLICLSQQ 497
N ++ L Q+
Sbjct: 801 LNDIIRMLLQK 811
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 126/260 (48%), Gaps = 7/260 (2%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
V TY IL+ C D F + G+ + + +T ++ LC R D+ L +L
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML 223
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGF 351
L S+ G YN+V+ L ++ EAL+ L +M K P V ++ I G
Sbjct: 224 -LHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL 282
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
++G + A F++M+++G VPNVV Y+ ++HA C+ + +A ++++M + P
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T+ ++ G G A K+ +E R G +P ++ L+ +LC+ + A+ +
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTR---EGLIPDIVTFNSLMDSLCKHKRSKEAAEI 399
Query: 472 LVQMVGKGILPDYLTWNSLL 491
+ KG PD ++++ LL
Sbjct: 400 FHSIATKGHKPDIISYSILL 419
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKR------CFDQMIEEGGVPNVVIYDCLIHAYCQ 388
E+ PR V ++ G +D A+R F +++ G + ++ + + C
Sbjct: 154 EEAGPRVVPLTVHTYGILMDCCCR-ARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCY 212
Query: 389 EERVREA-SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+R EA S L+ M+ G +P A ++NTV+ LC AL ++ +G G P
Sbjct: 213 AKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKG--DGCSP 270
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y+ +I L +G A L +MV KG++P+ +T+NS++ L +
Sbjct: 271 DVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCK 319
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 229/504 (45%), Gaps = 49/504 (9%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+A LV N P + ++ L + + + +M A+ + TY+ L+ G
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
++G ++L++M G P+ I+N+L+H+ C +G A L+ M + P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 148 VTFSILICAYCKEENLVNA--LVLLEKSFS----FGFVPDVVTITKVLELLCSVGRVMDA 201
V ++ILI + C +++ +N L L EK++S G V + + ++ LCS G+ A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 202 VEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ E QG + K++ +EM+R G + +V TY I++ S
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+++ A FN+M+ G + N VTY LI ++ ++ + M EG
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM--LSEGCL 585
Query: 306 GRISPYNSVLYGLYRENQQDEALE----------------YLKQME--KLFPRAVDRSLK 347
I Y++++ G + Q ++A + Y KQ + P V
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ GFC VE+A++ D M EG PN ++YD LI C+ ++ EA E+ EM+ HG+
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+++++ + A K++ + + P Y+ +I LC+ G
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLS---KMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L+ M KG P+ +T+ +++
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMI 786
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 218/464 (46%), Gaps = 27/464 (5%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ G D TY+ ++ LC +++ F L MK G+ + Y ++ S CK
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR ++M E PN VT++ LI AY K + + A L E S G +P++VT
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ +++ C G+V A +I E + V + K+ + PNV TY L+
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVD---MYFKQYDDNSERPNVVTYGALLDG 648
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C++ ++ A + + M ++G N + YD LI GLC G++D+ ++ M S+ G
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFP 706
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+S++ ++ +QD A + L +M P V + I G C G ++A +
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y +I + ++ EL++ M G P T+ ++ C+
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPG-SGHYSPLIKALCEKGGFQS---ASMLLVQMVGKG 479
G + A L+EE + + P + Y +I+ GF S+ L+ +G+
Sbjct: 827 NGALDVAHNLLEE----MKQTHWPTHTAGYRKVIE------GFNKEFIESLGLLDEIGQD 876
Query: 480 ILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHELSA 521
+L+ LLI + Q + L LL E+ +F + + S+
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 207/477 (43%), Gaps = 49/477 (10%)
Query: 40 FNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
F PS +N ++ +K D + + ++M + ++ D +T LC +VG
Sbjct: 229 FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC---KVGK 285
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
+ L ++++ P++V Y LI LC+ A ++ M PN VT+S L+C
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
++ L +L G P ++ C+ SG+
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT-------------SGDHSYAY 392
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYC------ETGVLDSALDVFNDMKIDGISW 269
K+ LK+M + G +P YNILI S C +LD A +++M G+
Sbjct: 393 KL------LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N + + R LCS G+ + +++ M +G S Y+ VL L ++ + A
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREM--IGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M++ L ++ + FC G +E A++ F++M E G PNVV Y LIHAY
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE-----EDMRGI- 441
+ ++V A+EL + M G LP T++ ++ G C+ G V A ++ E +D+ +
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 442 -------GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y L+ C+ + A LL M +G P+ + +++L+
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 181/390 (46%), Gaps = 47/390 (12%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+D+ Y K+ + + + TY L+ G C ++RV + KLL M G +PN ++Y
Sbjct: 622 DVDM----YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFSILICAYCKEENLVNALVLLEKSFS 175
+ LI LCK GK+ A+ + ++M E P + T+S LI Y K + A +L K
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
P+VV T++++ LC VG+ +A ++++ ME KGC PN
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM-------------------MEEKGCQPN 778
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY +I + G +++ L++ M G++ N+VTY LI C G +D +L+
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 296 LMEDSK-----EGSKGRISPYNSVL---YGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
M+ + G + I +N GL E QD+ +L ++ +D +K
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFL----SVYRLLIDNLIK 894
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+E A R +++ V Y+ LI + C +V A +L EMT
Sbjct: 895 A------QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
G +P +F +++ GL R + AL L++
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+ TYN LI ++ + LDSA + +M + + + T LC G+ + L +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGF 351
++ E Y ++ GL + +EA+++L +M P V S + G
Sbjct: 293 VE-----TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+ KR + M+ EG P+ I++ L+HAYC A +L+K+M G++P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 412 STFNTVLSGLCRQGNVGTA--LKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+N ++ +C + L L E+ + G + + S + LC G ++ A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
++ +M+G+G +PD T++ +L L + L LL E
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 210/455 (46%), Gaps = 52/455 (11%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV---GDGFK------------------ 102
A++F + ++ SG G + + + G C + R G ++
Sbjct: 9 AKSFLHRNLLYSGNSGTSPSSSFSICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDL 68
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
H+++ R + P+ ++ L+ ++ K K L M+ N T +IL+ +C
Sbjct: 69 FFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ L AL L K G P +VT +L C RV DA+ + +
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD------------ 175
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
+M G PNV YN +I C++ +D+ALD+ N M+ DGI + VTY++LI
Sbjct: 176 -------QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
GLCS GR D +++ M +K + +N+++ +E + EA E+ ++M
Sbjct: 229 SGLCSSGRWSDATRMVSCM--TKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
L P V SL I G C+ +++A+ F M+ +G P+VV Y LI+ YC+ ++V
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+L EM+ G + T+ ++ G CR G + A ++ R + G P Y+ L+
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR---RMVFCGVHPNIITYNVLL 403
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ G + A ++L M G+ D +T+N ++
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 202/432 (46%), Gaps = 28/432 (6%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-E 59
H +Q P SI F ++ + + + + V+ + + + +L N +L+ +
Sbjct: 71 HMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCS 130
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+ LA +F KM+ G + T+ L+ G C +RV D + M G KPN VIY
Sbjct: 131 QLSLALSFL-GKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY 189
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NT+I LCK+ +V A L++ ME+ P+ VT++ LI C +A ++
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCRF--LKE 226
PDV T +++ GRV +A E EE + + G C + L E
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 227 MER-------KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
E KGC P+V TY+ILI+ YC++ ++ + +F +M G+ N VTY LI+
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C G+++ +I + M G I YN +L+GL + ++AL L M+K +
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFC--GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
V ++ I G C G V DA + + +G +P++ Y ++ ++ REA
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 398 LMKEMTGHGYLP 409
L ++M G LP
Sbjct: 488 LFRKMKEDGILP 499
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/434 (27%), Positives = 194/434 (44%), Gaps = 62/434 (14%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
H+++ R + P+ ++ L+ ++ K K L M+ N T +IL+ +C
Sbjct: 69 FFHMVQCRPL-PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ L AL L K G P +VT +L C RV DA+ + ++
Sbjct: 128 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ----------- 176
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M G PNV YN +I C++ +D+ALD+ N M+ DGI + VTY++LI
Sbjct: 177 --------MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 279 RGLCSGGRIDDGLKILQLMEDS-----------------KEGSKGR-------------- 307
GLCS GR D +++ M KEG
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 308 --ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
I Y+ ++YGL ++ DEA E M + FP V S+ I G+C VE +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F +M + G V N V Y LI YC+ ++ A E+ + M G P T+N +L GLC
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD 408
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G + AL ++ DM+ G + + Y+ +I+ +C+ G A + + +G++PD
Sbjct: 409 NGKIEKAL-VILADMQKNGMDADIVT--YNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 484 YLTWNSLLICLSQQ 497
T+ ++++ L ++
Sbjct: 466 IWTYTTMMLGLYKK 479
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 171/374 (45%), Gaps = 29/374 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P F +++ G R + D + D + P++ I+N+I+D L K + +D A
Sbjct: 149 PSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M G+ D TY L+ GLC + R D +++ M R + P+ +N LI +
Sbjct: 209 L-NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+V A +M +P+ VT+S+LI C L A + S G PDVV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C + KV+ G + EM ++G + N TY ILI
Sbjct: 328 TYSILINGYC-------------------KSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G L+ A ++F M G+ N +TY+ L+ GLC G+I+ L IL M+ K G
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ--KNG 426
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
I YN ++ G+ + + +A + + + L P + +LG G +A
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREAD 486
Query: 362 RCFDQMIEEGGVPN 375
F +M E+G +PN
Sbjct: 487 ALFRKMKEDGILPN 500
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 372 GVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G+P N+ + L++ +C+ ++ A + +M G+ P TF ++L+G CR V A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L + ++ +G G P Y+ +I LC+ +A LL +M GI PD +T+NSL
Sbjct: 171 LYMFDQ---MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 491 LICLSQQTTW 500
+ L W
Sbjct: 228 ISGLCSSGRW 237
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 141/562 (25%), Positives = 250/562 (44%), Gaps = 84/562 (14%)
Query: 14 FITVIRGLGRA---RMINDVVKA---TDLVSRFNMTPSLK---IFNSILDVLVKEDIDLA 64
F+ V+ GRA ++N ++A T+ S + P ++ +N +L L + DL
Sbjct: 35 FLAVLLRRGRADAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLR 94
Query: 65 RAFYRKKMMA----SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+A M+ + + +Y ++M+GLC + R + LL M++ GV+ + V Y
Sbjct: 95 QALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYG 154
Query: 121 TLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
TLI LC ++ A L+ +M PN + +S L+ YC+ + + E+
Sbjct: 155 TLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRL 214
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G PDV+ T ++ LC GR+ AV++ + M ++G PNV
Sbjct: 215 GVEPDVIMFTGFIDDLCKKGRIGKAVKVKDI-------------------MVQRGLEPNV 255
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN+LI+ C+ G + AL + N+M G++ + VTY+TLI GL +D + +L+
Sbjct: 256 VTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEE 315
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
M + + +NSV++GL + + +A+ + M + V + I GF
Sbjct: 316 MIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRV 375
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG-------Y 407
V A ++I G P+ Y LI+ + + V A ++ MT G Y
Sbjct: 376 HKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHY 435
Query: 408 LPI---------------------------ASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+P+ A ++T++ G C+ G++ A +L+ +DM
Sbjct: 436 IPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLL-QDM-- 492
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ G P + YS LI + G + A +L QM G +PD ++SL+ S +
Sbjct: 493 LDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQ- 551
Query: 501 LLLLLLNEMVSFVMVVHELSAK 522
+N+++ +HE+ AK
Sbjct: 552 -----INKILDL---IHEMRAK 565
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 210/436 (48%), Gaps = 32/436 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAF 67
D + T+IRGL A ++ ++ + + P++ +++ +L + D+++ F
Sbjct: 149 DVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVF 208
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M GV+ D + + LC R+G K+ +M RG++PN V YN LI+ LC
Sbjct: 209 --EEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLC 266
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV--PD 181
K G V A +L ++M++ P+ VT++ LI + A+ LLE+ + PD
Sbjct: 267 KEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPD 326
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VVT V+ LC +GR+ A+ + E E +GC+ N+ TYN
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAE-------------------RGCMCNLVTYNY 367
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI + ++ A+++ +++ G+ + TY LI G +D L+ M ++
Sbjct: 368 LIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTM--TQ 425
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-KLFPRAVDRSLKILGFCVDGNVEDA 360
G + + Y +L L + ++A+ +M+ AV S + G C G+++ A
Sbjct: 426 RGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAA 485
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K+ M++EG P+ V Y LI+ + + + EA ++K+M G++P + F++++ G
Sbjct: 486 KQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKG 545
Query: 421 LCRQGNVGTALKLVEE 436
+G + L L+ E
Sbjct: 546 YSAEGQINKILDLIHE 561
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 127/275 (46%), Gaps = 24/275 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +VI GL + + + ++++ +L +N ++ ++ +++A
Sbjct: 325 PDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNL 384
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++SG++ D +TY+IL+ G V L M RG++ Y L+ +LC
Sbjct: 385 M-SELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALC 443
Query: 128 KNGKVGRARSLMSDMEEP---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ G + +A L ++M+ + V +S ++ CK ++ A LL+ G PD VT
Sbjct: 444 QLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVT 503
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ + +LG ++ R LK+M G +P+V ++ LI
Sbjct: 504 YSILINMF-------------------AKLGDLEEAERVLKQMAASGFVPDVAVFDSLIK 544
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
Y G ++ LD+ ++M+ ++ + TL+R
Sbjct: 545 GYSAEGQINKILDLIHEMRAKNVAIDPKFICTLVR 579
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 197/400 (49%), Gaps = 32/400 (8%)
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVN 165
V + RG N+ Y T++H L K+ K +++ M + C + E +N
Sbjct: 83 VAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQM--------TYETCKF-HEGIFLN 133
Query: 166 ALVLLEK-SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
+ K S V I ++ S+ + + +L ES + V +FL
Sbjct: 134 LMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQ------VDLTRKFL 187
Query: 225 KEMERKGCL-PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW-NFVTYDTLIRGLC 282
++ L PN +NIL+ +C+ G +DSA +V +MK +S+ N +TY TLI GLC
Sbjct: 188 LNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLC 247
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK-- 336
GR+ + +++ + M SK +I P YN+++ G + D AL+ ++ M+K
Sbjct: 248 GSGRLKEAIELFEEM-----VSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNG 302
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P + S + GFC +G +E+AK FD+M G P+ V Y LI+ +C+ RV EA
Sbjct: 303 CNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAM 362
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
EL+K+M + TFN +L GLCR+G A ++E R G Y ++
Sbjct: 363 ELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLE---RLPYEGVYLNKASYRIVL 419
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+LC +G Q A+ L+ M+G+G+LP + T N LL+ L +
Sbjct: 420 NSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCE 459
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 212/474 (44%), Gaps = 100/474 (21%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRF-NMTPSLKIFNSILDVLVKED-IDLARAFY 68
E IF+ +++ + + VV+ D + PSLK ++ L++LV+ + +DL R F
Sbjct: 128 EGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKF- 186
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
LL+ KS ++PN+ I+N L+ CK
Sbjct: 187 ----------------------------------LLNSKKSLNLEPNTCIFNILVKHHCK 212
Query: 129 NGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG-FVPDV 182
NG + A ++ +M++ PN +T+S LI C L A+ L E+ S +PD
Sbjct: 213 NGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDA 272
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T ++ C +V A++I+E M++ GC PNV Y+ L
Sbjct: 273 LTYNALINGFCHGEKVDRALKIME-------------------FMKKNGCNPNVFNYSAL 313
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
++ +C+ G L+ A +VF++MK G+ + V Y TLI C GR+D+ +++L+ M ++K
Sbjct: 314 MNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENK- 372
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ +N +L GL C +G E+A+
Sbjct: 373 -CRADTVTFNVILGGL---------------------------------CREGRFEEARG 398
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+++ EG N Y ++++ C+E +++A++L+ M G G LP +T N +L LC
Sbjct: 399 MLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLC 458
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
G VG A+ + + + G P ++ L++ +C + A LL +V
Sbjct: 459 EAGKVGDAVMAL---LGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 26/262 (9%)
Query: 1 MPHSIQSPPDESIFITVIRGL-GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK- 58
M S S P+ + T+I GL G R+ + ++VS+ + P +N++++
Sbjct: 226 MKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHG 285
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
E +D A + M +G + + Y+ LM G C R+ + ++ MKS G+KP++V
Sbjct: 286 EKVDRALKIM-EFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVG 344
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
Y TLI+ C+ G+V A L+ DM E + VTF++++ C+E A +LE+
Sbjct: 345 YTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLP 404
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
G + + VL LC G + A ++ +G + G +G LP
Sbjct: 405 YEGVYLNKASYRIVLNSLCREGELQKATQL---------VGLMLG----------RGVLP 445
Query: 235 NVDTYNILISSYCETGVLDSAL 256
+ T N L+ CE G + A+
Sbjct: 446 HFATSNELLVHLCEAGKVGDAV 467
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 29/491 (5%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDD-YTYAI 86
DV A L+ P +N ++ V D+D+A A R+ + G D ++Y +
Sbjct: 140 DVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNV 199
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG---RAR-SLMSDM 142
++ GL + + D K+ M GV PN + YNT+I K G + R R ++ D
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+PN VT+++L+ C+ + L+++ S +PD T + + + L G +
Sbjct: 260 PKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTML 319
Query: 203 EILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+ ES ++G + GKV + + + G +P YN LI+ Y
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGY 379
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ L A +F MK I + +TY+ LI GLC + ++ ME K G
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME--KSGVDP 437
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ +N+++ Q ++ L M++ + + + FC +G + +A
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D MI + PN +Y+ +I AY + +A L+++M G T+N +L GLCR
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRS 557
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A +L+ +R +G P Y+ +I A C KG A LL +M GI P
Sbjct: 558 SQIDEAEELIYT-LR--NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTL 614
Query: 485 LTWNSLLICLS 495
T ++L+ L+
Sbjct: 615 RTCHTLVSALA 625
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 227/518 (43%), Gaps = 67/518 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + VI GL R+ +D +K D + + P+ +N+++D VK DL F
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGG-DLEAGF 249
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
R +M+ G + + TY +L+ GLC T R+ + L+ M S + P+ Y+ L
Sbjct: 250 RLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGL 309
Query: 123 -------------------------------IHSLCKNGKVGRARSLMSDMEE----PND 147
++ LCK+GKV +A+ + + P
Sbjct: 310 TRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTT 369
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
V ++ LI YC+ +L A + E+ S PD +T ++ LC + V A +++
Sbjct: 370 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV-- 427
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
EME+ G P+V+T+N LI +Y G L+ V +DM+ GI
Sbjct: 428 -----------------MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ +++ ++++ C G+I + + IL M ++ YNS++ ++A
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV--YNSIIDAYIESGDTEQA 528
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
L +++M+ + V +L + G C +++A+ + +G P+VV Y+ +I A
Sbjct: 529 LLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C + +A EL++EM +G P T +T++S L G V L ++ + +
Sbjct: 589 CCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLH---KNV 645
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
P S Y ++ A + L +M KGI D
Sbjct: 646 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 5/261 (1%)
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP++ + N+L+ S G F + G + ++ +++ + G +D L
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILG 350
+L+ M S+ YN V+ GL+R + +AL+ +M + P + + I G
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
G++E R DQM+ +G PNVV Y+ L+ C+ R+ E LM EM H LP
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T++ + GL R G T L L E ++ +G + G+ S L+ LC+ G A
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLK---KGVMLGAYTCSILLNGLCKDGKVAKAKQ 355
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+ +V G++P + +N+L+
Sbjct: 356 VFEMLVHTGLVPTTVIYNTLI 376
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 184/373 (49%), Gaps = 27/373 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
KK+ V D Y I++ LC V D ++L M ++ + P+ V +N+LI C
Sbjct: 188 KKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVV 247
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G++ A L +M P+ TFSIL+ A CK+ N+ A +L G +PDVVT
Sbjct: 248 GQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTY 307
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ +++ C V V A + M R G P+ +YNI+I+
Sbjct: 308 SSLMDGYCLVNEVNKAKHVFST-------------------MSRLGVAPHAHSYNIMING 348
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ ++D AL +F +M GI+ + VTY++LI GLC GRI +++ M ++ G
Sbjct: 349 LGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNN--GIP 406
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
I YNS++ L + + D+A+ +K++ + + P ++ I G C G +++A+
Sbjct: 407 ADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDV 466
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F ++ +G N Y+ +I+ C+E EA L+ +M +G +P A T+ T++ L R
Sbjct: 467 FQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFR 526
Query: 424 QGNVGTALKLVEE 436
+ A KL+ E
Sbjct: 527 KDENEKAEKLLRE 539
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 220/463 (47%), Gaps = 32/463 (6%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+TP++ FN +++ ++ A + + K++ G T+ L+ G+CL ++ +
Sbjct: 90 ITPTIVTFNILVNCYCHLGEMTFAFSIF-AKILKLGYHPTTITFNTLINGICLNGKLKEA 148
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICA 156
+ + G + V Y TLI+ LCK G+ A ++ +E + V ++I+I +
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
CK++ + +A L + + PDVVT ++ C VG++ +A + E
Sbjct: 209 LCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHE--------- 259
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M K P+V T++IL+ + C+ G + A ++ M G+ + VTY +
Sbjct: 260 ----------MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSS 309
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-- 334
L+ G C ++ + M S+ G YN ++ GL + DEAL K+M
Sbjct: 310 LMDGYCLVNEVNKAKHVFSTM--SRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCC 367
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ + P V + I G C G + A + D+M G +++ Y+ LI C+ + +
Sbjct: 368 KGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDK 427
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A L+K++ G P T+N ++ GLC+ G + A + ++ + +G + Y+
Sbjct: 428 AIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLI---KGYSVNAWTYNI 484
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+I LC++G F A +LL +M GI+PD +T+ +++ L ++
Sbjct: 485 MINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRK 527
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 200/469 (42%), Gaps = 94/469 (20%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
+N+ V + + R TPS+ FN IL +VK + + YT AI
Sbjct: 38 VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKAN------------------NNHYTTAI 79
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---- 142
L H ++ +G+ P V +N L++ C G++ A S+ + +
Sbjct: 80 ---------------SLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLG 124
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P +TF+ LI C L AL + + GF D V+ ++ LC
Sbjct: 125 YHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC--------- 175
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++G+ + + LK++E K +V YNI+I+S C+ + A ++++M
Sbjct: 176 ----------KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEM 225
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
IS + VT+++LI G C G++ + +GL+ E
Sbjct: 226 ITKRISPDVVTFNSLILGFCVVGQLKEA-------------------------FGLFHE- 259
Query: 323 QQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
++ + P S+ + C DGN+ AK M+++G +P+VV Y L
Sbjct: 260 ---------MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSL 310
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ YC V +A + M+ G P A ++N +++GL + V AL L +E
Sbjct: 311 MDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKE---MCC 367
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G P + Y+ LI LC+ G A L+ +M GI D LT+NSL+
Sbjct: 368 KGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLI 416
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 171/346 (49%), Gaps = 24/346 (6%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNS-ILDVLVKEDIDLARAFY 68
D ++ +I L + + ++D + + ++P + FNS IL V + A +
Sbjct: 198 DVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLF 257
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M+ + D YT++IL+ LC + +L VM +GV P+ V Y++L+ C
Sbjct: 258 HE-MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCL 316
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+V +A+ + S M P+ +++I+I K + + AL L ++ G PD VT
Sbjct: 317 VNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVT 376
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++ LC +GR+ A ++++E G + + +K+++
Sbjct: 377 YNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIK 436
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G P++ TYNILI C+ G L +A DVF D+ I G S N TY+ +I GLC G +
Sbjct: 437 DQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFN 496
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ +L ME++ G Y +++ L+R+++ ++A + L++M
Sbjct: 497 EAEVLLSKMENN--GIIPDAVTYETIIRALFRKDENEKAEKLLREM 540
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 229/504 (45%), Gaps = 49/504 (9%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+A LV N P + ++ L + + + +M A+ + TY+ L+ G
Sbjct: 288 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
++G ++L++M G P+ I+N+L+H+ C +G A L+ M + P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 148 VTFSILICAYCKEENLVNA--LVLLEKSFS----FGFVPDVVTITKVLELLCSVGRVMDA 201
V ++ILI + C +++ +N L L EK++S G V + + ++ LCS G+ A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 202 VEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ E QG + K++ +EM+R G + +V TY I++ S
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+++ A FN+M+ G + N VTY LI ++ ++ + M EG
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM--LSEGCL 585
Query: 306 GRISPYNSVLYGLYRENQQDEALE----------------YLKQME--KLFPRAVDRSLK 347
I Y++++ G + Q ++A + Y KQ + P V
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ GFC VE+A++ D M EG PN ++YD LI C+ ++ EA E+ EM+ HG+
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+++++ + A K++ + + P Y+ +I LC+ G
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLS---KMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L+ M KG P+ +T+ +++
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMI 786
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 218/464 (46%), Gaps = 27/464 (5%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ G D TY+ ++ LC +++ F L MK G+ + Y ++ S CK
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR ++M E PN VT++ LI AY K + + A L E S G +P++VT
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ +++ C G+V A +I E + V + K+ + PNV TY L+
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVD---MYFKQYDDNSERPNVVTYGALLDG 648
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C++ ++ A + + M ++G N + YD LI GLC G++D+ ++ M S+ G
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFP 706
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+S++ ++ +QD A + L +M P V + I G C G ++A +
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y +I + ++ EL++ M G P T+ ++ C+
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPG-SGHYSPLIKALCEKGGFQS---ASMLLVQMVGKG 479
G + A L+EE + + P + Y +I+ GF S+ L+ +G+
Sbjct: 827 NGALDVAHNLLEE----MKQTHWPTHTAGYRKVIE------GFNKEFIESLGLLDEIGQD 876
Query: 480 ILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHELSA 521
+L+ LLI + Q + L LL E+ +F + + S+
Sbjct: 877 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 920
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 207/477 (43%), Gaps = 49/477 (10%)
Query: 40 FNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
F PS +N ++ +K D + + ++M + ++ D +T LC +VG
Sbjct: 229 FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC---KVGK 285
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
+ L ++++ P++V Y LI LC+ A ++ M PN VT+S L+C
Sbjct: 286 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
++ L +L G P ++ C+ SG+
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT-------------SGDHSYAY 392
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYC------ETGVLDSALDVFNDMKIDGISW 269
K+ LK+M + G +P YNILI S C +LD A +++M G+
Sbjct: 393 KL------LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N + + R LCS G+ + +++ M +G S Y+ VL L ++ + A
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREM--IGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M++ L ++ + FC G +E A++ F++M E G PNVV Y LIHAY
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE-----EDMRGI- 441
+ ++V A+EL + M G LP T++ ++ G C+ G V A ++ E +D+ +
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 624
Query: 442 -------GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y L+ C+ + A LL M +G P+ + +++L+
Sbjct: 625 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 181/390 (46%), Gaps = 47/390 (12%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+D+ Y K+ + + + TY L+ G C ++RV + KLL M G +PN ++Y
Sbjct: 622 DVDM----YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFSILICAYCKEENLVNALVLLEKSFS 175
+ LI LCK GK+ A+ + ++M E P + T+S LI Y K + A +L K
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 737
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
P+VV T++++ LC VG+ +A ++++ ME KGC PN
Sbjct: 738 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM-------------------MEEKGCQPN 778
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY +I + G +++ L++ M G++ N+VTY LI C G +D +L+
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 296 LMEDSK-----EGSKGRISPYNSVL---YGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
M+ + G + I +N GL E QD+ +L ++ +D +K
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFL----SVYRLLIDNLIK 894
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+E A R +++ V Y+ LI + C +V A +L EMT
Sbjct: 895 A------QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
G +P +F +++ GL R + AL L++
Sbjct: 949 GVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+ TYN LI ++ + LDSA + +M + + + T LC G+ + L +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGF 351
++ E Y ++ GL + +EA+++L +M P V S + G
Sbjct: 293 VE-----TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+ KR + M+ EG P+ I++ L+HAYC A +L+K+M G++P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 412 STFNTVLSGLCRQGNVGTA--LKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+N ++ +C + L L E+ + G + + S + LC G ++ A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
++ +M+G+G +PD T++ +L L + L LL E
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 507
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 138/312 (44%), Gaps = 26/312 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P++ ++ +I GL + +++ + +S +L ++S++D K + DLA
Sbjct: 672 PNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM+ + + Y ++ GLC + + +KL+ +M+ +G +PN V Y +I
Sbjct: 732 L-SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GK+ L+ M PN VT+ +LI CK L A LLE+ +
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
KV+E ++++ +L+E G+ + +++ R L+E+
Sbjct: 851 GYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 228 ERKGC--LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+ TYN LI S C +++A +F++M G+ ++ +LI+GL
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 286 RIDDGLKILQLM 297
+I + L +L +
Sbjct: 969 KISEALLLLDFI 980
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 36/270 (13%)
Query: 31 VKATDLVSRF-------NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS-GVQGDDY 82
VK DL S+ + P++ I+ ++D L K A+ +MM G Q +
Sbjct: 722 VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG-KTDEAYKLMQMMEEKGCQPNVV 780
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY ++ G + ++ +LL M S+GV PN V Y LI CKNG + A +L+ +M
Sbjct: 781 TYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Query: 143 EEPNDVT----FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
++ + T + +I + KE + +L LL++ P + +++ L R+
Sbjct: 841 KQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 199 MDAVEILEE-----------SGEQGRL-------GKVKGGCRFLKEMERKGCLPNVDTYN 240
A+ +LEE S L KV+ + EM +KG +P + ++
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 241 ILISSYCETGVLDSA---LDVFNDMKIDGI 267
LI + A LD + M+I I
Sbjct: 959 SLIKGLFRNSKISEALLLLDFISHMEIQWI 988
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 223/492 (45%), Gaps = 58/492 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE ++ L + + + K D++SR N P+ +++ LV+ +
Sbjct: 21 DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M+ SG+ D TY +++ G C ++ LL M G P+ + YNT+I SL N
Sbjct: 81 KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140
Query: 130 GKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK +A R + P + ++ILI K V AL +LE G PD+VT
Sbjct: 141 GKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTY 200
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG---------RLGKVKGGCRFLKE-------MER 229
++ G+ DA I+ G L C E M++
Sbjct: 201 NSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKK 260
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
P V TYNILI+ C+ G+++ A++ F M + S + +TY+TL+ LC G +D+
Sbjct: 261 TSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDE 320
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL 349
L++ L+ DS S G I+ YN+V+ GL R DEAL
Sbjct: 321 ALQVFVLLSDSN-CSPGLIT-YNTVIDGLTRRGYMDEAL--------------------- 357
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+ ++QMIE+G P+ + + L+ +C ++V +A E+++EM +
Sbjct: 358 ------------KLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRI 405
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
+S + V++GLCR V A++++E + G + P YS LIK++ + G + A
Sbjct: 406 NSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYK---PDEEIYSTLIKSVADAGMVEEAD 462
Query: 470 MLLVQMVGKGIL 481
L +++ + +L
Sbjct: 463 ELHQKLIERKVL 474
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 185/405 (45%), Gaps = 30/405 (7%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V+ D+ T ++ LC + + KL+ +M PNS LI L + G++ RA
Sbjct: 18 VENDEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERAS 77
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ M P+ +T+++++ +CK L +A+ LLE G PDV+T ++ L
Sbjct: 78 RVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSL 137
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
G+ AVE F + R+GCLP + Y ILI +
Sbjct: 138 FDNGKFDQAVE-------------------FWRGQLRRGCLPYLIPYTILIELVWKHCGT 178
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
AL+V DM I+G + VTY++L+ G+ +D I+ + G + YN
Sbjct: 179 VRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNI--LSHGMEPNAITYN 236
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
S+L+ L DE E L M+K P V ++ I G C G VE A F QM+ E
Sbjct: 237 SLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSE 296
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
P+++ Y+ L+ A C+E V EA ++ ++ P T+NTV+ GL R+G + A
Sbjct: 297 NCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEA 356
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
LKL + I +G P + L+ C + A +L +M
Sbjct: 357 LKLYNQ---MIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREM 398
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 157/335 (46%), Gaps = 23/335 (6%)
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
D T ++L LC G +M+A ++++ R+G+++ R L
Sbjct: 21 DEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVL 80
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K M G +P+V TYN+++ +C+ L SA+D+ DM + G + +TY+T+IR L
Sbjct: 81 KTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDN 140
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G+ D ++ + + G + PY ++ +++ ALE L+ M E +P V
Sbjct: 141 GKFDQAVEFWR--GQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLV 198
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ + +G EDA ++ G PN + Y+ L+H+ C E E++ M
Sbjct: 199 TYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIM 258
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+ P T+N +++GLC+ G V A+ ++ + P Y+ L+ ALC++
Sbjct: 259 KKTSHPPTVVTYNILINGLCKCGLVERAINFF---VQMVSENCSPDIITYNTLLTALCKE 315
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G A + V + P +T+N+++ L+++
Sbjct: 316 GMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRR 350
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N +L+ L ++ EA + + M ++ P + + I G G +E A R M+
Sbjct: 26 NEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVM 85
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G VP+V+ Y+ ++ +C+ ++R A +L+++M+ G P T+NT++ L G
Sbjct: 86 SGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQ 145
Query: 430 ALKLVEEDMR---------------------GIGR-----------GSLPGSGHYSPLIK 457
A++ +R G R G P Y+ L+
Sbjct: 146 AVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVN 205
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++G ++ A++++ ++ G+ P+ +T+NSLL L W
Sbjct: 206 FASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLW 248
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + T++ L + M+++ ++ L+S N +P L +N+++D L + +D A
Sbjct: 300 PDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKL 359
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +M+ G+ D T+ L+ G C ++V D ++L M R + NS Y +I+ LC
Sbjct: 360 Y-NQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLC 418
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILI 154
+N +V A ++S +P++ +S LI
Sbjct: 419 RNKRVDIAIQVLEMMISGRYKPDEEIYSTLI 449
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 234/515 (45%), Gaps = 56/515 (10%)
Query: 22 GRARMINDVV-KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGD 80
G+ R D++ +A D V P +N ++ L + + +M +S +
Sbjct: 260 GKCREAFDLIDEAEDFV------PDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPN 313
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
TY IL+ G ++G ++L +M + G PN I+N+LIH+ CK+ A L
Sbjct: 314 VVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFK 373
Query: 141 DME----EPNDVTFSILICAYCKEENLVNA--LVLLEKSFS----FGFVPDVVTITKVLE 190
M +P + ++I I + C E ++ L L+EK++S G V + V ++
Sbjct: 374 KMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFAR 433
Query: 191 LLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLP 234
LC G+ A +I+ E +G + KV+ +EM+R G +P
Sbjct: 434 CLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V TY ILI S+C+ G++ A F++M G + N VTY LI ++ ++
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---------EKLF------- 338
++M EG K + Y +++ G + Q ++A + +M +K F
Sbjct: 554 EMM--LLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNC 611
Query: 339 --PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P + + G C V++A D M+ G PN ++YD +I +C+ ++++A
Sbjct: 612 EGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQ 671
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
E+ +M+ GY P T+++ + L + + LK++ + + P Y+ ++
Sbjct: 672 EVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLS---KMLENSCTPNVVIYTEMV 728
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ G A L+++M KG P+ +T+ +++
Sbjct: 729 DGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMI 763
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 25/379 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+MM G DD TY+ ++ LC ++V F L MK G+ P+ Y LI S CK G
Sbjct: 450 EMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAG 509
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ +AR +M PN VT++ LI AY K + + A L E G P+VVT T
Sbjct: 510 LIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYT 569
Query: 187 KVLELLCSVGRVMDAVEILE------ESGEQGRLGKVKGGCRFLKEMERKGCL-PNVDTY 239
+++ C G++ A +I ES + + K ++ C PNV TY
Sbjct: 570 ALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFK----------LDHNNCEGPNVITY 619
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ C+ + A ++ + M G N + YD +I G C G++ D ++ M
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKM-- 677
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
S+ G + Y+S + L+++N+ D L+ L +M P V + + G C G
Sbjct: 678 SERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT 737
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++A + +M E+G PNVV Y +I + + ++ + EL ++M G P T+ +
Sbjct: 738 DEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVL 797
Query: 418 LSGLCRQGNVGTALKLVEE 436
++ C G + A KL++E
Sbjct: 798 INHCCSNGLLDEAYKLLDE 816
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/537 (22%), Positives = 228/537 (42%), Gaps = 49/537 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD+S + VI L A + + + R + PS+ + ++D K I AR +
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G + TY L+ ++ +L +M G KPN V Y LI C
Sbjct: 518 F-DEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC 576
Query: 128 KNGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNAL 167
K G++ +A + + M E PN +T+ L+ CK + A
Sbjct: 577 KAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
LL+ + G P+ + V++ C +G++ DA E+ +M
Sbjct: 637 ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV-------------------FTKM 677
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G PN+ TY+ I + LD L V + M + + N V Y ++ GLC G+
Sbjct: 678 SERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT 737
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D+ K++ ME+ +G + Y +++ G + + ++ LE + M + P +
Sbjct: 738 DEAYKLMLKMEE--KGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYR 795
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I C +G +++A + D+M + +++ + +I + QE + L+ E++ +
Sbjct: 796 VLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSEN 853
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+P+ S + ++ + G + AL L+EE + ++ Y+ LI+ L
Sbjct: 854 ESVPVDSLYRILIDNYIKAGRLEVALDLLEE-ISSSPSHAVSNKYLYASLIENLSHASKV 912
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAK 522
A L M+ K ++P+ L+ L + W L L++ + M +H L K
Sbjct: 913 DKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSIC-QMDIHWLQEK 968
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 127/540 (23%), Positives = 220/540 (40%), Gaps = 104/540 (19%)
Query: 40 FNMTPSLKIFNSILDVL---VKEDIDLARAFYRKKMMASGVQGDDYTY-----AILMKGL 91
++ TP ++F+ +LD+L V D + F + ++ DD+ L++
Sbjct: 135 YSHTP--QVFDKLLDLLGCNVNADDRVPLKFLME------IKDDDHELLRRLLNFLVRKC 186
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPND 147
C + L +K G KP+ YN LI + K+ A R ++S +
Sbjct: 187 CRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDR 246
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
T S + CK A L++++ FVPD V +++ LC +A++IL
Sbjct: 247 YTLSCFAYSLCKGGKCREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHR 304
Query: 208 -----------------SG--EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
SG +G+LG+ K R L M +GC PN + +N LI +YC+
Sbjct: 305 MRSSSCIPNVVTYRILLSGCLRKGQLGRCK---RILSMMITEGCYPNREIFNSLIHAYCK 361
Query: 249 -----------------------------------------TGVLDSALDVFNDMKIDGI 267
+ +LD +++M G+
Sbjct: 362 SRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGV 421
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
N V R LC G+ D KI + E +G S Y+ V+ L ++ ++A
Sbjct: 422 VLNKVNVSNFARCLCGAGKFDQAFKI--ICEMMGKGFVPDDSTYSKVIGFLCDASKVEKA 479
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
++M++ + P ++ I FC G ++ A++ FD+M+ +G PNVV Y LIHA
Sbjct: 480 FSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHA 539
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
Y + +++ A EL + M G P T+ ++ G C+ G + A ++ MRG S
Sbjct: 540 YLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR-MRGDIESS 598
Query: 446 L--------------PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y L+ LC+ + A LL M+ G P+ + +++++
Sbjct: 599 DMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVI 658
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 233/489 (47%), Gaps = 31/489 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I + ++ + + + +++P++ NS++ +K +
Sbjct: 362 PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKL 421
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +A G+ + +TY L+ LC ++ + + M +GV+P+ V YN +I C+
Sbjct: 422 FDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQ 480
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A + +M E PN +T+S+L+ Y K+ + A L ++ P T
Sbjct: 481 QGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFT 540
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC GR S Q RL K++ ++G +P TYN +I
Sbjct: 541 CNIIINGLCKAGRT---------SESQDRL----------KKLVQEGFIPTCMTYNCIID 581
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ + G ++SAL V+ +M G+S N TY LI G C +D LK++ M++ +G
Sbjct: 582 GFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKN--KGI 639
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ ++ Y +++ G R+ A + L ++++ L P V S I GF N+E A
Sbjct: 640 ELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALH 699
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+MI EG ++ IY LI +E ++ ASEL EM G +P T++ ++ GLC
Sbjct: 700 LHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLC 759
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+G + A K++E+ R + P Y+ LI ++G Q A L +M+ KG++P
Sbjct: 760 NKGQLENAQKILEDMDR---KCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVP 816
Query: 483 DYLTWNSLL 491
D T++ L+
Sbjct: 817 DDTTYDILV 825
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 130/513 (25%), Positives = 237/513 (46%), Gaps = 44/513 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
D +F ++ + + IND V + + ++ P L + N L LVK + I AR Y
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M + GV+GD T +++++ ++ + K++GV+ ++ Y+ +I ++CK
Sbjct: 213 NK-MASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCK 271
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A L+ +M + P++V F+ +I K+ ++ A+ + + S G +VV
Sbjct: 272 KPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVV 331
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C G + A+E+ + +M G PN TY ++I
Sbjct: 332 ATTLMKGYCKQGDLDSALELFD-------------------KMNENGICPNNVTYAVIIE 372
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ G +D A +++N MK IS ++LIRG ++ K L +++
Sbjct: 373 WCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK---LFDEAVACG 429
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YNS+L L +E + EA ++M + + P V + ILG C G+++ A
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F +M+E+G PN++ Y L+ Y ++ A L M G P T N +++GLC
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLC 549
Query: 423 RQGNVGTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ G + KLV+E G +P Y+ +I ++G SA + +M
Sbjct: 550 KAGRTSESQDRLKKLVQE-------GFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKI 602
Query: 479 GILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM 509
G+ P+ T+ +L+ C S L L +++EM
Sbjct: 603 GVSPNVFTYTNLINGFCKSNNMD-LALKVMDEM 634
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 148/305 (48%), Gaps = 23/305 (7%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR 65
+P D + I +I GL +A ++ + + P+ +N I+D VKE ++ A
Sbjct: 535 APSDFTCNI-IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSAL 593
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A Y +M GV + +TY L+ G C +N + K++ MK++G++ + +Y LI
Sbjct: 594 AVY-TEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDG 652
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ G + A L+S+++E PN V +S +I + K +N+ AL L ++ + G D
Sbjct: 653 FCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCD 712
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLK 225
+ T ++ L G+++ A E+ E +G + G+++ + L+
Sbjct: 713 LQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILE 772
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M+RK P V YN LI+ + + G L A + N+M G+ + TYD L+ G G
Sbjct: 773 DMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDG 832
Query: 286 RIDDG 290
+ G
Sbjct: 833 NLFSG 837
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 169/367 (46%), Gaps = 26/367 (7%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
E + F+ L+ +Y K + + +A+ VP + + L L + +A +
Sbjct: 151 ESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARD 210
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ + +G R GK++ + +E + KG + Y+I+I + C
Sbjct: 211 VYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVC 270
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC-SGGRIDDGLKILQLMEDSKEGSKG 306
+ +AL + +M+ G + V + +I G+C G++ + +K+ M G
Sbjct: 271 KKPDSVAALGLLREMRDKGWVPHEVIFTRVI-GVCMKQGKMLEAVKVKGEMLSC--GKPM 327
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ +++ G ++ D ALE +M + + P V ++ I C +GN++ A +
Sbjct: 328 NVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIY 387
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+QM + P V + LI Y + EAS+L E G + T+N++LS LC++
Sbjct: 388 NQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVF-TYNSLLSWLCKE 446
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A + E+ +R +G P Y+ +I C++G SA+ + V+M+ KG+ P+
Sbjct: 447 GKMSEACSIWEKMVR---KGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNL 503
Query: 485 LTWNSLL 491
+T++ L+
Sbjct: 504 ITYSVLM 510
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 215/481 (44%), Gaps = 34/481 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D I +++ G R + D +K DL+SR + SIL + E L AF
Sbjct: 229 DSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 70 KKMMA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M G Q TY +L+K LC + F L M +RG KPN Y LI LC+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCR 348
Query: 129 NGKV----GRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK+ G R ++ D P+ +T++ LI YCK+ +V A LL P+V T
Sbjct: 349 DGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++E LC VG+ AV +L+ + G R G + + L M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN 468
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
P+ T+ +I+++C+ G D A M GIS + VT TLI G+C+ G+
Sbjct: 469 SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528
Query: 289 DGLKILQLMEDSKEGSKGRISPY--NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
D L IL+ + + + +P+ N +L L + + E L L ++ K L P V
Sbjct: 529 DALFILETLVKMRMLT----TPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTY 584
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ + G G++ + R + M G +PNV Y +I+ CQ RV EA +L+ M
Sbjct: 585 TTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA--LCEK 462
G P T+ ++ G G + AL+ V + RG YS L++ L +K
Sbjct: 645 SGVSPNHVTYTVMVKGYVNNGKLDRALETVRA---MVERGYELNDRIYSSLLRGFVLSQK 701
Query: 463 G 463
G
Sbjct: 702 G 702
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 210/485 (43%), Gaps = 66/485 (13%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+ +I++ L K A + K++ G D + L+ G C + D K+ +M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257
Query: 109 SRGV-KPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
G PNSV Y+ LIH LC+ G++ A L M E P+ T+++LI A C +
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A L ++ + G P+V T T +++ LC G++ +A G CR
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEA----------------NGVCR- 360
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+M + G P+V TYN LI+ YC+ G + A ++ M+ N T++ L+ GLC
Sbjct: 361 --KMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
G+ + +L+ M D+ G I YN ++ GL RE + A + L M L P
Sbjct: 419 VGKPYKAVHLLKRMLDN--GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDC 476
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + I FC G + A M+ +G + V LI C + R+A +++
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILET 536
Query: 402 M-------TGH----------------------------GYLPIASTFNTVLSGLCRQGN 426
+ T H G +P T+ T++ GL R G+
Sbjct: 537 LVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ + +++E G LP Y+ +I LC+ G + A LL M G+ P+++T
Sbjct: 597 ISGSFRMLELMKLS---GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 487 WNSLL 491
+ ++
Sbjct: 654 YTVMV 658
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 234/521 (44%), Gaps = 76/521 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL R I + + + + PS+ +N++++ K D + AF
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK-DGRVVPAFE 392
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK---SRGVKPNSVIYNTLIH 124
+M + + T+ LM+GLC RVG +K +H++K G+ P+ V YN LI
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLC---RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC+ G + A L++ M EP+ +TF+ +I A+CK+ A L G
Sbjct: 450 GLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 181 DVVTITKVLELLCSVGRVMDAVEIL-----------------------------EESGEQ 211
D VT T +++ +C+VG+ DA+ IL EE
Sbjct: 510 DEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAML 569
Query: 212 GRL----------------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G++ G + G R L+ M+ GCLPNV Y I+I+ C+
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G ++ A + + M+ G+S N VTY +++G + G++D L+ ++ M + RI
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI- 688
Query: 310 PYNSVLYGLY------RENQQDEALEYLKQMEKLFPRAVDRSLKILG-FCVDGNVEDAKR 362
Y+S+L G RE + E + +E+L + ++ C +G +++
Sbjct: 689 -YSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNG 747
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+++ G I D ++ +YC +++ + EL+ + G++P +F V+ GL
Sbjct: 748 LVQTILKSGVFLEKAI-DIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLK 806
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
++G+ A +LV E + G + SG P ++ L E G
Sbjct: 807 KEGDTERARELVMELL--TSNGVVEKSG-VLPYVECLMETG 844
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 186/399 (46%), Gaps = 35/399 (8%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEE 161
M++ G + Y T++++LCKNG A M + + + + S+L+ +C+
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL-GFCRGL 244
Query: 162 NLVNALVLLEKSFSFGF-VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
NL +AL + + G P+ V+ + ++ LC VGR+ +A + ++ GE
Sbjct: 245 NLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE---------- 294
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
KGC P+ TY +LI + C+ G++D A ++F++M G N TY LI G
Sbjct: 295 ---------KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDG 345
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
LC G+I++ + + M K+G + YN+++ G ++ + A E L MEK +
Sbjct: 346 LCRDGKIEEANGVCRKM--VKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACK 403
Query: 341 AVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
R+ L G C G A +M++ G P++V Y+ LI C+E + A +L
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKL 463
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIK 457
+ M P TF +++ C+QG A + +R GI + G + LI
Sbjct: 464 LTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG----TTLID 519
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+C G + A +L +V +L + N +L LS+
Sbjct: 520 GVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSK 558
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 159/391 (40%), Gaps = 60/391 (15%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVT----FSILICAYCKEENLVNA 166
G + N Y++L+ SL K A ME V + ++ A CK A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
+ + K GF+ D +T +L C + DA+++ + +G
Sbjct: 215 EMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGT------------- 261
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
C PN +Y+ILI CE G L+ A + + M G + TY LI+ LC G
Sbjct: 262 -----CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
ID + E G K + Y ++ GL
Sbjct: 317 IDKAFNLFD--EMIARGCKPNVHTYTVLIDGL---------------------------- 346
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
C DG +E+A +M+++G P+V+ Y+ LI+ YC++ RV A EL+ M
Sbjct: 347 -----CRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P TFN ++ GLCR G A+ L++ R + G P Y+ LI LC +G
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLK---RMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A LL M + PD LT+ +++ +Q
Sbjct: 459 VAYKLLTSMNSFDLEPDCLTFTAIINAFCKQ 489
>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
Length = 967
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 223/506 (44%), Gaps = 28/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P+ F +I GL + ++ KA +L+ + P++ +N++L+ K+ A
Sbjct: 231 PNVGTFNILINGLC---VEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAA 287
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M+ G++ D TY + + LC +R + LL M+ + PN V YNTLI+
Sbjct: 288 IELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING 347
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-- 179
K GK+G A + ++M + PN VT++ LI +C + AL LL+ + G
Sbjct: 348 FVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLN 407
Query: 180 --PDVVTITKVLELLCSVGRVMDAVE---ILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
+V KV ++ G D ++ G+LG+ + +FL M R G +P
Sbjct: 408 EHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE---KFLCHMSRIGLVP 464
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N TY+ +I+ Y G +A F+DM G +F TY +L++GLC GG + + K L
Sbjct: 465 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 524
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
+ + YN++L + EA+ +M + P + S + G C
Sbjct: 525 NRLHYIPGAVDSVM--YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLC 582
Query: 353 VDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
G A F + G + PN V+Y CL+ + + A +EM G P
Sbjct: 583 RKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDT 642
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
FN ++ R+G + A MR G P Y+ L+ +K L
Sbjct: 643 VAFNAIIDSCSRRGQMMKANDFFST-MR--WWGVCPNLATYNILLHGFSKKQALLRYLSL 699
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQ 497
M+ +GI PD LT++SL++ LS+
Sbjct: 700 YSTMMREGIFPDKLTFHSLILGLSKS 725
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 230/544 (42%), Gaps = 57/544 (10%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRK 70
S+F +IR + MI+ V+ +LV PS+ N IL +VK+ +L + +R+
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFRE 223
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
M G+ + T+ IL+ GLC+ + LL M+ G P V YNTL++ CK G
Sbjct: 224 -MSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKG 282
Query: 131 KVGRA---------------------------------------RSLMSDMEEPNDVTFS 151
+ A + + +M PN+VT++
Sbjct: 283 RYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYN 342
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI + KE + A + + F P+ VT ++ C VG +A+ +L+
Sbjct: 343 TLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAA 402
Query: 212 G-RL---GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
G RL G V + M G + T N+L+SS C G L A M G+
Sbjct: 403 GLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGL 462
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDE 326
N +TYD +I G G I D L +D K G Y S+L GL + E
Sbjct: 463 VPNSITYDCIINGY---GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 519
Query: 327 ALEYLKQMEKLFPRAVDRSLK---ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A ++L ++ + P AVD + + C GN+ +A FD+M++ +P+ Y L+
Sbjct: 520 AKKFLNRLHYI-PGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLL 578
Query: 384 HAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
C++ + A L G G L P + ++ GL + G+ A EE M+
Sbjct: 579 TGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMK--- 635
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL 502
+G+ P + ++ +I + +G A+ M G+ P+ T+N LL S++ L
Sbjct: 636 KGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLR 695
Query: 503 LLLL 506
L L
Sbjct: 696 YLSL 699
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 207/478 (43%), Gaps = 36/478 (7%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
+SR + P+ ++ I++ L + M+ G +TY L+KGLC
Sbjct: 457 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 516
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
+ + K L+ + +SV+YNTL+ CK+G + A +L M + P+ T+S
Sbjct: 517 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 576
Query: 153 LICAYCKEENLVNALVLLEKSFSFG-FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
L+ C++ V A+ L + G P+ V T +++ L G A EE ++
Sbjct: 577 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 636
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G R G++ F M G PN+ TYNIL+ + + L
Sbjct: 637 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 696
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL--QLMEDS--------KEGSK 305
L +++ M +GI + +T+ +LI GL G D G+K+L +ME+S + G
Sbjct: 697 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHEMLENGVI 756
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRC 363
+ + Y +++ G+ R A + +ME L V S + G G EDA
Sbjct: 757 PKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLV 816
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
D M+ +P + + L+H +C++ ++ EA +L M G +N ++ G+C
Sbjct: 817 LDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCA 876
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
G+ A +L EE MR R P Y+ L+ A+ LL + +G++
Sbjct: 877 NGDSAAAFELYEE-MR--HRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 931
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 232/509 (45%), Gaps = 41/509 (8%)
Query: 2 PHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI 61
PH +++ D + R RM D +K D V M L + +
Sbjct: 112 PHFVETLCD-----MLFRVCADNRMFRDALKVFDYV----MEKGLVVEGRSCFXKKCNKV 162
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+L F+R+ + + V + I++ LC VG +L++ M +RGV P YNT
Sbjct: 163 ELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNT 222
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+++ ++ ME + VT++ILI Y E + A
Sbjct: 223 LLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEA----------- 271
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
KV E +C MD R G V+ EM +G +PN
Sbjct: 272 --------EKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTX 323
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T+ LIS C+ G +++A + +M+ G+ N V ++T++ G C G +D+ ++ +M
Sbjct: 324 TFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIM 383
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDG 355
E ++G + + YN + GL + ++ +EA L M EK + P V + I +C +G
Sbjct: 384 E--RKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEG 441
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+ + +R + + G VPN+V Y+ LI AY + E+V++A L EM G LP T+
Sbjct: 442 NLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYT 501
Query: 416 TVLSGLCRQGNVGTALKLVEEDM-RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
+++ G C V ALKL E + +GI RG++ Y+ +I L ++G A L +
Sbjct: 502 SLIHGECIVDKVDEALKLFNEMLVKGI-RGNVKT---YTAIISGLSKEGRADEALKLYDE 557
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLL 503
M+ G++PD + +L+ L + ++ L
Sbjct: 558 MMRMGLIPDDRVFEALVGSLHKPSSHAAL 586
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 209/463 (45%), Gaps = 36/463 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +GV D+ ++ L+ C +V + LL M G ++ ++ SLC+ G+
Sbjct: 172 MTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 231
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
M E PN V ++ I CK + A +LE+ G P+V T T
Sbjct: 232 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 291
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ LC +G A + FLK ++ PNV TY ++I YC
Sbjct: 292 LIDGLCKIGWTERAFRL------------------FLKLIKSSSYKPNVHTYTVMIGGYC 333
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G L A + M G+ N TY TLI G C GG D +++ M+ +EG
Sbjct: 334 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMK--QEGFLPN 391
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
I YN+V+ G ++ + EA + L+ + L + ++ I C G++ A FD
Sbjct: 392 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 451
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+E G P++ Y LI YCQ+ ++ E+ + + G LP T+ ++++G C+ G
Sbjct: 452 RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 511
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
AL++ E R + G S Y LI LC++ + A L M+ K ++P +
Sbjct: 512 RSTLALRVFE---RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEV 568
Query: 486 TWNSLLI--CLSQQTTWLLLLL-----LNEMVSFVMVVHELSA 521
T +L C ++T+ + +L ++ + +VV +LSA
Sbjct: 569 TRVTLTFEYCRREKTSIAVSVLDRLDKRQQVHTVDVVVRKLSA 611
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 226/530 (42%), Gaps = 50/530 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR--- 65
PDE F ++ R + +V + R+ + + N+ V+V+ + R
Sbjct: 179 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFS----LDNATCTVVVRSLCEKGRFKD 234
Query: 66 --AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
F+R+ M+ +G + Y + GLC V F +L M RG+KPN + TLI
Sbjct: 235 VSEFFRR-MLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLI 293
Query: 124 HSLCKNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LCK G RA L S +PN T++++I YC+E L A +LL + G
Sbjct: 294 DGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGL 353
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+ T T ++ C G A E+ + +M+++G LPN+ T
Sbjct: 354 KPNTNTYTTLIGGHCKGGSFDRAFEL-------------------MNKMKQEGFLPNIYT 394
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN +I +C+ G + A V G+ ++ +TY LI C G I L + M
Sbjct: 395 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 454
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILGFCVDGN 356
++ G I Y S++ ++ Q +E+ ++ + M L P + I G+C G
Sbjct: 455 EN--GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGR 512
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
A R F++M++ G + + Y LI C+E R+ EA L + M +P T T
Sbjct: 513 STLALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVT 572
Query: 417 VLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+ CR+ A+ +++ D R +++ L G +AS+ L ++
Sbjct: 573 LTFEYCRREKTSIAVSVLDRLDKR-------QQVHTVDVVVRKLSALGDVDAASLFLKKV 625
Query: 476 VGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKR 525
+ + D+ T+ + + + L ++E S + S KEKR
Sbjct: 626 LDEDYAVDHATYTGFINSCYENNRYALASEMSEKFSKKIS----SFKEKR 671
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 188/428 (43%), Gaps = 34/428 (7%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+PP+ + I GL + R + + + + P++ +++D L K RA
Sbjct: 247 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT-ERA 305
Query: 67 F--YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
F + K + +S + + +TY +++ G C ++ LL M +G+KPN+ Y TLI
Sbjct: 306 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 365
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G RA LM+ M++ PN T++ +I +CK+ + A +L + S G
Sbjct: 366 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 425
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D +T T ++ C G + A+++ + M GC P+++ Y
Sbjct: 426 DKITYTILITEHCKQGHITYALDLFD-------------------RMVENGCCPDIEAYT 466
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LIS+YC+ ++ + F+ + G+ TY ++I G C GR L++ + M
Sbjct: 467 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM--V 524
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ G Y +++ GL +E++ +EA + M ++L P V R +C
Sbjct: 525 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 584
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A D++ + V V D ++ V AS +K++ Y +T+ +
Sbjct: 585 IAVSVLDRLDKRQQVHTV---DVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 641
Query: 419 SGLCRQGN 426
+ C + N
Sbjct: 642 NS-CYENN 648
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 136/337 (40%), Gaps = 48/337 (14%)
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
GE GRL + + EM G V+T N ++ ETG A VF+ M G+
Sbjct: 122 GEAGRLPEAAD---MVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVC 178
Query: 269 -----------------------------WNF------VTYDTLIRGLCSGGRIDDGLKI 293
W + T ++R LC GR D +
Sbjct: 179 PDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 238
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
+ M ++ G+ + Y + + GL + +A L++M L P + I G
Sbjct: 239 FRRMLET--GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296
Query: 352 CVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G E A R F ++I+ PNV Y +I YC+E ++ A L+ M G P
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+T+ T++ G C+ G+ A +L+ + + G LP Y+ +I C+KG Q A
Sbjct: 357 TNTYTTLIGGHCKGGSFDRAFELMNKMKQ---EGFLPNIYTYNAVIDGFCKKGKIQEAYK 413
Query: 471 LLVQMVGKGILPDYLTWNSLLI--CLSQQTTWLLLLL 505
+L +G+ D +T+ L+ C T+ L L
Sbjct: 414 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF 450
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 186/398 (46%), Gaps = 26/398 (6%)
Query: 49 FNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+N +L+VL K D Y M+ +G + YTY L++ LC R + + M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTY-NDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENL 163
++G PN Y+ LI LC+ KV A L+++M +PN VT+ L+ CK L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
A+ L + G PD V +++ G + +A + EE E+G
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 213 -----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
R G+ K+M R+GC+PN+ T+N L+ +C+ G + A +F +M+ G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ V+Y+TL+RG+CS G+ + ++L+ M S G I YN ++ G + D A
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPD--IVSYNILIDGYSKSGALDHA 316
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
++ ++ K L P A S I C G V A F MI G P+ + L+
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
C+ ER+ E+ EL + M +P+ +N ++ LC+
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 147/290 (50%), Gaps = 10/290 (3%)
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+LE + GR V G +M GC+PN TY L+ S C+ + A VF M
Sbjct: 23 LLEVLAKSGRCDHVYGT---YNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G S N +Y LI GLC G ++D+ ++L M D G + + Y S+L GL + +
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDG--GHQPNVVTYGSLLSGLCKMGK 137
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
EA++ +M P V ++ I GF G++ +A R F++M+E+G +P V Y+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
L+ + ++ L K+M G +P TFN +L G C+ G++ A +L E MR +
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLE-MRSL 256
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G P Y+ L++ +C KG A LL +M+ G+ PD +++N L+
Sbjct: 257 --GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 38/254 (14%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+YN L+ ++G D +NDM G N TY L+R LC R ++ + + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNV 357
+ +G P S+ I G C V
Sbjct: 79 --AAQGCS---------------------------------PNVFSYSILIAGLCRGQKV 103
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++A ++MI+ G PNVV Y L+ C+ +++EA +L M G P +N +
Sbjct: 104 DEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVL 163
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G ++G++G A +L EE + +G +P Y+ L+ KG F L M+
Sbjct: 164 IDGFSKKGDMGEAYRLFEEMLE---KGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220
Query: 478 KGILPDYLTWNSLL 491
+G +P+ T+N+LL
Sbjct: 221 QGCVPNIFTFNNLL 234
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 129/282 (45%), Gaps = 22/282 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARA 66
PPD ++ +I G + + + + + + P++ +NS+L ++ + ++
Sbjct: 154 PPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQS 213
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ K M+ G + +T+ L+ G C + + +L M+S G P+ V YNTL+ +
Sbjct: 214 LF-KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGM 272
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C GK A+ L+ +M P+ V+++ILI Y K L +A+ L + G PD
Sbjct: 273 CSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDA 332
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGR-----------LGKVKG-----GCRFLKE 226
+ + +++ LC G+V A + ++ G +G +G C +
Sbjct: 333 FSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQA 392
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
M + C+P + YN+L+ C+ D ++F+++ G S
Sbjct: 393 MVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFS 434
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C E+A+ F M +G PNV Y LI C+ ++V EA+EL+ EM G+ P
Sbjct: 63 CQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNV 122
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T+ ++LSGLC+ G + A+ L R + RG P Y+ LI +KG A L
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFS---RMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+M+ KG +P T+NSLL S++ +
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-ID 62
S+ PPD + T++RG+ ++ + + R + P + +N ++D K +D
Sbjct: 255 SLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALD 314
Query: 63 LA-RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
A + FY ++ SG++ D ++Y+ ++ LC +VG F + M + G P++ +
Sbjct: 315 HAIKLFY--EIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIP 372
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+ LC+ ++ + L M + P +++L+ CK + + + + G
Sbjct: 373 LVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Query: 178 FVPDVVTITKVLELL 192
F PDV +LE L
Sbjct: 433 FSPDVEISKVILETL 447
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 213/446 (47%), Gaps = 31/446 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + G++ TY+IL+ G TN KL K++ N +IY+ +IH+ C++
Sbjct: 312 EEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQS 371
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA L+ +MEE P DV S ++ Y ++ L++ E+ GF P +++
Sbjct: 372 GNMDRAEELVREMEEDGIDAPIDVYHS-MMHGYTVAQDEKKCLIVFERLKECGFRPSIIS 430
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L +G+V A+ + +E G L ++M
Sbjct: 431 YGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 490
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G P+ YN+L+ ++C+ G +D A+ +F MK + + + T+ +I G G +
Sbjct: 491 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMK 550
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
L L LM S G + YN++++GL R++Q + A+ L +M + P ++
Sbjct: 551 RALDTLDLMRRS--GCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTI 608
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G+ G++ A F ++ E G +V IY+ L+ A C+ R++ A + +EM+
Sbjct: 609 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 668
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGF 465
+N ++ G R+G+V A L M+ + +P + H ++ I A C+ G
Sbjct: 669 IPRNTFIYNILIDGWARRGDVWEAADL----MKQMKEDGIPPNIHTFTSYINACCKAGDM 724
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
Q A ++ +M G+ P+ T+ +L+
Sbjct: 725 QRAENVIQEMADVGLKPNVKTFTTLI 750
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 179/422 (42%), Gaps = 27/422 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M G+ Y +M G + + +K G +P+ + Y LI+ K
Sbjct: 382 REMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKI 441
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GKV +A ++ +ME + N+ T+S+LI + + NA + E G PD
Sbjct: 442 GKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 501
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMER 229
++E C +G + A+ I E ++ G +K L M R
Sbjct: 502 NLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRR 561
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
GC P V TYN LI ++ A+ V + M I GI+ N TY ++RG + G I
Sbjct: 562 SGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 621
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
+ +++S G K + Y ++L + + AL ++M +K+ ++
Sbjct: 622 AFEYFTKIKES--GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 679
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G+ G+V +A QM E+G PN+ + I+A C+ ++ A +++EM G
Sbjct: 680 IDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGL 739
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P TF T++ G + ALK EE M+ G P Y L+ +L +
Sbjct: 740 KPNVKTFTTLIKGWAKVSLPDRALKCFEE-MKSAGLK--PDEAAYHCLVTSLLSRATVME 796
Query: 468 AS 469
S
Sbjct: 797 GS 798
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 133/321 (41%), Gaps = 58/321 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--------ED 60
PD +I+ ++ + ++ ++ + + + M PS + F I++ +
Sbjct: 496 PDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDT 555
Query: 61 IDLAR----------------AFYRK-----------KMMASGVQGDDYTYAILMKGLCL 93
+DL R RK KM +G+ +++TY I+M+G
Sbjct: 556 LDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAA 615
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
+ +G F+ +K G+K + IY TL+ + CK+G++ A ++ +M N
Sbjct: 616 SGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFI 675
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ILI + + ++ A L+++ G P++ T T + C G + A +++
Sbjct: 676 YNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQ--- 732
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
EM G PNV T+ LI + + + D AL F +MK G+
Sbjct: 733 ----------------EMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKP 776
Query: 270 NFVTYDTLIRGLCSGGRIDDG 290
+ Y L+ L S + +G
Sbjct: 777 DEAAYHCLVTSLLSRATVMEG 797
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 150/358 (41%), Gaps = 63/358 (17%)
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
S + +P+ F +++ Y K + +A E + G P+ T ++ +V
Sbjct: 243 SAFERIPKPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAY-AVA 301
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R M +G ++EM+ +G V TY+ILI+ Y +T +SA
Sbjct: 302 RDM------------------RGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESAD 343
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+F + K + N + Y +I C G +D ++++ ME+ +G I Y+S+++
Sbjct: 344 KLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEE--DGIDAPIDVYHSMMH 401
Query: 317 GLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC---FDQMIEEGGV 373
G+ V +D K+C F+++ E G
Sbjct: 402 ---------------------------------GYTV---AQDEKKCLIVFERLKECGFR 425
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+++ Y CLI+ Y + +V +A + KEM HG T++ +++G + A +
Sbjct: 426 PSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSI 485
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
EDM I G P Y+ L++A C+ G A + +M + + P T+ ++
Sbjct: 486 F-EDM--IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPII 540
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 211/447 (47%), Gaps = 33/447 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M A G++ TY+IL+ G N L K+ N +IY+ +IH+ C++
Sbjct: 336 EEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHCQS 395
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA L+ +MEE P D S ++ Y ++ L++ E+ F P +++
Sbjct: 396 GNMDRAEELVHEMEEDGIDAPIDAYHS-MMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 454
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L +G+V A+ I +E G L R +EM
Sbjct: 455 YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEML 514
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G P+ YN+LI ++C+ G +D A+ + M+ + + + + +I G G +
Sbjct: 515 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 574
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
L IL LM S G + YN++++GL R+NQ + A+ L +M + P ++
Sbjct: 575 RALDILDLMRRS--GCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTI 632
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+ G++ A F + I+EGG+ +V IY+ L+ A C+ R++ A + +EM+
Sbjct: 633 IMRGYAATGDIAKAFEYFTK-IKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQ 691
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGG 464
+N ++ G R+G+V A L M+ + +P + H Y+ I A C+ G
Sbjct: 692 KIARNTFVYNILIDGWARRGDVWEAADL----MKQMKEDGVPPNIHTYTSYINACCKAGD 747
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A ++ +M G+ P+ T+ +L+
Sbjct: 748 MQRAQTVIDEMSDVGLKPNLKTYTTLI 774
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 202/467 (43%), Gaps = 50/467 (10%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
TPS+ + ++++ VK K+M +SG++ ++ TY++L+ G + + F
Sbjct: 448 FTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAF 507
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAY 157
++ M G++P+ IYN LI + CK G + RA ++ M+ +P++ F +I +
Sbjct: 508 RIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGF 567
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
++ AL +L+ G P V+T ++ L +V AV +
Sbjct: 568 AVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSV------------- 614
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
L +M G PN TY I++ Y TG + A + F +K G+ + Y+TL
Sbjct: 615 ------LNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETL 668
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK- 336
+R C GR+ L + + M K + YN ++ G R EA + +KQM++
Sbjct: 669 LRACCKSGRMQSALAVTREMSSQKIARNTFV--YNILIDGWARRGDVWEAADLMKQMKED 726
Query: 337 -LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P + I C G+++ A+ D+M + G PN+ Y LI + + A
Sbjct: 727 GVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRA 786
Query: 396 SELMKEMTGHGYLPIASTFN----------TVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+ +EM G P + ++ TV+ G G + ++ E D+ R +
Sbjct: 787 LKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEGSTYTGILSVCREMFENDLTVDMRTA 846
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ H+S + + GG L + + + PD WNS +
Sbjct: 847 V----HWSRWLHKIEMTGG------ALTEALQRIFPPD---WNSFEV 880
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 167/389 (42%), Gaps = 26/389 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G+ Y +M G + + +K P+ + Y LI+ K G
Sbjct: 407 EMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIG 466
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV +A ++ +ME + N+ T+S+LI + + NA + E+ G PD
Sbjct: 467 KVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYN 526
Query: 187 KVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERK 230
++E C +G + A+ ILE+ ++ G +K L M R
Sbjct: 527 LLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRS 586
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC P V TYN LI ++ A+ V N M I GI+ N TY ++RG + G I
Sbjct: 587 GCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDI--- 643
Query: 291 LKILQLMEDSKEGS-KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
K + KEG K + Y ++L + + AL ++M +K+ ++
Sbjct: 644 AKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNIL 703
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G+ G+V +A QM E+G PN+ Y I+A C+ ++ A ++ EM+ G
Sbjct: 704 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGL 763
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P T+ T++ G R ALK EE
Sbjct: 764 KPNLKTYTTLIKGWARASLPDRALKCFEE 792
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 120/310 (38%), Gaps = 55/310 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD +I+ +I + ++ ++ + + + M PS + F I++
Sbjct: 520 PDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE-------------- 565
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
G + + +L +M+ G P + YN LIH L +
Sbjct: 566 ---------------------GFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIR 604
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+V RA S+++ M PN+ T++I++ Y ++ A K G DV
Sbjct: 605 KNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYI 664
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEME 228
+L C GR+ A+ + E Q R G V +K+M+
Sbjct: 665 YETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMK 724
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PN+ TY I++ C+ G + A V ++M G+ N TY TLI+G D
Sbjct: 725 EDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPD 784
Query: 289 DGLKILQLME 298
LK + M+
Sbjct: 785 RALKCFEEMK 794
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 161/392 (41%), Gaps = 61/392 (15%)
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
S + +P+ F ++I Y K + +A E + G P+ T ++ +V
Sbjct: 267 SAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAY-AVA 325
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R M +G +EM+ +G + TY+ILIS + + SA
Sbjct: 326 RDM------------------RGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSAD 367
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F + K + N + Y +I C G +D +++ ME+ +G I Y+S+++
Sbjct: 368 NLFKEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEE--DGIDAPIDAYHSMMH 425
Query: 317 G----------------------------------LY-RENQQDEALEYLKQMEKLFPRA 341
G LY + + +A+ K+ME +
Sbjct: 426 GYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKH 485
Query: 342 VDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+++ +L GF + +A R F++M++ G P+ IY+ LI A+C+ + A ++
Sbjct: 486 NNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRIL 545
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
++M P F ++ G G++ AL +++ R G P Y+ LI L
Sbjct: 546 EKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRS---GCAPTVMTYNALIHGL 602
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K + A +L +M GI P+ T+ ++
Sbjct: 603 IRKNQVERAVSVLNKMSIAGITPNEHTYTIIM 634
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 4/151 (2%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D I+ T++R ++ + + T +S + + ++N ++D + A
Sbjct: 661 DVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLM 720
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M GV + +TY + C + ++ M G+KPN Y TLI +
Sbjct: 721 KQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARA 780
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICA 156
RA +M+ +P++ + L+ +
Sbjct: 781 SLPDRALKCFEEMKLAGLKPDEAAYHCLVTS 811
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 234/525 (44%), Gaps = 49/525 (9%)
Query: 26 MINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
M+ + + D + ++ PSL+ NS+L LVK + +M + D +T A
Sbjct: 11 MVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCA 70
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP 145
I++ C +V + + M+ G + N+V YN+L+ G + A+ ++ M E
Sbjct: 71 IMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEK 130
Query: 146 ----NDVTFSILICAYCKEENLVNA-LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
N VT ++LI YCK+ + A VL E G V D +++ C VG++ D
Sbjct: 131 GVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGD 190
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A+ + +E + G + G+V G R L M + P+ +Y L+
Sbjct: 191 AIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVD 250
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC G+ A +V + M GI VTY+TL++GLC G D L++ LM + G
Sbjct: 251 GYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLM--LQRGV 308
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL-----KILGFCVDGNVED 359
Y ++L GL++ AL + + R +++S+ I G C G ++
Sbjct: 309 TPNEVGYCTLLDGLFKMGDFSRALTL---WDDILARGINKSIYAFNTMINGLCKMGEMDG 365
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
AK F +M E G P+ + Y L YC+ V EA ++ ++M P +N+++
Sbjct: 366 AKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIV 425
Query: 420 GLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
GL + + L+ E D RG+ P Y LI C++G A +M+GK
Sbjct: 426 GLFTSKKISKLIDLLAEMDTRGLS----PNVVTYGALIAGWCDQGRLDKAFSAYFEMIGK 481
Query: 479 GILPDYLTWNSLLICLSQQTTWLLL-------LLLNEMVSFVMVV 516
G P+ ++IC ++ L +LL +MV F +V+
Sbjct: 482 GFAPN------VIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVL 520
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 212/472 (44%), Gaps = 48/472 (10%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G++ TY L+KGLC D +L H+M RGV PN V Y TL+ L K G
Sbjct: 267 QMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMG 326
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
RA +L D+ + F+ +I CK + A ++ G PD +T
Sbjct: 327 DFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYR 386
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERK 230
+ + C VG V +A +I E+ ++ K+ L EM+ +
Sbjct: 387 TLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTR 446
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PNV TY LI+ +C+ G LD A + +M G + N + ++ L GRID+
Sbjct: 447 GLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA 506
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL-----------KQMEKLFP 339
+LQ M D ++ VL E+ Q+ + L ++ P
Sbjct: 507 NMLLQKMVD-----------FDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLP 555
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
V ++ + G C G V DA+R F + P+ Y LIH + V EA L
Sbjct: 556 NNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLR 615
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKA 458
EM G +P +T+N +L+GLC+ G + A +L ++ ++G+ +P Y+ LI
Sbjct: 616 DEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGL----IPNVVTYNILIDG 671
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT-TWLLLLLLNEM 509
C+ G + A L +M+ +GI P +T++SL+ +Q+ + LLNEM
Sbjct: 672 YCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEM 723
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 211/489 (43%), Gaps = 64/489 (13%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
++ A R+ GV D+Y Y L+ G C ++GD ++ M G+K N + N
Sbjct: 152 VEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCN 211
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+LI+ CKNG+V L+ M +P+ ++ L+ YC++ A + ++
Sbjct: 212 SLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRK 271
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER------- 229
G P VVT +L+ LC G DA+ + ++G G C L + +
Sbjct: 272 GIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRA 331
Query: 230 ---------KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+G ++ +N +I+ C+ G +D A + F M+ G + +TY TL G
Sbjct: 332 LTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDG 391
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LF 338
C G +++ KI + ME + I YNS++ GL+ + + ++ L +M+ L
Sbjct: 392 YCKVGNVEEAFKIKEKMEKEEIFPS--IEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLS 449
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V I G+C G ++ A + +MI +G PNV+I ++ + + R+ EA+ L
Sbjct: 450 PNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANML 509
Query: 399 MKEMTGHGY-----------------------------------LPIASTFNTVLSGLCR 423
+++M LP +N ++GLC+
Sbjct: 510 LQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCK 569
Query: 424 QGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G V A + G+ GS P + Y LI G A L +MV KG++P
Sbjct: 570 SGKVNDARRF----FLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP 625
Query: 483 DYLTWNSLL 491
+ T+N+LL
Sbjct: 626 NITTYNALL 634
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 207/449 (46%), Gaps = 57/449 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+E + T++ GL + + + D + + S+ FN++++ L K ++D A+
Sbjct: 310 PNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKET 369
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M G + D TY L G C V + FK+ M+ + P+ +YN+LI L
Sbjct: 370 F-KRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLF 428
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ K+ + L+++M+ PN VT+ LI +C + L A + GF P+V+
Sbjct: 429 TSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVI 488
Query: 184 TITKVLELLCSVGRVMDAVEILE--------------ESGEQGRLGKVKGG--CRFLKEM 227
+K++ L +GR+ +A +L+ E + + K+ L E
Sbjct: 489 ICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDES 548
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
K LPN YNI ++ C++G ++ A F + + + TY TLI G + G +
Sbjct: 549 AIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYV 608
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
++ + M + +G I+ YN++L GL
Sbjct: 609 NEAFNLRDEMVN--KGLVPNITTYNALLNGL----------------------------- 637
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
C G ++ A+R FD++ +G +PNVV Y+ LI YC+ REA +L +M G
Sbjct: 638 ----CKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGI 693
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P T++++++G C+Q +V A+KL+ E
Sbjct: 694 SPSIITYSSLINGFCKQSDVEEAMKLLNE 722
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 209/483 (43%), Gaps = 61/483 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P + T+++GL R D ++ L+ + +TP+ + ++LD L K D +RA
Sbjct: 275 PTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMG-DFSRALT 333
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++A G+ Y + ++ GLC + + M+ G KP+ + Y TL C
Sbjct: 334 LWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYC 393
Query: 128 KNG-----------------------------------KVGRARSLMSDME----EPNDV 148
K G K+ + L+++M+ PN V
Sbjct: 394 KVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVV 453
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE-- 206
T+ LI +C + L A + GF P+V+ +K++ L +GR+ +A +L+
Sbjct: 454 TYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 513
Query: 207 ------------ESGEQGRLGKVKGG--CRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
E + + K+ L E K LPN YNI ++ C++G +
Sbjct: 514 VDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKV 573
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A F + + + TY TLI G + G +++ + M + +G I+ YN
Sbjct: 574 NDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVN--KGLVPNITTYN 631
Query: 313 SVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++L GL + D A + ++ L P V ++ I G+C G+ +A +M++E
Sbjct: 632 ALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKE 691
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G P+++ Y LI+ +C++ V EA +L+ EM +TF+ ++ G + G+V
Sbjct: 692 GISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKM 751
Query: 431 LKL 433
KL
Sbjct: 752 SKL 754
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 172/392 (43%), Gaps = 42/392 (10%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEEN 162
+L V +G+ N+ +H GK GR SL S + L+ K
Sbjct: 2 ILKVYAEKGMVKNA------LHVFDNMGKYGRKPSLRS---------CNSLLSNLVKRGE 46
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+A+++ ++ VPDV T ++ C G+V AVE
Sbjct: 47 SYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVE------------------- 87
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F++EME+ G N +YN L+ Y G ++ A V M G+ N VT LI+G C
Sbjct: 88 FVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYC 147
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA- 341
++++ K+L+ ME ++G Y +++ G + + +A+ +M K+ +
Sbjct: 148 KQCKVEEAEKVLREME-KEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMN 206
Query: 342 --VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
V SL I G+C +G V + +R M + P+ Y L+ YC++ +A +
Sbjct: 207 LFVCNSL-INGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVC 265
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+M G P T+NT+L GLCR G+ AL+L ++ RG P Y L+ L
Sbjct: 266 DQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQ---RGVTPNEVGYCTLLDGL 322
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G F A L ++ +GI +N+++
Sbjct: 323 FKMGDFSRALTLWDDILARGINKSIYAFNTMI 354
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
++ Y I M GLC + +V D + + P++ Y TLIH G V A +L
Sbjct: 556 NNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLR 615
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+M PN T++ L+ CK L A L +K G +P+VVT +++ C
Sbjct: 616 DEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKS 675
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G +A+++ +G+ M ++G P++ TY+ LI+ +C+ ++ A
Sbjct: 676 GSPREALDL------RGK-------------MLKEGISPSIITYSSLINGFCKQSDVEEA 716
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
+ + N+MK + T+ L+ G G + K+ +M
Sbjct: 717 MKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMH 759
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 51/293 (17%)
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR------IDDGLKIL 294
+++ Y E G++ +AL VF++M G + + ++L+ L G + D ++ L
Sbjct: 1 MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FP-RAVDRSLKILGFC 352
++ D + ++ + + + A+E++++MEKL F AV + + G+
Sbjct: 61 DIVPD--------VFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYV 112
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH-GYLPIA 411
G++E AK M E+G + N V LI YC++ +V EA ++++EM G +
Sbjct: 113 SLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDE 172
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIG-----------------RGSL-------- 446
+ ++ G C+ G +G A++ V ++M +G G +
Sbjct: 173 YAYGALIDGYCKVGKMGDAIR-VRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLM 231
Query: 447 --------PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P S Y L+ C G A + QM+ KGI P +T+N+LL
Sbjct: 232 CMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLL 284
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 35/170 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + T+I G A +N+ D + + P++ +N++L+ L K +D AR
Sbjct: 590 PDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRL 649
Query: 68 Y----------------------------------RKKMMASGVQGDDYTYAILMKGLCL 93
+ R KM+ G+ TY+ L+ G C
Sbjct: 650 FDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCK 709
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ V + KLL+ MK+ V ++ L+ ++G V + L + M
Sbjct: 710 QSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMH 759
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 209/451 (46%), Gaps = 34/451 (7%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+TP + FN++++ L E L A KM+ G+ D TY ++ G+C
Sbjct: 6 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
LL M+ +KP+ VIY+ +I LCK+G A+ L S+M E PN T++ +I +
Sbjct: 66 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
C +A LL PDV+T ++ S ++G+L +
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNA----------------LISASVKEGKLFEA 169
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ C EM + P+ TYN +I +C+ D A +F+ M S + VT++T+
Sbjct: 170 EKLC---DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTI 222
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
I C R+D+G+++L+ E S+ G + YN++++G + + A + ++M
Sbjct: 223 IDVYCRAKRVDEGMQLLR--EISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 280
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P + ++ + GFC + +E+A F+ + + V Y+ +IH C+ +V EA
Sbjct: 281 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 340
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+L + HG P T+N ++SG C + + A L + M+ G P + Y+ L
Sbjct: 341 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK-MK--DNGHEPDNSTYNTL 397
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
I+ + G + L+ +M G D T
Sbjct: 398 IRGCLKAGEIDKSIELISEMRSNGFSGDAFT 428
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 196/411 (47%), Gaps = 37/411 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
T++ G+ + + D A +L+S+ T P + I+++I+D L K+ + +M
Sbjct: 50 TIVNGMCK---MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 106
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G+ + +TY ++ G C R D +LL M R + P+ + +N LI + K GK+
Sbjct: 107 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 166
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L +M P+ VT++ +I +CK +A + F PDVVT +
Sbjct: 167 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTI 222
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+++ C R +V G + L+E+ R+G + N TYN LI +CE
Sbjct: 223 IDVYC-------------------RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 263
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L++A D+F +M G+ + +T + L+ G C ++++ L++ ++++ SK
Sbjct: 264 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD--T 321
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN +++G+ + ++ DEA + + + P ++ I GFC + DA F +
Sbjct: 322 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 381
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
M + G P+ Y+ LI + + ++ EL+ EM +G+ A T V
Sbjct: 382 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 432
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 194/425 (45%), Gaps = 34/425 (8%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
G+ P + +NTLI+ LC G+V A +L++ M + VT+ ++ CK + +A
Sbjct: 5 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 64
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------------- 212
L LL K PDVV + +++ LC G DA + E E+G
Sbjct: 65 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 124
Query: 213 --RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G+ R L++M + P+V T+N LIS+ + G L A + ++M I +
Sbjct: 125 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 184
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
VTY+++I G C R DD + LM + + +N+++ R + DE ++
Sbjct: 185 TVTYNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTFNTIIDVYCRAKRVDEGMQL 238
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L+++ + L + I GFC N+ A+ F +MI G P+ + + L++ +C+
Sbjct: 239 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 298
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLP 447
E++ EA EL + + +N ++ G+C+ V A L + G+ P
Sbjct: 299 NEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVE----P 354
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLL 506
Y+ +I C K A++L +M G PD T+N+L+ CL + L+
Sbjct: 355 DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 414
Query: 507 NEMVS 511
+EM S
Sbjct: 415 SEMRS 419
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDL 63
+ + PD F T+I RA+ +++ ++ +SR + + +N+++ + D ++
Sbjct: 210 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 269
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A+ + ++M++ GV D T IL+ G C ++ + +L V++ + ++V YN +I
Sbjct: 270 AQDLF-QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 328
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H +CK KV A L + EP+ T++++I +C + + +A VL K G
Sbjct: 329 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 388
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
PD T ++ G + ++E++ E G G
Sbjct: 389 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 424
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+E G P V+ ++ LI+ C E RV EA+ L+ +M G G T+ T+++G+C+ G+
Sbjct: 1 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+AL L+ + + P YS +I LC+ G A L +M+ KGI P+ T
Sbjct: 61 TKSALNLLSKMEETHIK---PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 117
Query: 487 WNSLL 491
+N ++
Sbjct: 118 YNCMI 122
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 208/449 (46%), Gaps = 45/449 (10%)
Query: 54 DVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL-MKGLCLTNRVGDGFKLLHVMKSRGV 112
D+ + + I+L R + + S V + AI+ MK + +G ++L G+
Sbjct: 63 DIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVL------GI 116
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALV 168
+ + +N +I+ C +V A S++ M EP+ VT L+ +C+ + +A+
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
L++K G+ PD+V +++ LC RV DA++ F KE+
Sbjct: 177 LVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALD-------------------FFKEIG 217
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
RKG PNV TY L++ C +G + A + DM I+ N +TY L+ G
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNG--- 274
Query: 289 DGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
K+L+ E +E + I P Y+S++ GL ++ DEA + M + FP V
Sbjct: 275 ---KVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVV 331
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I GFC VED + F +M + G V N V Y+ LI + Q V +A E +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P T+N +L GLC G + AL + E+ + + Y+ +I+ +C+
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIV---TYTTVIQGMCKT 448
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + A L + KG+ PD +T+ +++
Sbjct: 449 GKVEDAWGLFCSLSLKGLKPDIVTYTTMM 477
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 224/476 (47%), Gaps = 39/476 (8%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L +VK + D+ + KKM G++ D YT+ I++ C +V
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISL-GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+L M G +P+ V +L++ C+ +V A SL+ M E P+ V ++ +I + C
Sbjct: 142 VLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLC 201
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K + +AL ++ G P+VVT T ++ LC+ GR DA
Sbjct: 202 KTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAA---------------- 245
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
R L++M ++ PNV TY+ L+ ++ + G + A ++F +M I + VTY +LI
Sbjct: 246 ---RLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
GLC RID+ ++ LM +G + YN+++ G + + ++ ++ ++M +
Sbjct: 303 NGLCLHDRIDEANQMFDLM--VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
L V + I GF G+V+ A+ F QM G P++ Y+ L+ C + +A
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKAL 420
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPL 455
+ ++M T+ TV+ G+C+ G V A L ++G+ P Y+ +
Sbjct: 421 VIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLK----PDIVTYTTM 476
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
+ LC KG L +M +G++ N ++CL + L+ +M+S
Sbjct: 477 MSGLCTKGLQHEVEALYTKMKQEGLMK-----NDSMLCLGDGDITISAELIKKMLS 527
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 190/390 (48%), Gaps = 28/390 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD +++ G R ++D V D + P + +N+I+D L K ++ A F
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDF 212
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++ G++ + TY L+ GLC + R D +LL M R + PN + Y+ L+ +
Sbjct: 213 F-KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFV 271
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNGKV A+ + +M +P+ VT+S LI C + + A + + S G PDVV
Sbjct: 272 KNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVV 331
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ C RV D +++ + ++G ++G V F +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G P++ TYNIL+ C+ G+L+ AL +F DM+ + + VTY T+I+G+C G++
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKV 451
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
+D + + S +G K I Y +++ GL + Q E +M++ D S+
Sbjct: 452 EDAWGLFCSL--SLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND-SML 508
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
LG DG++ + +M+ G P+++
Sbjct: 509 CLG---DGDITISAELIKKMLSCGYAPSLL 535
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 7/184 (3%)
Query: 320 RENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN-V 376
R+ + +A+ ++M K FP VD + ++L V D + +E G+ N +
Sbjct: 62 RDIKLHDAINLFREMVKTRPFPSIVDFN-RLLSAIVKMKKYDVVISLGKKMEVLGIRNDL 120
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ +I+ +C +V A ++ +M GY P T ++++G CR+ V A+ LV+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD- 179
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ + G P Y+ +I +LC+ A ++ KGI P+ +T+ +L+ L
Sbjct: 180 --KMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCN 237
Query: 497 QTTW 500
W
Sbjct: 238 SGRW 241
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 223/499 (44%), Gaps = 30/499 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRK-KMMA 74
V+R L A +D+ + + + PS+ +N++LD K +D A A + + A
Sbjct: 200 VLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARA 259
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G +D TY +++ GL + +L+ +M+ K ++ YN LI L V +
Sbjct: 260 AGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLITGLLARDFVEK 318
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A +L+ +ME P VT++ LI K N A V ++ + G +PD++T ++
Sbjct: 319 AGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLIN 378
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
C G + A+ + + G RLG ++G R +EM + CLP
Sbjct: 379 GYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLP 438
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V TY IL++ C L F++M G+ + Y+T I + G I + ++
Sbjct: 439 DVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLR 498
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
+ M G YN ++ GL + +A +M + L V + I C
Sbjct: 499 EEM--MLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHC 556
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G + +AK FD M+ G P+VV Y IH YC+ + A ++M G P
Sbjct: 557 ERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEV 616
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+N ++ LCR G +A + E + RG +P Y+ LI C++G + A L
Sbjct: 617 TYNVLMHALCRMGRTESAYQHFHEMLE---RGLVPNKYTYTLLIDGSCKEGNWVHAIRLY 673
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M KGI PD+ T N+L
Sbjct: 674 CEMHQKGIHPDHCTHNALF 692
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 193/454 (42%), Gaps = 26/454 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P++ + VI GL R + + D++ R + S +N ++ L+ D
Sbjct: 264 PNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAFTYNPLITGLLARDFVEKAGAL 322
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G+ TY L+ GL T M+++G+ P+ + YN+LI+ CK
Sbjct: 323 LLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCK 382
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A L D++ P +T++ILI YC+ +L A L E+ +PDV T
Sbjct: 383 AGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCT 442
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
T ++ C V + +E +G +G + + +EM
Sbjct: 443 YTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMM 502
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G + TYN+LI C+TG L A ++ M DG+ + VTY LI C GR+
Sbjct: 503 LRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLI 562
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ I M S G + Y ++ R A + ++M E + P V ++
Sbjct: 563 EAKNIFDGMVAS--GLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNV 620
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ C G E A + F +M+E G VPN Y LI C+E A L EM G
Sbjct: 621 LMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
P T N + G +G++ A++ +E + G
Sbjct: 681 IHPDHCTHNALFKGF-GEGHMYDAVQYLENVVLG 713
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 206/498 (41%), Gaps = 93/498 (18%)
Query: 37 VSRFNMTPSLKIFNSILDVLV-KEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
++R + P +K N +L VL D RA Y M+ GV+ +TY L+ C
Sbjct: 185 MARHGVAPFVKECNCVLRVLRDAARWDDMRAVY-SDMLQLGVEPSIFTYNTLLDSFCKAG 243
Query: 96 RVGDGFKLLHVMKSR--GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM---EEPNDVTF 150
R+ LL M++R G PN V YN +I+ L + G++ +A L+ M ++ + T+
Sbjct: 244 RMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTY 303
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ LI + + A LL + + G VP VVT +++ L G A
Sbjct: 304 NPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAA--------- 354
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
+VK EM KG LP++ TYN LI+ YC+ G L AL +F D+K G+
Sbjct: 355 -----QVK-----FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPT 404
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
+TY+ LI G C G ++ ++ + M +
Sbjct: 405 VLTYNILIDGYCRLGDLEGARRLKEEMTE------------------------------- 433
Query: 331 LKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
E P ++ + G C+ N+ + FD+M+ +G P+ Y+ I A
Sbjct: 434 ----EDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIG 489
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA----LKLVEEDMR------- 439
+ A +L +EM G T+N ++ GLC+ G++ A +K+V + +R
Sbjct: 490 AITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYT 549
Query: 440 ---------------------GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ G P Y+ I C +G A +M+ +
Sbjct: 550 CLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEE 609
Query: 479 GILPDYLTWNSLLICLSQ 496
G+ P+ +T+N L+ L +
Sbjct: 610 GVEPNEVTYNVLMHALCR 627
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 134/292 (45%), Gaps = 9/292 (3%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM R G P V N ++ + D V++DM G+ + TY+TL+ C
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
GR+D + +L+ ME G YN V+ GL R+ + ++A + + M +L +A
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASA 300
Query: 344 RSLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ I G VE A +M EG VP VV Y+ LI + A E
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M G LP T+N++++G C+ GN+ AL L D++ G G P Y+ LI C
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLF-GDLKRAGLG--PTVLTYNILIDGYCR 417
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEMVS 511
G + A L +M + LPD T+ L+ C+ + ++ + +EM+S
Sbjct: 418 LGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLA-MVRIFFDEMLS 468
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 210/444 (47%), Gaps = 74/444 (16%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARA 66
D+ + T+I G+ + I + A L+ R + P++ ++N+I+D L K +
Sbjct: 167 DQVSYGTLINGVCK---IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+M G+ + TY+ ++ G C+ ++ + L+ M + + P+ IYNTL+ +L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K GKV A+++++ + + PN +T++ LI Y K ++ NA+ L+ G PDV
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--HVFNAVGLM------GVTPDV 335
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ ++ LC + RV +A+ + KEM +K +PN TYN L
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLY-------------------KEMHQKNMVPNTVTYNSL 376
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I C++G + A D+ ++M G N +TY++LI GLC G++D + ++ M+D +
Sbjct: 377 IDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKD--Q 434
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G + + N +L+GL C +++A+
Sbjct: 435 GIQPDMYTLNILLHGL--------------------------------LCKGKRLKNAQG 462
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F ++++G PNV Y+ +I+ +C+E + EA L +M G P A TF ++ L
Sbjct: 463 LFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALL 522
Query: 423 RQGNVGTALKLVEEDMRGIGRGSL 446
+G A KL+ E I RG L
Sbjct: 523 EKGETDKAEKLLCE---MIARGLL 543
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 200/445 (44%), Gaps = 55/445 (12%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
V D H M P + +N ++ S K SL +E +P+ T +I
Sbjct: 44 VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI +C + A +L K +G+ PD VT+T +++ LC G+V A+ ++ QG
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
++G+ + + L+ ++ + PNV YN +I C+ ++ A
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F++M + GIS N VTY +I G C G++ + L L E + + YN+++
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLN--EMVLKAINPDVYIYNTLVD 281
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGF----------------------- 351
L++E + EA L + K L P + + I G+
Sbjct: 282 ALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIM 341
Query: 352 ----CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
C VE+A + +M ++ VPN V Y+ LI C+ R+ A +L+ EM G+
Sbjct: 342 INRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGH 401
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA-LCEKGGFQ 466
T+N++++GLC+ G + A+ L+ + M+ +G P + L+ LC+ +
Sbjct: 402 HANVITYNSLINGLCKNGQLDKAIALINK-MK--DQGIQPDMYTLNILLHGLLCKGKRLK 458
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
+A L ++ KG P+ T+N ++
Sbjct: 459 NAQGLFQDLLDKGYHPNVYTYNIII 483
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 59/264 (22%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I L + + + + + + + NM P+ +NS++D
Sbjct: 333 PDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLID-------------- 378
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
GLC + R+ + L+ M RG N + YN+LI+ LCK
Sbjct: 379 ---------------------GLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCK 417
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICA-YCKEENLVNALVLLEKSFSFGFVPDVV 183
NG++ +A +L++ M+ +P+ T +IL+ CK + L NA L + G+ P+V
Sbjct: 418 NGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVY 477
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C G ++D L+ +ME GC PN T+ I+I
Sbjct: 478 TYNIIIYGHCKEG-LLDEAYALQS------------------KMEDSGCSPNAITFKIII 518
Query: 244 SSYCETGVLDSALDVFNDMKIDGI 267
+ E G D A + +M G+
Sbjct: 519 CALLEKGETDKAEKLLCEMIARGL 542
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 43/278 (15%)
Query: 224 LKEMERKGCL---PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
L + R C+ P + +N ++ S+ + + + + +++ I +F T + LI
Sbjct: 48 LFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINC 107
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
C G+I+ +L + L++ Q P
Sbjct: 108 FCHLGQINLAFSVL------------------------------SKILKWGYQ-----PD 132
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V + I G C+ G V+ A D+++ +G + V Y LI+ C+ R A +L++
Sbjct: 133 TVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLR 192
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKAL 459
+ G P +NT++ LC++ V A L E ++GI + YS +I
Sbjct: 193 RIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT----YSAIIHGF 248
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
C G A L +MV K I PD +N+L+ L ++
Sbjct: 249 CIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKE 286
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 246/565 (43%), Gaps = 101/565 (17%)
Query: 15 ITVIRGLGRARMINDVVKATD---LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
IT + L M ND+ A D +V R P++ F++++D KE +L +AF
Sbjct: 273 ITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEG-NLDKAFVLFD 331
Query: 72 MMA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+MA +GV D Y+IL+ GL R+ DG +LL V +G+K + V +++ + + K G
Sbjct: 332 VMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIG 391
Query: 131 KVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+GR + ++++ PN V+ SILI +C+ ++ A L + GF P ++T +
Sbjct: 392 DLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYS 451
Query: 187 KVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERK 230
++ C G + D + E+ ++ + G V RF + +
Sbjct: 452 ALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNR 511
Query: 231 GCLPNVDTYNILISSYC-----------------------------------ETGVLDSA 255
G PNV T N L+ S+C + G +D A
Sbjct: 512 GLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEA 571
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-----------------E 298
L +F M + +TY TLI GLC + GL I M
Sbjct: 572 LMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINM 631
Query: 299 DSKEG----------------SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
S+EG K + +N+++ + D+A++ +M E+L P
Sbjct: 632 HSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPN 691
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS-ELM 399
A+ ++ I FC +G ++DA F +M+EEG PN+V Y CLIH Y + + + E+ +L
Sbjct: 692 AITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLY 751
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKA 458
EM + P +++ ++ GLC++G +K R + + LP Y+ LI+
Sbjct: 752 NEMLENNIAPNIVSYSILIDGLCKRG----LMKEASCAFRCALDKHLLPDVIAYTILIRG 807
Query: 459 LCEKGGFQSASMLLVQMVGKGILPD 483
C+ G A ML M+ + PD
Sbjct: 808 YCKVGRLTEAMMLYDNMLLNRLTPD 832
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 204/485 (42%), Gaps = 70/485 (14%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K ++ G D T ++KG+ + N +G +++ G KPN V ++TLI + C
Sbjct: 259 FHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYC 318
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILI----------------------------- 154
K G + +A L M P+ + +SILI
Sbjct: 319 KEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVV 378
Query: 155 ------CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA----VEI 204
AY K +L + + ++ + G P+VV+ + +++ C GR+++A V+I
Sbjct: 379 GFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQI 438
Query: 205 LEESGEQGRL------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
L+ E L G ++ G ++M +K C P+ Y++LI+ C+ G++
Sbjct: 439 LKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLV 498
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
AL F G+S N T +TL+ C I +K+ LM K Y
Sbjct: 499 GDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLM--GMLNIKADTVTYT 556
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ G + + DEAL QM K P + I G C FD M +
Sbjct: 557 ILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKN 616
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
P++ IY+ LI+ + +E + A L + G P TFNT++ C + A
Sbjct: 617 AVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDA 676
Query: 431 L----KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ K+ E +R P + ++ LI A C +G A ++ +M+ +G P+ +T
Sbjct: 677 VQLFAKMTSEQLR-------PNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVT 729
Query: 487 WNSLL 491
++ L+
Sbjct: 730 YSCLI 734
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 197/452 (43%), Gaps = 69/452 (15%)
Query: 83 TYAILMKGLC---LTNRVGDGFKLLHV-MKSRGVKPNSV--IYNTLIHSLCKNGKVGRAR 136
Y L++ C + ++ D F +HV +K V PN V + +LI S C V +
Sbjct: 169 VYGFLIESYCRKGMFDKSVDIF--MHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYG 226
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
L S M E + ++ + + + L + GF D++T K+L+ G
Sbjct: 227 ELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILK-----G 281
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
M Q +G + + R G PNV T++ LI +YC+ G LD A
Sbjct: 282 IWM-----------QNDIGVADD---YFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAF 327
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+F+ M +G++ + + Y LI GL GR++DG ++L + D +G K + ++S +
Sbjct: 328 VLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALD--KGIKLDVVGFSSAMD 385
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
+ ++ K+M E + P V S+ I GFC +G + +A F Q+++ G P
Sbjct: 386 AYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEP 445
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+++ Y LI +C+ +R+ L ++M P ++ +++GLC+QG VG AL+
Sbjct: 446 SILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFF 505
Query: 435 EEDMRGIGRGSLPG-----------------------------------SGHYSPLIKAL 459
+ + RG P + Y+ LIK
Sbjct: 506 ---FQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGA 562
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ G A ML QM+ K PD +T+ +L+
Sbjct: 563 AQFGRVDEALMLFFQMLKKDFKPDVITYCTLI 594
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 162/372 (43%), Gaps = 31/372 (8%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+PN VTFS LI AYCKE NL A VL + G PD++ + +++ L GR+ D
Sbjct: 304 KPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQR 363
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L + ++G ++G + + K M +G PNV + +ILI +C
Sbjct: 364 LLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFC 423
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G + A +F + G + +TY LI G C G + DG + + M K R
Sbjct: 424 QNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDM------IKKR 477
Query: 308 ISP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
P Y+ ++ GL ++ +AL + Q L P + + FC + A
Sbjct: 478 CEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAM 537
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ + M + V Y LI Q RV EA L +M + P T+ T++ GL
Sbjct: 538 KVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGL 597
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ L + + + P Y+ LI +G ++A L V +V +G
Sbjct: 598 CKLKKSSAGLCIFDFMCKN---AVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPK 654
Query: 482 PDYLTWNSLLIC 493
PD T+N+++ C
Sbjct: 655 PDVFTFNTMICC 666
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 209/502 (41%), Gaps = 73/502 (14%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K MM G D TY+ ++ LC +V F L MKS GV P+ Y LI S CK
Sbjct: 444 KLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKV 503
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +ARS +ME P+ VT++ L+ AY K + + A + + G P+ +T
Sbjct: 504 GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITY 563
Query: 186 TKVLELLCSVGRVMDAVEILEES-GEQGRLGK----------------------VKGGCR 222
+ +++ LC G A E+ + G +G + G C+
Sbjct: 564 SALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCK 623
Query: 223 ---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
L M GC PN Y+ LI +C+ G LD+A +VF M G T
Sbjct: 624 AHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHT 683
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y +LI + R+D +K+L M +S + Y +++ GL R + +AL+ L
Sbjct: 684 YTSLIDAMFKDRRLDLAIKVLSQMLES--SCTPNVVTYTAMIDGLCRIGECQKALKLLSM 741
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
MEK P V + I G G V+ + + F QMI +G PN V Y LI+ C
Sbjct: 742 MEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGL 801
Query: 392 VREASELMKEMT---------------------------------GHGYLPIASTFNTVL 418
+ EA L+ EM HG + IA + ++
Sbjct: 802 LDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLI 861
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ G + AL+L +E M ++ Y+ LI+ALC + A L ++ K
Sbjct: 862 DSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRK 921
Query: 479 GILPDYLTWNSLLICLSQQTTW 500
G++P+ + L+ L + W
Sbjct: 922 GVVPELSAFICLIKGLIKVNKW 943
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 195/470 (41%), Gaps = 83/470 (17%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G ++G +++ +M + G PN ++N+L+HS C A L++ M
Sbjct: 311 TYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRM 370
Query: 143 E----EPNDVTFSILICAYCK-----------------EENLVNALVL------------ 169
P V ++I I + C EE L ++ VL
Sbjct: 371 AGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCL 430
Query: 170 -----LEKSFSF-------GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
+K+F GFVPD T +KV+ LC +V A + +E G
Sbjct: 431 CGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDV 490
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
++G ++ + EME GC P+V TY L+ +Y +T + A D+F+
Sbjct: 491 YTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHR 550
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G + N +TY L+ GLC G ++ M I ++V Y E
Sbjct: 551 MVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM----------IGTSDNVGSDFYFE 600
Query: 322 NQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ +++ P V I G C V DA+ D M G PN +IYD
Sbjct: 601 GEHTDSIA---------PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDA 651
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI +C+ ++ A E+ M+ GYLP T+ +++ + + + A+K++ + +
Sbjct: 652 LIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLES- 710
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I LC G Q A LL M +G P+ +T+ SL+
Sbjct: 711 --SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLI 758
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 197/432 (45%), Gaps = 51/432 (11%)
Query: 30 VVKATDLVSRF---NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDY--- 82
V +A+D+ R P+ +++++D L K + A Y K + S G D+
Sbjct: 541 VPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFE 600
Query: 83 ------------TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
TY L+ GLC ++V D +LL VM S G +PN +IY+ LI CK G
Sbjct: 601 GEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVG 660
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+ A+ + M + P T++ LI A K+ L A+ +L + P+VVT T
Sbjct: 661 KLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYT 720
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ LC R+G+ + + L ME++GC PNV TY LI
Sbjct: 721 AMIDGLC-------------------RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGL 761
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
++G +D +L +F M G + N+VTY LI C+ G +D+ +L M+ +
Sbjct: 762 GKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPK-- 819
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ Y SV+ G ++ +L L+++E + A L I F G +E A
Sbjct: 820 YVQGYCSVVQGFSKKFIA--SLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELH 877
Query: 365 DQMIEEGGVPNVV---IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M+E N+ Y LI A C ++ +A EL E+T G +P S F ++ GL
Sbjct: 878 KEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGL 937
Query: 422 CRQGNVGTALKL 433
+ AL+L
Sbjct: 938 IKVNKWNEALQL 949
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 137/603 (22%), Positives = 232/603 (38%), Gaps = 127/603 (21%)
Query: 3 HSIQSPPDESIFIT-VIRG------------LGRAR-MINDVV--------KATDLVSRF 40
H+ PP E++ I+ IR L R R +ND V + +L RF
Sbjct: 64 HAAALPPPEAVLISKAIRAYASDFDGKAERFLRRHRDFLNDAVVVAVLRSVRTPELCVRF 123
Query: 41 NMTPSLKI--------FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA----ILM 88
+ ++ +N++ +VL +D RA ++++ + D +++
Sbjct: 124 FLWAERQVGYSHTGACYNALAEVLHFDD----RARTTERLLREIGEDDREVLGRLLNVIV 179
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
+ C + L +K G +P+ YN L+ L G++ + +M E
Sbjct: 180 RKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFC 239
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+ T A CKE +ALV++E+ F D V T+++ L +A+
Sbjct: 240 TDKFTVGCFAQALCKEGRWSDALVMIERE---DFKLDTVLCTQMISGLMEASLFDEAISF 296
Query: 205 LEE--------------SGEQGRLGKVK-GGC-RFLKEMERKGCLPNVDTYNILISSYCE 248
L + G L K + G C R + M +GC PN +N L+ SYC
Sbjct: 297 LHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCN 356
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG------------------------ 284
A + N M G +V Y+ I +CSG
Sbjct: 357 ARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSC 416
Query: 285 -----------------GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
G+ D +I++LM ++G S Y+ V+ L + ++A
Sbjct: 417 VLNKVNTANFARCLCGMGKFDKAFQIIKLM--MRKGFVPDTSTYSKVITFLCEAMKVEKA 474
Query: 328 LEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
++M+ + P ++ I FC G +E A+ FD+M G P+VV Y L+HA
Sbjct: 475 FLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHA 534
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG-----------------NVG 428
Y + ++V +AS++ M G P T++ ++ GLC+ G NVG
Sbjct: 535 YLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVG 594
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+ E I P Y LI LC+ A LL M G P+++ ++
Sbjct: 595 SDFYFEGEHTDSIA----PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYD 650
Query: 489 SLL 491
+L+
Sbjct: 651 ALI 653
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 23/313 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ I+ +I G + +++ + +S+ P++ + S++D + K+ +DLA
Sbjct: 644 PNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKV 703
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ S + TY ++ GLC KLL +M+ RG PN V Y +LI L
Sbjct: 704 L-SQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLG 762
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEK----------- 172
K+GKV + L + M PN VT+ +LI C L A LL +
Sbjct: 763 KSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQ 822
Query: 173 ---SFSFGFVPDVVTITKVLELLCSVGRVMDAVE---ILEESGEQGRLGKVKGGCRFLKE 226
S GF + +LE L S G V A +++ + GRL K + + E
Sbjct: 823 GYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMME 882
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
+ + + DTY LI + C L+ A ++++++ G+ + LI+GL +
Sbjct: 883 VSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNK 942
Query: 287 IDDGLKILQLMED 299
++ L++ M D
Sbjct: 943 WNEALQLCYSMCD 955
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 137/339 (40%), Gaps = 31/339 (9%)
Query: 197 RVMDAVEILEESGEQGR--LGK-----VKGGCR---FLKEMERKGCL------PNVDTYN 240
R +L E GE R LG+ V+ CR + K +E G L P+ TYN
Sbjct: 152 RARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYN 211
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ G +D V +M G + T + LC GR D L +++
Sbjct: 212 ALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIE----- 266
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVE 358
+E K ++ GL + DEA+ +L +M P V + GF +
Sbjct: 267 REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLG 326
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
KR M+ EG PN +++ L+H+YC A +L+ M G G P +N +
Sbjct: 327 WCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFI 386
Query: 419 SGLCRQGNVGTA--LKLVE---EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+C + + L L E E+M + + + + + LC G F A ++
Sbjct: 387 GSICSGEELPSPDLLALAEKVYEEM--LASSCVLNKVNTANFARCLCGMGKFDKAFQIIK 444
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
M+ KG +PD T++ ++ L + LL EM S
Sbjct: 445 LMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 483
>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
Length = 500
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 198/429 (46%), Gaps = 36/429 (8%)
Query: 72 MMASGVQG-DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
M+ SG + + +A L+ L +NR+GD + L +M G+ P+ V + LI CKN
Sbjct: 1 MLHSGTPPPNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNR 60
Query: 131 KVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLL-EKSFSFGFVPDVVT 184
V RA + +M +P+ + +LI YCKE + AL LL E PDVV
Sbjct: 61 MVERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVI 120
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC R ++A + L+E+ M R+GC P V TY LI
Sbjct: 121 YNSIVDGLCRSNRFLEAWKFLDET------------------MVRQGCSPTVVTYTSLIR 162
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C+ + A+ ++N M I V+Y +I GL GR+ D ++++ ME G
Sbjct: 163 GACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREME--TLGC 220
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ + Y +++ GL + D+A + M++ FP + I FC + E A
Sbjct: 221 ELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALG 280
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD I + +V +Y ++ C+E R+ +A L +EM G +N +L G
Sbjct: 281 LFDH-IRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAF 339
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R G A +++EE G G + Y+ +I C +S +L +M +GI P
Sbjct: 340 RSGRSEEAFRILEE--LGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAP 393
Query: 483 DYLTWNSLL 491
D+ T+++L+
Sbjct: 394 DFATYSALI 402
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 221/499 (44%), Gaps = 40/499 (8%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M HS PP++ F ++I L ++ + D +A +L+ + P + F +++ K
Sbjct: 1 MLHSGTPPPNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNR 60
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK-SRGVKPNSVI 118
++ A +++ + ++ Q D + Y +L+ G C R+ +LL M+ R ++P+ VI
Sbjct: 61 MVERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVI 120
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKS 173
YN+++ LC++ + A + + P VT++ LI CK + + A+ +
Sbjct: 121 YNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAM 180
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
P +V+ + +++ L GRV DA R ++EME GC
Sbjct: 181 LERKIQPTIVSYSVIIDGLSKAGRVYDAY-------------------RVVREMETLGCE 221
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
NV Y LI C++G LD A ++ MK G N TY TLI C R + L +
Sbjct: 222 LNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGL 281
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GF 351
+ D ++ Y +V+ GL RE + D+A ++M A + +L G
Sbjct: 282 FDHIRDY---CPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGA 338
Query: 352 CVDGNVEDAKRCFDQMIEEGG-VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
G E+A R +++ ++ G V N++ Y+ +I C E L EM G P
Sbjct: 339 FRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLE----SGMVLFYEMRQRGIAPD 394
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC-EKGGFQSAS 469
+T++ ++ L G + A L EE + G P SG ++ LC + G +A
Sbjct: 395 FATYSALIDRLLGSGEIRRAFDLCEE---MLASGLSPPSGVLGRVVARLCWSRRGDLAAK 451
Query: 470 MLLVQMVGKGILPDYLTWN 488
++ + M L W+
Sbjct: 452 LIEMAMAVDDTASFSLPWD 470
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 209/482 (43%), Gaps = 67/482 (13%)
Query: 71 KMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MMA G + Y ++ G V L M RG+ P+ V YN+++H+LC
Sbjct: 219 RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 278
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + +A + + M PN+ T++ LI Y A+ + ++ +PDVV
Sbjct: 279 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 338
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL---------- 233
T++ ++ LC G++ +A ++ + +G+ V L KGCL
Sbjct: 339 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 398
Query: 234 ------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
P+ T+N+LI +Y G+LD A+ +FN+M+ G+ + VTY T+I LC G++
Sbjct: 399 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 458
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----------- 336
DD ++ M D +G YN ++ G +A E + ++
Sbjct: 459 DDAMEKFNQMID--QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 516
Query: 337 --------------------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
L P AV S+ + G+C+ G +E A R FD M+
Sbjct: 517 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 576
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG-NVGT 429
G PNVV+Y L++ YC+ R+ E L +EM G P ++ ++ GL + G V
Sbjct: 577 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 636
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
+K E GI Y+ +++ L + F A L ++ + + +T N+
Sbjct: 637 KMKFHEMTESGIAMDICT----YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692
Query: 490 LL 491
++
Sbjct: 693 MI 694
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 216/477 (45%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ + L++G C R +
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 178
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ Y+ L+ SLC GK G+A L+ M E PN V ++ +
Sbjct: 179 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 238
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
I + KE ++ A L ++ G PD+VT V+ LC R MD E R
Sbjct: 239 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAMDKAEAFLRQMVNKR 297
Query: 214 L-----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ G+ K R KEM R LP+V T ++L+ S C+ G + A
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 357
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + + +Y+ ++ G + G + D + LM +G +N ++
Sbjct: 358 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM--LGDGIAPDFYTFNVLIK 415
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D+A+ +M + P V I C G ++DA F+QMI++G P
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 475
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ Y+CLI +C + +A EL+ E+ +G F+++++ LC+ G V A +
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + G P + YS L+ C G + A + MV GI P+ + + +L+
Sbjct: 536 D---LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 181/395 (45%), Gaps = 37/395 (9%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D YT+ +L+K + + + M+ GVKP+ V Y T+I +LC+ GK
Sbjct: 398 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 457
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + M + P+ ++ LI +C +L+ A L+ + + G D+V +
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 517
Query: 188 VLELLCSVGRVMDAVEILEESGEQGR----------------LGKVKGGCRFLKEMERKG 231
++ LC +GRVMDA I + + G +GK++ R M G
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PNV Y L++ YC+ G +D L +F +M GI + + Y +I GL GR
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI--L 349
++ E ++ G I YN VL GL++ DEA+ K++ RA++ + I L
Sbjct: 638 --MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL-----RAMNVKINIITL 690
Query: 350 GFCVDG-----NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+DG VE+AK F + VPNVV Y +I +E V EA ++ M
Sbjct: 691 NTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750
Query: 405 HGYLPIASTFNTVLSGLCRQGNV---GTALKLVEE 436
G P + N V+ L ++ + G L ++E
Sbjct: 751 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 785
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 194/464 (41%), Gaps = 73/464 (15%)
Query: 63 LARAFYRKKMMASGVQGD------DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
LA A + + AS QG +TYAILM +R + G++ N
Sbjct: 102 LAVALFNRA--ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 159
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I N L+ C+ + A +LL ++
Sbjct: 160 IIANHLLEGFCEAKRTDEALD------------------------------ILLHRTPEL 189
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV + + +L+ LC G+ A ++L E G + C PNV
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-----------------CSPNV 232
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN +I + + G ++ A D+F +M GI + VTY++++ LC +D L+
Sbjct: 233 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 292
Query: 297 MEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
M + R+ P YN+++YG Q EA+ K+M + + P V S+ +
Sbjct: 293 MVNK------RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 346
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G +++A+ FD M +G P+V Y+ +++ Y + + + ++L M G G P
Sbjct: 347 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 406
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
TFN ++ G + A+ + E MR G P Y +I ALC G A
Sbjct: 407 FYTFNVLIKAYANCGMLDKAMIIFNE-MR--DHGVKPDVVTYRTVIAALCRIGKMDDAME 463
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVM 514
QM+ +G+ PD +N L+ + LL E++S +M
Sbjct: 464 KFNQMIDQGVAPDKYAYNCLIQGFCTHGS---LLKAKELISEIM 504
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 159/353 (45%), Gaps = 34/353 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +I+ M++ + + + + P + + +++ L + +D A
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ GV D Y Y L++G C + +L+ + + G+ + V ++++I++LC
Sbjct: 465 F-NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 523
Query: 128 KNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G+V A+++ D+ P+ V +S+L+ YC + AL + + S G P+V
Sbjct: 524 KLGRVMDAQNIF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 582
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
V ++ C +GR+ + + + E ++G + G+ E
Sbjct: 583 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHE 642
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G ++ TYNI++ + D A+ +F +++ + N +T +T+I G+ R
Sbjct: 643 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 702
Query: 287 IDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQME 335
+++ + + S+ R+ P Y+ ++ L +E +EA + M+
Sbjct: 703 VEEAKDLFASI------SRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQ 749
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDLA 64
D + V+RGL + R ++ + + N+ ++ N+++D + V+E DL
Sbjct: 651 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 710
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ R +++ + V TY+I++ L V + + M++ G +PNS + N ++
Sbjct: 711 ASISRSRLVPNVV-----TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 765
Query: 125 SLCKNGKVGRARSLMSDMEEPN 146
L K ++ RA + +S ++E N
Sbjct: 766 ELLKKNEIVRAGAYLSKIDERN 787
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 148/635 (23%), Positives = 270/635 (42%), Gaps = 90/635 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P S + T+I L + + ++ + S+ +F +++ V +E +D A +
Sbjct: 196 PAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSL 255
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M ++ + D Y + + +V +K H +KS G+ P+ V Y ++I LC
Sbjct: 256 L-DEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLC 314
Query: 128 KNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A + ME+ +V ++ +I Y A LLE+ + G +P V+
Sbjct: 315 KGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVI 374
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRFLKEME 228
+L L GR+ +A+ EE + + G+V+ + M+
Sbjct: 375 AYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMK 434
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PNV T NI+I C+ LD A +F M S + VT+ +LI GL GR+D
Sbjct: 435 EAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVD 494
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
D ++ + M DS + + Y S++ ++ ++++ + K+M R L++
Sbjct: 495 DAYRLYEQMLDSDKIPNAVV--YTSLIKSFFKCGRKEDGHKIFKEM---IHRGCSPDLRL 549
Query: 349 LGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
L +D G + F+++ G +P+V+ Y LIH + RE EL M
Sbjct: 550 LNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMK 609
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-------GSL---------- 446
G + +NT + G C+ G V A +L+EE M+ GR GS+
Sbjct: 610 EQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE-MKTKGRQPTVVTYGSVIDGLAKIDRL 668
Query: 447 ----------PGSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+G YS LI + G A +++ +++ KG+ P+ TWN L
Sbjct: 669 DEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 728
Query: 491 LICL--SQQTTWLLLLLLN--------EMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGS 540
L L +++ L+ N +++ ++++ L C++R N A
Sbjct: 729 LDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGL------CRVRKFNK----AFV 778
Query: 541 VW-----LGLRIHDTTHTFIIDRRVEIGHVFCSSS 570
W GL+ + T+T +I + G++ +SS
Sbjct: 779 FWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASS 813
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 203/458 (44%), Gaps = 27/458 (5%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
+ P+ S + +I L +A + K D + + P++ N ++D L K + +D A
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEAC 462
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ + + M D+ T+ L+ GL RV D ++L M PN+V+Y +LI S
Sbjct: 463 SIF-EGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKS 521
Query: 126 LCKNGKVGRARSLMSDMEEPNDVTFSILICAYC----KEENLVNALVLLEKSFSFGFVPD 181
K G+ + +M L+ AY K L E+ S GF+PD
Sbjct: 522 FFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPD 581
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
V++ + ++ L G + E+ EQG + GKV + L+
Sbjct: 582 VMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLE 641
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM+ KG P V TY +I + LD A +F + K +G+ N V Y +LI G G
Sbjct: 642 EMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVG 701
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVD 343
RID+ I++ E ++G + +N +L L + + +EAL + M+ L P +
Sbjct: 702 RIDEAYLIME--ELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHIT 759
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S+ I G C A + +M ++G PN + Y +I + + EAS L +
Sbjct: 760 YSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFK 819
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED-MRG 440
+G +P ++++N ++ GL A K+ EE M+G
Sbjct: 820 ANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKG 857
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 189/455 (41%), Gaps = 63/455 (13%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL--------------------------- 126
+N++ +GF L+ M+ +P Y TLI +L
Sbjct: 176 SNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHL 235
Query: 127 --------CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF 174
+ G++ A SL+ +M+ + V +++ I + K + A +
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIK 295
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVK 218
S G +PD VT T ++ +LC R+ +AVEI E+ + G GK
Sbjct: 296 SHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFD 355
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
L+ + +GC+P+V YN +++ + G L AL F +MK D N TY+ LI
Sbjct: 356 EAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAP-NLSTYNVLI 414
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LC G ++ K+ M+++ G + N ++ L + + DEA + M
Sbjct: 415 DMLCKAGEVEAAFKVRDAMKEA--GLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKI 472
Query: 339 --PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V I G G V+DA R ++QM++ +PN V+Y LI ++ + R +
Sbjct: 473 CSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGH 532
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
++ KEM G P N + + + G G L EE RG +P YS LI
Sbjct: 533 KIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK---SRGFIPDVMSYSILI 589
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L + G + L M +G + D +N+ +
Sbjct: 590 HGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFI 624
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 164/385 (42%), Gaps = 31/385 (8%)
Query: 119 YNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSF 174
Y++L+ + KN K ++ +M P+ T LI + K L L++
Sbjct: 131 YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMR 190
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
F F P T ++ L SV +ES L +M+ G
Sbjct: 191 KFKFRPAFSAYTTLIGALSSV----------QESDIMLTL---------FHQMQELGYEV 231
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V + +I + G LD+AL + ++MK + + + V Y+ I G++D K
Sbjct: 232 SVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFF 291
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFC 352
E G Y S++ L + N+ DEA+E +QME + P A + I+G+
Sbjct: 292 H--EIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYG 349
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++A ++ G +P+V+ Y+C++ ++ R+ EA +EM P S
Sbjct: 350 SAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLS 408
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+N ++ LC+ G V A K V + M+ G P + +I LC+ A +
Sbjct: 409 TYNVLIDMLCKAGEVEAAFK-VRDAMKEAGL--FPNVMTVNIMIDRLCKAKKLDEACSIF 465
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQ 497
M K PD +T+ SL+ L +Q
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQ 490
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + +VI GL + +++ + + ++ I++S++D K ID A
Sbjct: 650 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAY-L 708
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++M G+ + YT+ L+ L + + MK+ PN + Y+ LI+ LC
Sbjct: 709 IMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLC 768
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ K +A +M++ PN +T++ +I K N+ A L E+ + G VPD
Sbjct: 769 RVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSA 828
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ ++E L R M+A +I EE+ +G K L +++ CL
Sbjct: 829 SYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECL 878
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 175/352 (49%), Gaps = 35/352 (9%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++M G+ D Y +++ G C + D ++ M G P+ V YNTL++ LC
Sbjct: 3 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A L+++M E P+ TF+ LI YC E L AL L + + PD+V
Sbjct: 63 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ +C G + A ++ ++ M + PN TY+ILI
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDD-------------------MHSREIFPNHVTYSILI 163
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S+CE G ++ A ++M GI N +TY+++I+G C G + G K LQ M +K
Sbjct: 164 DSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK-- 221
Query: 304 SKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
+SP YN++++G +E++ +A + L MEK + P V ++ I GF V GNV
Sbjct: 222 ----VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNV 277
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
++A F++M +G P+ Y +I+ + +EA +L EM G+ P
Sbjct: 278 QEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAP 329
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 157/327 (48%), Gaps = 26/327 (7%)
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
+ L + FG VPD V T V+ C G + DA+ + +E GC
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV----------GC----- 45
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
GCLP+V TYN L++ C+ L A + N+M+ G+ + T+ TLI G C G+
Sbjct: 46 ----GCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 101
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
+D L++ M + + + I YN+++ G+ R+ D+A + M ++FP V
Sbjct: 102 LDKALQLFDTMLNQR--LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTY 159
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ I C G VEDA D+MI +G +PN++ Y+ +I YC+ V + + +++M
Sbjct: 160 SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 219
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+ P T+NT++ G ++ + A KL+ + P Y+ LI G
Sbjct: 220 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK---EKVQPDVVTYNMLINGFSVHGN 276
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A + +M KGI PD T+ S++
Sbjct: 277 VQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 25/330 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD I+ VI G RA +++D ++ D + P + +N++L+ L KE L
Sbjct: 14 PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M GV D T+ L+ G C+ ++ +L M ++ ++P+ V YNTLI +C+
Sbjct: 74 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + +A L DM PN VT+SILI ++C++ + +A L++ + G +P+++T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C R G V G +FL++M P++ TYN LI
Sbjct: 194 YNSIIKGYC-------------------RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 234
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y + + A + N M+ + + + VTY+ LI G G + + I + M +G
Sbjct: 235 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM--CAKGI 292
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ Y S++ G EA + +M
Sbjct: 293 EPDRYTYMSMINGHVTAGNSKEAFQLHDEM 322
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
RCF G VP+ VIY +I +C+ + +A + EM G G LP T+NT+L+GL
Sbjct: 8 RCF------GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 61
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C++ + A L+ E MR RG P ++ LI C +G A L M+ + +
Sbjct: 62 CKERRLLDAEGLLNE-MRE--RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 118
Query: 482 PDYLTWNSLLICLSQQ 497
PD +T+N+L+ + +Q
Sbjct: 119 PDIVTYNTLIDGMCRQ 134
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 211/473 (44%), Gaps = 64/473 (13%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK- 102
P++ +N ++D + + + +G++ D IL+K LC R D
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICA 156
LLH M GV+P+++ Y+T++ SLC++ + RA L+ M + PN V+++ +I
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQGR-- 213
+ +E + A L + G VPDVVT + ++ LC R MD E +L + G
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCK-ARAMDKAELVLRQMISNGFEP 295
Query: 214 --------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
LG+ K +EM R+G +P++ T N +SS C+ G A + F
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G + VTY L+ G + G + D L + ME + G S YN ++
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGN--GIVADHSVYNILIDAYG 413
Query: 320 RENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ DEA+ F QM E G +P+ Y
Sbjct: 414 KRGMMDEAM---------------------------------LIFTQMQERGVMPDAWTY 440
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM- 438
+I A+ + R+ +A + +M G P +N+++ G C GN+ A +L+ E M
Sbjct: 441 GTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS 500
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
RGI R P + ++ +I +LC++G A + ++ G PD +T+NSL+
Sbjct: 501 RGIPR---PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI 550
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 186/432 (43%), Gaps = 34/432 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++ G + D++ + + + ++N ++D K +
Sbjct: 365 PDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLI 424
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M GV D +TY ++ R+ D + M + G+KP++++YN+LI C
Sbjct: 425 FTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCM 484
Query: 129 NGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G + +A+ L+S+M PN V F+ +I + CKE +V A + + G PDV+
Sbjct: 485 HGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVI 544
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G +GK++ L M G P+V TY+ L+
Sbjct: 545 TFNSLID-------------------GYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC G +D L +F +M G+ +TY ++ GL + GR K+ M +S G
Sbjct: 586 DGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIES--G 643
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDG-----NVE 358
+ IS +L GL R N DEA+ K KL V ++ I+ +D E
Sbjct: 644 TTMDISTCGIILGGLCRNNCDDEAIALFK---KLGAMNVKFNIAIINTMIDAMYKVRKRE 700
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+A FD + G VPN Y +I +E V EA + M G P + N ++
Sbjct: 701 EANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNII 760
Query: 419 SGLCRQGNVGTA 430
L +G + A
Sbjct: 761 RVLLEKGEISKA 772
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 194/441 (43%), Gaps = 40/441 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLAR 65
P+ + TVI G R +V KA +L + P + ++S +D L K
Sbjct: 225 PNVVSYNTVIHGFFRE---GEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKA 281
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
++M+++G + D TY ++ G + + + + M RG+ P+ N+ + S
Sbjct: 282 ELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSS 341
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+GK A M +P+ VT+S+L+ Y E +V+ L L G V D
Sbjct: 342 LCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVAD 401
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
V +L +DA G+ G + +M+ +G +P+ TY
Sbjct: 402 ----HSVYNIL------IDAY---------GKRGMMDEAMLIFTQMQERGVMPDAWTYGT 442
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I+++ G L A+D FN M G+ + + Y++LI+G C G + +++ M
Sbjct: 443 VIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMM--- 499
Query: 302 EGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
S+G P +NS++ L +E + EA + + + P + + I G+ + G
Sbjct: 500 --SRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVG 557
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+E A D MI G P+VV Y L+ YC+ R+ + L +EM G P T+
Sbjct: 558 KMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYG 617
Query: 416 TVLSGLCRQGNVGTALKLVEE 436
+L GL G A K+ E
Sbjct: 618 IILHGLFNDGRTVGAKKMCHE 638
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 151/356 (42%), Gaps = 27/356 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P T++IL+ C+ L + G DV+ +L+ LC R DAV +
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-- 262
L L M G P+ +Y+ ++ S CE ALD+ + M
Sbjct: 177 L------------------LHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVK 218
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
K G S N V+Y+T+I G G + + M ++G + Y+S + L +
Sbjct: 219 KSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEM--MQQGVVPDVVTYSSYIDALCKAR 276
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D+A L+QM P V + I G+ + G ++ F +M G +P++ +
Sbjct: 277 AMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCN 336
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
+ + C+ + +EA+E M G+ P T++ +L G +G V L L
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSME-- 394
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
G G + Y+ LI A ++G A ++ QM +G++PD T+ +++ S+
Sbjct: 395 -GNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSR 449
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 10/275 (3%)
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
CR +E + LP V TYNIL+ C +F G+ + + + L++
Sbjct: 106 CR--EEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKC 163
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---- 336
LC R DD + +L L + G + Y++VL L +++ AL+ L M K
Sbjct: 164 LCHAKRSDDAVNVL-LHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGG 222
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V + I GF +G V A F +M+++G VP+VV Y I A C+ + +A
Sbjct: 223 CSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAE 282
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
++++M +G+ P T+N ++ G G + E R RG +P + +
Sbjct: 283 LVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR---RGLMPDIFTCNSYM 339
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+LC+ G + A+ M KG PD +T++ LL
Sbjct: 340 SSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLL 374
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 30/314 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDV--LVKEDIDLARA 66
P+ F ++I L + + + DLV P + FNS++D LV + + +A
Sbjct: 506 PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGK---MEKA 562
Query: 67 F-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F M++ G++ D TY+ L+ G C R+ DG L M S+GVKP ++ Y ++H
Sbjct: 563 FGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHG 622
Query: 126 LCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L +G+ A+ + +M E T I++ C+ A+ L +K + +
Sbjct: 623 LFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFN 682
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
+ I +++ + V + +A E+ + G + G V+
Sbjct: 683 IAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFS 742
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGLCS 283
ME+ GC P+ N +I E G + A + + K+DG IS T ++
Sbjct: 743 LMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLS--KVDGKTISLEASTASLMLSLFSR 800
Query: 284 GGRIDDGLKILQLM 297
G+ + +K L M
Sbjct: 801 KGKYREQIKSLPAM 814
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 193/419 (46%), Gaps = 65/419 (15%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL 169
PN +N +I LCK G++ ARSL S M+E P+ VTF+ LI Y K L L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
+E+ G DVVT ++ C GR+ A + M+R
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYG-------------------YFAAMKR 286
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+G + NV T++ + ++C+ G++ A+ +F M++ G++ N TY LI G C GR+DD
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA-------- 341
+ +L M ++G + Y ++ GL +E + EA + L+ MEK RA
Sbjct: 347 AIVLLDEM--VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 342 --------------------------VDRSLK---ILGFCVDGNVEDAKRCFDQMIEEGG 372
+D SL I G C +++AK +M E G
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN +IY ++ A + +V EA +++++ G+ P T+ ++ GLC+ G++ A+
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ MR +G P Y+ L+ LC+ G A L +MV KG+ D + + +LL
Sbjct: 525 HFNK-MRDLGLD--PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 211/472 (44%), Gaps = 29/472 (6%)
Query: 43 TPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
P++ FN ++D L KE ++ AR+ + +M G D T+ L+ G + +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLF-SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L+ M+ G K + V YN LI+ CK G++ A + M+ N VTFS + A+
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
CKE + A+ L + G + T T +++ C GR+ DA+ +L+E QG
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ KV L+ ME+ G N Y LI + + AL + ++
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
MK G+ + Y LI+GLC+ ++D+ +L M++S G + Y +++ ++
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES--GLEPNYIIYTTMMDACFKS 481
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ EA+ L+++ P + I G C G++++A F++M + G PNV Y
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
L+ C+ + EA +L EM G + +L G +QGN+ A L +
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL---KAK 598
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I G Y+ I C A + +M+G GI PD +N L+
Sbjct: 599 MIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 179/408 (43%), Gaps = 55/408 (13%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
F++ +D KE + +M G+ +++TY L+ G C R+ D LL M
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLV 164
+GV N V Y L+ LCK KV A ++ ME+ N++ ++ LI + +N
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------ 212
AL LL + + G D+ +++ LC+V ++ +A +L + E G
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ GKV L+++ G PNV TY LI C+ G +D A+ FN M+ G+
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
N Y L+ GLC G +++ +++ M +G Y ++L G
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEM--VHKGMSLDKVVYTALLDG----------- 582
Query: 329 EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
YLKQ GN+ DA +MI+ G ++ Y C I +C
Sbjct: 583 -YLKQ---------------------GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ EA E+ EM GHG P + +N ++S + GN+ A+ L +E
Sbjct: 621 LNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL + +N+ V+ + + M+ ++ ++LD +K+ +L AF
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQG-NLHDAFA 594
Query: 69 RK-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K KM+ SG+Q D + Y + G C N + + ++ M G+ P+ +YN LI
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQ 654
Query: 128 KNGKVGRARSLMSDME 143
K G + A SL +ME
Sbjct: 655 KLGNLEEAISLQDEME 670
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 195/412 (47%), Gaps = 41/412 (9%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLCKNGKVGRARS 137
D ++Y IL+ GLC NR + +LLH+M G P+ V Y+T+I+ K G + +
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK--- 106
Query: 138 LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
++ PN VT++ +I A CK + + A+ +L G +PD +T ++ CS G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+A+ FLK+M G P+V TYN L+ C+ G A
Sbjct: 167 PKEAI-------------------VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+F+ M G+ + TY TL++G + G + + +L LM + G ++ ++
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM--VRNGIHPNHYVFSILVCA 265
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
++ + +EA+ +M + L P AV I C G VEDA F+QMI+EG P+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
++Y+ LIH+ C ++ +A EL EM G FN+++ C++G V + KL +
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
+R IG P I L G A L V G++P+Y T+
Sbjct: 386 LMVR-IG---------VKPDIITL---GRNDEAKDLFVAFSSNGLVPNYWTY 424
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 171/388 (44%), Gaps = 71/388 (18%)
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENL 163
RG+ P+ YN L++ LC + A L+ M + P+ V++S +I + KE +L
Sbjct: 46 RGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
+L++ S P+VVT ++ LC V A+E+L
Sbjct: 105 DK---MLDQRIS----PNVVTYNSIIAALCKAQTVDKAMEVL------------------ 139
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M + G +P+ TYN ++ +C +G A+ M+ DG+ + VTY++L+ LC
Sbjct: 140 -TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
GR + KI M +K G K I+ Y ++L G
Sbjct: 199 NGRCTEARKIFDSM--TKRGLKPDITTYGTLLQG-------------------------- 230
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ G + + D M+ G PN ++ L+ AY ++E+V EA + +M
Sbjct: 231 -------YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P A T+ TV+ LC+ G V A+ E+ I G P S Y+ LI +LC
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ---MIDEGLRPDSIVYNSLIHSLCIFD 340
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ A L ++M+ +GI + +NS++
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSII 368
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 67/330 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PPD + TVI G + D+ K D ++P++ +NSI+ L K + +D A
Sbjct: 85 PPDVVSYSTVINGFFKE---GDLDKMLDQ----RISPNVVTYNSIIAALCKAQTVDKAME 137
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M+ SGV D TY ++ G C + + + L M+S GV+P+ V YN+L+ L
Sbjct: 138 VL-TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 196
Query: 127 CKNGKVGRARSLMSDMEE---------------------------------------PND 147
CKNG+ AR + M + PN
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
FSIL+CAY K+E + A+++ K G P+ VT V+++LC GRV DA+
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAM----- 311
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+ ++M +G P+ YN LI S C + A ++F +M GI
Sbjct: 312 --------------LYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+ + ++++I C GR+ + K+ LM
Sbjct: 358 CLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + T+++G + ++ DL+ R + P+ +F+ ++ K++
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+ + TY ++ LC + RV D M G++P+S++YN+LIHSLC
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCI 338
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K +A L +M + + + F+ +I ++CKE ++ + L + G PD++T
Sbjct: 339 FDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
LG+ G +PN TY ++
Sbjct: 399 -----------------------------LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 429
Query: 245 SYCETGVLDSALDVFNDMKIDGIS-----WNFVTYDTLIRG 280
+ G+L+ +F M+ +G + NF+ + L RG
Sbjct: 430 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 470
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 15/152 (9%)
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG--YLPIASTFN 415
EDA+ FD+++ G +P+V Y+ L++ C E R +EA EL+ M G P +++
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
TV++G ++G++ K++++ + P Y+ +I ALC+ A +L M
Sbjct: 93 TVINGFFKEGDLD---KMLDQRIS-------PNVVTYNSIIAALCKAQTVDKAMEVLTTM 142
Query: 476 VGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
V G++PD +T+NS++ C S Q ++ L
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL 174
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/564 (24%), Positives = 243/564 (43%), Gaps = 68/564 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKI--FNSILDVLVK-EDIDLA 64
P D T + GL R ++ + +++ R L + +N+++D K +D+ A
Sbjct: 149 PWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAA 208
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A ++M G+ D Y L+ G + +++ MK+ GV+P+ V + TLI
Sbjct: 209 LAVV-ERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIG 267
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK ++ A +L M P+ VT S L+ C++ A L + G P
Sbjct: 268 EYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAP 327
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ VT ++ L V RV +++ +L E +G + GK++ L
Sbjct: 328 NHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVL 387
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ PN TY +L+ ++C G +D A + M+ +S N VT+ +++ GL
Sbjct: 388 RHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKR 447
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---------- 334
G I ++ M+DS G + Y +++ G ++ Q+ AL+ + M
Sbjct: 448 GCIAKAAGYMRKMKDS--GIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNF 505
Query: 335 ------------------EKLFPRAVDRSLKI---------LGFCVDGNVEDAKRCFDQM 367
E LF +R L + G GN+ A + ++
Sbjct: 506 IVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQEL 565
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+E P+ V+Y+ I+ C+ + EA +KEM G P +T+NT++S CR+GN
Sbjct: 566 MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNT 625
Query: 428 GTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
ALKL+ E + S+ P Y+ L+ L E G + A LL +M G P LT
Sbjct: 626 SKALKLLNE----MKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLT 681
Query: 487 WNSLLICLSQQTTWLLLLLLNEMV 510
+ +L S + ++L ++E++
Sbjct: 682 YRRVLQACSGSRSPYVILEVHELM 705
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 229/549 (41%), Gaps = 67/549 (12%)
Query: 41 NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+++P++ F+SIL+ LVK A Y +KM SG+ + TY L+ G
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICA 156
+ M GV+ N+ I ++L++ L KNG + A +L DM E + V ++ L+
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
K N+ AL + ++ PD V + LC RLGK
Sbjct: 549 LFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLC-------------------RLGK 589
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
FLKEM G P+ TYN +IS+ C G AL + N+MK I N +TY T
Sbjct: 590 FSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTT 649
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSK------------EGSKGRISP-------------- 310
L+ GL G ++ +L M + + G SP
Sbjct: 650 LVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAG 709
Query: 311 -------YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YN++++ L +A L +M + P + + ILG C ++++A
Sbjct: 710 LHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAF 769
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ QM+ +G PN+ ++ L+ R+ EA ++ EM G P T++ +++G
Sbjct: 770 ATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGY 829
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
++ N AL+L E + +G +P + Y+ LI + G A L +M +G+L
Sbjct: 830 AKKSNKVEALRLYCEM---VSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVL 886
Query: 482 PDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSV 541
T++ LL W L E+ + + EL K + + S++ G
Sbjct: 887 HTSSTYDILL------NGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMT 940
Query: 542 WLGLRIHDT 550
W R+ T
Sbjct: 941 WEARRLLKT 949
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 38/357 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD++ + T+I R + +K + + ++ P+L + +++ L++ + +
Sbjct: 607 PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV---MKSRGVKPNSVIYNTLIHS 125
+M ++G TY +++ C +R + +L V M G+ + +YNTL+H
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQA-CSGSR--SPYVILEVHELMMGAGLHADITVYNTLVHV 723
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G +A ++ +M P+ +TF+ LI +CK +L NA + G P+
Sbjct: 724 LCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN 783
Query: 182 VVTITKVLELLCSVGRVMDAVEILEE-----------------SGEQGRLGKVKGGCRFL 224
+ T +L L S GR+ +A ++ E +G + KV+ R
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVE-ALRLY 842
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM KG +P TYN LIS + + G+++ A ++F++MK G+ TYD L+ G
Sbjct: 843 CEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGW--- 899
Query: 285 GRIDDGLKILQLMEDSKE----GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
++ +G ++ L++D KE SKG IS S+ + EA LK + K+
Sbjct: 900 SKLRNGTEVRILLKDMKELGFKPSKGTIS---SMSRAFSKPGMTWEARRLLKTLFKV 953
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 162/381 (42%), Gaps = 31/381 (8%)
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+L + + G++ A ++S + P + LV A + F VP
Sbjct: 24 SLALAFLRAGRLSAASHVVSSLPAPPPARLLRRLIPALASSGLVAA------ASRFRPVP 77
Query: 181 -DVVTITKVLELLCSVGRVMDAVEILEES-GEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
D +T+ ++ CS+ + A+ +L S G Q ++ + +
Sbjct: 78 GDPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAA------------------DTVS 119
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNI ++ E G A V ++M G+ W+ VT T + GL G + + + +++
Sbjct: 120 YNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLV 179
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+ + +N+++ G + AL +++M + L V + + GF G+
Sbjct: 180 RGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGD 239
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ A ++M +G P+VV + LI YC+ +R+ EA L + M G LP T +
Sbjct: 240 ADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSA 299
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ GLCR G A L E M IG P Y I +L + + LL +MV
Sbjct: 300 LVDGLCRDGRFSEAYALFRE-MDKIGVA--PNHVTYCTFIDSLAKVQRVNESLGLLGEMV 356
Query: 477 GKGILPDYLTWNSLLICLSQQ 497
+G+ D + + +++ L ++
Sbjct: 357 SRGVAMDLVMYTTVMDRLGKE 377
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 216/477 (45%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ + L++G C R +
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 165
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ Y+ L+ SLC GK G+A L+ M E PN V ++ +
Sbjct: 166 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 225
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
I + KE ++ A L ++ G PD+VT V+ LC R MD E R
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAMDKAEAFLRQMVNKR 284
Query: 214 L-----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ G+ K R KEM R LP+V T ++L+ S C+ G + A
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + + +Y+ ++ G + G + D + LM +G +N ++
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM--LGDGIAPDFYTFNVLIK 402
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D+A+ +M + P V I C G ++DA F+QMI++G P
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 462
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ Y+CLI +C + +A EL+ E+ +G F+++++ LC+ G V A +
Sbjct: 463 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + G P + YS L+ C G + A + MV GI P+ + + +L+
Sbjct: 523 D---LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/482 (25%), Positives = 209/482 (43%), Gaps = 67/482 (13%)
Query: 71 KMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MMA G + Y ++ G V L M RG+ P+ V YN+++H+LC
Sbjct: 206 RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 265
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + +A + + M PN+ T++ LI Y A+ + ++ +PDVV
Sbjct: 266 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 325
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL---------- 233
T++ ++ LC G++ +A ++ + +G+ V L KGCL
Sbjct: 326 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 385
Query: 234 ------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
P+ T+N+LI +Y G+LD A+ +FN+M+ G+ + VTY T+I LC G++
Sbjct: 386 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 445
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----------- 336
DD ++ M D +G YN ++ G +A E + ++
Sbjct: 446 DDAMEKFNQMID--QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 503
Query: 337 --------------------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
L P AV S+ + G+C+ G +E A R FD M+
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG-NVGT 429
G PNVV+Y L++ YC+ R+ E L +EM G P ++ ++ GL + G V
Sbjct: 564 GIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPA 623
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
+K E GI Y+ +++ L + F A L ++ + + +T N+
Sbjct: 624 KVKFHEMTESGIAMDICT----YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679
Query: 490 LL 491
++
Sbjct: 680 MI 681
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 181/395 (45%), Gaps = 37/395 (9%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D YT+ +L+K + + + M+ GVKP+ V Y T+I +LC+ GK
Sbjct: 385 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + M + P+ ++ LI +C +L+ A L+ + + G D+V +
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504
Query: 188 VLELLCSVGRVMDAVEILEESGEQGR----------------LGKVKGGCRFLKEMERKG 231
++ LC +GRVMDA I + + G +GK++ R M G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PNV Y L++ YC+ G +D L +F +M GI + + Y +I GL GR
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI--L 349
++ E ++ G I YN VL GL++ DEA+ K++ RA++ + I L
Sbjct: 625 --VKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL-----RAMNVKINIITL 677
Query: 350 GFCVDG-----NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+DG VE+AK F + VP+VV Y +I +E V EA ++ M
Sbjct: 678 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737
Query: 405 HGYLPIASTFNTVLSGLCRQGNV---GTALKLVEE 436
G P + N V+ L ++ + G L ++E
Sbjct: 738 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 772
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 194/464 (41%), Gaps = 73/464 (15%)
Query: 63 LARAFYRKKMMASGVQGD------DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
LA A + + AS QG +TYAILM +R + G++ N
Sbjct: 89 LAVALFNRA--ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 146
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I N L+ C+ + A +LL ++
Sbjct: 147 IIANHLLEGFCEAKRTDEALD------------------------------ILLHRTPEL 176
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV + + +L+ LC G+ A ++L E G + C PNV
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-----------------CSPNV 219
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN +I + + G ++ A D+F +M GI + VTY++++ LC +D L+
Sbjct: 220 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 279
Query: 297 MEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
M + R+ P YN+++YG Q EA+ K+M + + P V S+ +
Sbjct: 280 MVNK------RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 333
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G +++A+ FD M +G P+V Y+ +++ Y + + + ++L M G G P
Sbjct: 334 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 393
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
TFN ++ G + A+ + E MR G P Y +I ALC G A
Sbjct: 394 FYTFNVLIKAYANCGMLDKAMIIFNE-MR--DHGVKPDVVTYRTVIAALCRIGKMDDAME 450
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVM 514
QM+ +G+ PD +N L+ + LL E++S +M
Sbjct: 451 KFNQMIDQGVAPDKYAYNCLIQGFCTHGS---LLKAKELISEIM 491
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 159/353 (45%), Gaps = 34/353 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +I+ M++ + + + + P + + +++ L + +D A
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ GV D Y Y L++G C + +L+ + + G+ + V ++++I++LC
Sbjct: 452 F-NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 510
Query: 128 KNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G+V A+++ D+ P+ V +S+L+ YC + AL + + S G P+V
Sbjct: 511 KLGRVMDAQNIF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 569
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
V ++ C +GR+ + + + E ++G + G+ E
Sbjct: 570 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHE 629
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G ++ TYNI++ + D A+ +F +++ + N +T +T+I G+ R
Sbjct: 630 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 689
Query: 287 IDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQME 335
+++ + + S+ R+ P Y+ ++ L +E +EA + M+
Sbjct: 690 VEEAKDLFASI------SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDLA 64
D + V+RGL + R ++ + + N+ ++ N+++D + V+E DL
Sbjct: 638 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 697
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ R +++ S V TY+I++ L V + + M++ G +PNS + N ++
Sbjct: 698 ASISRSRLVPSVV-----TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 752
Query: 125 SLCKNGKVGRARSLMSDMEEPN 146
L K ++ RA + +S ++E N
Sbjct: 753 ELLKKNEIVRAGAYLSKIDERN 774
>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Brachypodium distachyon]
Length = 597
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 209/474 (44%), Gaps = 59/474 (12%)
Query: 44 PSLKIFNSILDVLVKED----IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
PS +I +++L ++ D AR F R + A D + L+ L +
Sbjct: 97 PSPRILSALLYKILSRSPSSSADAAR-FLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPG 155
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCK 159
+L M+ V+PN V Y L+ LCK G+VG A S++ M P +C
Sbjct: 156 MTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESD-----VC---- 206
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
PDVV + +++ LC GR+ AV+ +EE R+ V
Sbjct: 207 --------------------PDVVMLNNIVDGLCKTGRLQQAVKFVEE-----RMRSV-- 239
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
GC PN TYN L ++C G + A ++ M+ + ++ N VT +T++
Sbjct: 240 ----------HGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVG 289
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
GLC GR+ L+ + ++G Y++++ N A+E +M E
Sbjct: 290 GLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGN 349
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P A+ I G G ++DA M + G + Y+ LI +C+ +R+ EA E
Sbjct: 350 SPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYE 409
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L+ EM G P T+NT+LSGLC+ G+ +L+ + + G G P + LI
Sbjct: 410 LLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDG---GCRPSVVTFGTLIH 466
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM 509
C+ G A + M GI P+ + +N+L+ +C S+ T+ L + L +EM
Sbjct: 467 GYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTS-LAIELFDEM 519
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 181/420 (43%), Gaps = 30/420 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P FN++LD L + M + V+ + TY IL+KGLC RVGD +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194
Query: 104 LHVM--KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILIC 155
L M V P+ V+ N ++ LCK G++ +A + + PN VT++ L
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES------- 208
A+C+ N+ A L+ K P+ VT+ ++ LC VGRV A+E E
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEA 314
Query: 209 -----------GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
G V EM +G P+ Y +IS + G LD A
Sbjct: 315 RGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWS 374
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ MK G + Y+ LI G C R+++ ++L M+++ G + + YN++L G
Sbjct: 375 MATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEA--GLQPDVYTYNTLLSG 432
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + E L +M P V I G+C G +++A R F M E G PN
Sbjct: 433 LCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPN 492
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VIY+ LI C+ A EL EM +TFN +L GL + A +L++
Sbjct: 493 TVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMD 552
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 177/404 (43%), Gaps = 30/404 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVS--RFNMTPSLKIFNSILDVLVKED-IDLAR 65
P+ + +++GL +A + D + D +S ++ P + + N+I+D L K + A
Sbjct: 170 PNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAV 229
Query: 66 AFYRKKMMA-SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
F ++M + G + TY L C VG +L+ M+ V PN+V NT++
Sbjct: 230 KFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVG 289
Query: 125 SLCKNGKVGRARSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC G+VG A + N VT+S L+ A+ N+ A+ L + G
Sbjct: 290 GLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGN 349
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK-------GGCR--------- 222
PD + ++ L GR+ DA + + G K G CR
Sbjct: 350 SPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYE 409
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L EM+ G P+V TYN L+S C+ G + ++ M G + VT+ TLI G C
Sbjct: 410 LLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYC 469
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRA 341
G+ID+ L+I + M++S G + YN+++ L + A+E +M EK P
Sbjct: 470 KVGQIDEALRIFRSMDES--GIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPAN 527
Query: 342 VDRSLKILGFCVDGNV-EDAKRCFDQMIEEGGVPNVVIYDCLIH 384
V +L D N+ E A D M E P+ V D L+
Sbjct: 528 VTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILME 571
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +G Q D Y IL+ G C R+ + ++LL MK G++P+ YNTL+ LCK G
Sbjct: 379 MKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGD 438
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
L+ M + P+ VTF LI YCK + AL + G P+ V
Sbjct: 439 FLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNT 498
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ LC A+E+ +E M K NV T+N L+
Sbjct: 499 LIDFLCKSRDTSLAIELFDE-------------------MREKHVPANVTTFNALLKGLR 539
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ + + A ++ + M+ + ++VT D L+ L G D
Sbjct: 540 DKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETD 580
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + +I G R + +N+ + + + P + +N++L L K LA
Sbjct: 387 DAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELL 446
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
KM+ G + T+ L+ G C ++ + ++ M G++PN+VIYNTLI LCK+
Sbjct: 447 GKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKS 506
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
A L +M E N TF+ L+ + A L++ PD VTI
Sbjct: 507 RDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTI 566
Query: 186 TKVLELLCSVG 196
++E L +G
Sbjct: 567 DILMEWLPVIG 577
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 2/142 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P F T+I G + I++ ++ + + P+ I+N+++D L K D LA
Sbjct: 456 PSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIEL 515
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M V + T+ L+KGL N F+L+ +M+ P+ V + L+ L
Sbjct: 516 F-DEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLP 574
Query: 128 KNGKVGRARSLMSDMEEPNDVT 149
G+ R + M P +T
Sbjct: 575 VIGETDRLKHFMQHDTTPKRMT 596
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 208/477 (43%), Gaps = 62/477 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD + +I G AR + ++ + + PSLK N +L L K LA
Sbjct: 92 PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + +G D +TY ++ L ++ D L+ + + G P YN L++ LC
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A R ++ + P+ VT++ LI KE+ A L ++ G V D V
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ L G++ A + K M +GC+P+V T + +I
Sbjct: 272 CYTALIRGLLQAGKIPQASSV-------------------YKTMTSQGCVPDVVTLSTMI 312
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G + +A+ +F M+ G++ N V Y LI GLC ++D L++L M+
Sbjct: 313 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK----- 367
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
K +P +++ Y + I G C G+VE A+
Sbjct: 368 -KAFCTP-DTITYNIL----------------------------IDGLCKSGDVEAARAF 397
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
FD+M+E G P+V Y+ L+ +C+ A + +M+ P T+ T++SGLC+
Sbjct: 398 FDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCK 457
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+ + T L + M+ RG P S YS L+ LC+ G + ML +M G+
Sbjct: 458 RRQL-TKASLYFQHMK--ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV 511
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 190/443 (42%), Gaps = 67/443 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDLA 64
D + ++ L + + I D V + ++ TP++ +N++L+ L K E IDL
Sbjct: 164 DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 223
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R K++ +G D TY L+ GL R + +KL M RG+ ++V Y LI
Sbjct: 224 R-----KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIR 278
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L + GK+ +A S+ M P+ VT S +I CK + A+ + + + G P
Sbjct: 279 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFL 224
+ V + ++ LC ++ A+E+L + + + G V+ F
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM GC P+V TYNIL+S +C+ G D+A VF+DM S N VTY TLI GLC
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
++ Q M K R P +S +Y
Sbjct: 459 RQLTKASLYFQHM-------KERGCPPDSFVY---------------------------- 483
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S + G C G +E FD+M E GV N LI C+ RV EA L +
Sbjct: 484 SSLVDGLCKSGKLEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 542
Query: 405 HGYLPIASTFNTVLSGLCRQGNV 427
G +P +N+++S L + V
Sbjct: 543 EG-MPHPYAYNSIISTLIKSAKV 564
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 205/466 (43%), Gaps = 44/466 (9%)
Query: 46 LKIFNSILDVLVKEDIDLARAFYRKKMMAS---GVQGDDYTYAILMKGLCLTNRVGDGFK 102
+KIF + +D DLA + + ++S G Q +T L+ T R +
Sbjct: 29 VKIFQCL------KDADLAWELF--QCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGN 80
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAY 157
LL + P+ +N LI C + A +++ +MEE P+ T ++++
Sbjct: 81 LLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGL 140
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
CK ++ A+ E + + G D+ T T +++ L ++ DAV ++E+
Sbjct: 141 CKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEK---------- 190
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ GC P + TYN L++ C+ G L+ A+D+ + +G + + VTY +L
Sbjct: 191 ---------ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 241
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
I GL R + K+ + M + G Y +++ GL + + +A K M +
Sbjct: 242 IDGLGKEKRSFEAYKLFKEM--ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQ 299
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P V S I G C G + A R F M G PN V+Y LIH C+ ++ A
Sbjct: 300 GCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 359
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
E++ +M P T+N ++ GLC+ G+V A +E + G P Y+ L
Sbjct: 360 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA---GCKPDVYTYNIL 416
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT 499
+ C+ G +A + M P+ +T+ +L+ +C +Q T
Sbjct: 417 VSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLT 462
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 226/486 (46%), Gaps = 31/486 (6%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTYAIL 87
+ + D ++ P ++F+ +L +L + + D AR R M+ G+ +A L
Sbjct: 111 EFFRWADRQWKYRHAP--EVFDEMLVLLSRTRLHDPARRVMRL-MIRRGMPRGTRQFAHL 167
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---- 143
M ++ ++L +M+ G P+ I N ++ L G++ +A M
Sbjct: 168 MLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGV 227
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+P+ VT++ LI C +V+AL ++ G +PD ++ V+ LC RV D
Sbjct: 228 DPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQN 287
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+LE + G + G FL+E E K + Y+ + S+C
Sbjct: 288 LLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFC 347
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A ++ +M G + VTY ++ G C G +D K+++ M K G K
Sbjct: 348 LNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHM--YKNGCKPN 405
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ ++L GL + + EA E L + E+ + P A+ S+ + GF +G ++++
Sbjct: 406 TVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVM 465
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
QM+++G P V + LIHA C E + +A + M++ G F TV+ G RQG
Sbjct: 466 QMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQG 525
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
++ +AL L+ +DM R P Y+ ++ AL KG + A+ L+ +M+ +G+ P +
Sbjct: 526 DLESALSLL-DDMYLTNRH--PDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPV 582
Query: 486 TWNSLL 491
T+ +++
Sbjct: 583 TYRTVI 588
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 228/526 (43%), Gaps = 69/526 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARA 66
P F ++ RA + ++ L+ + P + I N ++VLV ID A
Sbjct: 158 PRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALE 217
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F ++M GV D TY L+KGLC R+ D +++ M G P+ + Y T++ L
Sbjct: 218 FA-ERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFL 276
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK +V ++L+ M + P+ VT+++LI K + AL L +S F D
Sbjct: 277 CKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDE 336
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V + + C GR+ +A EI+ EM KGC P+V TY+ +
Sbjct: 337 VGYSATVHSFCLNGRMAEAKEII-------------------GEMISKGCRPDVVTYSAV 377
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ +C G LD A + M +G N VT+ L+ GLC G+ + ++L E+ E
Sbjct: 378 VDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEE--E 435
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL-------------- 346
Y+ V++G RE + E+ + + QM + FP V+ +L
Sbjct: 436 WWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADA 495
Query: 347 ---------------------KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
I GF G++E A D M P+VV Y ++ A
Sbjct: 496 KDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDA 555
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
++ +++EA+ L+++M G P T+ TV+ C +G V L L+++ + G
Sbjct: 556 LGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEG--- 612
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
S Y+ +I+ LC G A+ LL +++ D T + L+
Sbjct: 613 --FSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILM 656
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 164/350 (46%), Gaps = 26/350 (7%)
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ L+ +Y + L +A+ +L+ G PD+ + +L GR+ A+E
Sbjct: 164 FAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALE------ 217
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
F + M R G P+V TYN LI C + AL++ + M +G
Sbjct: 218 -------------FAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLP 264
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ ++Y T++ LC R+ D +L+ M D+ G YN +++GL + DEAL
Sbjct: 265 DKISYFTVMSFLCKEKRVADVQNLLERMSDA--GIFPDQVTYNMLIHGLAKHGHADEALS 322
Query: 330 YLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+L++ E + V S + FC++G + +AK +MI +G P+VV Y ++ +C
Sbjct: 323 FLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFC 382
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
+ + +A ++MK M +G P T +L+GLC+ G A +L+ + P
Sbjct: 383 RIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEE---EWWTP 439
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ YS ++ +G + + +++QM+ KG P + N L+ L +
Sbjct: 440 SAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNE 489
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 204/470 (43%), Gaps = 96/470 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P +E F T+IRGL + D V + LV+E+I
Sbjct: 139 PYNEVTFTTLIRGLFAENKVKDAVH-------------------LFKKLVRENI------ 173
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++ Y +M GLC F LL +M+ KPN+ Y +I + C
Sbjct: 174 ---------CEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFC 224
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G + A SL+++M++ P+ T+S LI A CK N L + P+V
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC 284
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T V++ LC G+V DA EI+ R++ E KG P+V TYN++I
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIM----------------RYMIE---KGVDPDVITYNMII 325
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
Y G +D A ++F+ M I + ++Y+ LI G +ID+ +++ + E S++G
Sbjct: 326 DGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCR--EISQKG 383
Query: 304 SKGRISPYNSVLYGLYR-------ENQQDEAL-------------------------EYL 331
K I N +L+GL+ +N DE L E +
Sbjct: 384 LKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAM 443
Query: 332 KQMEKLFPRAVDRSLKIL-----GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
KL R D +++I G C +G ++ A F+++ G P+V+ Y +I Y
Sbjct: 444 SHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGY 503
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
CQE + EA +++++M +G L T+N ++ G R V +EE
Sbjct: 504 CQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEE 553
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 187/411 (45%), Gaps = 27/411 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E ++ TV+ GL + L+ + + P+ + + ++D K+ +
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M + D +TY+ L+ LC ++ + L M + PN +N++I LCK
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCK 295
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A +M M E P+ +T++++I Y + A + + + PD+++
Sbjct: 296 EGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIIS 355
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ ++ +A+++ CR E+ +KG P++ T N+L+
Sbjct: 356 YNILINGYARQKKIDEAMQV----------------CR---EISQKGLKPSIVTCNVLLH 396
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
E G SA + F++M G + T+ TL+ G G +++ + +E +E +
Sbjct: 397 GLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDT 456
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKR 362
+I Y +V+ GL + + D+A +++ L P + + I G+C +G +++AK
Sbjct: 457 NIQI--YTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKD 514
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+M + G + + Y+ ++ + + +V E ++E+ G + A+T
Sbjct: 515 MLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAAT 565
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 372 GVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNVGT 429
G+P N V + LI E +V++A L K++ P + TV++GLC++G+
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 430 ALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L +R + +GS P + Y+ +I A C+ G A+ LL +M K I PD T++
Sbjct: 197 AFDL----LRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYS 252
Query: 489 SLLICLSQQTTW 500
+L+ L + + W
Sbjct: 253 TLIDALCKLSQW 264
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 193/419 (46%), Gaps = 65/419 (15%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL 169
PN +N +I LCK G++ ARSL S M+E P+ VTF+ LI Y K L L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
+E+ G DVVT ++ C GR+ A + M+R
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYG-------------------YFAAMKR 286
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+G + NV T++ + ++C+ G++ A+ +F M++ G++ N TY LI G C GR+DD
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA-------- 341
+ +L M ++G + Y ++ GL +E + EA + L+ MEK RA
Sbjct: 347 AIVLLDEM--VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTL 404
Query: 342 --------------------------VDRSLK---ILGFCVDGNVEDAKRCFDQMIEEGG 372
+D SL I G C +++AK +M E G
Sbjct: 405 IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGL 464
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
PN +IY ++ A + +V EA +++++ G+ P T+ ++ GLC+ G++ A+
Sbjct: 465 EPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAIS 524
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ MR +G P Y+ L+ LC+ G A L +MV KG+ D + + +LL
Sbjct: 525 HFNK-MRDLGLD--PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALL 580
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 211/472 (44%), Gaps = 29/472 (6%)
Query: 43 TPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
P++ FN ++D L KE ++ AR+ + +M G D T+ L+ G + +
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLF-SRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L+ M+ G K + V YN LI+ CK G++ A + M+ N VTFS + A+
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
CKE + A+ L + G + T T +++ C GR+ DA+ +L+E QG
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ KV L+ ME+ G N Y LI + + AL + ++
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
MK G+ + Y LI+GLC+ ++D+ +L M++S G + Y +++ ++
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES--GLEPNYIIYTTMMDACFKS 481
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ EA+ L+++ P + I G C G++++A F++M + G PNV Y
Sbjct: 482 GKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
L+ C+ + EA +L EM G + +L G +QGN+ A L +
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFAL---KAK 598
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
I G Y+ I C A + +M+G GI PD +N L+
Sbjct: 599 MIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 179/408 (43%), Gaps = 55/408 (13%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
F++ +D KE + +M G+ +++TY L+ G C R+ D LL M
Sbjct: 296 FSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMV 355
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLV 164
+GV N V Y L+ LCK KV A ++ ME+ N++ ++ LI + +N
Sbjct: 356 RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSE 415
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------ 212
AL LL + + G D+ +++ LC+V ++ +A +L + E G
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMM 475
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+ GKV L+++ G PNV TY LI C+ G +D A+ FN M+ G+
Sbjct: 476 DACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLD 535
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
N Y L+ GLC G +++ +++ M +G Y ++L G
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEM--VHKGMSLDKVVYTALLDG----------- 582
Query: 329 EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
YLKQ GN+ DA +MI+ G ++ Y C I +C
Sbjct: 583 -YLKQ---------------------GNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCN 620
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ EA E+ EM GHG P + +N ++S + GN+ A+ L +E
Sbjct: 621 LNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 164/372 (44%), Gaps = 58/372 (15%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+E + +I G +A ++D + D + R + ++ + ++D L KE +A A
Sbjct: 327 NEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKER-KVAEAEDV 385
Query: 70 KKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+MM +GV+ ++ Y L+ G + LL MK++G++ + +Y LI LC
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K+ A+SL++ M+E PN + ++ ++ A K + A+ +L+K GF P+V+T
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVIT 505
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC G + +A+ +M G PNV Y L+
Sbjct: 506 YCALIDGLCKAGSIDEAIS-------------------HFNKMRDLGLDPNVQAYTALVD 546
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR-----------IDDGLKI 293
C+ G L+ A+ +FN+M G+S + V Y L+ G G ID GL++
Sbjct: 547 GLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQL 606
Query: 294 --------------LQLMEDSKE--------GSKGRISPYNSVLYGLYRENQQDEALEYL 331
L +M +++E G + YN ++ + +EA+
Sbjct: 607 DLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQ 666
Query: 332 KQMEKLFPRAVD 343
+ME++ P D
Sbjct: 667 DEMERVLPSCTD 678
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + ++ GL + +N+ V+ + + M+ ++ ++LD +K+ +L AF
Sbjct: 536 PNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQG-NLHDAFA 594
Query: 69 RK-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K KM+ SG+Q D + Y + G C N + + ++ M G+ P+ +YN LI
Sbjct: 595 LKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQ 654
Query: 128 KNGKVGRARSLMSDME 143
K G + A SL +ME
Sbjct: 655 KLGNLEEAISLQDEME 670
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 229/504 (45%), Gaps = 49/504 (9%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+A LV N P + ++ L + + + +M A+ + TY+ L+ G
Sbjct: 247 EALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 306
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
++G ++L++M G P+ I+N+L+H+ C +G A L+ M + P
Sbjct: 307 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 366
Query: 148 VTFSILICAYCKEENLVN--ALVLLEKSFS----FGFVPDVVTITKVLELLCSVGRVMDA 201
V ++ILI + C +++ +N L L EK++S G V + + ++ LCS G+ A
Sbjct: 367 VVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 426
Query: 202 VEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ E QG + K++ +EM+R G + +V TY I++ S
Sbjct: 427 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 486
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+++ A FN+M+ G + N VTY LI ++ ++ + M EG
Sbjct: 487 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM--LSEGCL 544
Query: 306 GRISPYNSVLYGLYRENQQDEALE----------------YLKQME--KLFPRAVDRSLK 347
I Y++++ G + Q ++A + Y KQ + P V
Sbjct: 545 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 604
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ GFC VE+A++ D M EG PN ++YD LI C+ ++ EA E+ EM+ HG+
Sbjct: 605 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 664
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+++++ + A K++ + + P Y+ +I LC+ G
Sbjct: 665 PATLYTYSSLIDRYFKVKRQDLASKVLS---KMLENSCAPNVVIYTEMIDGLCKVGKTDE 721
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A L+ M KG P+ +T+ +++
Sbjct: 722 AYKLMQMMEEKGCQPNVVTYTAMI 745
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 218/464 (46%), Gaps = 27/464 (5%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ G D TY+ ++ LC +++ F L MK G+ + Y ++ S CK
Sbjct: 431 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 490
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR ++M E PN VT++ LI AY K + + A L E S G +P++VT
Sbjct: 491 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 550
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ +++ C G+V A +I E + V + K+ + PNV TY L+
Sbjct: 551 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVD---MYFKQYDDNSERPNVVTYGALLDG 607
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C++ ++ A + + M ++G N + YD LI GLC G++D+ ++ M S+ G
Sbjct: 608 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFP 665
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y+S++ ++ +QD A + L +M P V + I G C G ++A +
Sbjct: 666 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 725
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y +I + ++ EL++ M G P T+ ++ C+
Sbjct: 726 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 785
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPG-SGHYSPLIKALCEKGGFQS---ASMLLVQMVGKG 479
G + A L+EE + + P + Y +I+ GF S+ L+ +G+
Sbjct: 786 NGALDVAHNLLEE----MKQTHWPTHTAGYRKVIE------GFNKEFIESLGLLDEIGQD 835
Query: 480 ILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHELSA 521
+L+ LLI + Q + L LL E+ +F + + S+
Sbjct: 836 DTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS 879
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 207/477 (43%), Gaps = 49/477 (10%)
Query: 40 FNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
F PS +N ++ +K D + + ++M + ++ D +T LC +VG
Sbjct: 188 FRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC---KVGK 244
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
+ L ++++ P++V Y LI LC+ A ++ M PN VT+S L+C
Sbjct: 245 WREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 304
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
++ L +L G P ++ C+ SG+
Sbjct: 305 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT-------------SGDHSYAY 351
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYC------ETGVLDSALDVFNDMKIDGISW 269
K+ LK+M + G +P YNILI S C +LD A +++M G+
Sbjct: 352 KL------LKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVL 405
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N + + R LCS G+ + +++ M +G S Y+ VL L ++ + A
Sbjct: 406 NKINVSSFTRCLCSAGKYEKAFSVIREM--IGQGFIPDTSTYSKVLNYLCNASKMELAFL 463
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M++ L ++ + FC G +E A++ F++M E G PNVV Y LIHAY
Sbjct: 464 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 523
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE-----EDMRGI- 441
+ ++V A+EL + M G LP T++ ++ G C+ G V A ++ E +D+ +
Sbjct: 524 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVD 583
Query: 442 -------GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y L+ C+ + A LL M +G P+ + +++L+
Sbjct: 584 MYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 640
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 181/390 (46%), Gaps = 47/390 (12%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
D+D+ Y K+ + + + TY L+ G C ++RV + KLL M G +PN ++Y
Sbjct: 581 DVDM----YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 636
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFSILICAYCKEENLVNALVLLEKSFS 175
+ LI LCK GK+ A+ + ++M E P + T+S LI Y K + A +L K
Sbjct: 637 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 696
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
P+VV T++++ LC VG+ +A ++++ ME KGC PN
Sbjct: 697 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM-------------------MEEKGCQPN 737
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY +I + G +++ L++ M G++ N+VTY LI C G +D +L+
Sbjct: 738 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 797
Query: 296 LMEDSK-----EGSKGRISPYNSVL---YGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
M+ + G + I +N GL E QD+ +L ++ +D +K
Sbjct: 798 EMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFL----SVYRLLIDNLIK 853
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+E A R +++ V Y+ LI + C +V A +L EMT
Sbjct: 854 A------QRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 907
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
G +P +F +++ GL R + AL L++
Sbjct: 908 GVIPEMQSFCSLIKGLFRNSKISEALLLLD 937
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 10/280 (3%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+ TYN LI ++ + LDSA + +M + + + T LC G+ + L +
Sbjct: 192 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 251
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGF 351
++ E Y ++ GL + +EA+++L +M P V S + G
Sbjct: 252 VE-----TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 306
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+ KR + M+ EG P+ I++ L+HAYC A +L+K+M G++P
Sbjct: 307 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 366
Query: 412 STFNTVLSGLCRQGNVGT--ALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+N ++ +C + L L E+ + G + + S + LC G ++ A
Sbjct: 367 VVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 426
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
++ +M+G+G +PD T++ +L L + L LL E
Sbjct: 427 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFE 466
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 141/554 (25%), Positives = 235/554 (42%), Gaps = 105/554 (18%)
Query: 26 MINDVVKATDLVSRFNMTPSLKIF-------NSILDVL-VKEDI-DLARAFYRKKMMASG 76
++N ++ TD S FN + N +L++L + + D+ F M
Sbjct: 97 VLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVF--NLMQNQI 154
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA- 135
++ D TY I+ KGL + + M+ G N+ YN LIH L ++G A
Sbjct: 155 IKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREAL 214
Query: 136 ---RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
R ++ + +P+ TFS L+ A K + LLE+ S G P++ T T + +L
Sbjct: 215 EMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVL 274
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
GR G++ CR +K ME GC P+V TY +LI + C G L
Sbjct: 275 -------------------GRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKL 315
Query: 253 DSALDVF-----------------------------------NDMKIDGISWNFVTYDTL 277
D A+++F ++M+ DG + + +T+ L
Sbjct: 316 DDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTIL 375
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
+ LC G ID+ +L +M K+G + YN+++ GL R N+ D+AL+ ME L
Sbjct: 376 VNALCKAGNIDEAFHLLDVMR--KQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL 433
Query: 338 --FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
P A L I + G + A F++M G PN+V + +++ + R+REA
Sbjct: 434 GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA 493
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV--------EEDMRGIGR--GS 445
+ + +G P + T+N ++ + G V A++L+ E D+ I +
Sbjct: 494 KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINT 553
Query: 446 LPGSGH----------------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
L +G Y+ LI L ++G Q A L M G G P+
Sbjct: 554 LYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPN 613
Query: 484 YLTWNSLLICLSQQ 497
+T+N++L CL +
Sbjct: 614 TITFNTILDCLCKN 627
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 218/490 (44%), Gaps = 33/490 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P F ++ G+ R V + + + P++ + + VL + ID A
Sbjct: 227 PSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA-CR 285
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M G D TY +L+ LC ++ D +L MK+ KP+ V Y T++
Sbjct: 286 IMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFS 345
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G +GR + S+ME P+ +TF+IL+ A CK N+ A LL+ G +P++
Sbjct: 346 DCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLH 405
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ L V R+ DA+++ ME G +P TY + I
Sbjct: 406 TYNTLISGLLRVNRLDDALDLF-------------------NNMETLGVVPTAYTYILFI 446
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
Y ++G D AL+ F MKI GI+ N V + + L GR+ + I ++ + G
Sbjct: 447 DFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN--G 504
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YN ++ + Q DEA+E L M + P + + I G V++A
Sbjct: 505 LAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAW 564
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ F ++ + P VV Y+ LI +E +V+ A EL MTG+G P TFNT+L L
Sbjct: 565 KMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCL 624
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ V ALK++ + +P ++ +I L + A L QM K +
Sbjct: 625 CKNDEVDLALKML---YKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLT 680
Query: 482 PDYLTWNSLL 491
PD +T +LL
Sbjct: 681 PDCVTLCTLL 690
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/547 (23%), Positives = 235/547 (42%), Gaps = 69/547 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA-RA 66
PD + +++ +A +++ ++ +S P + + NS+++ L K +D A +
Sbjct: 507 PDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKM 566
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F R K M + TY L+ GL +V +L M G PN++ +NT++ L
Sbjct: 567 FCRLKDMK--LAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCL 624
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKN +V A ++ M P+ +TF+ +I E+ + +A+ L + PD
Sbjct: 625 CKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDC 683
Query: 183 VTITKVLELLCSVGRVMDAVEILE------------------------ESGEQ------- 211
VT+ +L + G + DA +I E ++G +
Sbjct: 684 VTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGD 743
Query: 212 ----GRLGK--------VKGGCR----------FLKEMERKGCLPNVDTYNILISSYCET 249
GR+ K +K C+ F++ + G P +++YN LI +
Sbjct: 744 RLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGV 803
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
+ A ++F +MK G + + TY+ L+ G+I++ ++ + M S K
Sbjct: 804 HNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSS--CKPNTI 861
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+N ++ L + N D+AL+ + P + G G +E+AK F++M
Sbjct: 862 THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
++ G PN IY+ LI+ + + V A EL K M G P ++ +++ LC G V
Sbjct: 922 VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
AL E+ + G S Y+ +I L + A L +M +GI PD T+
Sbjct: 982 DDALHYFEKLKQ---TGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038
Query: 488 NSLLICL 494
NSL++ L
Sbjct: 1039 NSLILNL 1045
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 166/370 (44%), Gaps = 28/370 (7%)
Query: 52 ILDVLVKEDIDL-ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR 110
I+ VL K L A++ + + GV+ +Y L++G + + L MK+
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
G P+ YN L+ + K+GK+ L M +PN +T +I+I K +L A
Sbjct: 820 GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L L S F P T +L+ L GR+ +A E+ EE
Sbjct: 880 LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEE------------------- 920
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M GC PN YNILI+ + +TG +++A ++F M +GI + +Y +L+ LC GR
Sbjct: 921 MVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGR 980
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+DD L + ++ + G YN ++ GL R ++ +EAL +M+ + P
Sbjct: 981 VDDALHYFEKLKQT--GLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTY 1038
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ IL V G VE A + ++++ G PNV Y+ LI Y A + K M
Sbjct: 1039 NSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMV 1098
Query: 405 HGYLPIASTF 414
G P TF
Sbjct: 1099 GGCSPNTGTF 1108
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 213/490 (43%), Gaps = 31/490 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F ++ L +A I++ D++ + + P+L +N+++ L++ + +D A
Sbjct: 367 PDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDL 426
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M GV YTY + + + R + MK RG+ PN V N ++SL
Sbjct: 427 F-NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLA 485
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ A+ + + ++ P+ VT+++++ Y K + A+ LL PD++
Sbjct: 486 EMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDII 545
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
I ++ L GRV +A ++ CR LK+M+ P V TYN LI
Sbjct: 546 VINSLINTLYKAGRVDEAWKMF---------------CR-LKDMKLA---PTVVTYNTLI 586
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + G + A+++F M +G N +T++T++ LC +D LK+L M +
Sbjct: 587 AGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM--TTMN 644
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKR 362
+ +N++++GL E + +A+ QM+K+ P V + G +G +EDA +
Sbjct: 645 CMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFK 704
Query: 363 CFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ + GV + ++ L+ + + + S ++ L
Sbjct: 705 IAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVL 764
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ A + + +G P Y+ LI+ + A L +M G
Sbjct: 765 CKHKQALVAQSVFIRFTKELGVK--PTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCA 822
Query: 482 PDYLTWNSLL 491
PD T+N LL
Sbjct: 823 PDVFTYNLLL 832
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 188/451 (41%), Gaps = 64/451 (14%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME--- 143
L+ L RV + +K+ +K + P V YNTLI L K G+V RA L + M
Sbjct: 550 LINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNG 609
Query: 144 -EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
PN +TF+ ++ CK + + AL +L K + +PDV+T ++ L RV DA+
Sbjct: 610 CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAI 669
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND- 261
+ + +K+M C+ T L+ + G+++ A + D
Sbjct: 670 WLFHQ----------------MKKMLTPDCV----TLCTLLPGVVKNGLMEDAFKIAEDF 709
Query: 262 -----MKIDGISWNFV---------TYDTLIRG--LCSGGRIDDG---LKILQLMEDSKE 302
+ +D W + T T++ G L G DG + I++++ K+
Sbjct: 710 VHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQ 769
Query: 303 ---------------GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
G K + YN ++ G + + A +M+ P +
Sbjct: 770 ALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYN 829
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
L + G + + ++QMI PN + ++ +I + + +A +L ++
Sbjct: 830 LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+ P T+ +L GL + G + A +L EE + G P + Y+ LI + G
Sbjct: 890 DFSPTPCTYGPLLDGLLKSGRLEEAKELFEE---MVDYGCRPNNAIYNILINGFGKTGDV 946
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+A L +MV +GI PD ++ SL+ CL +
Sbjct: 947 NTACELFKRMVREGIRPDLKSYTSLVGCLCE 977
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 127/290 (43%), Gaps = 22/290 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + ++ G++ IN++ + + + + P+ N I+ LVK + +D A
Sbjct: 823 PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDL 882
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +++ TY L+ GL + R+ + +L M G +PN+ IYN LI+
Sbjct: 883 FYD-LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A L M P+ +++ L+ C+ + +AL EK G D +
Sbjct: 942 KTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI 1001
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+++ L R+ +A+ + +E +G G V+ + +E+
Sbjct: 1002 AYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ G PNV TYN LI Y +G DSA V+ M + G S N T+ L
Sbjct: 1062 QFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 199/392 (50%), Gaps = 38/392 (9%)
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKE 160
++++SR + P+ V ++ L+ ++ K+ SL +ME + T++I+I C+
Sbjct: 59 NMIQSRPL-PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRC 117
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
V AL ++ K FG+ PDVVT++ ++ C RV AV+++ +
Sbjct: 118 SRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSK------------- 164
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
ME C +V YN +I +C+TG++++AL +F M+ DG+ + VTY++L+ G
Sbjct: 165 ------MEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTG 218
Query: 281 LCSGGRIDDGLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
LC GR D ++++ +M D + + +++ RE + EA ++ ++M +
Sbjct: 219 LCCSGRRSDAARLMRDMVMRDIVPN----VITFTALINAFVREGKFLEAKKFYEEMIRRC 274
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + I G C+ G V++AK+ D M+ +G P+VV Y+ LI+ +C+ +RV E +
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
+L++EM+ G + TFNT++ G + G A ++ GS P YS L+
Sbjct: 335 KLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSR------MGSRPNIRTYSILL 388
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
LC + A +L M + D T+N
Sbjct: 389 YGLCYNWRVEKALVLFESMQKSEMELDITTYN 420
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 190/402 (47%), Gaps = 25/402 (6%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ F+ +L + K ++ DL + + M G+ D YTY I++ LC +R
Sbjct: 67 PSIVEFSKLLSNIAKSKNYDLVISLFHN-MEICGIGHDLYTYNIVINCLCRCSRFVIALS 125
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYC 158
++ M G +P+ V ++LI+ C+ +V A L+S MEE + V ++ +I +C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFC 185
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------ 212
K + NALVL + G D VT ++ LC GR DA ++ + +
Sbjct: 186 KTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVI 245
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R GK +F +EM R+ P+V TYN +I C G +D A + + M
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLM 305
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + VTY+TLI G C R+D+G K+++ E S+ G +N+++ G ++
Sbjct: 306 VTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVR--EMSQRGLVVDTVTFNTIIQGYFQAG 363
Query: 323 QQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ D A E +M P S+ + G C + VE A F+ M + ++ Y+ +
Sbjct: 364 RPDAAQEIFSRMGSR-PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIV 422
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
IH C V +A +L ++ G P T+ T++SG CR+
Sbjct: 423 IHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 198/430 (46%), Gaps = 29/430 (6%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
IQS P SI F ++ + +++ + V+ + + L +N +++ L +
Sbjct: 61 IQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRF 120
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ KMM G + D T + L+ G C NRV L+ M+ K + VIYNT+
Sbjct: 121 VIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTI 180
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I CK G V A L ME + VT++ L+ C +A L+
Sbjct: 181 IDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDI 240
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEE--------------SGEQGRL--GKVKGGCR 222
VP+V+T T ++ G+ ++A + EE S G G+V +
Sbjct: 241 VPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQ 300
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L M KGC P+V TYN LI+ +C+T +D + +M G+ + VT++T+I+G
Sbjct: 301 ILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYF 360
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GR D +I S+ GS+ I Y+ +LYGL + ++AL + M+K +
Sbjct: 361 QAGRPDAAQEIF-----SRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELD 415
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I G C+ GNVEDA F + +G P+VV Y +I +C++ +A L +
Sbjct: 416 ITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYR 475
Query: 401 EMTGHGYLPI 410
+M G LP+
Sbjct: 476 KMQEDGLLPL 485
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/543 (23%), Positives = 227/543 (41%), Gaps = 63/543 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P S + +I + AR ++ + + +F +++ L +E ++ A A
Sbjct: 180 PAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALAL 239
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ S ++ D Y + + V +K H +KS+G+KP+ V Y ++I LC
Sbjct: 240 V-DEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLC 298
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A L ME P ++ +I Y NA LL++ G +P VV
Sbjct: 299 KAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVV 358
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGR---------------LGKVKGGCRFLKEME 228
+ +L L +V +A+ + E + GKV+ EME
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEME 418
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PN+ T NI++ C+ + A ++F G + N VTY +LI GL G +D
Sbjct: 419 HAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVD 478
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
D ++ + M D+ G Y S++ + ++++ + K+M + R L +
Sbjct: 479 DAYRLFENMLDT--GHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNR---RGCQPDLTL 533
Query: 349 LGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
L +D G+VE + F+ + G +P+V Y LIH + + RE S + M
Sbjct: 534 LNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMK 593
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE---------------DMRGIGRGSLPG 448
G+ A +N V+ G C+ G + A +++EE + G+ +
Sbjct: 594 QQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLD 653
Query: 449 SGH-----------------YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ YS LI + G A ++L +M+ KG+ P+ TWNSL+
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 713
Query: 492 ICL 494
L
Sbjct: 714 DAL 716
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/518 (24%), Positives = 229/518 (44%), Gaps = 44/518 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
P + T+I G G A + K D + PS+ FNSIL L K +D A
Sbjct: 320 PCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTL 379
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M + + TY I++ LC+ +V + + + M+ G+ PN + N ++ LC
Sbjct: 380 F--EAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLC 437
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K A + + PN VT+ LI K+ N+ +A L E G + V
Sbjct: 438 KAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPV 497
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ GR D +I +E +G + G V+ G +++
Sbjct: 498 VYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDI 557
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LP+V +Y+ILI + G +F+ MK G + + Y+ ++ G C G++
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKL 617
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
D ++L+ M+ + ++ Y S++ GL + ++ DEA Y+ LF A + ++
Sbjct: 618 DKAYEVLEEMKVKR--VPPTVATYGSIIDGLAKIDRLDEA--YM-----LFEEAKSKGIE 668
Query: 348 ---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
I GF G +++A ++M+++G PNV ++ L+ A + E + EA
Sbjct: 669 LNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALIC 728
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ M P T++ +++GLCR A +E + +G +P Y+ +I
Sbjct: 729 FQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK---QGLVPNVVTYTTMIAG 785
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L + G A L + G PD ++N+L+ +S
Sbjct: 786 LAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSH 823
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 193/443 (43%), Gaps = 30/443 (6%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE- 59
M H+ P ++ I V R L +A+ + + S+ P+ + S++D L K+
Sbjct: 417 MEHAGLFPNLLTVNIMVDR-LCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKG 475
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++D A + + M+ +G + Y L++ + R DG K+ M RG +P+ +
Sbjct: 476 NVDDAYRLF-ENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLL 534
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NT + + K G V + R++ D++ P+ ++SILI K +
Sbjct: 535 NTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQ 594
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
GF D V++ C G++ A E+LEE M+ K P
Sbjct: 595 QGFALDARAYNAVVDGFCKSGKLDKAYEVLEE-------------------MKVKRVPPT 635
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V TY +I + LD A +F + K GI N + Y +LI G GRID+ IL+
Sbjct: 636 VATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILE 695
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCV 353
M K+G + +NS++ L + + +EAL + M+ K P S+ I G C
Sbjct: 696 EM--MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
A + +M ++G VPNVV Y +I + + +A L + +G P A++
Sbjct: 754 VQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAAS 813
Query: 414 FNTVLSGLCRQGNVGTALKLVEE 436
FN ++ G+ A + EE
Sbjct: 814 FNALIEGMSHANRAIEAYHVFEE 836
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 136/312 (43%), Gaps = 12/312 (3%)
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D+ + KVLE + +G + + R ++ R + M R P Y
Sbjct: 127 DLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYT 186
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+LI + E + AL++ M+ G + TL+R L GR++ L ++ D
Sbjct: 187 VLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALV----DE 242
Query: 301 KEGS--KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+GS + I YN + + D A ++ +++ L P V + I C G
Sbjct: 243 VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGR 302
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ +A+ F QM E VP Y+ +I Y + A +L+ ++ G +P +FN+
Sbjct: 303 LSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNS 362
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+ L ++ V AL L E + + + P S Y+ +I LC G + A M+ +M
Sbjct: 363 ILTCLGKKRKVDEALTLFE----AMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEME 418
Query: 477 GKGILPDYLTWN 488
G+ P+ LT N
Sbjct: 419 HAGLFPNLLTVN 430
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 6/231 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PP + + ++I GL + +++ + + ++ +++S++D K ID A
Sbjct: 633 PPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYL 692
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++MM G+ + YT+ LM L + + MK PN+ Y+ LI+ L
Sbjct: 693 IL-EEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGL 751
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ K +A +M++ PN VT++ +I K N+ +A L E+ + G PD
Sbjct: 752 CRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDA 811
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ ++E + R ++A + EE+ +G VK L + + CL
Sbjct: 812 ASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECL 862
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 14/269 (5%)
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP D YN ++ L + V +M + G L+ L R+DD +
Sbjct: 112 LP-ADAYNAVLPFLSHD--LAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAER 168
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPRAVDRSLKIL-G 350
++ M K + S Y ++ + Q + ALE L+QM+++ + V ++
Sbjct: 169 VIAAMRRLK--FRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRA 226
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+G VE A D++ P++V+Y+ I + + V A + E+ G P
Sbjct: 227 LAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPD 286
Query: 411 ASTFNTVLSGLCRQGNVGTALKLV--EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
++ +++ LC+ G + A +L E R + P + Y+ +I G F++A
Sbjct: 287 DVSYTSMIWVLCKAGRLSEAEELFGQMETERAV-----PCAYAYNTMIMGYGSAGQFENA 341
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
LL Q+ +G +P +++NS+L CL ++
Sbjct: 342 YKLLDQLKERGCIPSVVSFNSILTCLGKK 370
>gi|357463937|ref|XP_003602250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491298|gb|AES72501.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 946
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 147/576 (25%), Positives = 241/576 (41%), Gaps = 88/576 (15%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMAS 75
+I L + +N + D + + P+ + I+ L + DL +A +M +
Sbjct: 200 LINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALGTKGGDLKQASGVFDEMKEA 259
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV + Y YA ++GLC ++ G+ LL ++ + Y +I C K+ +A
Sbjct: 260 GVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALRENNAPIDVYAYTAVIRGFCNEMKLDKA 319
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ DME P+ +S LIC YCK +LV AL L E G + V ++ +L
Sbjct: 320 MQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLYEDMILKGIKTNCVIVSCILHC 379
Query: 192 LCSVG---RVMDAVEILEESG-------------EQGRLGK------------------- 216
+G RV+D + +++SG +LGK
Sbjct: 380 FAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFD 439
Query: 217 -------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
+KG C KEME KG P+V YN+L + C + A+D+ N
Sbjct: 440 IKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLN 499
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED-SKEGSKGRISPYNSV----- 314
M G+ N T+ +I G CS G+I++ M+D S E +S Y
Sbjct: 500 YMDSQGVKPNSTTHKIIIEGFCSEGKIEEAEGYFNSMKDESVEIYTAMVSGYCEADLIEK 559
Query: 315 LYGLYRE--NQQDEALEY--LKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
Y L+ E N+ D A E LKQ+ K+ V + C GN++ A+ FD +
Sbjct: 560 SYELFHELSNRGDTAQESSCLKQLSKVLYSKV-----LAELCQKGNMQRARSLFDFFLGR 614
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG----- 425
G P+VV Y +I +YC ++EA +L ++M G P T+ +L G +Q
Sbjct: 615 GFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEH 674
Query: 426 ---------NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ + + DM+ R P Y+ LI + F+ A L +++
Sbjct: 675 FSSQHGKGKDAPYDVSTIWRDMK--DREVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVM 732
Query: 477 GKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS 511
+G+ PD +T+ +L L+ + + + L NEM S
Sbjct: 733 KRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSS 768
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 153/341 (44%), Gaps = 32/341 (9%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M G + D Y +L GLC V + LL+ M S+GVKPNS + +I C
Sbjct: 464 KEMEEKGFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSE 523
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFS-FGFVPDVVTITKV 188
GK+ A + M++ + ++ ++ YC+ + L+EKS+ F + + +
Sbjct: 524 GKIEEAEGYFNSMKDESVEIYTAMVSGYCEAD-------LIEKSYELFHELSNRGDTAQE 576
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
L + +V+ + ++L E ++G + + + F +G P+V TY I+I SYC
Sbjct: 577 SSCLKQLSKVLYS-KVLAELCQKGNMQRARSLFDFFLG---RGFTPDVVTYTIMIKSYCT 632
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L A D+F DMK GI + +TY L+ G R + S + KG+
Sbjct: 633 MNCLQEAHDLFQDMKSRGIKPDVITYTVLLDGKSKQARSKEHF--------SSQHGKGKD 684
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
+PY+ + ++R+ + E + P V ++ I G N EDA R F++++
Sbjct: 685 APYD--VSTIWRDMKDRE----------VSPDVVIYTVLIDGHIKVDNFEDAIRLFNEVM 732
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
+ G P+ V Y L A L EM+ G P
Sbjct: 733 KRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKGMTP 773
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 223 FLKEMERKGCLPNV-----------------------------------DTYNILISSY- 246
F+ ++ R G LPN+ TY I+I +
Sbjct: 181 FMFQIRRFGILPNIFACNFLINRLVKCDQVNMAFEIFDRIKSLGLCPNHHTYAIIIKALG 240
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ G L A VF++MK G++ N Y I GLC+ + D G +L+ + ++ +
Sbjct: 241 TKGGDLKQASGVFDEMKEAGVTPNSYCYAAYIEGLCNNHQSDLGYDLLRALREN--NAPI 298
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ Y +V+ G E + D+A++ ME +L P S I G+C ++ A +
Sbjct: 299 DVYAYTAVIRGFCNEMKLDKAMQVFYDMEWQRLVPDCHVYSSLICGYCKTHDLVKALDLY 358
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ MI +G N VI C++H + + + KE+ G +N V L +
Sbjct: 359 EDMILKGIKTNCVIVSCILHCFAEMGEDSRVVDTFKEVKQSGVFLDGVAYNIVFDSLFKL 418
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + ++ ED++ + HY+ IK C +G A ++ +M KG PD
Sbjct: 419 GKMDEVAGML-EDLKSMHIDF--DIKHYTTFIKGYCLQGKPDKAYIIFKEMEEKGFKPDV 475
Query: 485 LTWNSL 490
+ +N L
Sbjct: 476 VAYNVL 481
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/451 (28%), Positives = 210/451 (46%), Gaps = 30/451 (6%)
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
L+ +F R++ SG DY +L GL + D L VM P+ + ++ L
Sbjct: 28 LSFSFCRRRAF-SGKTSYDYR-EVLRTGLS-DIELDDAIGLFGVMAQSRPFPSIIEFSKL 84
Query: 123 IHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ ++ K K S ME N T++ILI +C+ L AL LL K G+
Sbjct: 85 LSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGY 144
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCR 222
PD+VT+ +L C R+ DAV ++++ E G K
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+ M ++GC P++ TY +++ C+ G D AL++ N M+ I N V Y T+I LC
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
DD L + ME+ +G + + Y+S++ L + +A L M K+ P
Sbjct: 265 KYRHEDDALNLFTEMEN--KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V S I F G + A++ +++MI+ PN+ Y LI+ +C +R+ EA ++++
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
M LP T+NT+++G C+ V ++L E + RG + + Y+ LI
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ---RGLVGNTVTYTTLIHGFF 439
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +A M+ QMV G+ P+ LT+N LL
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 205/476 (43%), Gaps = 32/476 (6%)
Query: 6 QSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
QS P SI F ++ + + + V+ + + ++ +L +N +++ +
Sbjct: 71 QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLS 130
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
KMM G + D T L+ G C NR+ D L+ M G KP++V + TLI
Sbjct: 131 LALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLI 190
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H L + K A +L+ M + P+ VT+ ++ CK + AL LL K +
Sbjct: 191 HGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE 250
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+VV + V++ LC DA+ + E ME KG PNV TY
Sbjct: 251 ANVVIYSTVIDSLCKYRHEDDALNLFTE-------------------MENKGVRPNVITY 291
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ LIS C G A + +DM I+ N VT+ LI G++ K+ + E
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYE--EM 349
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
K I Y+S++ G ++ EA + L+ M + P V + I GFC V
Sbjct: 350 IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV 409
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+ F +M + G V N V Y LIH + Q A + K+M G P T+N +
Sbjct: 410 DKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 469
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
L GLC+ G + A+ + E R P Y+ +I+ +C+ G ++ + V
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTME---PDIYTYNIMIEGMCKAGKWKMGGIYFV 522
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 221/464 (47%), Gaps = 32/464 (6%)
Query: 44 PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ F+ +L + K + DL +F +KM G+ + YTY IL+ C +R+
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISF-GEKMEILGISHNLYTYNILINCFCRCSRLSLALA 134
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M G +P+ V N+L++ C ++ A +L+ M E P+ VTF+ LI
Sbjct: 135 LLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF 194
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ G PD+VT V+ LC G A+ +L +
Sbjct: 195 LHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNK----------- 243
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME NV Y+ +I S C+ D AL++F +M+ G+ N +TY +LI
Sbjct: 244 --------MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
LC+ GR D ++L M + K + +++++ ++ + +A + ++M K
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPN--LVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P S I GFC+ + +AK+ + MI + +PNVV Y+ LI+ +C+ +RV +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
EL +EM+ G + T+ T++ G + + A ++V + M +G P Y+ L+
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA-QMVFKQMVSVGVH--PNILTYNILL 470
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
LC+ G A ++ + + PD T+N ++ + + W
Sbjct: 471 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 114/274 (41%), Gaps = 38/274 (13%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M + P++ ++ L+S+ + D + M+I GIS N TY+ LI C R
Sbjct: 69 MAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ L +L M K G + I NS+L G
Sbjct: 129 LSLALALLGKM--MKLGYEPDIVTLNSLLNG----------------------------- 157
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
FC + DA DQM+E G P+ V + LIH + EA L+ M G
Sbjct: 158 ----FCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+ V++GLC++G+ AL L+ + ++ YS +I +LC+
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV---IYSTVIDSLCKYRHED 270
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A L +M KG+ P+ +T++SL+ CL W
Sbjct: 271 DALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 129/478 (26%), Positives = 222/478 (46%), Gaps = 41/478 (8%)
Query: 26 MINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI-DLARAFYRKKMMASGVQGDDYTY 84
M+ + + ++RF + P + N+ L L K DL+ F+R M+ +G+ +TY
Sbjct: 197 MLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRD-MVGAGIAQSVFTY 255
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
I++ +C + L H MK G+ P+ V YN+LI K G + + L +M+
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD 315
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
EP+ +T++ LI +CK E + A L + + G P+VVT + +++ LC +
Sbjct: 316 VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQ 375
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A+ +FL +M R G PN TY LI + C+ G L AL + +
Sbjct: 376 AI-------------------KFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLAD 416
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
+M + +N VTY TL+ GLC GR+ + + + M K G + Y ++++G +
Sbjct: 417 EMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAM--IKAGVTPNLKTYTALVHGHIK 474
Query: 321 ENQQDEA--LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ + A L + +K+ P + I G C +E+ + +M G N VI
Sbjct: 475 NKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVI 534
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y + AY + + EA L++EM G TF ++ GLC++G LVEE +
Sbjct: 535 YTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKG-------LVEEAI 587
Query: 439 RGIGRGS----LPGS-GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
R + P + + LI LC+ ++A L +M K ++PD + + +L+
Sbjct: 588 DYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALI 645
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 216/466 (46%), Gaps = 36/466 (7%)
Query: 29 DVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
D+V A L + + +TP + +NS++D K + ++M G + D TY
Sbjct: 267 DMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYN 326
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
L+ C ++ F LH MK+ G+KPN V Y+TLI +LCK + +A + DM
Sbjct: 327 ALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRV 386
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN+ T++ LI A CK L +AL L ++ +VVT T +L+ LC GR+M+A
Sbjct: 387 GLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEA 446
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
++ + M + G PN+ TY L+ + + +++AL++ +
Sbjct: 447 EDL-------------------FRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKE 487
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
+K I + + Y T+I GLCS ++++ ++ M+ G + Y + ++
Sbjct: 488 IKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKAC--GIRANSVIYTIRMDAYFKT 545
Query: 322 NQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVP-NVVI 378
+ EAL L++M L + +L G C G VE+A F +M + P NV +
Sbjct: 546 GKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAV 605
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
LI C+ + A +L EM +P + ++ G + + AL + M
Sbjct: 606 CTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALN-IRSRM 664
Query: 439 RGIGRGSLPGSGH-YSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+G + H Y+ L+ L + Q A M L +M+GKGI+PD
Sbjct: 665 SELG---MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPD 707
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 221/491 (45%), Gaps = 33/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + ++I G G+ ++++ + + P + +N++++ K + + +AF
Sbjct: 285 PDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYE-QMPKAFH 343
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M SG++ + TY+ L+ LC + + K L M+ G+ PN Y +LI + C
Sbjct: 344 FLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANC 403
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A L +M + N VT++ L+ CKE ++ A L G P++
Sbjct: 404 KAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLK 463
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ G + + +V+ LKE++ K P++ Y +I
Sbjct: 464 TYTALVH-----GHIKNK--------------RVENALELLKEIKEKKIKPDLLLYGTII 504
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C L+ V ++MK GI N V Y + G+ + L +LQ M D G
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDL--G 562
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKIL-GFCVDGNVEDA 360
+ I + ++ GL ++ +EA++Y +M L P V ++ G C + +E A
Sbjct: 563 VEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAA 622
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K+ FD+M ++ VP+ + Y LI + + +EA + M+ G + +++ G
Sbjct: 623 KKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWG 682
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
L QGN+ ++ +M IG+G +P L++ E G A L +++ K
Sbjct: 683 L-SQGNLVQQARMFLNEM--IGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKKVP 739
Query: 481 LPDYLTWNSLL 491
L + L +L+
Sbjct: 740 LDELLEEQNLM 750
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 9/281 (3%)
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
LG ++ + M R P + N + +TG D + F DM GI+ + T
Sbjct: 195 LGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFT 254
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y+ +I +C G + + M+ + G I YNS++ G + DE+ ++
Sbjct: 255 YNIMIGYMCKEGDMVTAKSLFHQMK--QMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEE 312
Query: 334 MEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M+ + P + + I FC + A +M G PNVV Y LI A C+E
Sbjct: 313 MKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHM 372
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSG 450
+++A + + +M G P T+ +++ C+ G + ALKL +E ++ +G +
Sbjct: 373 LQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVT--- 429
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ L+ LC++G A L M+ G+ P+ T+ +L+
Sbjct: 430 -YTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALV 469
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 126/265 (47%), Gaps = 7/265 (2%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R C+P ++ L S + E G+L+ A F+ M + + + + L G+ D
Sbjct: 175 RNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGD 234
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
K + M + G + YN ++ + +E A QM++ L P V +
Sbjct: 235 LSNKFFRDMVGA--GIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNS 292
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+ G ++++ F++M + G P+V+ Y+ LI+ +C+ E++ +A + EM G
Sbjct: 293 LIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSG 352
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T++T++ LC++ + A+K + DMR +G P Y+ LI A C+ G
Sbjct: 353 LKPNVVTYSTLIDALCKEHMLQQAIKFL-LDMRRVGLS--PNEFTYTSLIDANCKAGYLS 409
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A L +M+ + + +T+ +LL
Sbjct: 410 DALKLADEMLQVQVGFNVVTYTTLL 434
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 19/231 (8%)
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +E+A +CF +M P + ++ + + +++ ++M G G T+
Sbjct: 196 GMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTY 255
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N ++ +C++G++ TA L + M+ +G P Y+ LI + G + L +
Sbjct: 256 NIMIGYMCKEGDMVTAKSLFHQ-MKQMGLT--PDIVTYNSLIDGYGKLGLLDESFCLFEE 312
Query: 475 MVGKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEMVSFVM---VVHELSAKEKRCKLRS 530
M G PD +T+N+L+ C + + L+EM + + VV + + CK
Sbjct: 313 MKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCK--- 369
Query: 531 LNHLAHGAGSVWL-----GLRIHDTTHTFIIDRRVEIGHVFCSSSSLKDVD 576
H+ A L GL ++ T+T +ID + G++ S +LK D
Sbjct: 370 -EHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYL---SDALKLAD 416
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 186/409 (45%), Gaps = 28/409 (6%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSI 152
VG + M+ RGV P+SV Y + + C+ G++ + DM ++ T ++
Sbjct: 212 VGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTL 271
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
+I +C++ +K G P+++ T ++ LC G + A E+LEE ++G
Sbjct: 272 MISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKG 331
Query: 213 -------RLGKVKGGCR----------FLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
+ G C+ FLK + PNV TY +I YC+ L+ A
Sbjct: 332 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRA 391
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ + MK G+ N TY LI G G + +++ LM KEG I YN+ +
Sbjct: 392 EMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLM--GKEGFSANIFTYNAFI 449
Query: 316 YGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
L ++ + EA + LK+ +L +A V ++ I C + +A F +M + G
Sbjct: 450 DSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQ 509
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P++ Y+ LI A+ ++ R+ E+ +L E G G +P T+ +++ G CR NV ALK
Sbjct: 510 PDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKF 569
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R G P S Y LI LC++ A L MV KG+ P
Sbjct: 570 FN---RMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSP 615
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 199/459 (43%), Gaps = 48/459 (10%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+Y K + G++ + + L+ GLC + F++L M +G KPN + LI L
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGL 346
Query: 127 CKNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK G +A L SD +PN T++ +I YCKE+ L A +LL + G VP+
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T T +++ G A E+++ G++G N+ TYN
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSA-------------------NIFTYNA 447
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
I S C+ G A + G+ + VTY LI LC + L M K
Sbjct: 448 FIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKM--FK 505
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL---------KILGFC 352
G + + YN+++ R+ + +E+ EKLF AV L I G+C
Sbjct: 506 AGVQPDMHTYNTLIAAFSRQRRMEES-------EKLFAEAVGLGLVPTKETYTSMICGYC 558
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
D NV A + F++M + G P+ + Y LI C+E ++ EA +L + M G P
Sbjct: 559 RDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEV 618
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T T+ C+Q + TA+ ++E + + ++ + LI+ LC + A +
Sbjct: 619 TRLTLAYEYCKQDDSATAMVILERLDKKLWIRTV------NTLIRKLCSERKVGMAVLFF 672
Query: 473 VQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
+++ K D +T + + + L+ L+E +S
Sbjct: 673 HKLLDKDQNVDRVTLTAFTTACYESNKYALVSDLSERIS 711
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 142/288 (49%), Gaps = 8/288 (2%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R+G++ R+LK+M R+G + + T ++IS++CE G F+ G+ N +
Sbjct: 243 RMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLI 302
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE-YL 331
+ +LI GLC G I ++L+ M K+G K + + +++ GL ++ ++A +L
Sbjct: 303 NFTSLINGLCKRGSIKQAFEMLEEM--VKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 360
Query: 332 K--QMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
K + + P + I G+C + + A+ +M E+G VPN Y CLI + +
Sbjct: 361 KLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKA 420
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+A ELM M G+ T+N + LC++G A KL++ +G G +
Sbjct: 421 GNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK---KGFRLGLQADT 477
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI LC + + A + +M G+ PD T+N+L+ S+Q
Sbjct: 478 VTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQ 525
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 39/316 (12%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+GK + + EME G + V T N + E G++ A +VF++M++ G+ +
Sbjct: 172 AEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDS 231
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLM-----------------EDSKEGSKGRISPY--- 311
V+Y + C GRI D + L+ M ++G R+ Y
Sbjct: 232 VSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDK 291
Query: 312 -------------NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
S++ GL + +A E L++M K P + I G C G
Sbjct: 292 WVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGW 351
Query: 357 VEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
E A R F +++ PNV Y +IH YC+E+++ A L+ M G +P T+
Sbjct: 352 TEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYT 411
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ G + GN A +L+ D+ G G Y+ I +LC+KG F A LL +
Sbjct: 412 CLIDGHSKAGNFEKAYELM--DLMG-KEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKG 468
Query: 476 VGKGILPDYLTWNSLL 491
G+ D +T+ L+
Sbjct: 469 FRLGLQADTVTYTILI 484
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 31/315 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I G +A + DL+ + + ++ +N+ +D L K+ L
Sbjct: 405 PNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKL 464
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KK G+Q D TY IL+ LC + M GV+P+ YNTLI + +
Sbjct: 465 LKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSR 524
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
++ + L ++ P T++ +IC YC++ N+ AL + G PD +T
Sbjct: 525 QRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLT 584
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC ++ +A C+ + M KG P T L
Sbjct: 585 YGALISGLCKESKLDEA-------------------CQLYEAMVDKGLSPCEVTRLTLAY 625
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL---QLMEDSK 301
YC+ DSA + ++D W T +TLIR LCS ++ G+ +L +L++ +
Sbjct: 626 EYCKQD--DSATAMVILERLDKKLW-IRTVNTLIRKLCSERKV--GMAVLFFHKLLDKDQ 680
Query: 302 EGSKGRISPYNSVLY 316
+ ++ + + Y
Sbjct: 681 NVDRVTLTAFTTACY 695
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 20/191 (10%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+ DC++ + + + +EA ++ EM HG + T N V G VG A + +E
Sbjct: 163 VMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDE- 221
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
MR RG P S Y + A C G L MV +G + D T ++ ++
Sbjct: 222 MR--VRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEK 279
Query: 498 ----------TTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGS-VWLGLR 546
W+ L L +++F +++ L CK S+ V G +
Sbjct: 280 GFASRVFWYFDKWVELGLKPNLINFTSLINGL------CKRGSIKQAFEMLEEMVKKGWK 333
Query: 547 IHDTTHTFIID 557
+ THT +ID
Sbjct: 334 PNVYTHTALID 344
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/462 (25%), Positives = 204/462 (44%), Gaps = 51/462 (11%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G ++G +++++M + G PN ++N+L+HS C A L++ M
Sbjct: 313 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 372
Query: 143 E----EPNDVTFSILICAYCKEENLVNA--LVLLEKSF----SFGFVPDVVTITKVLELL 192
P V ++I I + C +E L + L L EK + + V + V + L
Sbjct: 373 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 432
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
C VG+ A ++++E +G KV+ +EM+ G P+V
Sbjct: 433 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY ILI S+C+ G+++ A +F +M+ G S VTY LI ++ I
Sbjct: 493 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 552
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------------------EKLF 338
M D+ G + Y +++ GL + +A E ++ L
Sbjct: 553 MVDA--GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 610
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + G C V+ A D M+ G PN ++YD LI +C+ ++ A E+
Sbjct: 611 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 670
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+MT GYLP T+ +++ + + G + A+K++ + ++ P Y+ +I
Sbjct: 671 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD---SCTPNVVTYTAMIDG 727
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
LC G + A LL M KG P+ +T+ +L+ L Q +W
Sbjct: 728 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQ--SW 767
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 147/320 (45%), Gaps = 11/320 (3%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+MM G D TY+ ++ LC +V F L MK GV P+ Y LI S CK
Sbjct: 446 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 505
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +A+ L +M P VT++ LI AY K + + A + + G P+ VT
Sbjct: 506 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 565
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ LC G + A E+ + G F E +R PNV TY L+
Sbjct: 566 GALVDGLCKAGNISKAFEVYAKL--IGTSDSADSDFYFPCE-DRHTLAPNVVTYGALVDG 622
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ +D A ++ + M G N + YD LI G C G+ID ++ M +K G
Sbjct: 623 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM--TKCGYL 680
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y S++ ++++ + D A++ L QM K P V + I G C G E A +
Sbjct: 681 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 740
Query: 364 FDQMIEEGGVPNVVIYDCLI 383
M E+G PNVV Y LI
Sbjct: 741 LSLMEEKGCSPNVVTYTALI 760
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 190/488 (38%), Gaps = 93/488 (19%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP 145
+L++ C + + L +K G +P+ V YN L+ L G+V + +M E
Sbjct: 179 VLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES 238
Query: 146 ----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+ T A CKE +AL ++E+ F D V T ++ L +A
Sbjct: 239 GFCMDRFTVGCFAHALCKEGRWADALDMIERE---DFKLDTVLCTHMISGLMEASYFDEA 295
Query: 202 VEILEE-----------------SG--EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+ L SG ++ +LG K R + M +GC PN +N L
Sbjct: 296 MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK---RIINMMMTEGCNPNPSLFNSL 352
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI------------------------ 278
+ SYC A + N M G +V Y+ I
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 412
Query: 279 -----------------RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
R LC G+ D ++++ M ++G S Y+ V+ L
Sbjct: 413 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEM--MRKGFVPDTSTYSKVITFLCHA 470
Query: 322 NQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ ++A ++M+ + P ++ I FC G +E A+ F++M G P VV Y
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 530
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
LIHAY + ++V +A+++ M G P T+ ++ GLC+ GN+ A ++ +
Sbjct: 531 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA---K 587
Query: 440 GIGRGSLPGSGHYSP----------------LIKALCEKGGFQSASMLLVQMVGKGILPD 483
IG S Y P L+ LC+ A LL M+ G P+
Sbjct: 588 LIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPN 647
Query: 484 YLTWNSLL 491
++ +++L+
Sbjct: 648 HIVYDALI 655
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 138/335 (41%), Gaps = 41/335 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD S + VI L A + + +TP + + ++D K + +
Sbjct: 455 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 514
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M + G TY L+ +V + H M G +PN V Y L+ LCK
Sbjct: 515 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 574
Query: 129 NGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNALV 168
G + +A + + + PN VT+ L+ CK + +A
Sbjct: 575 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 634
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
LL+ S G P+ + +++ C G++ A E+ FL +M
Sbjct: 635 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV------------------FL-QMT 675
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G LP+V TY LI + G LD A+ V + M D + N VTY +I GLC G +
Sbjct: 676 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 735
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
LK+L LME+ +G + Y +++ GL + Q
Sbjct: 736 KALKLLSLMEE--KGCSPNVVTYTALIDGLGQSWQ 768
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 176/440 (40%), Gaps = 84/440 (19%)
Query: 196 GRVMDAVEILEESGEQGR--LGK-----VKGGCR------FLKEMERK---GCLPNVDTY 239
GR DA +L E GE+ R LG+ V+ CR L+E+ R G P+ TY
Sbjct: 153 GRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTY 212
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N L+ G +D V +M G + T LC GR D L +++
Sbjct: 213 NALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---- 268
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNV 357
+E K ++ GL + DEA+ +L +M P V + GF +
Sbjct: 269 -REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQL 327
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
KR + M+ EG PN +++ L+H+YC E+ A +L+ MT G P +N
Sbjct: 328 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 387
Query: 418 LSGLCRQ-----------------------------------------GNVGTALKLVEE 436
+ +C Q G A +L++E
Sbjct: 388 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKE 447
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC- 493
MR +G +P + YS +I LC + A +L +M G+ PD T+ L+ C
Sbjct: 448 MMR---KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 504
Query: 494 --LSQQTTWLLLLLLN-----EMVSFVMVVHE-LSAKEKRCKLRSLNHLAHGAGSVWLGL 545
L +Q WL + + +V++ ++H L AK+ + N + H V G
Sbjct: 505 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ----VPQANDIFHRM--VDAGC 558
Query: 546 RIHDTTHTFIIDRRVEIGHV 565
R +D T+ ++D + G++
Sbjct: 559 RPNDVTYGALVDGLCKAGNI 578
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 174/414 (42%), Gaps = 30/414 (7%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-EEPNDVT---FSILICAYC 158
L + G Y+ L +L +G+ A L+ ++ EE +V ++L+ C
Sbjct: 126 FLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCC 185
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR-LGKV 217
+ AL L + FG+ P VT ++++L S G+V + +E E G + +
Sbjct: 186 RGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRF 245
Query: 218 KGGC---------RF---LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
GC R+ L +ER+ + +IS E D A+ + M+ +
Sbjct: 246 TVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCN 305
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
N VTY TL+ G ++ +I+ +M EG S +NS+++ E
Sbjct: 306 SCIPNVVTYRTLLSGFLKKKQLGWCKRIINMM--MTEGCNPNPSLFNSLVHSYCNEKDYA 363
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED------AKRCFDQMIEEGGVPNVV 377
A + L +M P V ++ I C + A++ + +M+ V N V
Sbjct: 364 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 423
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
C + +A +L+KEM G++P ST++ V++ LC V A L +E
Sbjct: 424 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQE- 482
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
M+ + G P Y+ LI + C+ G + A L +M G P +T+ +L+
Sbjct: 483 MKMV--GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALI 534
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 193/400 (48%), Gaps = 33/400 (8%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E IF+++ RG GR D ++ + F + P+ K + +ILD+LV+E+ + A FYR
Sbjct: 85 EDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYR 144
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGD-GFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G+ + IL+K LC D ++ M +RG +P+S Y TLI+ LC+
Sbjct: 145 -EMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCR 203
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A+ L +ME+ + VT++ LI C+ NL A+ LLE+ P+V T
Sbjct: 204 LGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFT 263
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +++ LC G A+++LE M++K LPN+ TY+ LI+
Sbjct: 264 YSSLMDGLCKGGHSSQAMQLLE-------------------VMDKKHHLPNMVTYSTLIN 304
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM-----ED 299
C+ L A+++ + M+I G+ N Y +I GLC+ G + + M
Sbjct: 305 GLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISP 364
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALE-YLKQMEKLFPRAVDR-SLKILGFCVDGNV 357
++ + +N V+ GL A + YL + +D + FC G++
Sbjct: 365 NRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDL 424
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
A R ++M+ +G +P+ +++ +I ++VREA+E
Sbjct: 425 HKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATE 464
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 193/405 (47%), Gaps = 39/405 (9%)
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---P 145
+G +R D ++ H M+ ++P Y T++ L + V RA +M E P
Sbjct: 93 RGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIP 152
Query: 146 NDV-TFSILICAYCKEENLVN-ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+ V + +ILI A CK + V+ AL + ++ + G PD T ++ LC +G + +A E
Sbjct: 153 SSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKE 212
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ KEME+KG +V TY LI C++ LD A+ + +MK
Sbjct: 213 LF-------------------KEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMK 253
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ I N TY +L+ GLC GG +++L++M+ K+ + Y++++ GL +E +
Sbjct: 254 RNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMD--KKHHLPNMVTYSTLINGLCKERK 311
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN------ 375
EA+E L +M + L P A I G C G+ ++A D+M+ G PN
Sbjct: 312 LREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSL 371
Query: 376 -VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
V +++ ++ C A +L M TF+ ++ C++G++ A +++
Sbjct: 372 HVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARIL 431
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS-MLLVQMVGK 478
EE + G +P G ++ +I L ++ + A+ LLV++ K
Sbjct: 432 EE---MVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVELQQK 473
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 203/466 (43%), Gaps = 48/466 (10%)
Query: 47 KIFNSILDVLVKEDIDLARAF----YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
+I NS++ L+K + D+ +A +G + D T+ +++ L N+
Sbjct: 12 QITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEG 71
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKN-GKVGR---ARSLMSDME----EPNDVTFSILI 154
+L MK + ++ + S+C+ G+V R A + ME P + ++
Sbjct: 72 MLERMK----QEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTIL 127
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
+E ++ A+ + G VV++ +++ LC +D+
Sbjct: 128 DILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDS------------- 174
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
R +EM +GC P+ TY LI+ C G + A ++F +M+ G S + VTY
Sbjct: 175 -----ALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTY 229
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+LI GLC +D+ + + L E + + + Y+S++ GL + +A++ L+ M
Sbjct: 230 TSLIHGLCQSNNLDEAIGL--LEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVM 287
Query: 335 EKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+K P V S I G C + + +A D+M +G PN +Y +I C
Sbjct: 288 DKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSY 347
Query: 393 REASELMKEMTGHGYLPIASTF-------NTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+EA+ + EM G P +++ N V+ GLC + A +L MR R
Sbjct: 348 QEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYL-SMRT--RCI 404
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ L+K C++G A+ +L +MV G +PD WN ++
Sbjct: 405 SVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVI 450
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 166/366 (45%), Gaps = 27/366 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKS---FSFGFVPDVVTITKVLELLCSVGRVMDA 201
P +T S+++ E+++ A+ + + + + GF D T ++ L +V + A
Sbjct: 10 PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69
Query: 202 VEILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+LE ++ GR+ + R +ME P Y ++
Sbjct: 70 EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR-IDDGLKILQLMEDSKEGS 304
E + A+ + +M+ GI + V+ + LI+ LC +D L+I Q M + G
Sbjct: 130 LVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPN--RGC 187
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y +++ GL R EA E K+ME+ V + I G C N+++A
Sbjct: 188 QPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIG 247
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
++M PNV Y L+ C+ +A +L++ M +LP T++T+++GLC
Sbjct: 248 LLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLC 307
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
++ + A+++++ R +G P +G Y +I LC G +Q A+ + +MV GI P
Sbjct: 308 KERKLREAVEILD---RMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISP 364
Query: 483 DYLTWN 488
+ +W+
Sbjct: 365 NRASWS 370
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 4/139 (2%)
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
DA R F +M P Y ++ +E V+ A +EM G + N ++
Sbjct: 103 DAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILI 162
Query: 419 SGLCR-QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
LC+ + V +AL++ +E RG P S Y LI LC G A L +M
Sbjct: 163 KALCKNKETVDSALRIFQE---MPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQ 219
Query: 478 KGILPDYLTWNSLLICLSQ 496
KG +T+ SL+ L Q
Sbjct: 220 KGFSASVVTYTSLIHGLCQ 238
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 212/481 (44%), Gaps = 83/481 (17%)
Query: 10 DESIFITVIRGLGRARMIN----------------DVVKATDLVSRFNMTPSLKIFNSIL 53
+E + +I LGR+R +N + +K + ++PS+ FNS+L
Sbjct: 219 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLL 278
Query: 54 DVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV 112
+++K +A+ + + + GV D YT+ IL++G C+ + V +GF M
Sbjct: 279 SIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKC 338
Query: 113 KPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNA 166
P+ V YNTL+ LC+ GKV A +++ M + PN VT++ LI YC ++++ A
Sbjct: 339 DPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEA 398
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L LL + S G P+ +T +++ LC ++ EILE G V G
Sbjct: 399 LSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILE--------GMVGDG------ 444
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
G +P+ T N LI ++C G L+ A VF M + + TY L+R LC G
Sbjct: 445 ----GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGD 500
Query: 287 IDDGLKILQLMEDSK-----EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
+ + + + G K ++ YN + EYL
Sbjct: 501 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPM-------------FEYL---------- 537
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
C +G + A+R F Q+++ G + Y LI +C+E +L+
Sbjct: 538 ----------CSNGKTKKAERVFRQLMKR-GTQDPPSYKTLILGHCREGTPEAGFDLLVL 586
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
M ++P A T+ ++ GL ++G+ A K +E+ ++ LP + + ++ AL E
Sbjct: 587 MLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKS---SHLPTTAIFHSILAALVE 643
Query: 462 K 462
K
Sbjct: 644 K 644
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/499 (24%), Positives = 198/499 (39%), Gaps = 87/499 (17%)
Query: 19 RGLGRARMINDVVKATDLVSRF-NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGV 77
R AR+IN + +L S + PSL + + + A F+R + A G
Sbjct: 158 RSQAMARLINTEPWSHELQSSLAELAPSLSKTTVLQTLQLIRTPAKALHFFRW-VEAKGF 216
Query: 78 QGDDYTYAILMKGLCLTNRV----------------GDGFKLLHVMKSRGVKPNSVIYNT 121
++ +Y ++++ L + + + K+ MK GV P+ V +N+
Sbjct: 217 THNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNS 276
Query: 122 LIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
L+ + K G+ A+ L +M + ++G PD
Sbjct: 277 LLSIVLKRGRTSMAKQLFDEMLD------------------------------TYGVTPD 306
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T ++ C M+++ V G F KEM R C P+V TYN
Sbjct: 307 TYTFNILIRGFC-----MNSM--------------VDEGFWFFKEMSRFKCDPDVVTYNT 347
Query: 242 LISSYCETGVLDSALDVFNDM--KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ C G + A +V M K +S N VTY TLIRG C + + L +L M
Sbjct: 348 LVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEM-- 405
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGN 356
G K YN+++ GL + D+ E L+ M P + I C G
Sbjct: 406 VSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGK 465
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH-------GYLP 409
+E+A F++M E P+ Y L+ + CQ R A E E+ G P
Sbjct: 466 LEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKP 525
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSA 468
+ + +N + LC G A ++ + M+ RG+ P S Y LI C +G ++
Sbjct: 526 LVAAYNPMFEYLCSNGKTKKAERVFRQLMK---RGTQDPPS--YKTLILGHCREGTPEAG 580
Query: 469 SMLLVQMVGKGILPDYLTW 487
LLV M+ + +PD T+
Sbjct: 581 FDLLVLMLRRDFVPDAETY 599
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 159/393 (40%), Gaps = 61/393 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD F +IRG M+++ +SRF P + +N+++D L VK ++
Sbjct: 305 PDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNV 364
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ +K + + + TY L++G C+ + + LL M SRG+KPN + YNTLI
Sbjct: 365 VKGMVKK---SPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLI 421
Query: 124 HSLCKNGKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
LC+ K+ + + ++ M P+ T + LI A+C L A + EK
Sbjct: 422 QGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRV 481
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
PD T + ++ LC G A E +E E+ L + GC P V
Sbjct: 482 QPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL------------LHDVGCKPLVAA 529
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN + C G A VF + G + + +Y TLI G C G + G +L LM
Sbjct: 530 YNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLM- 587
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
L R+ P A L I G G+
Sbjct: 588 -------------------LRRD---------------FVPDAETYGLMIDGLLKKGDPV 613
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
A + ++M++ +P I+ ++ A ++ER
Sbjct: 614 LAHKSLEKMLKSSHLPTTAIFHSILAALVEKER 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 133/295 (45%), Gaps = 23/295 (7%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSA----------------LDVFNDMKIDG 266
F + +E KG N +Y ++I + L++A + VF MK G
Sbjct: 207 FFRWVEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIKVFKTMKEIG 266
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+S + VT+++L+ + GR ++ M D+ G +N ++ G + DE
Sbjct: 267 VSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY-GVTPDTYTFNILIRGFCMNSMVDE 325
Query: 327 ALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCL 382
+ K+M + P V + + G C G V+ A M+++ PNVV Y L
Sbjct: 326 GFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTL 385
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
I YC ++ + EA L+ EM G P T+NT++ GLC + +K + E M G G
Sbjct: 386 IRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLD-KIKEILEGMVGDG 444
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G +P + + LIKA C G + A + +M + PD T++ L+ L Q+
Sbjct: 445 -GFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQR 498
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 204/460 (44%), Gaps = 30/460 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + + G RA M+ + L+ + + ++L L+ +
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M A D + YA ++ GLC R + LL S G +PN V+YN LI C
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A + M+ PN T++ LI CK + A+VL + G P+VVT
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C+ G + A R L ME G +PN T+++LI
Sbjct: 285 YTALIQGQCNEGHLQCAF-------------------RLLHLMETNGLVPNDWTFSVLID 325
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ ++ A + G+ N V Y +LI GLC G+ID +++Q M EG
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM--ISEGF 383
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y+S++ GL R+ + +A L+ M + + V ++ I + E K+
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD+MI G P++V Y + +YC+E R+ +A ++ +M G P T+NT++ G
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G V A E +G+G P Y+ L++ + +K
Sbjct: 504 NLGLVSQAFSTFE---VMVGKGWKPNEDSYTVLLRLVVKK 540
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 232/502 (46%), Gaps = 40/502 (7%)
Query: 1 MPHSIQSP----PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL 56
+ H + SP P T++ L R RM D+ L SR +L+ + ++++
Sbjct: 27 LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDM---ESLASRMPAR-NLRTYTTLINAY 82
Query: 57 -VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
+ DI A+ + ++ +G+ D Y Y + G C + ++ +M RG
Sbjct: 83 CLAGDIPAAKQ-HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRT 141
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLE 171
+ Y L+H L G V A ++ M P+ ++ ++ C+ A VLLE
Sbjct: 142 AFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLE 201
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
++ S GF P++V +++ C+ G + A+ + + M+
Sbjct: 202 EAMSNGFEPNIVVYNALIDGYCNAGEMEHAL-------------------KVFEGMDGNR 242
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PNV TY LI C++G ++ A+ +F+ M G+ N VTY LI+G C+ G +
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++L LME + G ++ ++ L + + +EA +L + K + V + I
Sbjct: 303 RLLHLMETN--GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C G ++ A +MI EG VP+ Y LI C+++++ +A+ ++++M G
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ L R+ K+ + + I G P Y+ +++ CE+G + A
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFD---KMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
++VQMV +G+ P+ +T+N+L+
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLI 499
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 182/412 (44%), Gaps = 36/412 (8%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
NTL+ +L ++ SL S M N T++ LI AYC ++ A L G
Sbjct: 45 NTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLA 104
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T + C R G + CR M +GCL TY
Sbjct: 105 PDSYAYTSFVLGYC-------------------RAGMLTHACRVFVLMPLRGCLRTAFTY 145
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ G++ A+ VF M+ D + + Y T++ GLC GR + + L E
Sbjct: 146 TALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE--EAEVLLEEA 203
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNV 357
G + I YN+++ G + + AL+ + M+ + P + I G C G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A F +M+E G PNVV Y LI C E ++ A L+ M +G +P TF+ +
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ LC++ V A + ++ +G Y+ LI LC+ G +A L+ +M+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVK---KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380
Query: 478 KGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM--------VSFVMVVHEL 519
+G +PD +++SL+ +C ++ + L+L + M V++ +++ EL
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 199/433 (45%), Gaps = 55/433 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ ++ +I G A + +K + + +P+++ + ++ L K ++ A
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ +G++ + TY L++G C + F+LLH+M++ G+ PN ++ LI +LC
Sbjct: 270 F-SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328
Query: 128 KNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K KV A+ SL+ + N+V ++ LI CK + A L++K S GFVPD
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ + +++ LC ++ A +LE+ E+G R +G + +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P++ TY + + SYCE G ++ A + M G+ N VTY+TLIRG + G +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
++M +G K Y +L + +++ D +++ K
Sbjct: 509 SQAFSTFEVM--VGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK--------------- 551
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ D K + +E +++ LI+ Q+ V E S L+ M HGY
Sbjct: 552 ---------IADMKDLQESNYDE------IVWKILIYGLLQKGSVAEFSSLLSVMKEHGY 596
Query: 408 LPIASTFNTVLSG 420
P ++T N +++G
Sbjct: 597 QP-SNTINAMITG 608
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 224/495 (45%), Gaps = 70/495 (14%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ T+I LGRA+M ++ S+L + + ++ R+ +M
Sbjct: 219 YFTMIDILGRAKMFTEL-------------------QSLLQKMQTQGREITRSMLHSFVM 259
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN--SVIYNTLIHSLCKNGK 131
+ G G R + + ++MK G +P YN+++ SL KN K
Sbjct: 260 SYGRSG----------------RFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKK 303
Query: 132 VGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A +L + M N++T++ +I + +E + +A+ LL+ + PDVVT T
Sbjct: 304 LDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTI 363
Query: 188 VLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCRFLKE---------MERKG 231
V+ LC + A +L++ E G ++G C + ME+ G
Sbjct: 364 VISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGG 423
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PN+ TY IL C+ LD A ++FN+ G+ N VTY+TL+ G C G R+ + +
Sbjct: 424 VPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAM 483
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL-- 349
IL+ M + + + ++ Y +++ GL + NQ +AL +ME +L IL
Sbjct: 484 DILKEMHQN-DCTPDHVT-YTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILAR 541
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G GN +DA + +M + G + Y IH + EA L+ EM GY P
Sbjct: 542 GLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSP 601
Query: 410 IASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+T+NT++ G CRQG + A L + E+ GIG P +G Y+ LIK +G Q
Sbjct: 602 NLTTYNTMIKGFCRQGRLDDADAMLNFMIEN--GIG----PDTGSYNILIKEFHNQGRTQ 655
Query: 467 SASMLLVQMVGKGIL 481
A L + +G++
Sbjct: 656 DADQLYATALERGVV 670
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 129/332 (38%), Gaps = 49/332 (14%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPN-VDT-YNILISSYCETGVLDSALDVFNDMKIDGISW 269
GR G+ K M+ G P +DT YN ++ S + LD A ++F M +G+S
Sbjct: 262 GRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSC 321
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N +TY ++I+ +++D +K+L M +
Sbjct: 322 NNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYA-------------------------- 355
Query: 330 YLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
P V ++ I C +E A +M E G PN+ Y+ LI C
Sbjct: 356 ---------PDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAV 406
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R EA EL+ M G P T+ + GLC+ + A ++ E + RG P
Sbjct: 407 RRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNE---ALARGLKPNR 463
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEM 509
Y+ L+ C A +L +M PD++T+ +L+ L Q N++
Sbjct: 464 VTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQG---------NQL 514
Query: 510 VSFVMVVHELSAKEKRCKLRSLNHLAHGAGSV 541
+ + E+ K +LN LA G V
Sbjct: 515 PDALRMHDEMENKGYDVNFDTLNILARGLARV 546
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 76/181 (41%), Gaps = 4/181 (2%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
H PD + T+I+GL + + D ++ D + + N + L +
Sbjct: 490 HQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNH 549
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ + ++M G Y + + L + + LL+ M ++G PN YNT+
Sbjct: 550 KDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTM 609
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I C+ G++ A ++++ M E P+ +++ILI + + +A L + G
Sbjct: 610 IKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGV 669
Query: 179 V 179
V
Sbjct: 670 V 670
>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
Length = 810
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 231/496 (46%), Gaps = 42/496 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP++ F +I L + + + + D +S+ T + ++N I+ L E + A
Sbjct: 235 PPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLA-ELGRVEEAL 293
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M + D ++Y +MKGLC R D L+ M + P+ V +NT+I LC
Sbjct: 294 HLFDQMP--CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLC 351
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G V A ++ M + P++ T+S L+ A + + +AL LL + + P+ V
Sbjct: 352 HRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLR---TIPWKPNTV 408
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
VL+ LC R D +GK+ + EM R + T+ ++I
Sbjct: 409 CYRSVLKGLCRADRWDD-------------VGKL------VAEMIRNQLNLDEVTFGLII 449
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G++D +V +M G S + + Y++LI G G +DD L++ + M
Sbjct: 450 DCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM-----S 504
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
K + YN +L GL R Q ++A + + +M ++ P V S I C G VE A
Sbjct: 505 CKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAI 564
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F++M + +PNV+IY LI+ +E V +A +L+ +M P ++ L GL
Sbjct: 565 EVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCK---PDTICYSAALKGL 621
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
CR A +L+ E +R + LP +S LI LC KG +SA+ + M+ +
Sbjct: 622 CRAERWEDAGELILEMIR---KNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECM 678
Query: 482 PDYLTWNSLLICLSQQ 497
P+ ++SL+ ++Q
Sbjct: 679 PNVFIYSSLINGFAEQ 694
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 230/509 (45%), Gaps = 35/509 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + TV++GL R D + R + P FN+++ L +
Sbjct: 303 PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEV 362
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M G + D++TY+ L+ L V D +LL + KPN+V Y +++ LC+
Sbjct: 363 VEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIP---WKPNTVCYRSVLKGLCR 419
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ L+++M ++VTF ++I C++ + +L + FG PD++
Sbjct: 420 ADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIII 479
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGK----VKGGCR---------FLKEMERKG 231
++ G V DA+E+ + + + +KG CR + EM +
Sbjct: 480 YNSLINGFSENGSVDDALELFKNMSCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDE 539
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
CLPN T++ LIS C+ G ++ A++VF M N + Y TLI GL +DD L
Sbjct: 540 CLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDAL 599
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K+L M K Y++ L GL R + ++A E + +M + P V S+ I
Sbjct: 600 KLLNDMP-----CKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILIN 654
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
C G +E A + M++ +PNV IY LI+ + ++ R +A +L++ M P
Sbjct: 655 NLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNMPCE---P 711
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP-GSGHYSPLIKALCEKGGFQSA 468
++ L GLCR A +L+ E + R P +S LI +LC+ G A
Sbjct: 712 DTICYSAALKGLCRAKRWEDARELIAE----MFRKQCPLDEATFSMLIGSLCQNGLVDMA 767
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ + QM G P+ +SL+ S+Q
Sbjct: 768 TEVFEQMSVYGCSPNRKIHSSLVNGYSEQ 796
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 219/463 (47%), Gaps = 37/463 (7%)
Query: 70 KKMMAS---GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++M+AS D TY L+ G C R+ D +L+ M PNS +TL+ L
Sbjct: 157 ERMLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGL 213
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C N + A L+S+M PND+TF ++I + C+ A+ +L++ V
Sbjct: 214 CSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGV 273
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGK----VKGGCR---------FLKEMER 229
+ +++ L +GRV +A+ + ++ + + +KG CR + M R
Sbjct: 274 IVYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVR 333
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K C P+ T+N +IS C G++D A++V M G + TY L+ L G +DD
Sbjct: 334 KDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDD 393
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
L++L+ + K Y SVL GL R ++ D+ + + +M +L V L
Sbjct: 394 ALELLRTIP-----WKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLI 448
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I C G V+ +M + G P+++IY+ LI+ + + V +A EL K M+
Sbjct: 449 IDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRN 508
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+ T+N +L GLCR A KLV E ++ LP +S LI LC+KG +
Sbjct: 509 V---VTYNYMLKGLCRAEQWEDAGKLVAEMVKD---ECLPNEVTFSTLISYLCQKGFVEC 562
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLS-QQTTWLLLLLLNEM 509
A + +M +P+ + +++L+ LS Q+ L LLN+M
Sbjct: 563 AIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM 605
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/483 (25%), Positives = 202/483 (41%), Gaps = 102/483 (21%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+ YT + L+KGLC D +LL M G PN + + +IHSLC+NG RA ++
Sbjct: 202 NSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVL 261
Query: 140 SDMEE------------------------------------PNDVTFSILICAYCKEENL 163
M + P+ +++ ++ C++
Sbjct: 262 DQMSKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRW 321
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
+A L+ PD VT V+ LC G V A+E++E+
Sbjct: 322 EDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQ---------------- 365
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW--NFVTYDTLIRGL 281
M + GC P+ TY+ L+++ E G +D AL++ I W N V Y ++++GL
Sbjct: 366 ---MPKYGCKPDNFTYSALVNALSERGCVDDALELLRT-----IPWKPNTVCYRSVLKGL 417
Query: 282 CSGGRIDDGLKILQLM---------------------------------EDSKEGSKGRI 308
C R DD K++ M E +K G I
Sbjct: 418 CRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDI 477
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YNS++ G D+ALE K M V + + G C EDA + +M+
Sbjct: 478 IIYNSLINGFSENGSVDDALELFKNM-SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMV 536
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
++ +PN V + LI CQ+ V A E+ ++M + +P ++T+++GL Q V
Sbjct: 537 KDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVD 596
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
ALKL+ DM P + YS +K LC ++ A L+++M+ K LPD +T++
Sbjct: 597 DALKLLN-DM-----PCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFS 650
Query: 489 SLL 491
L+
Sbjct: 651 ILI 653
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 194/419 (46%), Gaps = 27/419 (6%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
+I P+ + +V++GL RA +DV K + R + F I+D L ++ +
Sbjct: 399 RTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLV 458
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
A ++M G D Y L+ G V D +L K+ K N V YN +
Sbjct: 459 DYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELF---KNMSCKRNVVTYNYM 515
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ LC+ + A L+++M + PN+VTFS LI C++ + A+ + EK +
Sbjct: 516 LKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNC 575
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----GKVKGGCR---------FLK 225
+P+V+ + ++ L V DA+++L + + +KG CR +
Sbjct: 576 MPNVIIYSTLINGLSDQECVDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGELIL 635
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM RK CLP+ T++ILI++ C G L+SA +V M N Y +LI G
Sbjct: 636 EMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQY 695
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFP-RAVD 343
R +D L++L+ M + Y++ L GL R + ++A E + +M K P
Sbjct: 696 RAEDALQLLRNMPCEPD-----TICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEAT 750
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
S+ I C +G V+ A F+QM G PN I+ L++ Y ++ RV E +L+ M
Sbjct: 751 FSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 156/338 (46%), Gaps = 31/338 (9%)
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG------RLGKVKGGCRF---LKEMERK 230
P V T +++ LC+ GR+ DA +L S G R V G CR L + ER
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERM 159
Query: 231 ------GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+V TYN L++ YC G L+ A + DM + N T TL++GLCS
Sbjct: 160 LASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMP---FAPNSYTNSTLLKGLCSN 216
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPRAVD 343
DD ++L M + G + +++ L + D A+ L QM K R V
Sbjct: 217 KEWDDAEELLSEM--IRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVI 274
Query: 344 RSLKILGFCVD-GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+I+ + G VE+A FDQM + P++ Y+ ++ C++ R +A L+ M
Sbjct: 275 VYNEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGTLIAGM 331
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P TFNTV+S LC +G V A+++VE+ + G P + YS L+ AL E+
Sbjct: 332 VRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPK---YGCKPDNFTYSALVNALSER 388
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
G A LL + K P+ + + S+L L + W
Sbjct: 389 GCVDDALELLRTIPWK---PNTVCYRSVLKGLCRADRW 423
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 16/269 (5%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC- 282
+++ ER +P +LI C G LD A V + G + + VT +TL+ G C
Sbjct: 94 MRDPERPAAVP----CTLLIKKLCAAGRLDDAERVLGASERAGTA-DAVTRNTLVAGYCR 148
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
+GGR+ D ++L + S GS ++ YN+++ G RE + ++A + M P +
Sbjct: 149 AGGRLADAERMLASLALS--GSADVVT-YNTLVAGYCREGRLNDARRLVADM-PFAPNSY 204
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
S + G C + +DA+ +MI G PN + + +IH+ CQ A ++ +M
Sbjct: 205 TNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQM 264
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+ +N ++S L G V AL L ++ P Y+ ++K LC
Sbjct: 265 SKCRCTRGVIVYNEIISCLAELGRVEEALHLFDQ------MPCKPDIFSYNTVMKGLCRD 318
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G ++ A L+ MV K PD +T+N+++
Sbjct: 319 GRWEDAGTLIAGMVRKDCPPDEVTFNTVI 347
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 328 LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+E ++ E+ P AV +L I C G ++DA+R E G + V + L+ YC
Sbjct: 91 VESMRDPER--PAAVPCTLLIKKLCAAGRLDDAERVLGAS-ERAGTADAVTRNTLVAGYC 147
Query: 388 QEE-RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ R+ +A ++ + G + T+NT+++G CR+G + A +LV DM
Sbjct: 148 RAGGRLADAERMLASLALSGSADVV-TYNTLVAGYCREGRLNDARRLVA-DM-----PFA 200
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P S S L+K LC + A LL +M+ G P+ LT+ ++ L Q
Sbjct: 201 PNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQN 251
>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic-like [Glycine max]
Length = 572
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 204/430 (47%), Gaps = 39/430 (9%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ SG+ D +Y L+ LC VG +L+ M+ G N+V YNTL+ LC +G
Sbjct: 125 MVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGN 184
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ ++ L+ + + PN T+S L+ A KE + A+ LL+ + G P++V+
Sbjct: 185 LNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNV 244
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L LC GR +A+++ + E+ KG P+V ++NIL+ S C
Sbjct: 245 LLTGLCKEGRTEEAIKLFQ-------------------ELPVKGFSPSVVSFNILLRSLC 285
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + A ++ +M + + VTY+ LI L GR + K+L M ++ G K
Sbjct: 286 YEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEM--TRSGFKAS 343
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ YN ++ L +E + D L+ L QM + P S I G V++A
Sbjct: 344 ATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYS-AISMLSEQGKVQEAFFIIQ 402
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+ + P Y LI + C++ A +++ EMT +G+ P + T+++++ G+CR+G
Sbjct: 403 SLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREG 462
Query: 426 NVGTALK----LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ ALK L E D R P +Y+ LI C+ + + + MV KG +
Sbjct: 463 MLDEALKIFRILEENDHR-------PDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCV 515
Query: 482 PDYLTWNSLL 491
P+ T+ L+
Sbjct: 516 PNENTYTILV 525
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 210/433 (48%), Gaps = 36/433 (8%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME--- 143
L+ LC N+ +++ +M G+ P++ Y L++ LCK G VG A L+ ME
Sbjct: 105 LLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHG 164
Query: 144 -EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
N VT++ L+ C NL +L LL++ G +P+ T + +LE V +A+
Sbjct: 165 FPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAM 224
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++L+ ++ KG PN+ +YN+L++ C+ G + A+ +F ++
Sbjct: 225 KLLD-------------------DIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQEL 265
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ G S + V+++ L+R LC GR ++ ++L M+ KE + YN ++ L
Sbjct: 266 PVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMD--KEDQPPSVVTYNILITSLSLNG 323
Query: 323 QQDEALEYLKQMEKLFPRAVDRSLK--ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ ++A + L +M + +A S I C +G V+ +C DQMI PN Y
Sbjct: 324 RTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYS 383
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
I ++ +V+EA +++ + P+ + +++ LCR+GN A +++ E +
Sbjct: 384 A-ISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTK- 441
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI--CLSQQT 498
G P S YS LI+ +C +G A + + PD +N+L++ C +Q+T
Sbjct: 442 --YGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRT 499
Query: 499 TW---LLLLLLNE 508
+ L+++N+
Sbjct: 500 DLSIEIFLMMVNK 512
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 191/422 (45%), Gaps = 39/422 (9%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+KM G + TY L+KGLC+ + +LL + +G+ PN+ Y+ L+ + K
Sbjct: 158 EKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKE 217
Query: 130 GKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
V A L+ D+ EPN V++++L+ CKE A+ L ++ GF P VV+
Sbjct: 218 RGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSF 277
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+L LC GR +A E+ L EM+++ P+V TYNILI+S
Sbjct: 278 NILLRSLCYEGRWEEANEL-------------------LAEMDKEDQPPSVVTYNILITS 318
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK---- 301
G + A V ++M G + +Y+ +I LC G++D LK L M +
Sbjct: 319 LSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPN 378
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
EG+ IS L + + EA ++ + ++ FP I C GN
Sbjct: 379 EGTYSAIS-------MLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYP 431
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + +M + G P+ Y LI C+E + EA ++ + + + + P +N ++
Sbjct: 432 AFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALIL 491
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
G C+ ++++ + + +G +P Y+ L++ L + A+ L+ ++ K
Sbjct: 492 GFCKAQRTDLSIEIF---LMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELYLKK 548
Query: 480 IL 481
+L
Sbjct: 549 VL 550
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 172/361 (47%), Gaps = 29/361 (8%)
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
KE + +A + LE G P+V T++L LC + AV ++E
Sbjct: 76 KELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEM----------- 124
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M G +P+ +Y L++ C+ G + A+ + M+ G N VTY+TL+
Sbjct: 125 --------MVGSGIIPDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLV 176
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
+GLC G ++ L++L + +K+G Y+ +L Y+E DEA++ L + +
Sbjct: 177 KGLCMHGNLNQSLQLLDRL--TKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKG 234
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
P V ++ + G C +G E+A + F ++ +G P+VV ++ L+ + C E R EA+
Sbjct: 235 GEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEAN 294
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
EL+ EM P T+N +++ L G A K+++E R + S + Y+P+I
Sbjct: 295 ELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKAS---ATSYNPII 351
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ---QTTWLLLLLLNEMVSFV 513
LC++G L QM+ + P+ T++++ + Q Q + ++ L +F
Sbjct: 352 ARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFP 411
Query: 514 M 514
M
Sbjct: 412 M 412
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 181/421 (42%), Gaps = 68/421 (16%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARA 66
P + + T+++GL +N ++ D +++ + P+ ++ +L+ KE +D A
Sbjct: 166 PTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMK 225
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++A G + + +Y +L+ GLC R + KL + +G P+ V +N L+ SL
Sbjct: 226 LL-DDIIAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSL 284
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C G+ A L+++M++ P+ VT++ILI + A +L++ GF
Sbjct: 285 CYEGRWEEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASA 344
Query: 183 VTITKVLELLCSVGRV---------------------MDAVEILEESGEQGRLGKVKGGC 221
+ ++ LC G+V A+ +L E G KV+
Sbjct: 345 TSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSAISMLSEQG------KVQEAF 398
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
++ + K P D Y LI+S C G A + +M G + + TY +LIRG+
Sbjct: 399 FIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGM 458
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C G +D+ LKI +++E++ + I YN++
Sbjct: 459 CREGMLDEALKIFRILEENDH--RPDIDNYNAL--------------------------- 489
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
ILGFC + + F M+ +G VPN Y L+ EE A++LMKE
Sbjct: 490 ------ILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKE 543
Query: 402 M 402
+
Sbjct: 544 L 544
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 199/427 (46%), Gaps = 39/427 (9%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V D YTY ++KGLC + +L+ M PN V + T I + C+NG + RA
Sbjct: 3 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L+ M + P+ + +S L+ + + + AL LL P+ V L+ L
Sbjct: 63 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLC---RPNTVCYNAALKGL 119
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C GR EE GE + EM RK C PN T++ LI+S C+ ++
Sbjct: 120 CIAGR-------WEEVGE------------LIAEMVRKDCPPNDATFSTLINSLCQNRLV 160
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A++V M+ G + V+Y+T+I R DD LK+L+ M K +N
Sbjct: 161 EYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM-----LCKPDTISFN 215
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEE 370
+VL L + + +A+E + +M K R + + IL C +G V+DA F+ M +
Sbjct: 216 AVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKY 275
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
+P++V Y LI+ + ++ A +L + M + ++N L GLC A
Sbjct: 276 RCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADI---FSYNATLKGLCMAARWDDA 332
Query: 431 LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+L+ DM + LP ++ LI +LC+KG A + QM GI PD T+N+L
Sbjct: 333 GELI-ADM--VTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNAL 389
Query: 491 LICLSQQ 497
+ S+Q
Sbjct: 390 INGYSEQ 396
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 223/495 (45%), Gaps = 49/495 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + TV++GL A+ + + R + P+ F + + + + L RA
Sbjct: 5 PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGL-LDRAVE 63
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M G D Y+ L+ G RV + KLL+ M R PN+V YN + LC
Sbjct: 64 LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLC 120
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ L+++M PND TFS LI + C+ + A+ +LE+ +G++PDVV
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ R DA+ + LK M C P+ ++N ++
Sbjct: 181 SYNTIISCFSDQARADDAL-------------------KLLKSM---LCKPDTISFNAVL 218
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ A+++ M N +T++ LI LC G++ D +++ +LM K
Sbjct: 219 KCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELM--PKYR 276
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNVEDA 360
I Y+S++ G + + A + + M +F + + +LK G C+ +DA
Sbjct: 277 CMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIF--SYNATLK--GLCMAARWDDA 332
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M+ E +PN V ++ LI + CQ+ V A ++ ++M +G P T+N +++G
Sbjct: 333 GELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALING 392
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
QG + ALK + P + Y+ ++K LC ++ A L+ +M+ K
Sbjct: 393 YSEQGRLDDALKFLS------TMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNC 446
Query: 481 LPDYLTW---NSLLI 492
P+ +T+ N L I
Sbjct: 447 TPNEVTFKYANQLFI 461
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 40/224 (17%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN+VL GL Q ++A E +++M P V + +I FC +G ++ A +QM
Sbjct: 10 YNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMP 69
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G P+V+IY L++ + + RV EA +L+ M P +N L GLC G
Sbjct: 70 KYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWE 126
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+L+ E +R + P +S LI +LC+ + A +L QM G +PD +++N
Sbjct: 127 EVGELIAEMVR---KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYN 183
Query: 489 --------------------------------SLLICLSQQTTW 500
++L CL + W
Sbjct: 184 TIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRW 227
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 227/499 (45%), Gaps = 35/499 (7%)
Query: 41 NMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
N P + N++L+ L+++ +++AR Y + + G D+Y+ I+++GLC +V +
Sbjct: 165 NYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCW-DNYSVCIMVRGLCKERKVEE 223
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
G KL++ +G PN V YNTL+ K G V RA L +++ P T+ I+I
Sbjct: 224 GRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMIN 283
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--- 212
CK+ N LL + G +V +++ G ++ + L E G
Sbjct: 284 GLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEP 343
Query: 213 -------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
R GKV L+ ++G PN +Y LI YC+ G A D+F
Sbjct: 344 DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
M G + V Y L+ GL + G +D L + M + G + YN ++ GL
Sbjct: 404 IGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVE--RGVLPDANVYNVLMNGLC 461
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
++ + A L +M + L A + + GF G +++AK+ F+ I +G P VV
Sbjct: 462 KKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVV 521
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ +I YC+ + +A ++ M + P T++T++ G +Q ++ ALKL +
Sbjct: 522 GYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQM 581
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC---- 493
++ + P Y+ LI C G A +M G+ P+ +T+ L+ C
Sbjct: 582 VK---QKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKE 638
Query: 494 --LSQQTTWLLLLLLNEMV 510
+S+ ++ L+LLN +
Sbjct: 639 GKISKACSFFELMLLNRCI 657
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 214/479 (44%), Gaps = 52/479 (10%)
Query: 45 SLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL 104
+++++NSI+D +K + + + +G + D TY L+ G C +V + +LL
Sbjct: 309 NVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELL 368
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PND-VTFSILICAYCKE 160
RG+ PN + Y LIH CK GK RA L M E P D V + L+
Sbjct: 369 EHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAA 428
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
+ AL + +K G +PD ++ LC GR + A ++L
Sbjct: 429 GEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGR-LSAAKLL--------------- 472
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
L EM + + L+ + G LD A +F G+ V Y+ +I+G
Sbjct: 473 ---LVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKG 529
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM-- 334
C G ++D L +Q M+D G SP Y++++ G ++N AL+ QM
Sbjct: 530 YCKFGMMNDALTCVQRMKD------GDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVK 583
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+K P V + I GFC G+ A++ F++M G PNVV Y LI +C+E ++ +
Sbjct: 584 QKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISK 643
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL------------KLVEEDMRG-I 441
A + M + +P TFN +++GL N+ TA+ L+ + R I
Sbjct: 644 ACSFFELMLLNRCIPNDVTFNYLINGL--TNNLATAVSNKANESLEIKASLMMDFFRTMI 701
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
G Y+ ++ LC +A L +M GKGI PD +++ +L+ +CL ++
Sbjct: 702 SDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRS 760
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 180/413 (43%), Gaps = 37/413 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P D + ++ GL A ++ + D + + P ++N +++ L K+ A
Sbjct: 412 PLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKL 471
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ + D + A L+ G ++ + KL + ++G+ P V YN +I C
Sbjct: 472 LLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYC 531
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A + + M++ P++ T+S +I Y K+ +L NAL L + P+VV
Sbjct: 532 KFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVV 591
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ C G A + E EM G PNV TY ILI
Sbjct: 592 TYTSLINGFCRTGDSSRAEKTFE-------------------EMRSSGLKPNVVTYTILI 632
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG------GRIDDGLKI-LQL 296
+C+ G + A F M ++ N VT++ LI GL + + ++ L+I L
Sbjct: 633 GCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASL 692
Query: 297 MEDS-----KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
M D +G + R++ YNSVL L + AL+ +M + +FP V + +
Sbjct: 693 MMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVY 752
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
G C++G ++ K + E + V Y ++ + + EAS++ +
Sbjct: 753 GLCLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTL 805
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 192/474 (40%), Gaps = 48/474 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + + T+I G R +++ + + + ++P+ + ++ V K+ L RAF
Sbjct: 343 PDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCL-RAFD 401
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G D Y L+ GL V + M RGV P++ +YN L++ LC
Sbjct: 402 LFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLC 461
Query: 128 KNGKVGRARSLMSDMEEPN----DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A+ L+ +M N + L+ + + L A L E + + G P VV
Sbjct: 462 KKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVV 521
Query: 184 TITKVLELLCSVGRVMDAVEILE--ESGEQG--------------RLGKVKGGCRFLKEM 227
+++ C G + DA+ ++ + G+ + + + +M
Sbjct: 522 GYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQM 581
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
++ C PNV TY LI+ +C TG A F +M+ G+ N VTY LI C G+I
Sbjct: 582 VKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKI 641
Query: 288 DDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRE------NQQDEALEYLKQMEKL 337
+LM R P +N ++ GL N+ +E+LE +
Sbjct: 642 SKACSFFELM------LLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMD 695
Query: 338 F----------PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
F R + ++ C V A + D+M +G P+ V + L++ C
Sbjct: 696 FFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLC 755
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
E R +E + L IA ++ L+ +G A K+ + G+
Sbjct: 756 LEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLLEGV 809
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 49/453 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G ++G +++++M + G PN ++N+L+HS C A L++ M
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203
Query: 143 E----EPNDVTFSILICAYCKEENLVNA--LVLLEKSF----SFGFVPDVVTITKVLELL 192
P V ++I I + C +E L + L L EK + + V + V + L
Sbjct: 204 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 263
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
C VG+ A ++++E +G KV+ +EM+ G P+V
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY ILI S+C+ G+++ A +F +M+ G S VTY LI ++ I
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------------------EKLF 338
M D+ G + Y +++ GL + +A E ++ L
Sbjct: 384 MVDA--GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + G C V+ A D M+ G PN ++YD LI +C+ ++ A E+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+MT GYLP T+ +++ + + G + A+K++ + ++ P Y+ +I
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD---SCTPNVVTYTAMIDG 558
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC G + A LL M KG P+ +T+ +L+
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 194/433 (44%), Gaps = 16/433 (3%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+MM G D TY+ ++ LC +V F L MK GV P+ Y LI S CK
Sbjct: 277 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 336
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +A+ L +M P VT++ LI AY K + + A + + G P+ VT
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ LC G + A E+ + G F E +R PNV TY L+
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKL--IGTSDSADSDFYFPCE-DRHTLAPNVVTYGALVDG 453
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ +D A ++ + M G N + YD LI G C G+ID ++ M +K G
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM--TKCGYL 511
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y S++ ++++ + D A++ L QM K P V + I G C G E A +
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y LI + ++ + +L +M+ G P T+ +++ LC
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G + A L+ E + L G Y I+ + F ++ +L +M G +P
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQG---YRCAIQGFSK--SFIASLGILEEMESYGTVPI 686
Query: 484 YLTWNSLLICLSQ 496
+ L+ C S+
Sbjct: 687 APVYGMLIDCFSK 699
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 215/514 (41%), Gaps = 46/514 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD S + VI L A + + +TP + + ++D K + +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M + G TY L+ +V + H M G +PN V Y L+ LCK
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405
Query: 129 NGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNALV 168
G + +A + + + PN VT+ L+ CK + +A
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
LL+ S G P+ + +++ C G++ A E+ FL +M
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV------------------FL-QMT 506
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G LP+V TY LI + G LD A+ V + M D + N VTY +I GLC G +
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
LK+L LME+ +G + Y +++ GL + + D +L+ QM + P V +
Sbjct: 567 KALKLLSLMEE--KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I C G ++ A+ +M + + Y C I + + + +++EM +G
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYG 682
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+PIA + ++ + G + A++L +E M + + Y+ LI+ALC +
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME-VPSSVKTDNDMYASLIQALCLASQVE 741
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A L +M +G +P+ + L+ L + W
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 191/439 (43%), Gaps = 41/439 (9%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
Q P IF ++ R + L N++ + +++ ++ D D
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYF 432
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +A V TY L+ GLC ++V +LL M S G +PN ++Y+ LI
Sbjct: 433 PCEDRHTLAPNV----VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 488
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK GK+ A+ + M + P+ T++ LI K+ L A+ +L + P+
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VVT T +++ LC R+G+ + + L ME KGC PNV TY
Sbjct: 549 VVTYTAMIDGLC-------------------RIGESEKALKLLSLMEEKGCSPNVVTYTA 589
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI + G +D +LD+F M G S N+VTY LI LC+ G +D +L M+ +
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+ Y + G + +L L++ME P A + I F G +E
Sbjct: 650 WPK--YLQGYRCAIQGFSKSFIA--SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 705
Query: 360 AKRCFDQMIEEGGVPNVV-----IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
A +M+E VP+ V +Y LI A C +V EA L EMT G++P S F
Sbjct: 706 AMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 762
Query: 415 NTVLSGLCRQGNVGTALKL 433
++ GL AL+L
Sbjct: 763 VCLIKGLVEVKKWDEALQL 781
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 182/467 (38%), Gaps = 93/467 (19%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEEN 162
+K G +P+ V YN L+ L G+V + +M E + T A CKE
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE--------------- 207
+AL ++E+ F D V T ++ L +A+ L
Sbjct: 91 WADALDMIERE---DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147
Query: 208 --SG--EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
SG ++ +LG K R + M +GC PN +N L+ SYC A + N M
Sbjct: 148 LLSGFLKKKQLGWCK---RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 264 IDGISWNFVTYDTLI-----------------------------------------RGLC 282
G +V Y+ I R LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
G+ D ++++ M ++G S Y+ V+ L + ++A ++M+ + P
Sbjct: 265 GVGKFDKAFQLIKEM--MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I FC G +E A+ F++M G P VV Y LIHAY + ++V +A+++
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP------ 454
M G P T+ ++ GLC+ GN+ A ++ + IG S Y P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA---KLIGTSDSADSDFYFPCEDRHT 439
Query: 455 ----------LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ LC+ A LL M+ G P+++ +++L+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 486
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 153/389 (39%), Gaps = 68/389 (17%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TYN L+ G +D V +M G + T LC GR D
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKI 348
L +++ +E K ++ GL + DEA+ +L +M P V +
Sbjct: 95 LDMIE-----REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF + KR + M+ EG PN +++ L+H+YC E+ A +L+ MT G
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209
Query: 409 PIASTFNTVLSGLCRQ-----------------------------------------GNV 427
P +N + +C Q G
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A +L++E MR +G +P + YS +I LC + A +L +M G+ PD T+
Sbjct: 270 DKAFQLIKEMMR---KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 488 NSLL--IC---LSQQTTWLLLLLLN-----EMVSFVMVVHE-LSAKEKRCKLRSLNHLAH 536
L+ C L +Q WL + + +V++ ++H L AK+ + N + H
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ----VPQANDIFH 382
Query: 537 GAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
V G R +D T+ ++D + G++
Sbjct: 383 RM--VDAGCRPNDVTYGALVDGLCKAGNI 409
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 197/451 (43%), Gaps = 61/451 (13%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
+K H +K++G+KP+ V Y ++I LCK G++G A L + ME P ++ +I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV---EILEESGEQG 212
Y +A LLE+ G +P VV+ +L L +V +A+ E++++ E
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPN 121
Query: 213 RL------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
G+V+ R L EME PN+ T NI++ C+ L+ A +F
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
G + + VTY +LI GL G++D+ ++ + M D+ G Y S++ +
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDA--GHNANPVVYTSLIRNFFI 239
Query: 321 ENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPN 375
++++ + K+ L R L +L +D G VE + F+ + G +P+
Sbjct: 240 HGRKEDGHKIFKE---LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPD 296
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V Y LIH + + RE S + M G+ A +N V+ G C+ G V A +++E
Sbjct: 297 VRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILE 356
Query: 436 EDMRGIGRGSLPGSGH--------------------------------YSPLIKALCEKG 463
E + ++ G YS LI + G
Sbjct: 357 EMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
A ++L +M+ KG+ P+ TWNSLL L
Sbjct: 417 RIDEAYLILEEMMKKGLTPNVYTWNSLLDAL 447
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/527 (24%), Positives = 240/527 (45%), Gaps = 38/527 (7%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLA 64
+S P + T+I G G A D K + + PS+ FNSIL L K +D A
Sbjct: 48 RSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEA 107
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + ++M + + TY I++ LCL RV + +++L M+ + PN + N ++
Sbjct: 108 LSLF--EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 165
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LCK K+ A + + P+ VT+ LI K+ + A L EK G
Sbjct: 166 RLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNA 225
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ V T ++ GR D +I +E +G + G+V+ G
Sbjct: 226 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 285
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+++ G LP+V +Y+ILI + G ++F+ MK G + + Y+ ++ G C
Sbjct: 286 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKS 345
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G++ +IL+ M++ + + ++ Y +++ GL + ++ DEA ++ + + V
Sbjct: 346 GKVHKAYEILEEMKE--KCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
S I GF G +++A ++M+++G PNV ++ L+ A + E + EA + M
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P T++ +++GLCR A + +DM+ +G +P Y+ +I L +
Sbjct: 464 KEMKCPPNTYTYSILINGLCRVQKYNKAF-VFWQDMQ--KQGLVPNVVTYTTMISGLAKV 520
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ--------QTTWL 501
G A L + G +PD ++N+L+ +S Q WL
Sbjct: 521 GNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAGWL 567
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 184/420 (43%), Gaps = 27/420 (6%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE- 59
M H+ P ++ I V R L +AR + + K + S+ P + S++D L K+
Sbjct: 148 MEHASLFPNLLTVNIMVDR-LCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKG 206
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A + +KM+ +G + Y L++ + R DG K+ + RG KP+ +
Sbjct: 207 QVDEAYRLF-EKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 265
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NT + + K G+V + R + D+ P+ ++SILI K +
Sbjct: 266 NTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQ 325
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKG 219
GF D V++ C G+V A EILEE E+ ++ ++
Sbjct: 326 QGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDE 385
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+E + KG NV Y+ LI + + G +D A + +M G++ N T+++L+
Sbjct: 386 AYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLD 445
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
L I++ L Q M++ K Y+ ++ GL R + ++A + + M+K L
Sbjct: 446 ALVKAEEINEALVCFQSMKEMK--CPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGL 503
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V + I G GN+ DA F++ GG+P+ ++ LI R EA +
Sbjct: 504 VPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A + E+ G P ++ +++ LC+ G +G A +L + S+P + Y+
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME---AERSVPCAYAYNT 58
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+I G F+ A LL ++ +G +P +++NS+L CL ++
Sbjct: 59 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKK 101
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 234/509 (45%), Gaps = 68/509 (13%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKE 59
MP S + PD + ++ G +A V++ D LV P+L +N +LD L K
Sbjct: 219 MPRS-RVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKF 277
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++M+A+ +Q D TY IL+ GLC + V ++ + G+ ++ +Y
Sbjct: 278 GRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMY 337
Query: 120 NTLIHSLCKNGKVGRA------------RSLMS---------------------DMEE-- 144
N+L+ C+ G+V A R+L + D+ E
Sbjct: 338 NSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKD 397
Query: 145 ----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
P+ VTF LI C+ A + E++ G DV + + ++ LC+VGR++D
Sbjct: 398 VACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVD 457
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
AV++ E+ M++ GC PN YN LIS +C+ A+ +++
Sbjct: 458 AVKVYEK-------------------MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M +G S +TY+TLI GLC + + + + M ++ G I+ Y S++ GL+
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN--GFTPDITTYGSLIRGLFS 556
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP-NVV 377
+ + D+AL KQ+ + L + ++ I G C G V++A F M E+ P N+V
Sbjct: 557 DKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV 616
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y+ L+ + + +A+ L +T G P ++NT + GLC + ++L++E
Sbjct: 617 TYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEV 676
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ RG +P ++ L++A+ + G Q
Sbjct: 677 L---SRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 216/508 (42%), Gaps = 66/508 (12%)
Query: 11 ESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES + V+ RA M + + A L S P ++ N++LD V+ AR F
Sbjct: 83 ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVR-----ARRF-- 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
D +A L H R + PN YN ++ SLC
Sbjct: 136 --------SDADAFFA----------------SLSHGAFGRRIAPNLQTYNIVLRSLCAR 171
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + RA +L + P+ +T+S L+C K++ L +AL LL++ PDVV
Sbjct: 172 GDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCY 231
Query: 186 TKVLELLCSVG------RVMDAVEILEESGEQGRLGK----VKGGCRF---------LKE 226
+L G RV D +++++ G + L + G C+F +
Sbjct: 232 NALLGGCFKAGEFEKVMRVWD--KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M P+V TY ILI C +G +D A V++++ G+ + Y++L++G C GR
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVD 343
+ + K + + + YN ++ GL+ DEA+E +EK P V
Sbjct: 350 VQEAWK---FWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVT 406
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
I G C +G A F++ G +V Y +I+ C R+ +A ++ ++M
Sbjct: 407 FGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMD 466
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P + +N ++SG C+ A+++ + G P Y+ LI LC+
Sbjct: 467 KDGCKPNSHIYNALISGFCQVYRTSDAVRIYS---KMADNGCSPTVITYNTLIDGLCKAE 523
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
+Q AS + +MV G PD T+ SL+
Sbjct: 524 KYQEASSVAREMVENGFTPDITTYGSLI 551
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 224/511 (43%), Gaps = 72/511 (14%)
Query: 42 MTPSLKIFNSILDVL-VKEDIDLARAFY---RKKMMASGVQGDDYTYAILMKGLCLTNRV 97
+ P+L+ +N +L L + D+D A + R++ +A D TY+ LM GL +R+
Sbjct: 154 IAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAP----DRITYSTLMCGLAKQDRL 209
Query: 98 GDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-----EEPNDVTFSI 152
LL M V+P+ V YN L+ K G+ + + + PN T+++
Sbjct: 210 DHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNV 269
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
++ CK + E+ + PDV+T ++ LC G V A + E + G
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329
Query: 213 ----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ G+V+ +F G L N+ TYNI+I ++G++D A+
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAG-LRNLRTYNIMIKGLFDSGMVDEAI 388
Query: 257 DVFNDMKID-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
++++ ++ D + VT+ TLI GLC G + I + E G + + Y+S++
Sbjct: 389 ELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE--EARVSGKQLDVFSYSSMI 446
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL + +A++ ++M+K P + + I GFC DA R + +M + G
Sbjct: 447 NGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCS 506
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF------------------- 414
P V+ Y+ LI C+ E+ +EAS + +EM +G+ P +T+
Sbjct: 507 PTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSI 566
Query: 415 ----------------NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
N ++ GLC G V AL V DM+ + P Y+ L+
Sbjct: 567 WKQILYKGLKVDVMMHNILIHGLCSAGKVDEALH-VFSDMKE-KKNCPPNLVTYNTLMDG 624
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
L E G A+ L + G+ PD +++N+
Sbjct: 625 LYETGYIDKAATLWTSITEDGLEPDIISYNT 655
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 210/481 (43%), Gaps = 43/481 (8%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+A + R P+L N++LD LVK +M+ G+ TY L+
Sbjct: 129 EALYVFRRLWTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINAC 188
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PND 147
V ++ M +R + PN + Y ++I LC+ G +G A L M+E PN
Sbjct: 189 RYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQ 248
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
T+++L+ +C+ +++ +A VL ++ + G +P+ V T +++ C R +A ++
Sbjct: 249 YTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMF-- 306
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
++M R G P V YN L+ +G AL ++ +M G+
Sbjct: 307 -----------------RDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGL 349
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ T ++RGLC GG+I + L+ + + +G + YN+++ R +EA
Sbjct: 350 CPDEFTCSIVVRGLCDGGQIQVAARFLEGVRE--DGVNLNAAAYNALIDEYCRNGNLEEA 407
Query: 328 LEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
L +M ++ P V S I G G ++ A + +M+ +G PNVV Y LIH
Sbjct: 408 LATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHG 467
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+ + + A KEM +G P A T + ++ GLCR+ V A++ V E GI
Sbjct: 468 HAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEH-SGIKYSD 526
Query: 446 ---------------LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+P S Y LI L G A L M G++ D T+ L
Sbjct: 527 IHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLL 586
Query: 491 L 491
+
Sbjct: 587 I 587
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 192/466 (41%), Gaps = 42/466 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
V+ GL +AR + D + R M PS+ +N++++ + +M+A
Sbjct: 148 AVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVAR 207
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
+ + TY ++ LC +GD +L MK G++PN YN L+ C+ V A
Sbjct: 208 QIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSA 267
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L ++ PN V F+ LI +CK + A + FG P V +++
Sbjct: 268 FVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDG 327
Query: 192 LCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPN 235
G +A+ + +E G G+++ RFL+ + G N
Sbjct: 328 AFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLN 387
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
YN LI YC G L+ AL M G+ N V+Y +LI G G++ + I
Sbjct: 388 AAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYT 447
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
M +G + + Y ++++G + D A + K+M + P A+ S+ + G C
Sbjct: 448 EM--VAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCR 505
Query: 354 DGNVEDAKR---------------CFDQMI--EEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ V+DA R F EE +PN IY LI+ + + EA
Sbjct: 506 ENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAG 565
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+L M G + + T+ ++ G C G V A+ L DM IG
Sbjct: 566 KLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLY-ADMMKIG 610
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 162/376 (43%), Gaps = 53/376 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ +F T+I G +A+ ++ + RF + P++ ++NS++D + D A +
Sbjct: 281 PNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSL 340
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y ++M G+ D++T +I+++GLC ++ + L ++ GV N+ YN LI C
Sbjct: 341 Y-QEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYC 399
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+NG + A + + M EPN V++S LI + K + A+ + + + G P+VV
Sbjct: 400 RNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVV 459
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T ++ + G + RF KEM G PN T ++L+
Sbjct: 460 TYTALIH-------------------GHAKNGGIDAAFRFHKEMIENGISPNAITVSVLV 500
Query: 244 SSYC-ETGVLDSALDVF--NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
C E V D+ V + +K I F + T L I
Sbjct: 501 DGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAI------------- 547
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVE 358
Y +++YGLY + Q EA + M K + + +L I G C+ G V
Sbjct: 548 ----------YMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVL 597
Query: 359 DAKRCFDQMIEEGGVP 374
+A + M++ G P
Sbjct: 598 NAMMLYADMMKIGVKP 613
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/507 (27%), Positives = 225/507 (44%), Gaps = 62/507 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P I+ +I GL + + +ND + D + + PSL +N+++D K
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R++M A ++ T+ L+KGL V D +L MK G P++ ++ L
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 129 NGK----VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
N K +G + + + N T SIL+ A CKE + A +L + + G VP+ V
Sbjct: 332 NEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Query: 185 ITKVLELLCSVGRVMDA---VEILEESGEQG-------------RLGKVKGGCRFLKEME 228
+++ C G ++ A +E +E+ G + LG+++ + + +M+
Sbjct: 392 YNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P+V+TYNILI Y D D+ +M+ +G N V+Y TLI LC G ++
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ + + MED K RI YN + I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRI--YNML---------------------------------I 536
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +EDA R +M+++G N+V Y+ LI ++ EA +L+ E++ G
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T+N+++SG GNV + L EE R G P Y LI +LC K G +
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRS---GIKPTLKTYHLLI-SLCTKEGIELT 652
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLS 495
L +M K PD L +N +L C +
Sbjct: 653 ERLFGEMSLK---PDLLVYNGVLHCYA 676
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 247/546 (45%), Gaps = 42/546 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAF 67
P F T+++GL +A M+ D + P F+ + D E + A
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y + + SGV+ + YT +IL+ LC ++ ++L ++G+ PN VIYNT+I C
Sbjct: 342 Y-ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + AR + ME+ P+ + ++ LI +C+ + NA + K G P V
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 184 TITKVLELLCSVGRVMD---AVEILEESGEQGRLGKVKG----------GCRFL------ 224
T L+ GR + +IL+E + G + V G + L
Sbjct: 461 TYNI---LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
++ME +G P V YN+LI C G ++ A +M GI N VTY+TLI GL
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
G++ + +L +E S++G K + YNS++ G + ++M++ + +
Sbjct: 578 GKLSEAEDLL--LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 345 SLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ +L C +E +R F +M + P++++Y+ ++H Y + +A L K+M
Sbjct: 636 TYHLLISLCTKEGIELTERLFGEMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMI 692
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
+T+N+++ G + G + L++E R P + Y+ ++K CE
Sbjct: 693 EKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMN---AREMEPEADTYNIIVKGHCEVK 749
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICL-----SQQTTWLLLLLLNEMVSFVMVVHE 518
+ SA + +M KG L D N L+ L S++ ++ + M+ V V +
Sbjct: 750 DYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRMLGDVTVDED 809
Query: 519 LSAKEK 524
LSA EK
Sbjct: 810 LSATEK 815
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 222/484 (45%), Gaps = 36/484 (7%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGD 80
L ++MI++ + + PS +LD LVK ++ S +
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 81 DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
+ Y ++ + VG G +L + MK + P+ IYN LI LCK ++ A L
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 141 DMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
+M P+ +T++ LI YCK N + + E+ + P ++T +L+ L G
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
V DA + LKEM+ G +P+ T++IL Y ++AL
Sbjct: 299 MVEDAENV-------------------LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP---YNS 313
V+ G+ N T L+ LC G+I+ +IL +E +KG + YN+
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL-----GREMAKGLVPNEVIYNT 394
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G R+ A ++ MEK + P + + I FC G +E+A++ ++M +G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P+V Y+ LI Y ++ + +++KEM +G +P ++ T+++ LC+ + A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA- 513
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++V+ DM RG P Y+ LI C KG + A +M+ KGI + +T+N+L+
Sbjct: 514 QIVKRDME--DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 492 ICLS 495
LS
Sbjct: 572 DGLS 575
>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
Length = 1014
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 210/456 (46%), Gaps = 17/456 (3%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+N+IL VK+ A + M + D YTY I++ LC R F LL M+
Sbjct: 260 YNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMR 319
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
+ P+ YNTLI+ GK+ A + + M P+ T++ +I YC+ +
Sbjct: 320 KDDLIPDECTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRID 379
Query: 165 NALVLLEKSFSFGFVPDVVTITK-VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
AL +L + G +P ++ K +L+ + G D V E G + F
Sbjct: 380 KALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINE----GMITEAEHF 435
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ M R + ++N +I SYC G + A V++ M G S N TY L+RGLC
Sbjct: 436 RQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQ 495
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRA 341
GG + + + + D + +N++L G+ + DEAL+ ++M K P
Sbjct: 496 GGHLVQAKQFMFCLLDIPSAIDEK--TFNALLLGICKYGTLDEALDLCEKMVKNNCLPDI 553
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
++ + GFC G + A M+++G VP+ V Y CL++ E +V+ AS + +E
Sbjct: 554 HTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQE 613
Query: 402 MT-GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+ G +N++++G + GN+ T +K + DM P S Y+ L+
Sbjct: 614 IICKEGLYADCIAYNSLMNGYLKGGNINT-IKRMMSDM--YQSEVYPNSASYNILMHGYV 670
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ G F + L MV KGI PD +T+ L++ LS+
Sbjct: 671 KGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSE 706
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 133/532 (25%), Positives = 230/532 (43%), Gaps = 82/532 (15%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSL---KIFNSILDVLVK-----ED 60
P+ + ++RGL + +V+A + PS K FN++L + K E
Sbjct: 481 PNVCTYQNLLRGLCQG---GHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEA 537
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV--- 117
+DL +KM+ + D +TY IL+ G C ++ +L +M +GV P++V
Sbjct: 538 LDLC-----EKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYT 592
Query: 118 ---------------------------------IYNTLIHSLCKNGKVGRARSLMSDMEE 144
YN+L++ K G + + +MSDM +
Sbjct: 593 CLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQ 652
Query: 145 ----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
PN +++IL+ Y K +L L + G PD VT ++ L G +
Sbjct: 653 SEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDI 712
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
AV +FL++M +G P+ ++ILI+++ E + +AL +FN
Sbjct: 713 AV-------------------KFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFN 753
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
MK +S + TY +I GL +D ++L+ E + G + + Y +++ R
Sbjct: 754 CMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLR--EMLQVGLQPNHTHYIALVNAKCR 811
Query: 321 ENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ D A ++M+ L P V S I G C G +E+A F M+ G VP V
Sbjct: 812 VGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVAT 871
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
+ L+H C+E ++ +A L + M ++N +++GLC+ + AL L EE M
Sbjct: 872 FTTLMHCLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEE-M 930
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ +G P Y L A+ G Q+ LL + +G++P Y+ +L
Sbjct: 931 K--SKGLWPNVTTYITLTGAMYSTGIMQNGEELLEDIEERGLIPVYVQLENL 980
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 242/532 (45%), Gaps = 50/532 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PS-----LKIFNSILD------ 54
P + + T+I G R R I+ KA ++S +T PS +I S+L+
Sbjct: 360 PSVATYTTMIDGYCRNRRID---KALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPD 416
Query: 55 -----VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKS 109
L+ E + +R+ M + D ++ ++ C + + F + M
Sbjct: 417 IVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAMVR 476
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLM-SDMEEPNDV---TFSILICAYCKEENLVN 165
G PN Y L+ LC+ G + +A+ M ++ P+ + TF+ L+ CK L
Sbjct: 477 YGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDE 536
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------- 214
AL L EK +PD+ T T +L C G+++ A+ +L+ ++G +
Sbjct: 537 ALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLN 596
Query: 215 -----GKVKGGCRFLKEME-RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
G+VK +E+ ++G + YN L++ Y + G +++ + +DM +
Sbjct: 597 GLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVY 656
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
N +Y+ L+ G GG+ L + + M ++G + Y ++ GL D A+
Sbjct: 657 PNSASYNILMHGYVKGGQFSKSLYLYKYM--VRKGIRPDNVTYRLLILGLSECGLIDIAV 714
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
++L++M E +FP + + I F + +A + F+ M P+ Y +I+
Sbjct: 715 KFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGL 774
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
++ + ++ E+++EM G P + + +++ CR G + A +L EE M+ +G +
Sbjct: 775 IRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEE-MKALG--IV 831
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
P S +I+ LC+ G + A ++ M+ G++P T+ +L+ CL +++
Sbjct: 832 PADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKES 883
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 164/411 (39%), Gaps = 78/411 (18%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE---PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
N L++SLC NG+ +A ++ M+ N VT++ ++ Y K+ AL +LE
Sbjct: 227 NILLNSLCTNGEFRKAEDMLQKMKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERD 286
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
D+ T +++ LC + R A +L K M + +P+
Sbjct: 287 SIPADIYTYNIMIDKLCRIKRSARAFLLL-------------------KRMRKDDLIPDE 327
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TYN LI+ + G ++ A VFN M + TY T+I G C RID L +L
Sbjct: 328 CTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSE 387
Query: 297 MEDS----KEGSKGR----------ISPYNSVLYGLYRENQQDEA---LEYLKQMEKLFP 339
M+ + E SK + I P L E EA +Y+ +M+ F
Sbjct: 388 MQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFD 447
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+V + I +C GN+ +A +D M+ G PNV Y L+ CQ + +A + M
Sbjct: 448 -SVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFM 506
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ TFN +L G+C+ G + AL L
Sbjct: 507 FCLLDIPSAIDEKTFNALLLGICKYGTLDEALDL-------------------------- 540
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
CEK MV LPD T+ LL ++ L L++ +M+
Sbjct: 541 CEK------------MVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMM 579
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 142/299 (47%), Gaps = 31/299 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD +F +I +++ ++ + + M+PS K ++++++ L++++ +D +
Sbjct: 727 PDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEV 786
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R+ M+ G+Q + Y L+ C ++ F+L MK+ G+ P V +++I LC
Sbjct: 787 LRE-MLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLC 845
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A + S M P TF+ L+ CKE + +AL L S DVV
Sbjct: 846 KCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKVDVV 905
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ LC R+ DA+++ EE M+ KG PNV TY L
Sbjct: 906 SYNVLITGLCKDKRISDALDLYEE-------------------MKSKGLWPNVTTYITLT 946
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ TG++ + ++ D++ G+ +V + L R +++D ++ L ++ + ++
Sbjct: 947 GAMYSTGIMQNGEELLEDIEERGLIPVYVQLENLER------QMEDAIRRLNMIRNCRK 999
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 205/460 (44%), Gaps = 30/460 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + + G RA M+ + L+ + + ++L L+ +
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAV 164
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M A D + YA ++ GLC R + LL S G +PN V+YN LI C
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A + M+ PN T++ LI CK + A+VL + G P+VVT
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C+ G + A R L ME G +PN T+++LI
Sbjct: 285 YTALIQGQCNEGHLQCAF-------------------RLLHLMETNGLVPNDWTFSVLID 325
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ ++ A + G+ N V Y +LI GLC G+ID +++Q M EG
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM--ISEGF 383
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKR 362
Y+S++ GL R+ + +A L+ M EK + V ++ I + E K+
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD+MI G P++V Y + +YC+E R+ +A ++ +M G P T+NT++ G
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G V A E +G+G P Y+ L++ + +K
Sbjct: 504 NLGLVSQAFSTFE---VMVGKGWKPNEDSYTVLLRLVVKK 540
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 232/513 (45%), Gaps = 49/513 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ ++ +I G A + +K + + +P+++ + ++ L K ++ A
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ +G++ + TY L++G C + F+LLH+M++ G+ PN ++ LI +LC
Sbjct: 270 F-SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328
Query: 128 KNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K KV A+ SL+ + N+V ++ LI CK + A L++K S GFVPD
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ + +++ LC ++ A +LE+ E+G R +G + +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P++ TY + + SYCE G ++ A + M G+ N VTY+TLIRG + G +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-------------M 334
++M +G K Y +L + +++ D +++ K
Sbjct: 509 SQAFSTFEVM--VGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDIT 566
Query: 335 EKLFPRAVD-RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
E+ P A D S I C +E+AK F M P+ +Y +I C+ + +
Sbjct: 567 ERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILT 626
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-- 451
+A L+ MT GYLP ++ ++S LC GN TA ++ G L S +
Sbjct: 627 DALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEV-------FGDLLLKESNYDE 679
Query: 452 --YSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ LI L +KG S LL M G P
Sbjct: 680 IVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQP 712
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 232/502 (46%), Gaps = 40/502 (7%)
Query: 1 MPHSIQSP----PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL 56
+ H + SP P T++ L R RM D+ L SR +L+ + ++++
Sbjct: 27 LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDM---ESLASRMPAR-NLRTYTTLINAY 82
Query: 57 -VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
+ DI A+ + ++ +G+ D Y Y + G C + ++ +M RG
Sbjct: 83 CLAGDIPAAKQ-HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRT 141
Query: 116 SVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLE 171
+ Y L+H L G V A ++ M P+ ++ ++ C+ A VLLE
Sbjct: 142 AFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLE 201
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
++ S GF P++V +++ C+ G+++ + + M+
Sbjct: 202 EAMSNGFEPNIVVYNALIDGYCNA-------------------GEMEHALKVFEGMDGNR 242
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PNV TY LI C++G ++ A+ +F+ M G+ N VTY LI+G C+ G +
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++L LME + G ++ ++ L + + +EA +L + K + V + I
Sbjct: 303 RLLHLMETN--GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C G ++ A +MI EG VP+ Y LI C+++++ +A+ ++++M G
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ L R+ K+ + + I G P Y+ +++ CE+G + A
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFD---KMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
++VQMV +G+ P+ +T+N+L+
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLI 499
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 182/412 (44%), Gaps = 36/412 (8%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
NTL+ +L ++ SL S M N T++ LI AYC ++ A L G
Sbjct: 45 NTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLA 104
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T + C R G + CR M +GCL TY
Sbjct: 105 PDSYAYTSFVLGYC-------------------RAGMLTHACRVFVLMPLRGCLRTAFTY 145
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ G++ A+ VF M+ D + + Y T++ GLC GR + + L E
Sbjct: 146 TALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE--EAEVLLEEA 203
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNV 357
G + I YN+++ G + + AL+ + M+ + P + I G C G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A F +M+E G PNVV Y LI C E ++ A L+ M +G +P TF+ +
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ LC++ V A + ++ +G Y+ LI LC+ G +A L+ +M+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVK---KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380
Query: 478 KGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM--------VSFVMVVHEL 519
+G +PD +++SL+ +C ++ + L+L + M V++ +++ EL
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 49/453 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G ++G +++++M + G PN ++N+L+HS C A L++ M
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203
Query: 143 E----EPNDVTFSILICAYCKEENLVNA--LVLLEKSF----SFGFVPDVVTITKVLELL 192
P V ++I I + C +E L + L L EK + + V + V + L
Sbjct: 204 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 263
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
C VG+ A ++++E +G KV+ +EM+ G P+V
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY ILI S+C+ G+++ A +F +M+ G S VTY LI ++ I
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------------------EKLF 338
M D+ G + Y +++ GL + +A E ++ L
Sbjct: 384 MVDA--GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 441
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + G C V+ A D M+ G PN ++YD LI +C+ ++ A E+
Sbjct: 442 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 501
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+MT GYLP T+ +++ + + G + A+K++ + ++ P Y+ +I
Sbjct: 502 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD---SCTPNVVTYTAMIDG 558
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC G + A LL M KG P+ +T+ +L+
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 591
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 194/433 (44%), Gaps = 16/433 (3%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+MM G D TY+ ++ LC +V F L MK GV P+ Y LI S CK
Sbjct: 277 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 336
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +A+ L +M P VT++ LI AY K + + A + + G P+ VT
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 396
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ LC G + A E+ + G F E +R PNV TY L+
Sbjct: 397 GALVDGLCKAGNISKAFEVYAKL--IGTSDSADSDFYFPCE-DRHTLAPNVVTYGALVDG 453
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ +D A ++ + M G N + YD LI G C G+ID ++ M +K G
Sbjct: 454 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM--TKCGYL 511
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y S++ ++++ + D A++ L QM K P V + I G C G E A +
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y LI + ++ + +L +M+ G P T+ +++ LC
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G + A L+ E + L G Y I+ + F ++ +L +M G +P
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQG---YRCAIQGFSK--SFIASLGILEEMESYGTVPI 686
Query: 484 YLTWNSLLICLSQ 496
+ L+ C S+
Sbjct: 687 APVYGMLIDCFSK 699
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 215/514 (41%), Gaps = 46/514 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD S + VI L A + + +TP + + ++D K + +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M + G TY L+ +V + H M G +PN V Y L+ LCK
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405
Query: 129 NGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNALV 168
G + +A + + + PN VT+ L+ CK + +A
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
LL+ S G P+ + +++ C G++ A E+ FL +M
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV------------------FL-QMT 506
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G LP+V TY LI + G LD A+ V + M D + N VTY +I GLC G +
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
LK+L LME+ +G + Y +++ GL + + D +L+ QM + P V +
Sbjct: 567 KALKLLSLMEE--KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I C G ++ A+ +M + + Y C I + + + +++EM +G
Sbjct: 625 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYG 682
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+PIA + ++ + G + A++L +E M + + Y+ LI+ALC +
Sbjct: 683 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME-VPSSVKTDNDMYASLIQALCLASQVE 741
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A L +M +G +P+ + L+ L + W
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 191/439 (43%), Gaps = 41/439 (9%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
Q P IF ++ R + L N++ + +++ ++ D D
Sbjct: 373 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYF 432
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +A V TY L+ GLC ++V +LL M S G +PN ++Y+ LI
Sbjct: 433 PCEDRHTLAPNV----VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 488
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK GK+ A+ + M + P+ T++ LI K+ L A+ +L + P+
Sbjct: 489 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VVT T +++ LC R+G+ + + L ME KGC PNV TY
Sbjct: 549 VVTYTAMIDGLC-------------------RIGESEKALKLLSLMEEKGCSPNVVTYTA 589
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI + G +D +LD+F M G S N+VTY LI LC+ G +D +L M+ +
Sbjct: 590 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 649
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+ Y + G + +L L++ME P A + I F G +E
Sbjct: 650 WPK--YLQGYRCAIQGFSKSFIA--SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 705
Query: 360 AKRCFDQMIEEGGVPNVV-----IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
A +M+E VP+ V +Y LI A C +V EA L EMT G++P S F
Sbjct: 706 AMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 762
Query: 415 NTVLSGLCRQGNVGTALKL 433
++ GL AL+L
Sbjct: 763 VCLIKGLVEVKKWDEALQL 781
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 182/467 (38%), Gaps = 93/467 (19%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEEN 162
+K G +P+ V YN L+ L G+V + +M E + T A CKE
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE--------------- 207
+AL ++E+ F D V T ++ L +A+ L
Sbjct: 91 WADALDMIERE---DFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147
Query: 208 --SG--EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
SG ++ +LG K R + M +GC PN +N L+ SYC A + N M
Sbjct: 148 LLSGFLKKKQLGWCK---RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 264 IDGISWNFVTYDTLI-----------------------------------------RGLC 282
G +V Y+ I R LC
Sbjct: 205 TCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLC 264
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
G+ D ++++ M ++G S Y+ V+ L + ++A ++M+ + P
Sbjct: 265 GVGKFDKAFQLIKEM--MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I FC G +E A+ F++M G P VV Y LIHAY + ++V +A+++
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP------ 454
M G P T+ ++ GLC+ GN+ A ++ + IG S Y P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA---KLIGTSDSADSDFYFPCEDRHT 439
Query: 455 ----------LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ LC+ A LL M+ G P+++ +++L+
Sbjct: 440 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 486
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 153/389 (39%), Gaps = 68/389 (17%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+ TYN L+ G +D V +M G + T LC GR D
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKI 348
L +++ +E K ++ GL + DEA+ +L +M P V +
Sbjct: 95 LDMIE-----REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 149
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GF + KR + M+ EG PN +++ L+H+YC E+ A +L+ MT G
Sbjct: 150 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209
Query: 409 PIASTFNTVLSGLCRQ-----------------------------------------GNV 427
P +N + +C Q G
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A +L++E MR +G +P + YS +I LC + A +L +M G+ PD T+
Sbjct: 270 DKAFQLIKEMMR---KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 488 NSLL--IC---LSQQTTWLLLLLLN-----EMVSFVMVVHE-LSAKEKRCKLRSLNHLAH 536
L+ C L +Q WL + + +V++ ++H L AK+ + N + H
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQ----VPQANDIFH 382
Query: 537 GAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
V G R +D T+ ++D + G++
Sbjct: 383 RM--VDAGCRPNDVTYGALVDGLCKAGNI 409
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 57/318 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ ++ +I G +A I+ + +++ PS+ + S++D + K+ +DLA
Sbjct: 477 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 536
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ + TY ++ GLC KLL +M+ +G PN V Y LI L
Sbjct: 537 L-SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 595
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCK------------------------ 159
K GK+ + L + M PN VT+ +LI C
Sbjct: 596 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 655
Query: 160 ---------EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
++ + +L +LE+ S+G VP +++ GR+ A+E+ +E E
Sbjct: 656 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715
Query: 211 QGR------------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+V+ R EM R+G +P + + LI E
Sbjct: 716 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 775
Query: 253 DSALDVFNDMKIDGISWN 270
D AL + + +G++W
Sbjct: 776 DEALQLCYGICHEGVNWQ 793
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 206/457 (45%), Gaps = 70/457 (15%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P +E F T+IRGL + D V + LV+E+I
Sbjct: 139 PYNEVTFTTLIRGLFAENKVKDAV-------------------HLFKKLVRENI------ 173
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ D+ Y +M GLC F LL +M+ KP++ IYN +I + C
Sbjct: 174 ---------CEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFC 224
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G + A SL+++M++ P+ +T++ LI K L + PDV
Sbjct: 225 KDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVC 284
Query: 184 TITKVLELLCSVGRVMDAVEILE-------ESGE------------QGRLGKVKGGCRFL 224
T V++ LC G+V DA EI+ E E +G++G+ + R
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRAR---RIF 341
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M KG P++ +Y LI+ Y E +D A+ +F ++ +G+ + VT L+RGL
Sbjct: 342 DSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEV 401
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR + M+ + G + + ++L G ++ +EA+ + ++E+ R D
Sbjct: 402 GRTECAKIFFDEMQAA--GHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLER---RREDT 456
Query: 345 SLKIL-----GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+++I G C +G ++ A F+++ G P+V+ Y +I YCQE + EA +++
Sbjct: 457 NIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDML 516
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++M +G LP T+N ++ G R V ++E
Sbjct: 517 RKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKE 553
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 197/454 (43%), Gaps = 89/454 (19%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D + + ++ CL +R GF +L + +G+ N V + TLI L KV A L
Sbjct: 106 DAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLF 165
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ N IC PD V V++ LC G
Sbjct: 166 KKLVREN-------ICE-----------------------PDEVMYGTVMDGLCKKGHTQ 195
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A ++L RL ME+ P+ YNI+I ++C+ G+LD A +
Sbjct: 196 KAFDLL-------RL------------MEQGITKPDTCIYNIVIDAFCKDGMLDGATSLL 236
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL-MEDSKEGSKGRISPYNSVLYGL 318
N+MK I + +TY +LI GL G++ K+ L +E + +NSV+ GL
Sbjct: 237 NEMKQKNIPPDIITYTSLIDGL---GKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGL 293
Query: 319 YRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+E + ++A E + M EK + P + ++ + G+C+ G + A+R FD MI++G P++
Sbjct: 294 CKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDI 353
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+ Y LI+ Y +++++ +A +L +E++ +G P T + +L GL G A K+ +
Sbjct: 354 ISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECA-KIFFD 412
Query: 437 DMRGIGR-----------GSLPGSG-------H---------------YSPLIKALCEKG 463
+M+ G G +G H Y+ +I LC+ G
Sbjct: 413 EMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNG 472
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
A ++ G+ PD +T+ +++ Q+
Sbjct: 473 KLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 372 GVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNVGT 429
G+P N V + LI E +V++A L K++ P + TV+ GLC++G+
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQK 196
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A L+ +GI + P + Y+ +I A C+ G A+ LL +M K I PD +T+ S
Sbjct: 197 AFDLLRLMEQGITK---PDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTS 253
Query: 490 LLICLSQQTTW 500
L+ L + + W
Sbjct: 254 LIDGLGKLSQW 264
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 49/453 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G ++G +++++M + G PN ++N+L+HS C A L++ M
Sbjct: 79 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 138
Query: 143 E----EPNDVTFSILICAYCKEENLVNA--LVLLEKSF----SFGFVPDVVTITKVLELL 192
P V ++I I + C +E L + L L EK + + V + V + L
Sbjct: 139 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 198
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNV 236
C VG+ A ++++E +G KV+ +EM+ G P+V
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY ILI S+C+ G+++ A +F +M+ G S VTY LI ++ I
Sbjct: 259 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 318
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------------------EKLF 338
M D+ G + Y +++ GL + +A E ++ L
Sbjct: 319 MVDA--GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLA 376
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + G C V+ A D M+ G PN ++YD LI +C+ ++ A E+
Sbjct: 377 PNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV 436
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+MT GYLP T+ +++ + + G + A+K++ + ++ P Y+ +I
Sbjct: 437 FLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD---SCTPNVVTYTAMIDG 493
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC G + A LL M KG P+ +T+ +L+
Sbjct: 494 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALI 526
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 194/433 (44%), Gaps = 16/433 (3%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+MM G D TY+ ++ LC +V F L MK GV P+ Y LI S CK
Sbjct: 212 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 271
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +A+ L +M P VT++ LI AY K + + A + + G P+ VT
Sbjct: 272 GLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTY 331
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+++ LC G + A E+ + G F E +R PNV TY L+
Sbjct: 332 GALVDGLCKAGNISKAFEVYAKL--IGTSDSADSDFYFPCE-DRHTLAPNVVTYGALVDG 388
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ +D A ++ + M G N + YD LI G C G+ID ++ M +K G
Sbjct: 389 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM--TKCGYL 446
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ Y S++ ++++ + D A++ L QM K P V + I G C G E A +
Sbjct: 447 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 506
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M E+G PNVV Y LI + ++ + +L +M+ G P T+ +++ LC
Sbjct: 507 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 566
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G + A L+ E + L G Y I+ + F ++ +L +M G +P
Sbjct: 567 AGLLDKARLLLGEMKQTYWPKYLQG---YRCAIQGFSK--SFIASLGILEEMESYGTVPI 621
Query: 484 YLTWNSLLICLSQ 496
+ L+ C S+
Sbjct: 622 APVYGMLIDCFSK 634
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 215/514 (41%), Gaps = 46/514 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD S + VI L A + + +TP + + ++D K + +
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M + G TY L+ +V + H M G +PN V Y L+ LCK
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340
Query: 129 NGKVGRARSLMSDM--------------------EEPNDVTFSILICAYCKEENLVNALV 168
G + +A + + + PN VT+ L+ CK + +A
Sbjct: 341 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEME 228
LL+ S G P+ + +++ C G++ A E+ FL +M
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV------------------FL-QMT 441
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G LP+V TY LI + G LD A+ V + M D + N VTY +I GLC G +
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
LK+L LME+ +G + Y +++ GL + + D +L+ QM + P V +
Sbjct: 502 KALKLLSLMEE--KGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 559
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I C G ++ A+ +M + + Y C I + + + +++EM +G
Sbjct: 560 LINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYG 617
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+PIA + ++ + G + A++L +E M + + Y+ LI+ALC +
Sbjct: 618 TVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME-VPSSVKTDNDMYASLIQALCLASQVE 676
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A L +M +G +P+ + L+ L + W
Sbjct: 677 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 710
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 191/439 (43%), Gaps = 41/439 (9%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
Q P IF ++ R + L N++ + +++ ++ D D
Sbjct: 308 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYF 367
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +A V TY L+ GLC ++V +LL M S G +PN ++Y+ LI
Sbjct: 368 PCEDRHTLAPNV----VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDG 423
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK GK+ A+ + M + P+ T++ LI K+ L A+ +L + P+
Sbjct: 424 FCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 483
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
VVT T +++ LC R+G+ + + L ME KGC PNV TY
Sbjct: 484 VVTYTAMIDGLC-------------------RIGESEKALKLLSLMEEKGCSPNVVTYTA 524
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI + G +D +LD+F M G S N+VTY LI LC+ G +D +L M+ +
Sbjct: 525 LIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTY 584
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+ Y + G + +L L++ME P A + I F G +E
Sbjct: 585 WPK--YLQGYRCAIQGFSKSFIA--SLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEI 640
Query: 360 AKRCFDQMIEEGGVPNVV-----IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
A +M+E VP+ V +Y LI A C +V EA L EMT G++P S F
Sbjct: 641 AMELHKEMME---VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVF 697
Query: 415 NTVLSGLCRQGNVGTALKL 433
++ GL AL+L
Sbjct: 698 VCLIKGLVEVKKWDEALQL 716
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 137/339 (40%), Gaps = 32/339 (9%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV---------------KGGC 221
GF D T+ LC GR DA++++E E +L V
Sbjct: 5 GFCMDRFTVGCFAHALCKEGRWADALDMIER--EDFKLDTVLCTHMISGLMEASYFDEAM 62
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
FL M C+PNV TY L+S + + L + N M +G + N +++L+
Sbjct: 63 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 122
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF--- 338
C+ K+L M G YN + G ++ + + L EK++
Sbjct: 123 CNEKDYAYAYKLLNRMTTC--GCPPGYVVYN-IFIGSICGQEKLPSPDLLDLAEKIYGEM 179
Query: 339 --PRAVDRSLKILGF----CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
V + + F C G + A + +M+ +G VP+ Y +I C +V
Sbjct: 180 LAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKV 239
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A L +EM G P T+ ++ C+ G + A L EE MR +G P Y
Sbjct: 240 EKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEE-MRSVGCS--PTVVTY 296
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ LI A + A+ + +MV G P+ +T+ +L+
Sbjct: 297 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 335
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 140/358 (39%), Gaps = 68/358 (18%)
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M G + T LC GR D L +++ +E K ++ GL
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIE-----REDFKLDTVLCTHMISGLMEA 55
Query: 322 NQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ DEA+ +L +M P V + GF + KR + M+ EG PN ++
Sbjct: 56 SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLF 115
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ--------------- 424
+ L+H+YC E+ A +L+ MT G P +N + +C Q
Sbjct: 116 NSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 175
Query: 425 --------------------------GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
G A +L++E MR +G +P + YS +I
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMR---KGFVPDTSTYSKVITF 232
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC---LSQQTTWLLLLLLN-----E 508
LC + A +L +M G+ PD T+ L+ C L +Q WL + +
Sbjct: 233 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 292
Query: 509 MVSFVMVVHE-LSAKEKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
+V++ ++H L AK+ + N + H V G R +D T+ ++D + G++
Sbjct: 293 VVTYTALIHAYLKAKQ----VPQANDIFHRM--VDAGCRPNDVTYGALVDGLCKAGNI 344
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 57/318 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ ++ +I G +A I+ + +++ PS+ + S++D + K+ +DLA
Sbjct: 412 PNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 471
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ + TY ++ GLC KLL +M+ +G PN V Y LI L
Sbjct: 472 L-SQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 530
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCK------------------------ 159
K GK+ + L + M PN VT+ +LI C
Sbjct: 531 KAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQ 590
Query: 160 ---------EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
++ + +L +LE+ S+G VP +++ GR+ A+E+ +E E
Sbjct: 591 GYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650
Query: 211 QGR------------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
+V+ R EM R+G +P + + LI E
Sbjct: 651 VPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKW 710
Query: 253 DSALDVFNDMKIDGISWN 270
D AL + + +G++W
Sbjct: 711 DEALQLCYGICHEGVNWQ 728
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 221/497 (44%), Gaps = 64/497 (12%)
Query: 43 TPSLKIFNSILDVL-VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+PS+K N +++ L +DLAR + + + V D YTY +++K LC + F
Sbjct: 177 SPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAF 236
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV------------GRAR------------- 136
+L ++ G++P V YN L+ +LC++G+V GR R
Sbjct: 237 VMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGL 296
Query: 137 ----------SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+++ +ME PN+V ++ LI +C+E + AL L ++ S G V
Sbjct: 297 ARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTV 356
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGR-----------------LGKVKGGCRFLK 225
VT + + LC G + A +IL+E G G++ R ++
Sbjct: 357 VTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIR 416
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM + PN I C+ G + A +++ + G+ N T + LI GLC G
Sbjct: 417 EMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGN 476
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVD 343
+ + K+L+ M DS G + YN ++ + ++ +EA++ M K P
Sbjct: 477 NMKEATKVLKAMVDS--GVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFT 534
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ + +C G VED DQM EG P++V Y +I YC+ + V +A++ + E+
Sbjct: 535 FNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELI 594
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
+G P A +N ++ G R G++ A+ +++ G P Y+ L+ +C G
Sbjct: 595 KNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHN---GIQPTPITYNSLMYWMCHAG 651
Query: 464 GFQSASMLLVQMVGKGI 480
+ A + Q + K I
Sbjct: 652 LVEEAKEIFAQCILKNI 668
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 137/548 (25%), Positives = 235/548 (42%), Gaps = 77/548 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I+ L RA I+ + R + P++ +N ++D L + + AF
Sbjct: 214 PDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSG-RVEEAFQ 272
Query: 69 RKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M G ++ T+ IL+ GL R G+ +L M+ G+ PN VIYN LI C
Sbjct: 273 LKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHC 332
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV---- 179
+ G A L +M + VT++++ A CKE + +A +L++ G
Sbjct: 333 REGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCS 392
Query: 180 --------------------------------PDVVTITKVLELLCSVGRVMDAVEI--- 204
P+ +T ++ LC G+ +A EI
Sbjct: 393 LFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFL 452
Query: 205 ---------LEESGE------QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+ S QG +K + LK M G + TYNI+I C+
Sbjct: 453 VLGKGLGVNIATSNALIHGLCQG--NNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKA 510
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
++ A+ + +DM G + T++T +R C+ G+++D L +L M+ EG K I
Sbjct: 511 SKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKS--EGLKPDIV 568
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
Y +++ G + +A +YL ++ K L P AV + I G+ +G++ DA D M
Sbjct: 569 TYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTM 628
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
G P + Y+ L++ C V EA E+ + + ++ G C+ G +
Sbjct: 629 KHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKI 688
Query: 428 GTALKLVEE----DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
A+ +E D+R P Y+ L+ A C+ G + A L +MV GI+PD
Sbjct: 689 DEAVMYFKEMHYRDIR-------PNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741
Query: 484 YLTWNSLL 491
+++N+L+
Sbjct: 742 TVSYNTLI 749
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 192/404 (47%), Gaps = 38/404 (9%)
Query: 12 SIFITVI----RGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
S+F +V+ RG GR ++ +++ ++V+RF + P+ + + + L K A
Sbjct: 392 SLFNSVVAWHLRGTGRLDVVLRLIR--EMVARF-LKPNDAVMTACIQELCKRGKHEEAAE 448
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++ G+ + T L+ GLC N + + K+L M GV+ + + YN +I C
Sbjct: 449 IWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCC 508
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K K+ A L DM +P+ TF+ + AYC + + L LL++ S G PD+V
Sbjct: 509 KASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIV 568
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C V A ++L E+ + G PN YN LI
Sbjct: 569 TYGTIIDGYCKAKDVHKAN-------------------KYLIELIKNGLRPNAVIYNALI 609
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ--LMEDSK 301
Y G + A+ V + MK +GI +TY++L+ +C G +++ +I ++++ +
Sbjct: 610 GGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIE 669
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVED 359
G G Y ++ G + + DEA+ Y K+M + P + + + +C GN E+
Sbjct: 670 LGVIG----YTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEE 725
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
A + FD+M+ G VP+ V Y+ LI C+ + + + E EM+
Sbjct: 726 AFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 205/497 (41%), Gaps = 70/497 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARA 66
P F +I GL R + +V + F +TP+ I+N ++ +E + R
Sbjct: 284 PSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRL 343
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCL--------------------------------- 93
F +M++ G++ TY ++ K LC
Sbjct: 344 F--DEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWH 401
Query: 94 ---TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL----MSDMEEPN 146
T R+ +L+ M +R +KPN + I LCK GK A + + N
Sbjct: 402 LRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN 461
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
T + LI C+ N+ A +L+ G D +T +++ C ++ +A+++ +
Sbjct: 462 IATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRD 521
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+ M ++G P++ T+N + +YC G ++ L + + MK +G
Sbjct: 522 D-------------------MIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG 562
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ + VTY T+I G C + K L+E K G + YN+++ G R +
Sbjct: 563 LKPDIVTYGTIIDGYCKAKDVHKANK--YLIELIKNGLRPNAVIYNALIGGYGRNGSISD 620
Query: 327 ALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A+ L M+ + P + + + C G VE+AK F Q I + V+ Y +I
Sbjct: 621 AIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQ 680
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+C+ ++ EA KEM P T+ T++ C+ GN A KL +E + G
Sbjct: 681 GFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDE---MVSSG 737
Query: 445 SLPGSGHYSPLIKALCE 461
+P + Y+ LI CE
Sbjct: 738 IVPDTVSYNTLISGCCE 754
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 148/336 (44%), Gaps = 45/336 (13%)
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG--ISWNFVTYDTLIRGLCS 283
E+ +G P++ T NIL+ + G LD A VF +M+ DG ++ + TY +I+ LC
Sbjct: 170 ELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMR-DGNAVAPDVYTYTVMIKALCR 228
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
G ID +L +E S G + + YN ++ L R + +EA + +M +L P
Sbjct: 229 AGEIDAAFVMLAELERS--GIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSI 286
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V + I G + +M G PN VIY+ LI +C+E EA L E
Sbjct: 287 VTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDE 346
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-------------------DMRGIG 442
M G T+N + LC++G + A ++++E +RG G
Sbjct: 347 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTG 406
Query: 443 RGSL--------------PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
R + P + I+ LC++G + A+ + ++GKG+ + T N
Sbjct: 407 RLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSN 466
Query: 489 SLLICLSQ-----QTTWLLLLLLNEMVSFVMVVHEL 519
+L+ L Q + T +L +++ V F + + +
Sbjct: 467 ALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNI 502
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 8/266 (3%)
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G L A D F ++ G S + T + L+ L GG++D K+ M D + +
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPD-VY 217
Query: 310 PYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
Y ++ L R + D A L ++E+ + P V ++ + C G VE+A + +M
Sbjct: 218 TYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM 277
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+E P++V + LI+ + +R E +++EM G G P +N ++ CR+G+
Sbjct: 278 VEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHC 337
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
AL+L +E + +G Y+ + KALC++G + A +L +M+ G+ +
Sbjct: 338 SEALRLFDE---MVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLF 394
Query: 488 NSLLICLSQQTTWL--LLLLLNEMVS 511
NS++ + T L +L L+ EMV+
Sbjct: 395 NSVVAWHLRGTGRLDVVLRLIREMVA 420
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 185/390 (47%), Gaps = 27/390 (6%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVL 169
P + ++N ++ SL KN + SL E P+ T SILI +C ++ A +
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------R 213
G+ P+ +T+ +++ LC G + A+ ++ QG +
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178
Query: 214 LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
G+ K R L+++E P++ Y +I C+ +L A D++++M + GIS N T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y TLI G C G + + +L M+ + + +N ++ L +E + DEA+ ++
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMK--LKNINPDVYTFNILIDALAKEGKIDEAMSLFEE 296
Query: 334 ME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M+ +FP V + I G C + ++E A +M E+G PNV Y L+ A C+ R
Sbjct: 297 MKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGR 356
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+ A + + + GY T+N +++GLC+ G G + L + M G+G +P +
Sbjct: 357 LENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL-KSKME--GKGCMPNAIT 413
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+ +I AL EK A L +M+ +G+L
Sbjct: 414 FKTIICALLEKDENDKAEKFLREMIARGLL 443
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 184/438 (42%), Gaps = 64/438 (14%)
Query: 35 DLVSRFNM------TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
D V+ FN P +FN+IL LVK K+ +G+ D T +IL+
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEE 144
C + F + + RG PN++ NTLI LC G++ RA +++ +
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+ V++ LI CK LL K PD+V T ++ LC + DA ++
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223
Query: 205 LEESGEQGR----------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
E +G +G +K L EM+ K P+V T+NILI + +
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
G +D A+ +F +MK + N VTY +LI GLC ++ + + + M++ +G + +
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE--QGIQPNV 341
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
Y +L L C G +E+AK+ F ++
Sbjct: 342 YSYTILLDAL---------------------------------CKGGRLENAKQFFQHLL 368
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+G NV Y+ +I+ C+ + +L +M G G +P A TF T++ L +
Sbjct: 369 VKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDEND 428
Query: 429 TALKLVEEDMRGIGRGSL 446
A K + E I RG L
Sbjct: 429 KAEKFLRE---MIARGLL 443
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 38/264 (14%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P +N ++SS + + + +F + +GI+ + T LI C I +
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCV 353
+ ++L Y P A+ + I G C
Sbjct: 119 -----------------FANILKRGYH------------------PNAITLNTLIKGLCF 143
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G ++ A D+++ +G + V Y LI+ C+ + + L++++ GH P
Sbjct: 144 CGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVM 203
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+ T++ LC+ +G A L E I +G P Y+ LI C G + A LL
Sbjct: 204 YTTIIHCLCKNKLLGDACDLYSE---MIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLN 260
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ 497
+M K I PD T+N L+ L+++
Sbjct: 261 EMKLKNINPDVYTFNILIDALAKE 284
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 235/531 (44%), Gaps = 51/531 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
+E + +I+ L +A ++ + + R + P++ +N ++D L K + AF
Sbjct: 10 NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSG-RVEEAFRL 68
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K +M G+ T+ IL+ GL R G+ +L M+ GV PN VIYN LI C+
Sbjct: 69 KGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCR 128
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV----- 179
G +A L +M +P VT++++ A CKE + A +LE S G
Sbjct: 129 KGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL 188
Query: 180 -------------------------------PDVVTITKVLELLCSVGRVMDAVEILEES 208
P+ +T + LC G+ +AV I ++
Sbjct: 189 FNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 248
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
+G+ +K + ++ M KG + TYNI+I C+ ++ A+ + DM G
Sbjct: 249 LNKGKY--MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFK 306
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ T++TL+ C+ G++++ +L M+ EG + I Y +++ G + +A
Sbjct: 307 PDLFTFNTLLHAYCNLGKMEETFHLLDQMKT--EGLQPDIVSYGTIIDGHCKAKDIRKAK 364
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
EYL ++ L P + I G+ +G++ A + M G P V Y L++
Sbjct: 365 EYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWM 424
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C V EA + + + + ++ G C+ G + A+ EE MR RG
Sbjct: 425 CHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEE-MRS--RGIS 481
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P Y+ L+ A + G + AS L +MVG G++PD +T+ +L+ S++
Sbjct: 482 PNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEK 532
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 179/417 (42%), Gaps = 77/417 (18%)
Query: 35 DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCL 93
D++S MT +FN+++ L++ L +M+ G++ +D M+ LC
Sbjct: 176 DMLS-IGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCK 234
Query: 94 TNR----VGDGFKLLH-------------VMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
+ VG FK L+ M ++G++ +S+ YN +I CK+ K+ A
Sbjct: 235 GGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 294
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
L DM +P+ TF+ L+ AYC + LL++ + G PD+V+ +++
Sbjct: 295 KLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGH 354
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C + A E +L E+ +G PNV YN LI Y G +
Sbjct: 355 CKAKDIRKAKE-------------------YLTELMDRGLKPNVFIYNALIGGYGRNGDI 395
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A+D MK +GI VTY +L+ +C G L+E++K
Sbjct: 396 SGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG----------LVEEAK----------- 434
Query: 313 SVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
++ REN D + + ++ I G+C G + +A F++M G
Sbjct: 435 -TIFSQARENNVDLGV-------------IGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 480
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
PN + Y L++AY + EAS+L EM G G +P T+ T+++ +G T
Sbjct: 481 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGKTT 537
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 183/441 (41%), Gaps = 79/441 (17%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
+SR V N Y +I +LCK GKV +++++ +P VT+++L+ A CK +
Sbjct: 3 ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A L + G P VVT G +++ + E GE G +
Sbjct: 63 EEAFRLKGRMEQGGMTPSVVTF----------GILINGLARGERFGEVGIV--------- 103
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+EME+ G PN YN LI +C G AL +F++M + + VTY+ + + LC
Sbjct: 104 LQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCK 163
Query: 284 GGRIDDGLKILQLMED------------------------------SKEGSKGRISPYNS 313
G ++ +IL+ M + E + P +
Sbjct: 164 EGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDP 223
Query: 314 VLYGLYRE----NQQDEAL----------EYLKQMEKLFPRAVDRSLK---------ILG 350
++ RE + EA+ +Y+K+ K+ +++ ++ I G
Sbjct: 224 LMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRG 283
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C D +E+A + M G P++ ++ L+HAYC ++ E L+ +M G P
Sbjct: 284 CCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPD 343
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
++ T++ G C+ ++ A + + E M RG P Y+ LI G A
Sbjct: 344 IVSYGTIIDGHCKAKDIRKAKEYLTELM---DRGLKPNVFIYNALIGGYGRNGDISGAID 400
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+ M GI P +T+ SL+
Sbjct: 401 AVETMKSNGIQPTNVTYGSLM 421
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 40/247 (16%)
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
++ N +Y +I+ LC G++D G ++L L+R Q
Sbjct: 7 VALNEYSYTAMIKALCKAGKVDAGFEMLA---------------------ELWRAGLQ-- 43
Query: 327 ALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
P V ++ + C G VE+A R +M + G P+VV + LI+
Sbjct: 44 ------------PTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGL 91
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ ER E +++EM G P +N ++ CR+G+ AL+L +E + +
Sbjct: 92 ARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDE---MVLKKMK 148
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL--LLL 504
P + Y+ + KALC++G + A +L M+ G+ +N+++ L Q+T L ++
Sbjct: 149 PTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVS 208
Query: 505 LLNEMVS 511
+ NEMV+
Sbjct: 209 ITNEMVT 215
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 196/416 (47%), Gaps = 24/416 (5%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D + Y ++ G C ++R +++ MK RG P+ V YN LI SLC GK+ A +M
Sbjct: 145 DSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVM 204
Query: 140 SDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+ E P +T++ILI A ++ +A+ LL++ S G PD+ T ++ +C
Sbjct: 205 DQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKR 264
Query: 196 GRVMDAVEILEESGEQGRL-------------GKVKGGCRFLKEMERKGCLPNVDTYNIL 242
G V A E + L G+ + G R + +M KGC PN+ TY++L
Sbjct: 265 GLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVL 324
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
ISS C G A+DV MK G++ + YD LI C G++D + + M +
Sbjct: 325 ISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISA-- 382
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDA 360
G I YN+++ L ++ + DEAL K++E++ P A + G+ A
Sbjct: 383 GWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRA 442
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+M+ G P+ + Y+ LI + C++ V EA L+ +M + P ++N VL G
Sbjct: 443 LTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLG 502
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
LC+ + A++++ + G P Y+ L++ + G A L +V
Sbjct: 503 LCKAHRIVDAIEVLAV---MVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLV 555
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 192/411 (46%), Gaps = 32/411 (7%)
Query: 91 LCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PND 147
LC T + + L M RG KP+ ++ LI L + + +A +M +E+ P+
Sbjct: 87 LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGDPDS 146
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
++ +I +C+ + A ++ + GF PDVVT ++ LC+ G++ A++++++
Sbjct: 147 FAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQ 206
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
E C P V TY ILI + G +D A+ + ++M G+
Sbjct: 207 LLED-------------------NCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGL 247
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ TY+ ++RG+C G +D + + + + + + + G + ++ +
Sbjct: 248 QPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMS 307
Query: 328 LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
+K E P V S+ I C DG +A M E+G P+ YD LI A+C
Sbjct: 308 DMIVKGCE---PNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFC 364
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE--EDMRGIGRGS 445
+E +V A + +M G+LP +NT++ LC++G AL + + E++ G
Sbjct: 365 KEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEV-----GC 419
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
P + Y+ + AL G A ++++M+ G+ PD +T+NSL+ L +
Sbjct: 420 PPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCR 470
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 151/326 (46%), Gaps = 55/326 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++RG+ + +++ +A + VS N TPSL ++N +L L+ E A
Sbjct: 249 PDMYTYNVIVRGMCKRGLVD---RAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERL 305
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M+ G + + TY++L+ LC + G+ +L VMK +G+ P++ Y+ LI + CK
Sbjct: 306 MSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCK 365
Query: 129 NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
GKV A + DM S G++PD+V +
Sbjct: 366 EGKVDLAIGFVDDM-------------------------------ISAGWLPDIVNYNTI 394
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC GR +A+ I K++E GC PN +YN + +
Sbjct: 395 MGSLCKKGRADEALNI-------------------FKKLEEVGCPPNASSYNTMFGALWS 435
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+G AL + +M +G+ + +TY++LI LC G +D+ + +L ME ++ + +
Sbjct: 436 SGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEW--QPTV 493
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM 334
YN VL GL + ++ +A+E L M
Sbjct: 494 ISYNIVLLGLCKAHRIVDAIEVLAVM 519
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 39/295 (13%)
Query: 237 DTYNI-LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
DT+++ ++ C+TG AL M G + + LI+GL + R + +++++
Sbjct: 77 DTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVME 136
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
++E + G + YN+V+ G R ++ D A + +M+ P V ++ I C
Sbjct: 137 ILE--QYGDPDSFA-YNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCA 193
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G ++ A + DQ++E+ P V+ Y LI A + +A L+ EM G P T
Sbjct: 194 RGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYT 253
Query: 414 FNTVLSGLCRQGNVGTALKLVEE-------------------------------DMRGIG 442
+N ++ G+C++G V A + V DM I
Sbjct: 254 YNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDM--IV 311
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G P YS LI +LC G A +L M KG+ PD ++ L+ ++
Sbjct: 312 KGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKE 366
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
R + + L L + + EAL +L+QM K P + + I G E A R
Sbjct: 76 RDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVM 135
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+++E+ G P+ Y+ +I +C+ +R A+ ++ M G+ P T+N ++ LC +
Sbjct: 136 -EILEQYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCAR 194
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + ALK++++ + P Y+ LI+A G A LL +M+ +G+ PD
Sbjct: 195 GKLDLALKVMDQLLED---NCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDM 251
Query: 485 LTWNSLL 491
T+N ++
Sbjct: 252 YTYNVIV 258
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 20/145 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSIL-----DVLVKE 59
PP+ S + T+ L + D ++A ++ + P +NS++ D +V E
Sbjct: 420 PPNASSYNTMFGALWSS---GDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDE 476
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
I L R + + + +Y I++ GLC +R+ D ++L VM G +PN Y
Sbjct: 477 AIGLLVDMERTEWQPTVI-----SYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTY 531
Query: 120 NTLIHSLCKNG----KVGRARSLMS 140
L+ + G V A+SL+S
Sbjct: 532 TLLVEGVGYAGWRSYAVELAKSLVS 556
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 212/431 (49%), Gaps = 40/431 (9%)
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----E 144
KG LTN F H++ + P V ++ L+ +L + G SL +E E
Sbjct: 58 KGCSLTNIEDALFSFNHMIHKHPL-PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIE 116
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
+ F+ILI + + + + A +L K GF PD VT + ++ LC + A+E
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176
Query: 205 LEE---SGEQGRLGK----VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCE 248
+E SG Q L +KG C+ LK+M++ G P++ YN +I C+
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI------LQLMEDSKE 302
++ ALD+F+++K G+ + TY L+ GLC+ + ++ + L +M D
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPD--- 293
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EK-LFPRAVDRSLKILGFCVDGNVEDA 360
+ +N ++ L +E EA +K M EK + P + + G+C+ V +A
Sbjct: 294 -----VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEA 348
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ FD MI +G +PNVV Y+ LI+ YC+ +R+ EA EL EM+ G +P +NT++SG
Sbjct: 349 RMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISG 408
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC+ G A +L +DM+ +G P + L+ +LC+ G +A L M +
Sbjct: 409 LCQAGRHCEARELF-KDMQ--AQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCL 465
Query: 481 LPDYLTWNSLL 491
P+ +T++ L+
Sbjct: 466 KPNLVTYDILI 476
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 176/379 (46%), Gaps = 29/379 (7%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKM 72
F +I R + ++ + + P F+S+++ L ED ARA + +M
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFED-KFARAMEFFDEM 180
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ASG Q + +TY ++KG C + LL M G +P+ VIYNT+I LCK+ V
Sbjct: 181 VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLV 240
Query: 133 GRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A + S+++ P+ T+SIL+ C + A L + S +PDVVT +
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
++ LC ++G L + +G +K M KG PN TYN L++ YC
Sbjct: 301 VDKLC----------------KEGMLSEAQG---IIKIMIEKGVEPNYATYNSLMNGYCL 341
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ A VF+ M G N V+Y+ LI G C RID+ ++ M S G
Sbjct: 342 QNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM--SFRGLIPNT 399
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN+++ GL + + EA E K M+ P V ++ + C G +++A R F
Sbjct: 400 FNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRA 459
Query: 367 MIEEGGVPNVVIYDCLIHA 385
M + PN+V YD LI A
Sbjct: 460 MQDSCLKPNLVTYDILIRA 478
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 152/302 (50%), Gaps = 26/302 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLAR 65
P+ + T+I+G + I A L+ + + P + I+N+I+D L K+ +
Sbjct: 187 PNLHTYNTIIKGFCK---IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEA 243
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
++ GV+ D +TY+ILM GLC +++ + L + M S + P+ V +N L+
Sbjct: 244 LDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDK 303
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK G + A+ ++ M EPN T++ L+ YC + + A ++ + + G +P+
Sbjct: 304 LCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPN 363
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK-------VKGGCR---------FLK 225
VV+ ++ C R+ +A E+ +E +G + + G C+ K
Sbjct: 364 VVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFK 423
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
+M+ +GC P++ T IL+ S C+ G LD+AL +F M+ + N VTYD LIR + G
Sbjct: 424 DMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
Query: 286 RI 287
+I
Sbjct: 484 KI 485
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 187/434 (43%), Gaps = 31/434 (7%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-E 59
H I P I F ++ L R + V+ + + + + FN +++ + +
Sbjct: 74 HMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQ 133
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A + K++ G + D T++ L+ GLC ++ + M + G +PN Y
Sbjct: 134 RVDFAFSVL-GKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTY 192
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NT+I CK GK A L+ M++ P+ V ++ +I CK+ + AL + +
Sbjct: 193 NTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKG 252
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G PDV T + ++ LC+ + +A + E M +P+
Sbjct: 253 KGVRPDVFTYSILMHGLCNSDQKEEASALFNE-------------------MMSLNIMPD 293
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
V T+NIL+ C+ G+L A + M G+ N+ TY++L+ G C ++ + +
Sbjct: 294 VVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFD 353
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCV 353
M +G + YN ++ G + + DEA E +M L P + + I G C
Sbjct: 354 AM--ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ 411
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G +A+ F M +G P++V L+ + C+ + A L + M P T
Sbjct: 412 AGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVT 471
Query: 414 FNTVLSGLCRQGNV 427
++ ++ + + G +
Sbjct: 472 YDILIRAMYKSGKI 485
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 146/286 (51%), Gaps = 7/286 (2%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
RL +V L ++ + G P+ T++ LI+ C A++ F++M G N
Sbjct: 131 RLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLH 190
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY+T+I+G C G+ + +L+ M+ K G + I YN+++ GL ++ EAL+
Sbjct: 191 TYNTIIKGFCKIGKTTVAVGLLKKMD--KAGGRPDIVIYNTIIDGLCKDRLVSEALDIFS 248
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+++ + P S+ + G C E+A F++M+ +P+VV ++ L+ C+E
Sbjct: 249 EIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEG 308
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EA ++K M G P +T+N++++G C Q V A ++V + M I +G +P
Sbjct: 309 MLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEA-RMVFDAM--ITKGCMPNVV 365
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
Y+ LI C+ A L +M +G++P+ +N+L+ L Q
Sbjct: 366 SYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQ 411
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL-ARAF 67
P+ + +I G +A+ I++ + D +S + P+ +N+++ L + AR
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K M A G D T IL+ LC + + +L M+ +KPN V Y+ LI ++
Sbjct: 422 F-KDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMY 480
Query: 128 KNGKVGR 134
K+GK+ R
Sbjct: 481 KSGKIYR 487
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 216/477 (45%), Gaps = 34/477 (7%)
Query: 42 MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
++P+ + ++D + +LA AF+ +++ +G++ + L++G C R +
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFF-GQLLRTGLRVNIIIANHLLEGFCEAKRTDEA 168
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSIL 153
LLH G P+ Y+ L+ SLC GK G+A L+ M E PN V ++ +
Sbjct: 169 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTV 228
Query: 154 ICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR 213
I + KE ++ A L ++ G PD+VT V+ LC R MD E R
Sbjct: 229 IDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAMDKAEAFLRQMVNKR 287
Query: 214 L-----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
+ G+ K R KEM R LP+V T ++L+ S C+ G + A
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 347
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
DVF+ M + G + + +Y+ ++ G + G + D + LM +G +N ++
Sbjct: 348 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM--LGDGIAPDFYTFNVLIK 405
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
D+A+ +M + P V I C G ++DA F+QMI++G P
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAP 465
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ Y+CLI +C + +A EL+ E+ +G F+++++ LC+ G V A +
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + G P + Y+ L+ C G + A + MV GI P+ + + +L+
Sbjct: 526 D---LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 207/482 (42%), Gaps = 67/482 (13%)
Query: 71 KMMASG---VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+MMA G + Y ++ G V L M RG+ P+ V YN+++H+LC
Sbjct: 209 RMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALC 268
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + +A + + M PN+ T++ LI Y A+ + ++ +PDVV
Sbjct: 269 KARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVV 328
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL---------- 233
T++ ++ LC G++ +A ++ + +G+ V L KGCL
Sbjct: 329 TLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLM 388
Query: 234 ------PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
P+ T+N+LI +Y G+LD A+ +FN+M+ G+ + VTY T+I LC G++
Sbjct: 389 LGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKM 448
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----------- 336
DD ++ M D +G YN ++ G +A E + ++
Sbjct: 449 DDAMEKFNQMID--QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFS 506
Query: 337 --------------------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
L P AV ++ + G+C+ G +E A R FD M+
Sbjct: 507 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 566
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG-NVGT 429
G PNVV Y L++ YC+ R+ E L +EM G P ++ ++ GL G V
Sbjct: 567 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPA 626
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
+K E GI Y+ +++ L + F A L ++ + + +T N+
Sbjct: 627 KMKFHEMTESGIAMDICT----YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682
Query: 490 LL 491
++
Sbjct: 683 MI 684
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 181/395 (45%), Gaps = 37/395 (9%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M+ G+ D YT+ +L+K + + + M+ GVKP+ V Y T+I +LC+ GK
Sbjct: 388 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A + M + P+ ++ LI +C +L+ A L+ + + G D+V +
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507
Query: 188 VLELLCSVGRVMDAVEILEESGEQGR----------------LGKVKGGCRFLKEMERKG 231
++ LC +GRVMDA I + + G +GK++ R M G
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PNV Y L++ YC+ G +D L +F +M GI + + Y +I GL GR
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI--L 349
++ E ++ G I YN VL GL++ DEA+ K++ RA++ + I L
Sbjct: 628 --MKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL-----RAMNVKINIITL 680
Query: 350 GFCVDG-----NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+DG VE+AK F + VP+VV Y +I +E V EA ++ M
Sbjct: 681 NTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740
Query: 405 HGYLPIASTFNTVLSGLCRQGNV---GTALKLVEE 436
G P + N V+ L ++ + G L ++E
Sbjct: 741 AGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE 775
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 194/464 (41%), Gaps = 73/464 (15%)
Query: 63 LARAFYRKKMMASGVQGD------DYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
LA A + + AS QG +TYAILM +R + G++ N
Sbjct: 92 LAVALFNRA--ASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNI 149
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
+I N L+ C+ + A +LL ++
Sbjct: 150 IIANHLLEGFCEAKRTDEALD------------------------------ILLHRTPEL 179
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G VPDV + + +L+ LC G+ A ++L E G + C PNV
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV-----------------CSPNV 222
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
YN +I + + G ++ A D+F +M GI + VTY++++ LC +D L+
Sbjct: 223 VAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQ 282
Query: 297 MEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
M + R+ P YN+++YG Q EA+ K+M + + P V S+ +
Sbjct: 283 MVNK------RVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 336
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G +++A+ FD M +G P+V Y+ +++ Y + + + ++L M G G P
Sbjct: 337 LCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPD 396
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
TFN ++ G + A+ + E MR G P Y +I ALC G A
Sbjct: 397 FYTFNVLIKAYANCGMLDKAMIIFNE-MR--DHGVKPDVVTYRTVIAALCRIGKMDDAME 453
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVM 514
QM+ +G+ PD +N L+ + LL E++S +M
Sbjct: 454 KFNQMIDQGVAPDKYAYNCLIQGFCTHGS---LLKAKELISEIM 494
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 158/353 (44%), Gaps = 34/353 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F +I+ M++ + + + + P + + +++ L + +D A
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ GV D Y Y L++G C + +L+ + + G+ + V ++++I++LC
Sbjct: 455 F-NQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLC 513
Query: 128 KNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G+V A+++ D+ P+ V +++L+ YC + AL + + S G P+V
Sbjct: 514 KLGRVMDAQNIF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV 572
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
V ++ C +GR+ + + + E ++G G+ E
Sbjct: 573 VGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHE 632
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M G ++ TYNI++ + D A+ +F +++ + N +T +T+I G+ R
Sbjct: 633 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 692
Query: 287 IDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQME 335
+++ + + S+ R+ P Y+ ++ L +E +EA + M+
Sbjct: 693 VEEAKDLFASI------SRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 739
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 70/142 (49%), Gaps = 10/142 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDLA 64
D + V+RGL + R ++ + + N+ ++ N+++D + V+E DL
Sbjct: 641 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 700
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ R +++ S V TY+I++ L V + + M++ G +PNS + N ++
Sbjct: 701 ASISRSRLVPSVV-----TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 755
Query: 125 SLCKNGKVGRARSLMSDMEEPN 146
L K ++ RA + +S ++E N
Sbjct: 756 ELLKKNEIVRAGAYLSKIDERN 777
>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
Length = 703
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 235/510 (46%), Gaps = 70/510 (13%)
Query: 1 MPHS-IQSPPDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVK 58
MP S +Q PD + ++ G +A V++ D LV P+L +N +LD L K
Sbjct: 219 MPRSGVQ--PDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCK 276
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
++M+A+ +Q D TY IL+ GLC + V ++ + G+ ++ +
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336
Query: 119 YNTLIHSLCKNGKVGRA------------RSLMS---------------------DMEE- 144
YN+L+ C+ G+V A R+L + D+ E
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396
Query: 145 -----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
P+ VTF LI C+ A + E++ G DV + + ++ LC+VGR++
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
DAV++ E+ M++ GC PN YN LIS +C+ A+ ++
Sbjct: 457 DAVKVYEK-------------------MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIY 497
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M +G S +TY+TLI GLC + + + + M ++ G I+ Y S++ GL+
Sbjct: 498 SKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN--GFTPDITTYGSLIRGLF 555
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP-NV 376
+ + D+AL KQ+ + L + ++ I G C G V++A F M E+ P N+
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
V Y+ L+ + + +A+ L +T G P ++NT + GLC + ++L++E
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ RG +P ++ L++A+ + G Q
Sbjct: 676 VL---SRGIIPTVITWNILVRAVIKYGPIQ 702
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 217/508 (42%), Gaps = 66/508 (12%)
Query: 11 ESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES + V+ RA M + + A L S P ++ N++LD V+ AR F
Sbjct: 83 ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVR-----ARRF-- 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
D +A L H R + PN YN ++ SLC
Sbjct: 136 --------SDADAFFA----------------SLSHGAFGRRIAPNLQTYNIVLRSLCAR 171
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + RA +L + P+ +T+S L+C K++ L +AL LL++ G PDVV
Sbjct: 172 GDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCY 231
Query: 186 TKVLELLCSVG------RVMDAVEILEESGEQGRLGK----VKGGCRF---------LKE 226
+L G RV D +++++ G + L + G C+F +
Sbjct: 232 NALLGGCFKAGEFEKVMRVWD--KLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M P+V TY ILI C +G +D A V++++ G+ + Y++L++G C GR
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVD 343
+ + K + + + YN ++ GL+ DEA+E +EK P V
Sbjct: 350 VQEAWK---FWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVT 406
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
I G C +G A F++ G +V Y +I+ C R+ +A ++ ++M
Sbjct: 407 FGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMD 466
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P + +N ++SG C+ A+++ + G P Y+ LI LC+
Sbjct: 467 KDGCKPNSHIYNALISGFCQVYRTSDAVRIYS---KMADNGCSPTVITYNTLIDGLCKAE 523
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
+Q AS + +MV G PD T+ SL+
Sbjct: 524 KYQEASSVAREMVENGFTPDITTYGSLI 551
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/541 (24%), Positives = 226/541 (41%), Gaps = 101/541 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + V+R L ++ V D + R + P +++++ L K+D +D A
Sbjct: 156 PNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDL 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV----MKSRGVKPNSVIYNTLI 123
+M SGVQ D Y L+ G C + G+ K++ V +K G +PN YN ++
Sbjct: 216 L-DEMPRSGVQPDVVCYNALLGG-CF--KAGEFEKVMRVWDKLVKDPGARPNLATYNVML 271
Query: 124 HSLCKNGK---VGRA-RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCK G+ VG ++++ +P+ +T+ ILI C+ ++ A + + G V
Sbjct: 272 DGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLV 331
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRFL 224
D +++ C GRV +A + + +G G G V
Sbjct: 332 IDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW 391
Query: 225 KEMERK-GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+E+ C+P+ T+ LI C+ G + A +F + ++ G + +Y ++I GLC+
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
GR+ D +K+ + M+ K+G K YN++
Sbjct: 452 VGRLVDAVKVYEKMD--KDGCKPNSHIYNAL----------------------------- 480
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
I GFC DA R + +M + G P V+ Y+ LI C+ E+ +EAS + +EM
Sbjct: 481 ----ISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMV 536
Query: 404 GHGYLPIASTF-----------------------------------NTVLSGLCRQGNVG 428
+G+ P +T+ N ++ GLC G V
Sbjct: 537 ENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVD 596
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL V DM+ + P Y+ L+ L E G A+ L + G+ PD +++N
Sbjct: 597 EALH-VFSDMKE-KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYN 654
Query: 489 S 489
+
Sbjct: 655 T 655
>gi|356513749|ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 216/486 (44%), Gaps = 64/486 (13%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYA 85
++ + + + RF P+ + ++ L K+ DL + ++M GV Y +A
Sbjct: 211 VDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKG-DLKQPLCVFEEMERVGVIPHSYCFA 269
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
++GLC +R G+++L + Y ++ C K+ A+ + DME
Sbjct: 270 AYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQ 329
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ +S LI YCK NL+ AL L ++ S G + V ++ +L L +G ++
Sbjct: 330 GVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEV 389
Query: 202 VEILEESGEQGR----------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
V+ +E E G LGKV+ ++EM+ K +V Y LI+
Sbjct: 390 VDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLING 449
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
YC G L +A ++F +MK G+ + VTY+ L GL G + +K+L ME +G K
Sbjct: 450 YCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMES--QGMK 507
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
P + + I G C G V +A+ F+
Sbjct: 508 ---------------------------------PNSTTHKMIIEGLCSGGKVLEAEVYFN 534
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+ ++ N+ IY +++ YC+ + V+++ E+ ++ G + ++ +LS LC G
Sbjct: 535 SLEDK----NIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTG 590
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
++ A+KL++ R + P YS ++ ALC+ G ++A L V +G PD +
Sbjct: 591 DIEKAVKLLD---RMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVV 647
Query: 486 TWNSLL 491
T+ ++
Sbjct: 648 TYTIMI 653
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 167/383 (43%), Gaps = 39/383 (10%)
Query: 62 DLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
DL AF K+M G++ D TY +L GL + KLL M+S+G+KPNS +
Sbjct: 455 DLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHK 514
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+I LC GKV A + +E+ N +S ++ YC+ + + + + K + G +
Sbjct: 515 MIIEGLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMA 574
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE----SGEQGRL------------GKVKGGCRFL 224
+ K+L LC G + AV++L+ + E ++ G +K
Sbjct: 575 KKASCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLF 634
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+G P+V TY I+I+SYC L A D+F DMK GI + +T+ L
Sbjct: 635 DVFVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVL------- 687
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
+D LK S G + S Y S + L ++QM K+ P V
Sbjct: 688 --LDGSLKEYLGKRFSSHGKRKTTSLYVSTI------------LRDMEQM-KINPDVVCY 732
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ + G N + A FD+MIE G P+ + Y L+ C V +A L+ EM+
Sbjct: 733 TVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSS 792
Query: 405 HGYLPIASTFNTVLSGLCRQGNV 427
G P + + G+ + V
Sbjct: 793 KGMTPDVHIISALKRGIIKARKV 815
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 143/323 (44%), Gaps = 26/323 (8%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G +PDV+T + L G V A+ + E+ ++R G +PN
Sbjct: 190 GILPDVLTCNFLFNRLVEHGEVDKALAVYEQ-------------------LKRFGFIPNC 230
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY I+I + C+ G L L VF +M+ G+ + + I GLC+ R D G ++LQ
Sbjct: 231 YTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQA 290
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
K + + Y +V+ G E + DEA ME+ + P S I G+C
Sbjct: 291 FR--KGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKS 348
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
N+ A D+MI G N V+ C++H + E + KE+ G +
Sbjct: 349 HNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAY 408
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N V LC G V A+++VEE M+ G HY+ LI C +G +A + +
Sbjct: 409 NIVFDALCMLGKVEDAVEMVEE-MKSKRLGL--DVKHYTTLINGYCLQGDLVTAFNMFKE 465
Query: 475 MVGKGILPDYLTWNSLLICLSQQ 497
M KG+ PD +T+N L LS+
Sbjct: 466 MKEKGLKPDIVTYNVLAAGLSRN 488
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 185/387 (47%), Gaps = 33/387 (8%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNA 166
G P YN LI+ CK G + A+ + +++ + P V+F+ LI CK NL
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L + PDV T + ++ LC GR +D E L E
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGR-LDVAEQL------------------FDE 318
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M+++G PN T+ LI + +DSA++ ++ M G+ + V Y+TL+ GLC G
Sbjct: 319 MQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD 378
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
++ K++ M+ G K Y +++ G +E + A+E K M E + V
Sbjct: 379 VNKARKLVDEMK--MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAF 436
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I GFC DG V DA+R +M+E G P+ Y +I YC++ V+ +L+KEM
Sbjct: 437 TALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQI 496
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G+ P T+N +++GLC+QG + A L+E + G P Y+ L++ C+ G
Sbjct: 497 NGHKPGVITYNVLMNGLCKQGQMKNANMLLEA---MLNLGVTPDDITYNILLEGHCKNG- 552
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A LL KG++ DY + SL+
Sbjct: 553 --KAEDLLKLRNEKGLIVDYAYYTSLV 577
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 190/422 (45%), Gaps = 66/422 (15%)
Query: 40 FNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
+ P ++ +N +++ KE I A+ + ++ G++ ++ L+ GLC + +
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIF-NEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILI 154
+GF+L M+ + P+ Y+ LIH LCK G++ A L +M++ PN +TF+ LI
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
+ + +A+ + + G PD+V +L LC VG V A ++++
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD-------- 387
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
EM+ G P+ TY LI YC+ G L+SA+++ M +G+ + V +
Sbjct: 388 -----------EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAF 436
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
LI G C GR+ D + L+ M ++ G K
Sbjct: 437 TALISGFCRDGRVRDAERTLREMVEA--GMK----------------------------- 465
Query: 335 EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
P ++ I G+C GNV+ + +M G P V+ Y+ L++ C++ +++
Sbjct: 466 ----PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKN 521
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A+ L++ M G P T+N +L G C+ G LKL E +G + +Y+
Sbjct: 522 ANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE------KGLIVDYAYYTS 575
Query: 455 LI 456
L+
Sbjct: 576 LV 577
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 22/306 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P F T+I GL ++R +++ + + + P + ++ ++ L KE +D+A
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQL 315
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G++ + T+ L+ G + R+ H M + GVKP+ V+YNTL++ LC
Sbjct: 316 F-DEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLC 374
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V +AR L+ +M+ +P+ +T++ LI YCKE +L +A+ + + G V D V
Sbjct: 375 KVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNV 434
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ C GRV DA L E E G + G VK G + LKEM
Sbjct: 435 AFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEM 494
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G P V TYN+L++ C+ G + +A + M G++ + +TY+ L+ G C G+
Sbjct: 495 QINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKA 554
Query: 288 DDGLKI 293
+D LK+
Sbjct: 555 EDLLKL 560
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 73/339 (21%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F E+ G P V YNILI+ +C+ G + A +FN+++ G+ V+++TLI GLC
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269
Query: 283 SGGRIDDGLKILQLMEDS-----------------KEG------------SKGRISP--- 310
+D+G ++ + ME++ KEG + + P
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 311 -YNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ +++ G YR + D A+ QM + P V + + G C G+V A++ D+M
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 368 IEEGGVPNVVIYDCLIHAYCQE-----------------------------------ERV 392
G P+ + Y LI YC+E RV
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
R+A ++EM G P +T+ V+ G C++GNV KL++E G PG Y
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQIN---GHKPGVITY 506
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ L+ LC++G ++A+MLL M+ G+ PD +T+N LL
Sbjct: 507 NVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILL 545
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 142/324 (43%), Gaps = 26/324 (8%)
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
+GF P V ++ C G + DA I E + ++G P
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNE-------------------IRKRGLRPT 257
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
++N LI+ C++ LD + M+ + I + TY LI GLC GR+D ++
Sbjct: 258 TVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFD 317
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCV 353
M+ + G + + +++ G YR + D A+ QM + P V + + G C
Sbjct: 318 EMQ--QRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCK 375
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G+V A++ D+M G P+ + Y LI YC+E + A E+ K M G +
Sbjct: 376 VGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
F ++SG CR G V A + + E + G P Y+ +I C+KG + LL
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEA---GMKPDDATYTMVIDGYCKKGNVKMGFKLLK 492
Query: 474 QMVGKGILPDYLTWNSLLICLSQQ 497
+M G P +T+N L+ L +Q
Sbjct: 493 EMQINGHKPGVITYNVLMNGLCKQ 516
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 131/487 (26%), Positives = 227/487 (46%), Gaps = 40/487 (8%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
I+ V G R M V ATD + PS++ ++ ++ K D++ R+ M
Sbjct: 189 IYFLVKSGYDREAMEVYKVMATD-----GIVPSVRTYSVLMLAFGKRDVETVVWLLRE-M 242
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
GV+ + Y+Y I ++ L R + +K+L M+ G KP+ V LI LC G+V
Sbjct: 243 EDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRV 302
Query: 133 GRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSF-GFVPDVVTITK 187
A+ + M ++P+ VT+ I + C + +++ + + G+ +VV T
Sbjct: 303 SDAKDVFWKMKASDQKPDRVTY-ITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTA 361
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
V++ LC VGRV +A ++ ++ M++KG P +YN LIS +
Sbjct: 362 VVDALCQVGRVDEASDVFDQ-------------------MKQKGIEPQQYSYNSLISGFL 402
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ L+ AL++FN M I G + N TY I G +K +LM+ +G
Sbjct: 403 KADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYELMKS--KGIVPD 460
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ N+VLY L + + A +++ + P + ++ I N ++A + F
Sbjct: 461 VVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFS 520
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+MIE VP+V+ + LI + R EA ++ E+ P T+NT+L+GL R+G
Sbjct: 521 EMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREG 580
Query: 426 NVGTALKLVEEDMRGIGRGSLPGS-GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
V + L+EE + S P + Y+ ++ LC+ G A +L M KG +PD
Sbjct: 581 KVKEVMHLLEE----MNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDL 636
Query: 485 LTWNSLL 491
++N+ L
Sbjct: 637 SSYNTAL 643
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 131/554 (23%), Positives = 225/554 (40%), Gaps = 68/554 (12%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDI 61
SI PD + +I+ +A ++ +K + P + NS++D L K
Sbjct: 489 SIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGN 548
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
+ + F+ K M + D TY L+ GL +V + LL M S PN + YNT
Sbjct: 549 EAWKIFHELKEM--NLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNT 606
Query: 122 LIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
++ LCKNG+V A ++ +M P+ +++ + KE+ L A + +
Sbjct: 607 VLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMKKV- 665
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVE------------------------ILEESGEQGR 213
PD T+ +L G + +A+ IL+ +G +
Sbjct: 666 LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKS 725
Query: 214 L----------------------------GKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ K +K+ E G +YN LI
Sbjct: 726 IEFAENIALSRILLDDFFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICG 785
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ ++D A +F++MK G + TY+ ++ + RI+D LK+ + M +G +
Sbjct: 786 LVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMH--CKGYE 843
Query: 306 GRISPYNSVLYGLYRENQQDEALE-YLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKRC 363
YN+++ GL + EA++ Y K M + F P + G DG +EDA+
Sbjct: 844 STYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDL 903
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
FD+M++ G PN IY+ L++ Y + EL + M G P ++ ++ LC
Sbjct: 904 FDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCT 963
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G + +L + G P Y+ LI L G + A L M GI P+
Sbjct: 964 AGRLNDSLSYFRQLTE---LGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPN 1020
Query: 484 YLTWNSLLICLSQQ 497
T+NSL++ L ++
Sbjct: 1021 LYTYNSLILYLGKE 1034
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/539 (22%), Positives = 230/539 (42%), Gaps = 62/539 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + + T++ GLGR + +V+ + ++ + P+L +N++LD L K +++ A
Sbjct: 564 PTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGM 623
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G D +Y + GL +R+ + F++ MK + + P+ T++ S
Sbjct: 624 LYN-MTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFV 681
Query: 128 KNGKVGRA-RSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
KNG + A +L + +P + +F L+ K + ++ E + D
Sbjct: 682 KNGLMNEALHTLKEYILQPGSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDD 741
Query: 183 VTITKVLELLCSVGRVMDAVEILEE------SGEQGRLGKVKGGC----------RFLKE 226
++ ++ LC + ++A E++++ S + G + G E
Sbjct: 742 FFLSPLIRHLCKSKKALEAHELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSE 801
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL----- 281
M+R GC P+ TYN+++ + ++ ++ L V +M G +VTY+T+I GL
Sbjct: 802 MKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKM 861
Query: 282 --------------------CSGGRIDDGLKILQLMEDSKE--------GSKGRISPYNS 313
C+ G + DGL +ED+++ G K + YN
Sbjct: 862 LYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNI 921
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+L G ++ E + M + + P ++ I C G + D+ F Q+ E G
Sbjct: 922 LLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELG 981
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P+++ Y+ LIH + R+ EA L +M G P T+N+++ L ++G A
Sbjct: 982 LEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAG 1041
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
K+ EE ++ G P Y+ LI G +A QM+ G P+ T+ L
Sbjct: 1042 KMYEELLK---NGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQL 1097
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 172/410 (41%), Gaps = 31/410 (7%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFS 151
RV D ++ +M+ + VK N + T+ SL G + A + M+E N T++
Sbjct: 127 RVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYN 186
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI K A+ + + + G VP V T + ++ L R ++ V L
Sbjct: 187 GLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLM--LAFGKRDVETVVWL------ 238
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
L+EME G PNV +Y I I + G + A + M+ +G +
Sbjct: 239 ------------LREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDV 286
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
VT LI+ LC GR+ D + M+ S + R++ Y ++L +E
Sbjct: 287 VTNTVLIQILCDAGRVSDAKDVFWKMKASDQ-KPDRVT-YITLLDKCGDNGDSRSVIEIW 344
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
M+ V + + C G V++A FDQM ++G P Y+ LI + +
Sbjct: 345 NAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKA 404
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+R+ A EL M HG P T+ ++ G G +LK ++ +G +P
Sbjct: 405 DRLNHALELFNHMNIHGPTPNGYTYVLFIN---YYGKSGESLKAIKRYELMKSKGIVPDV 461
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
+ ++ +L + G A + ++ G+ PD +T+ ++ C S+ +
Sbjct: 462 VAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASN 511
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 124/279 (44%), Gaps = 8/279 (2%)
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
G+V+ + M+R+ NV T+ + S G L SA MK GI N TY
Sbjct: 126 GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTY 185
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ LI L G + +++ ++M + +G + Y SVL + + + + L++M
Sbjct: 186 NGLIYFLVKSGYDREAMEVYKVM--ATDGIVPSVRTY-SVLMLAFGKRDVETVVWLLREM 242
Query: 335 EK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
E + P ++ I G E+A + +M +EG P+VV LI C RV
Sbjct: 243 EDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRV 302
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
+A ++ +M P T+ T+L + G+ G + ++E G Y
Sbjct: 303 SDAKDVFWKMKASDQKPDRVTYITLLD---KCGDNGDSRSVIEIWNAMKADGYNDNVVAY 359
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ ++ ALC+ G AS + QM KGI P ++NSL+
Sbjct: 360 TAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLI 398
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I GLGR+ + + V + + + + P+L +NS++ L KE
Sbjct: 984 PDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKM 1043
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++++ +G + + +TY L+ G ++ + F M G PNS Y L + L
Sbjct: 1044 YEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQLPNQL 1101
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 234/516 (45%), Gaps = 36/516 (6%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
+S P + T+I G G A ++ + R PS+ +N IL L ++ +
Sbjct: 338 RSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKG-KVEE 396
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A M + TY IL+ LC + K+ MK G+ PN + N +I
Sbjct: 397 ALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDR 456
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK K+ A S+ ++ P+ TF LI + + +A L EK +P+
Sbjct: 457 LCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPN 516
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
VV T +++ GR D +I +E +G + G+V+ G +
Sbjct: 517 VVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFE 576
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
E++ +G +P+V +Y+ILI + G +F +MK G+ + + Y+T+I G C G
Sbjct: 577 EIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSG 636
Query: 286 RIDDGLKILQLMEDSK-EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
++D K QL+E+ K +G + + Y SV+ GL + ++ DEA ++ + + VD
Sbjct: 637 KVD---KAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSI---GVDL 690
Query: 345 SLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
++ I +D G +++A ++++++G PN ++CL+ A + E + EA
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
+ M P A T++ +++GLC A +E + +G P + Y+ +I L
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQK---QGLKPNNITYTTMIAGL 807
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
+ G A L + G +PD +N+++ LS
Sbjct: 808 AKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLS 843
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 133/552 (24%), Positives = 232/552 (42%), Gaps = 65/552 (11%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M + P S + T+I L A + ++ + ++ +F +++ V +E
Sbjct: 193 MMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREG 252
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
ID A + +M ++ D Y + + +V +K H MK++G+ P+ V Y
Sbjct: 253 RIDAALSLL-DEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTY 311
Query: 120 NTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
TLI LCK ++ A L +++ P ++ +I Y A LLE+
Sbjct: 312 TTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGG 220
G +P V+ +L L G+V +A+ I +E + + G+++
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAA 431
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ M+ G PN+ T NI+I C+ LD A +F + S + T+ +LI G
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
L GR+DD + + M DS + + Y S++ ++ ++++ + K+M R
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQIPN--VVVYTSLIQNFFKCGRKEDGHKIYKEM---VHR 546
Query: 341 AVDRSLKILGFCVD-----GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
L +L +D G VE + F+++ +G VP+V Y LIH + RE
Sbjct: 547 GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRET 606
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGH--- 451
+L EM G +NTV+ G C+ G V A +L+EE M+ G + ++ G
Sbjct: 607 YKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE-MKTKGLQPTVVTYGSVVD 665
Query: 452 -----------------------------YSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
YS LI + G A ++L +++ KG+ P
Sbjct: 666 GLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 725
Query: 483 DYLTWNSLLICL 494
+ TWN LL L
Sbjct: 726 NSYTWNCLLDAL 737
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 206/454 (45%), Gaps = 31/454 (6%)
Query: 47 KIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH 105
+++N+ L V+ + ++D ++M +G ++ L+ ++++ + F ++
Sbjct: 134 EVYNAFLMVMARTRNLDYLEQIL-EEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIE 192
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEE 161
+M+ +P Y TLI +L + +L M+E N F+ L+ + +E
Sbjct: 193 MMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREG 252
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC 221
+ AL LL++ S F D+V ++ G++GKV
Sbjct: 253 RIDAALSLLDEMKSNSFTADLVLYNVCIDCF-------------------GKVGKVDMAW 293
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+F EM+ +G +P+ TY LI C+ LD A+++F ++ ++ Y+T+I G
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-LFPR 340
S G+ D+ +L+ ++G + YN +L L R+ + +EAL +M + P
Sbjct: 354 GSAGKFDEAYSLLE--RQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPN 411
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
++ I C G +E A + D M E G PN++ + +I C+ +++ EA +
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+ P + TF +++ GL R+G V A L E + + +P Y+ LI+
Sbjct: 472 GLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYE---KMLDSDQIPNVVVYTSLIQNFF 528
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ G + + +MV +G PD + NS + C+
Sbjct: 529 KCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCV 562
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 192/453 (42%), Gaps = 26/453 (5%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
+ P+ + + +I L +A + +K D + + P++ N ++D L K + +D A
Sbjct: 408 AAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEAC 467
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ + + D T+ L+ GL RV D + L M PN V+Y +LI +
Sbjct: 468 SIFLG-LDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQN 526
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
K G+ + +M P+ + + + K + L E+ + G VPD
Sbjct: 527 FFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPD 586
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
V + + ++ L G + ++ E EQG + GKV + L+
Sbjct: 587 VRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLE 646
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM+ KG P V TY ++ + LD A +F + K G+ N V Y +LI G G
Sbjct: 647 EMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVG 706
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVD 343
RID+ IL+ E ++G +N +L L + + DEA + M+ L P A+
Sbjct: 707 RIDEAYLILE--ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMT 764
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
S+ I G C+ A + +M ++G PN + Y +I + V EA L
Sbjct: 765 YSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFK 824
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
G +P ++ +N ++ GL A + EE
Sbjct: 825 ASGGVPDSACYNAMIEGLSSANKAMDAYIVFEE 857
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + +V+ GL + +++ + + ++ I++S++D K ID A
Sbjct: 655 PTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLI 714
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++M G+ + YT+ L+ L + + MK+ PN++ Y+ +I+ LC
Sbjct: 715 L-EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLC 773
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K +A +M++ PN++T++ +I K N++ A L ++ + G VPD
Sbjct: 774 MIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSA 833
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
++E L S + MDA + EE+ +G K L + + CL
Sbjct: 834 CYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCL 883
>gi|242039357|ref|XP_002467073.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
gi|241920927|gb|EER94071.1| hypothetical protein SORBIDRAFT_01g019180 [Sorghum bicolor]
Length = 808
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 235/497 (47%), Gaps = 38/497 (7%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD 81
RA+M +D + +S NM S+ ++S+L L K D+ L K+M + G+ D
Sbjct: 159 ARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSLRKADVALE---IFKEMESCGIPPSD 215
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSLCKNGKVGRARSLMS 140
Y+++IL+ GLC +++G+ L ++ G P + +NTL+ +LC G + A+S+
Sbjct: 216 YSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSALCNWGFIQDAKSVFC 275
Query: 141 DMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT------------ 184
M + P+ T+S +I CK ++ A + + G D+VT
Sbjct: 276 LMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDIVTCNSLINGFRLHG 335
Query: 185 ----ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
I K++E++ +G D V G V+ G + K++ +G N+ TY+
Sbjct: 336 HTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDVEEGMKIRKDILGQGMELNIVTYS 395
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+LI++ + G+ ++ ++ G+ + + Y LI G G I L++ LM S
Sbjct: 396 VLINALFKKGLFYEVENLLGEICSVGLELDVIAYSILIHGYSKLGEIGRALQVWNLMCSS 455
Query: 301 KEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDRSLKILGFCVD 354
+ R++P + S+L GL ++ DEA YL+ + + + V ++ I G+
Sbjct: 456 Q-----RVTPTSVNHVSILLGLCKKGFLDEARSYLETIASKYQPSDVVLYNVVIDGYAKV 510
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G++ +A + +D +I G P +V + L++ YC+ + A + LP T+
Sbjct: 511 GDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAESYFTAIQLSDLLPTTVTY 570
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
T++ L G V + L L +E G+G P + YS +IK LC++ F A +L
Sbjct: 571 TTLMDALSEAGKVHSMLSLFKE---MTGKGIKPNAVTYSVVIKGLCKQFMFHDAKNVLDD 627
Query: 475 MVGKGILPDYLTWNSLL 491
M +G D + +N+L+
Sbjct: 628 MCIEGFDADPIPYNTLI 644
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 222/530 (41%), Gaps = 67/530 (12%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKM 72
F T++ L I D L+ ++ + PS +++I+ L K ++ AF + +
Sbjct: 254 FNTLMSALCNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIG-SVSEAFNIFQSV 312
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G++ D T L+ G L + K++ +M+ GV+P+ V Y LI C+ G V
Sbjct: 313 TEEGMELDIVTCNSLINGFRLHGHTREIPKMIEMMRGLGVEPDIVTYTILIAGHCEGGDV 372
Query: 133 GRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT-- 186
+ D+ E N VT+S+LI A K+ LL + S G DV+ +
Sbjct: 373 EEGMKIRKDILGQGMELNIVTYSVLINALFKKGLFYEVENLLGEICSVGLELDVIAYSIL 432
Query: 187 --------------KVLELLCSVGRV----MDAVEILEESGEQGRLGKVKGGCRFLKEME 228
+V L+CS RV ++ V IL ++G L + + +L+ +
Sbjct: 433 IHGYSKLGEIGRALQVWNLMCSSQRVTPTSVNHVSILLGLCKKGFLDEARS---YLETIA 489
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
K +V YN++I Y + G + +A+ +++ + + G+ VT ++L+ G C G +
Sbjct: 490 SKYQPSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLH 549
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
++ S Y +++ L + L K+M + + P AV S+
Sbjct: 550 MAESYFTAIQLSD--LLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSV 607
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C DAK D M EG + + Y+ LI +C+ + + A + + M G
Sbjct: 608 VIKGLCKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRG 667
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR----------------------- 443
+P T+N +++ LC +G V A ++ E R G
Sbjct: 668 VMPTPVTYNLLVNVLCSKGLVIHA-EMQLESFRKQGAKLRKFAYITLIKAQCAKGMPYKA 726
Query: 444 ----GSLPGSGH------YSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G L +G +S I LC++ + A ML+ M+ G+ PD
Sbjct: 727 IMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEALMLVPIMLSVGVYPD 776
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 25/295 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
P D ++ VI G + I + V+ D + M P++ NS+L K D+ +A +
Sbjct: 494 PSDVVLYNVVIDGYAKVGDIGNAVQLYDAIIMAGMCPTIVTCNSLLYGYCKFGDLHMAES 553
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++ + S + TY LM L +V L M +G+KPN+V Y+ +I L
Sbjct: 554 YF-TAIQLSDLLPTTVTYTTLMDALSEAGKVHSMLSLFKEMTGKGIKPNAVTYSVVIKGL 612
Query: 127 CKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK A++++ DM + + + ++ LI +C+ ++ NA + E G +P
Sbjct: 613 CKQFMFHDAKNVLDDMCIEGFDADPIPYNTLIQGFCETQDAKNAFGVYELMVFRGVMPTP 672
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT ++ +LCS G V+ A LE +QG K++ +F Y L
Sbjct: 673 VTYNLLVNVLCSKGLVIHAEMQLESFRKQG--AKLR---KF--------------AYITL 713
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
I + C G+ A+ F + G + + I LC + L ++ +M
Sbjct: 714 IKAQCAKGMPYKAIMWFGKLLDAGFEASIEDFSAAINRLCKRQFTKEALMLVPIM 768
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
N ++ L +SY + AL V + M + + TYD+L+ L + D L+I
Sbjct: 147 NSIVWDALANSYARAQMNHDALYVLSKMSSLNMQISITTYDSLLYSL---RKADVALEIF 203
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGF 351
+ ME G ++ ++ GL ++++ EAL +L+++ K P + + +
Sbjct: 204 KEMESC--GIPPSDYSHSILIDGLCKQDKIGEALSFLQEIRKEGKFIPLGMTFNTLMSAL 261
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
C G ++DAK F M++ G P+ Y +IH C+ V EA + + +T G
Sbjct: 262 CNWGFIQDAKSVFCLMLKYGLNPSRHTYSTIIHGLCKIGSVSEAFNIFQSVTEEGMELDI 321
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
T N++++G G+ K++E MRG+G P Y+ LI CE G + +
Sbjct: 322 VTCNSLINGFRLHGHTREIPKMIEM-MRGLGVE--PDIVTYTILIAGHCEGGDVEEGMKI 378
Query: 472 LVQMVGKGILPDYLTWNSLLICLSQQ 497
++G+G+ + +T++ L+ L ++
Sbjct: 379 RKDILGQGMELNIVTYSVLINALFKK 404
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 199/405 (49%), Gaps = 27/405 (6%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++A G D +Y L+ GLC T ++L + V+PN V+YNT+I SLC
Sbjct: 156 FHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLC 215
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+ V A L S+M P+ VT++ LI L A+ L + PDV
Sbjct: 216 KDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVY 275
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRF-LKEM 227
T +++ LC G + A +L +QG L K + F M
Sbjct: 276 TFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTM 335
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
R+G P+V +Y+I+I+ C+T ++D A+++F +M ++ N VTY++LI GL GRI
Sbjct: 336 ARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRI 395
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D ++ M + G + Y+S+L L + +Q D+A+ + ++ + + P +
Sbjct: 396 SDAWDLVNEMHN--RGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYT 453
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ + G C +G ++DA+ + ++ +G +V +Y+ +++ C+E EA L+ +M +
Sbjct: 454 ILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDN 513
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
G +P A T+ T++ L A+KL+ E I +GS GS
Sbjct: 514 GCIPDAVTYETLVRALFENDKNDKAVKLLRE---MIVQGSAVGSN 555
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 204/433 (47%), Gaps = 30/433 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K+ G D T L+KGLCL +V + + ++G + V Y TLI+ LCK G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A ++ ++ +PN V ++ +I + CK++ +++A L + PDVVT T
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYT 243
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ VGR+ +AV + + M K P+V T+NIL+
Sbjct: 244 TLIYGCLIVGRLKEAVGLFNQ-------------------MLLKNIKPDVYTFNILVDGL 284
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + A +V M G+ N VTY++L+ G + + + M ++ G
Sbjct: 285 CKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTM--ARRGVTP 342
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ Y+ ++ GL + DEA+ K+M + + P V + I G G + DA
Sbjct: 343 DVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLV 402
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
++M G +V+ Y L+ A C+ +V +A L+ ++ G P T+ ++ GLC+
Sbjct: 403 NEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A + V +D+ + +G Y+ ++ LC++G F A L+ +M G +PD
Sbjct: 463 GRLKDA-QAVYQDL--LIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDA 519
Query: 485 LTWNSLLICLSQQ 497
+T+ +L+ L +
Sbjct: 520 VTYETLVRALFEN 532
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 187/419 (44%), Gaps = 59/419 (14%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D+ + T+I GL + ++ + + P++ ++N+I+D L K+ + + +
Sbjct: 168 DQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLC 227
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+M+ + D TY L+ G + R+ + L + M + +KP+ +N L+ LCK
Sbjct: 228 SEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKE 287
Query: 130 GKVGRARSLMSDM----EEPNDVTFSILICAY--CKEENLVNALVLLEKSFSFGFVPDVV 183
G++ +AR++++ M + N VT++ L+ Y K+EN A + G PDV
Sbjct: 288 GEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQEN--KATFVFNTMARRGVTPDVQ 345
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ + ++ LC V +AV + +E + + G++ + EM
Sbjct: 346 SYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM 405
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G +V TY+ L+ + C+ +D A+ + +K GI N TY L+ GLC GR+
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
D + Q + +G + YN ++ GL +E DEAL + +ME
Sbjct: 466 KDAQAVYQ--DLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKME------------ 511
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G +P+ V Y+ L+ A + ++ +A +L++EM G
Sbjct: 512 ---------------------DNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 154/331 (46%), Gaps = 27/331 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G + + V + + N+ P + FN ++D L KE ++ AR
Sbjct: 237 PDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNV 296
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M+ GV + TY LM G L + + + M RGV P+ Y+ +I+ LC
Sbjct: 297 L-AVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLC 355
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V A +L +M PN VT++ LI K + +A L+ + + G DV+
Sbjct: 356 KTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVI 415
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + +L+ LC +V A+ ++ + +Q G PN+ TY IL+
Sbjct: 416 TYSSLLDALCKNHQVDKAITLITKIKDQ-------------------GIQPNIYTYTILV 456
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G L A V+ D+ I G + Y+ ++ GLC G D+ L ++ MED+ G
Sbjct: 457 DGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDN--G 514
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
Y +++ L+ ++ D+A++ L++M
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREM 545
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 139/315 (44%), Gaps = 40/315 (12%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+L F K+ME K P++ T+NILI+ +C G L+ A V + G + V
Sbjct: 76 KLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTV 135
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMED--SKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
T TLI+GLC G++ + L +D +K ++S Y +++ GL + + AL+
Sbjct: 136 TITTLIKGLCLNGKVREA---LHFHDDVIAKGFHLDQVS-YGTLINGLCKTGETRAALQV 191
Query: 331 LKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L++++ L P V + I C D V A +MI + P+VV Y LI+
Sbjct: 192 LRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLI 251
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK---------------- 432
R++EA L +M P TFN ++ GLC++G + A
Sbjct: 252 VGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVT 311
Query: 433 ---------LVEEDMRGI-------GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
LV+++ + RG P YS +I LC+ A L +M
Sbjct: 312 YNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMH 371
Query: 477 GKGILPDYLTWNSLL 491
K + P+ +T+NSL+
Sbjct: 372 SKSMAPNTVTYNSLI 386
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDL 63
PD + +I GL + +M+++ V + +M P+ +NS++D L+K + DL
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ + G D TY+ L+ LC ++V L+ +K +G++PN Y L+
Sbjct: 402 VNEMHNR-----GQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILV 456
Query: 124 HSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCKNG++ A+++ D+ + +++++ CKE AL L+ K G +
Sbjct: 457 DGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
PD VT ++ L + AV++L E QG
Sbjct: 517 PDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVK- 58
HS P+ + ++I GL + I+D A DLV+ + + ++S+LD L K
Sbjct: 371 HSKSMAPNTVTYNSLIDGLLKYGRISD---AWDLVNEMHNRGQPADVITYSSLLDALCKN 427
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+D A K+ G+Q + YTY IL+ GLC R+ D + + +G + +
Sbjct: 428 HQVDKAITLI-TKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKM 486
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK 172
YN +++ LCK G A SL+S ME+ P+ VT+ L+ A + + A+ LL +
Sbjct: 487 YNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLRE 544
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 194/413 (46%), Gaps = 30/413 (7%)
Query: 85 AILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME- 143
++++ G C R+ D +LL M GVK N+ YN L+ + + R ++ +ME
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMES 196
Query: 144 ---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
EP T++IL+ ++ + ++ DV + V+ C G V
Sbjct: 197 GGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRR 256
Query: 201 AVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
A E+ +E +G G PN TY LI+ +C+ G +++A +
Sbjct: 257 ASEVFDEC-----VGN--------------GIEPNERTYGALINGFCKIGQIEAAEMLLT 297
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
DM++ G+ N + ++T+I G C G +D L+I +ME + G + + YN++ GL R
Sbjct: 298 DMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVME--RMGIQLDVYTYNTLACGLCR 355
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
N+ ++A + L M + + V + I +G++ +A+R F M +G P+VV
Sbjct: 356 VNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVT 415
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y+ +I Y + +REA KEM G +P T+ ++ G C G V AL+L EE
Sbjct: 416 YNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMK 475
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ RG+ P Y+ LI L ++G + A M+ G+ PD ++ L+
Sbjct: 476 Q---RGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 183/411 (44%), Gaps = 27/411 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
V+ G +A ++D + D + R + + +N +LD ++ D A K+M + G
Sbjct: 139 VVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGG 198
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V+ TY IL+ GL + + +K + V + Y+ +I++ C+ G V RA
Sbjct: 199 VEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRAS 258
Query: 137 SLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
+ + EPN+ T+ LI +CK + A +LL G + + +++
Sbjct: 259 EVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY 318
Query: 193 CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL 252
C G V A+EI MER G +V TYN L C +
Sbjct: 319 CRHGMVDKALEIK-------------------AVMERMGIQLDVYTYNTLACGLCRVNRM 359
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
+ A + + M +G+ N+V+Y TLI G + + ++ + ME +GS+ + YN
Sbjct: 360 EDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEG--KGSRPSVVTYN 417
Query: 313 SVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
++ G + EA + K+MEK L P + + G CV+G V+ A R F++M +
Sbjct: 418 VMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQR 477
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
G PNVV Y LI +E R EA + M G P + ++ ++ L
Sbjct: 478 GAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 148/310 (47%), Gaps = 22/310 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + ++ GL A I+ V D + R N+ + ++++++ + ++ A
Sbjct: 201 PTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEV 260
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + +G++ ++ TY L+ G C ++ LL M+ RGV N +I+NT+I C
Sbjct: 261 F-DECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYC 319
Query: 128 KNGKVGRA---RSLMSDMEEPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
++G V +A +++M M DV T++ L C C+ + +A LL G + V
Sbjct: 320 RHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYV 379
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ T ++ + G +++A + + +G + G ++ RF KEM
Sbjct: 380 SYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEM 439
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
E+KG +P+V TY L+ +C G +D AL +F +MK G N V Y LI GL GR
Sbjct: 440 EKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRS 499
Query: 288 DDGLKILQLM 297
++ + M
Sbjct: 500 EEAFQFYDNM 509
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/460 (26%), Positives = 204/460 (44%), Gaps = 30/460 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + + G RA M+ + L+ + + ++L L+ +
Sbjct: 105 PDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTV 164
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M A D + YA ++ GLC R + LL S G +PN V+YN LI C
Sbjct: 165 FVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCN 224
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A + M+ PN T++ LI CK + A+VL + G P+VVT
Sbjct: 225 AGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVT 284
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ C+ G + A R L ME G +PN T+++LI
Sbjct: 285 YTALIQGQCNEGHLQCAF-------------------RLLHLMETNGLVPNDWTFSVLID 325
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+ C+ ++ A + G+ N V Y +LI GLC G+ID +++Q M EG
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM--ISEGF 383
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
Y+S++ GL R+ + +A L+ M + + V ++ I + E K+
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD+MI G P++V Y + +YC+E R+ +A ++ +M G P T+NT++ G
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYA 503
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G V A E +G+G P Y+ L++ + +K
Sbjct: 504 NLGLVSQAFSTFEV---MVGKGWKPNEDSYTVLLRLVVKK 540
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/502 (24%), Positives = 233/502 (46%), Gaps = 40/502 (7%)
Query: 1 MPHSIQSP----PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL 56
+ H + SP P T++ L R RM D+ L SR +L+ + ++++
Sbjct: 27 LSHRVLSPSAPLPPLRCLNTLLMALARHRMFPDM---ESLASRMPAR-NLRTYTTLINAY 82
Query: 57 -VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN 115
+ DI A+ + ++ +G+ D Y Y + G C + ++ +M RG
Sbjct: 83 CLAGDIPAAKQ-HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRT 141
Query: 116 SVIYNTLIHSLCKNGKVGRARSLM----SDMEEPNDVTFSILICAYCKEENLVNALVLLE 171
+ Y L+H L G V A ++ +D P+ ++ ++ C+ A VLLE
Sbjct: 142 AFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLE 201
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKG 231
++ S GF P++V +++ C+ G + A+ + + M+
Sbjct: 202 EAMSNGFEPNIVVYNALIDGYCNAGEMEHAL-------------------KVFEGMDGNR 242
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PNV TY LI C++G ++ A+ +F+ M G+ N VTY LI+G C+ G +
Sbjct: 243 CSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAF 302
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKIL 349
++L LME + G ++ ++ L + + +EA +L + K + V + I
Sbjct: 303 RLLHLMETN--GLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLID 360
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
G C G ++ A +MI EG VP+ Y LI C+++++ +A+ ++++M G
Sbjct: 361 GLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQA 420
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ L R+ K+ + + I G P Y+ +++ CE+G + A
Sbjct: 421 SPVTYTIIIDELVREVGSEGPKKIFD---KMIATGINPDIVTYTVFVRSYCEEGRMEDAE 477
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
++VQMV +G+ P+ +T+N+L+
Sbjct: 478 SMIVQMVDRGVFPNLVTYNTLI 499
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 182/412 (44%), Gaps = 36/412 (8%)
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
NTL+ +L ++ SL S M N T++ LI AYC ++ A L G
Sbjct: 45 NTLLMALARHRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLA 104
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD T + C R G + CR M +GCL TY
Sbjct: 105 PDSYAYTSFVLGYC-------------------RAGMLTHACRVFVLMPLRGCLRTAFTY 145
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
L+ G++ A+ VF M+ D + + Y T++ GLC GR + + L E
Sbjct: 146 TALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTE--EAEVLLEEA 203
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNV 357
G + I YN+++ G + + AL+ + M+ + P + I G C G V
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A F +M+E G PNVV Y LI C E ++ A L+ M +G +P TF+ +
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ LC++ V A + ++ +G Y+ LI LC+ G +A L+ +M+
Sbjct: 324 IDALCKREKVEEAQLFLGSLVK---KGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380
Query: 478 KGILPDYLTWNSLL--ICLSQQTTWLLLLLLNEM--------VSFVMVVHEL 519
+G +PD +++SL+ +C ++ + L+L + M V++ +++ EL
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDEL 432
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 197/432 (45%), Gaps = 47/432 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ ++ +I G A + +K + + +P+++ + ++ L K ++ A
Sbjct: 210 PNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVL 269
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ +G++ + TY L++G C + F+LLH+M++ G+ PN ++ LI +LC
Sbjct: 270 F-SRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALC 328
Query: 128 KNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K KV A+ SL+ + N+V ++ LI CK + A L++K S GFVPD
Sbjct: 329 KREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAH 388
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ + +++ LC ++ A +LE+ E+G R +G + +M
Sbjct: 389 SYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKM 448
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P++ TY + + SYCE G ++ A + M G+ N VTY+TLIRG + G +
Sbjct: 449 IATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLV 508
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
++M +G K Y +L + +++ D +++ K + + L+
Sbjct: 509 SQAFSTFEVM--VGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADM-------KDLQ 559
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVV-IYDCLIHAYCQEERVREASELMKEMTGHG 406
+L +ED I E +P IY C I C+ +R+ EA M
Sbjct: 560 VL-------LED--------ITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNAN 604
Query: 407 YLPIASTFNTVL 418
P + +++
Sbjct: 605 LTPSEDVYTSII 616
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 218/495 (44%), Gaps = 56/495 (11%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
VIR LG A+MI + + P+ + +NS++ +L+ E + Y +
Sbjct: 165 VIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEG 224
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
D TY+ L+ C R +LL+ MK G++P + IY +I K V A
Sbjct: 225 HCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
SL +M YC+ PDV T T+++ L
Sbjct: 285 LSLFEEMRY-----------MYCR--------------------PDVFTYTELIRGLGKA 313
Query: 196 GRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTY 239
GR+ +A E + G+ G++ G + +EM C+PNV TY
Sbjct: 314 GRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTY 373
Query: 240 NILISSYCET-GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
N +I + E+ + F MK GIS + TY LI G C RI+ + +L+ M+
Sbjct: 374 NTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMD 433
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR--SLKILGFCVDGN 356
+ +G + Y S++ L + + D A E +++++ + R ++ I G
Sbjct: 434 E--KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGR 491
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++DA FD+M + G PNV Y+ L+ + + EA M++M HG LP +++N
Sbjct: 492 LDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNI 551
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+L+GL + G A++++ + P + Y+ ++ AL G F+ A+ L+ +M
Sbjct: 552 ILNGLAKTGGPHRAMEMLTNMKNSTIK---PDAVSYNTVLSALSHAGMFEEAAELMKEMN 608
Query: 477 GKGILPDYLTWNSLL 491
G D +T++S+L
Sbjct: 609 ALGFEYDLITYSSIL 623
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 190/427 (44%), Gaps = 35/427 (8%)
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-----EPNDVTFS 151
+G + + +K+R +P + YN++I L G+ + L ++M P+ VT+S
Sbjct: 175 IGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYS 234
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI A+CK +A+ LL + G P T ++ L + V A+ + EE
Sbjct: 235 ALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYM 294
Query: 212 ----------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G+ G++ F EM+R+ C P+ N +I+ + G LD
Sbjct: 295 YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDG 354
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLC-SGGRIDDGLKILQLMEDSKEGSKGRISP--YN 312
L +F +M + N VTY+T+I+ L S R+ + + M+ GS SP Y+
Sbjct: 355 LKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMK----GSGISPSPFTYS 410
Query: 313 SVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGNVED-AKRCFDQMIEE 370
++ G + N+ ++A+ L++M EK FP ++ D A F ++ E
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G + +Y +I + R+ +A L EM+ G P +N ++SGL R + A
Sbjct: 471 CGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEA 530
Query: 431 LKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
L MR + G LP Y+ ++ L + GG A +L M I PD +++N+
Sbjct: 531 LT----TMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNT 586
Query: 490 LLICLSQ 496
+L LS
Sbjct: 587 VLSALSH 593
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 188/421 (44%), Gaps = 30/421 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I + + ++ + + M P+ KI+ I+ + K +++ A +
Sbjct: 228 PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSL 287
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M + D +TY L++GL R+ + + H M+ KP++V+ N +I+ L
Sbjct: 288 F-EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLG 346
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALV-LLEKSFSFGFVPDV 182
K G++ L +M PN VT++ +I A + ++ V+ + E+ G P
Sbjct: 347 KAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSP 406
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T + +++ C R+ A+ +LEE M+ KG P Y L
Sbjct: 407 FTYSILIDGFCKTNRIEKAMMLLEE-------------------MDEKGFPPCPAAYCSL 447
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + + D A ++F ++K + S + Y +I+ L GR+DD + + M SK
Sbjct: 448 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEM--SKL 505
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + YN+++ GL R DEAL +++M++ P ++ + G G A
Sbjct: 506 GCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRA 565
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
M P+ V Y+ ++ A EA+ELMKEM G+ T++++L
Sbjct: 566 MEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEA 625
Query: 421 L 421
+
Sbjct: 626 I 626
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 156/321 (48%), Gaps = 26/321 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + +I LG+A ++D +K + + + P++ +N+I+ L + ++ F
Sbjct: 333 PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFS 392
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M SG+ +TY+IL+ G C TNR+ LL M +G P Y +LI +L
Sbjct: 393 WFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 452
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + A L +++E + ++++I K L +A+ L ++ G P+V
Sbjct: 453 KAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
++ L + +A+ +++M+ GCLP++++YNI++
Sbjct: 513 AYNALMSGLARACMLDEALTT-------------------MRKMQEHGCLPDINSYNIIL 553
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +TG A+++ +MK I + V+Y+T++ L G ++ ++++ M + G
Sbjct: 554 NGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM--NALG 611
Query: 304 SKGRISPYNSVLYGLYRENQQ 324
+ + Y+S+L + + +Q+
Sbjct: 612 FEYDLITYSSILEAIGKVDQE 632
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 134/305 (43%), Gaps = 10/305 (3%)
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
M+ +++ G +GK +++ + C P YN +I G + ++
Sbjct: 160 MELSQVIRMLGNAKMIGK---AITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216
Query: 259 FNDMKIDG-ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+N+M +G + VTY LI C GR D +++L M+++ +I Y ++
Sbjct: 217 YNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI--YTMIISL 274
Query: 318 LYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
++ + AL ++M ++ P + I G G +++A + +M E P+
Sbjct: 275 FFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPD 334
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V+ + +I+ + R+ + +L +EM +P T+NT++ L + + +
Sbjct: 335 TVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWF 394
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
E M+G G P + YS LI C+ + A MLL +M KG P + SL+ L
Sbjct: 395 ERMKGSGISPSPFT--YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALG 452
Query: 496 QQTTW 500
+ +
Sbjct: 453 KAKRY 457
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 184/385 (47%), Gaps = 13/385 (3%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++A G + ++ +Y IL+ GLC ++L + + V N V+Y+T+I SLC
Sbjct: 140 FHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLC 199
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K V A L S M P+ VTFS LI +C A L + PDV
Sbjct: 200 KEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVC 259
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ LC G + +L ++ + +V + ++ P+V +Y I+I
Sbjct: 260 TFNILVDALCKEGSTKETKNVLAVMMKE--VNQVNKAKHVFNIIGKRRVTPDVHSYTIII 317
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ ++D AL +FN+M+ GI+ + VTY +LI GLC RI ++L M G
Sbjct: 318 KRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMH--ARG 375
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y S L+ L + +Q D+A+ +K++ + + P ++ I G C +G E+A+
Sbjct: 376 QPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQ 435
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F ++ +G V Y+ +I+ C E EA L+++M +G P T+ T++ L
Sbjct: 436 VIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRAL 495
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSL 446
+ A KL+ E I RG L
Sbjct: 496 FKNDENHKAEKLLRE---MIARGLL 517
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 220/489 (44%), Gaps = 47/489 (9%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID---LARAFYRKKMMASGVQGDDYT 83
++D + + + R N +PS+ FN IL LVK + + +A + Y + + + + T
Sbjct: 27 VHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHR-LQLNAITPSIVT 85
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ ++ C + F +L + G P+++ TLI LC NGKV A +
Sbjct: 86 FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145
Query: 144 EP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
N+V++ ILI CK AL +L K +VV + +++ LC V
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVT 205
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A E+ + M K P+V T++ LI +C G A +F
Sbjct: 206 EAYELYSQ-------------------MIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ-LMEDSKEGSKG----------RI 308
++M + I+ + T++ L+ LC G + +L +M++ + +K R+
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRV 306
Query: 309 SP----YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+P Y ++ L + DEAL +M + + P V S I G C + A
Sbjct: 307 TPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWE 366
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
DQM G +V+ Y +HA C+ +V +A L+K++ G P +T+N ++ GLC
Sbjct: 367 LLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLC 426
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
++G A +++ +D+ + +G Y+ +I LC +G F A LL +M G P
Sbjct: 427 KEGRFENA-QVIFQDL--LIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTP 483
Query: 483 DYLTWNSLL 491
D +T+ +++
Sbjct: 484 DVVTYETII 492
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 156/324 (48%), Gaps = 39/324 (12%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
++++I+D L KE + +M+ V D T++ L+ G C+ + + F L H M
Sbjct: 190 MYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEM 249
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM-EEPNDV------------------ 148
+ P+ +N L+ +LCK G +++++ M +E N V
Sbjct: 250 VLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPD 309
Query: 149 --TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
+++I+I CK + + AL L + G PD VT + +++ LC R+ A E+L+
Sbjct: 310 VHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLD 369
Query: 207 ESGEQGRLGKVKGGCRFL----------------KEMERKGCLPNVDTYNILISSYCETG 250
+ +G+ V FL K+++ +G PN++TYNILI C+ G
Sbjct: 370 QMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEG 429
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
++A +F D+ I G TY+ +I GLC G D+ + +L+ MED+ G +
Sbjct: 430 RFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDN--GCTPDVVT 487
Query: 311 YNSVLYGLYRENQQDEALEYLKQM 334
Y +++ L++ ++ +A + L++M
Sbjct: 488 YETIIRALFKNDENHKAEKLLREM 511
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + +I+ L + +M+++ + + + +TP ++S++D L K + ++ A+
Sbjct: 308 PDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSE-RISHAWE 366
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M A G D TY + LC ++V L+ +K +G++PN YN LI LC
Sbjct: 367 LLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLC 426
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ A+ + D+ + T++I+I C E A+ LLEK G PDVV
Sbjct: 427 KEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVV 486
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL 214
T ++ L A ++L E +G L
Sbjct: 487 TYETIIRALFKNDENHKAEKLLREMIARGLL 517
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 124/290 (42%), Gaps = 45/290 (15%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDS--ALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M R P++ +N ++ S ++ + A+ +++ ++++ I+ + VT++T+I C
Sbjct: 37 MLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHL 96
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
G +D +L +L Y P +
Sbjct: 97 GEMDFAFSVLA-----------------KILKMGYH------------------PDTITL 121
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I G C++G V +A D +I G N V Y LI+ C+ R A ++++++ G
Sbjct: 122 TTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDG 181
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
++T++ LC++ V A +L + I + P +S LI C G
Sbjct: 182 KLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQ---MIVKKVSPDVVTFSALIYGFCMVGQ 238
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICL-----SQQTTWLLLLLLNEM 509
F+ A L +MV I PD T+N L+ L +++T +L +++ E+
Sbjct: 239 FKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEV 288
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 219/496 (44%), Gaps = 40/496 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F +I+ + MI V++ +++ F+ P + +N++L V+V++++ L +M+
Sbjct: 129 FTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRML 188
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
+ T++IL+ G+C + + + ++ M R + PN + Y +I LC+ K
Sbjct: 189 KLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKAD 248
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
A L M++ P+ VT++ L+ +CK + AL LL+ +V D + ++
Sbjct: 249 VAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLI 308
Query: 190 ELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCL 233
+ L R DA + E + GK K R L EM +G +
Sbjct: 309 DGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLV 368
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+ YN LI YC+ G+LD A + ++ + + TY LI G+C G + D +I
Sbjct: 369 PDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQI 428
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-----KLFPRAVDRSLKI 348
ME K G + +N+++ G + ++A +ME LF R + ++
Sbjct: 429 FNEME--KHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRV 486
Query: 349 LG----------FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
L C G + A Q+ + G PN++ Y+ LIH +C+ + A +L
Sbjct: 487 LDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKL 546
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
KE+ G P + T+ T+++GL A ++++ ++ G P + Y +
Sbjct: 547 FKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKN---GCTPITEVYKSFMTW 603
Query: 459 LCEKGGFQSASMLLVQ 474
C + A L ++
Sbjct: 604 SCRRNKITLAFSLWLK 619
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 174/405 (42%), Gaps = 39/405 (9%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A+ +YRK M ++ D Y I+MKGL + D +LL+ M RG+ P++ YN LI
Sbjct: 320 AQVWYRK-MTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALI 378
Query: 124 HSLCKNGKVGRARSLMSDMEEPNDV-----TFSILICAYCKEENLVNALVLLEKSFSFGF 178
C G + A+SL ++ + ND T++ILIC C+ + +A + + G
Sbjct: 379 KGYCDLGLLDEAKSLHLEISK-NDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGC 437
Query: 179 VPDVVTITKVLELLCSVG-----------------------------RVMDAVEILEESG 209
P VVT +++ C G RV+D +
Sbjct: 438 YPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVE 497
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
+ G + L ++ G PN+ TYNILI +C+ G ++ A +F ++++ G+S
Sbjct: 498 QLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSP 557
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ VTY TLI GL S R +D +L + K G Y S + R N+ A
Sbjct: 558 DSVTYGTLINGLLSANREEDAFTVLD--QILKNGCTPITEVYKSFMTWSCRRNKITLAFS 615
Query: 330 -YLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+LK + + R + + G VE+A R +M + + Y + CQ
Sbjct: 616 LWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQ 675
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
R+ EA ++ + H L + ++ L + GN+ A ++
Sbjct: 676 AGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEI 720
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 199/488 (40%), Gaps = 121/488 (24%)
Query: 99 DGFKL----LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA---RSLMSDME-EPNDVTF 150
+GF+L L +K G ++ + LI + K + +A +M D + +P+ T+
Sbjct: 105 NGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTY 164
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ ++ ++E ++ AL + + +P++ T + +++ +C G+ +A+++ +E
Sbjct: 165 NTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDE--- 221
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M ++ LPN TY I+IS C+ D A +F MK G +
Sbjct: 222 ----------------MTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPD 265
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDS-----KEGSKGRISPYNSVLYGLYRENQQD 325
VTY+ L+ G C GR+D+ L +L+ E K+G Y+ ++ GL+R + +
Sbjct: 266 SVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQG-------YSCLIDGLFRARRFE 318
Query: 326 EALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+A + ++M + P + ++ + G G +DA R ++M E G VP+ Y+ LI
Sbjct: 319 DAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALI 378
Query: 384 HAYC-----------------------------------QEERVREASELMKEMTGHGYL 408
YC + V +A ++ EM HG
Sbjct: 379 KGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCY 438
Query: 409 PIASTFNTVLSGLCRQGNVGTA----------------LKLVEEDMRGIGRGSL------ 446
P TFN ++ G C+ GN+ A L+L + R + SL
Sbjct: 439 PSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQ 498
Query: 447 -----------------------PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
P Y+ LI C+ G A L ++ KG+ PD
Sbjct: 499 LCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPD 558
Query: 484 YLTWNSLL 491
+T+ +L+
Sbjct: 559 SVTYGTLI 566
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 14/297 (4%)
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
G RF + L + ++N++I + + V ++K G S + + LI+
Sbjct: 75 GFRFFIWASKFRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQ 134
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-- 337
I+ ++ ++M+D K + YN+VL+ + R+ AL +M KL
Sbjct: 135 AYAKMDMIEKAVESFEMMKDF--DCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNC 192
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P S+ I G C G ++A + FD+M + +PN + Y +I CQ ++ A
Sbjct: 193 LPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYR 252
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSP 454
L M HG +P + T+N +L G C+ G V A LK E+D R L G YS
Sbjct: 253 LFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKD-----RYVLDKQG-YSC 306
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
LI L F+ A + +M I PD + + ++ LS+ + L LLNEM
Sbjct: 307 LIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT 363
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 247/562 (43%), Gaps = 84/562 (14%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L+ G C + +LL MK+ G P+ V YNTL++ CK G + A+ LM ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
EPN +T++ LI AYCK + L +AL + ++ VPDVVT T ++ LC G+V
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A + E E G + G V M +G +V Y L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ G+ ++A D+F + + + N VTY LI G C G ++ G +LQ ME+
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK--- 256
Query: 304 SKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
I P Y+S++ G ++ +EA++ M K+ R + ++ + G +DG +
Sbjct: 257 ---HIFPNVIVYSSIVDGYTKKGLLNEAMDV---MRKMVQRNILPNVFVYGTLIDGYFKA 310
Query: 360 AKR-----CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+R F +M G N + D ++ + R+ EA EL K+M G LP +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370
Query: 415 NTVLSGLCRQGNVGTALKLVEE---------------------------------DMRGI 441
+++ G + G A + +E MR +
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT 499
G P S ++ +I A C++G +A LL +M G+ P+ +T N L+ +C + +
Sbjct: 431 GLA--PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488
Query: 500 WLLLLLLNEMVSFVMVVHELSAKEK-----RCKLRSLNHLAHGAGS-VWLGLRIHDTTHT 553
+ LLN+M+ VM H K K R + + H V +G+++ +T+
Sbjct: 489 K-TMDLLNDML--VMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYN 545
Query: 554 FIIDRRVEIGHVFCSSSSLKDV 575
+I +G + ++ KD+
Sbjct: 546 TLISTFCRLGMIRRATLVFKDM 567
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 238/579 (41%), Gaps = 102/579 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F +I G R I+ V+ + + P + +N++++ K + F KK+M
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK----IGDLFTAKKLM 75
Query: 74 AS----GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++ + TY L+ C + + D + M + + P+ V Y +++ LCK+
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GKV A+S+ +MEE PN +++ LI + KE N+ A VL + G DVV
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 186 TKVLELLCSVGRVMDAVE----ILEES------------GEQGRLGKVKGGCRFLKEMER 229
T +++ L G +A + +LEES +LG V G L+EME
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K PNV Y+ ++ Y + G+L+ A+DV M I N Y TLI G +
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
L + + M+ G + +S + L R + +EA E K M L P V+ +
Sbjct: 316 ALDLFKEMKS--RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373
Query: 348 ILGFCVDGNVEDAKRCFDQMIEE----------------------------------GGV 373
+ GF G DA +M E+ G
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLA 433
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ ++ +I+AYC+E + A +L+ EM +G P + T N ++ LC G + + L
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 434 VEEDMRGIGRGSLPGS---------------------------------GHYSPLIKALC 460
+ DM +G P + Y+ LI C
Sbjct: 494 LN-DMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFC 552
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
G + A+++ M+GKGIL D +T+N+L+ C+S
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 217/496 (43%), Gaps = 45/496 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD + T++ G + I D+ A L +S N+ P++ + +++D K
Sbjct: 50 PDIVTYNTLMNGFCK---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDA 106
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M + D TY +M GLC + +V + + M+ GV PN Y TLI S
Sbjct: 107 LYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS 166
Query: 126 LCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNA----LVLLEKSFSFG 177
L K G V A L M + V ++ L+ K NA VLLE+S
Sbjct: 167 LFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES---- 222
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
VP+ VT + +++ C +LG V G L+EME K PNV
Sbjct: 223 LVPNCVTYSALIDGHC-------------------KLGDVNKGELLLQEMEEKHIFPNVI 263
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
Y+ ++ Y + G+L+ A+DV M I N Y TLI G + L + + M
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
+ G + +S + L R + +EA E K M L P V+ + + GF G
Sbjct: 324 KS--RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
DA +M E+ +VV Y+ LI+ + + E+ M G P ++TFN
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFN 440
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T+++ C++GN+G ALKL+ E M+ G P S + L++ LC G + LL M
Sbjct: 441 TMINAYCKEGNLGNALKLLNE-MKSYGLK--PNSITCNILVQRLCAAGEIEKTMDLLNDM 497
Query: 476 VGKGILPDYLTWNSLL 491
+ G P T ++L
Sbjct: 498 LVMGFHPTPTTHKAVL 513
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 138/582 (23%), Positives = 234/582 (40%), Gaps = 102/582 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + ++ GL ++ + + + + P+ + +++D L KE ++A AF
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEG-NVAEAFV 178
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D Y LM GL + + V+ + PN V Y+ LI C
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238
Query: 128 KNGKVGRARSLMSDMEE---------------------------------------PNDV 148
K G V + L+ +MEE PN
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298
Query: 149 TFSILICAYCK-------------------EEN------LVNALV----------LLEKS 173
+ LI Y K EEN VN L L +
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
S G +PD V T +++ G+ DA I +E E+ +LGK
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY 418
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ F M + G P+ T+N +I++YC+ G L +AL + N+MK G+ N +T + L
Sbjct: 419 ESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
++ LC+ G I+ + +L M G + + +VL + + D L Q+ +
Sbjct: 478 VQRLCAAGEIEKTMDLLNDM--LVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGM 535
Query: 338 FPRAVDRSLK---ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ +D S I FC G + A F M+ +G + +++ Y+ LIH YC +++
Sbjct: 536 GVK-LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A + +M G P T+N +L GL + A LV + RG +P + Y
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE---RGLVPNATTYDI 651
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L+ + G + L +M+ KG +P T+N L+ C ++
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 209/517 (40%), Gaps = 129/517 (24%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-----IDL 63
P+ ++ +++ G + ++N+ + + + N+ P++ ++ +++D K D +DL
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319
Query: 64 ARAFYR------------------------------KKMMASGVQGDDYTYAILMKGLCL 93
+ K MM+ G+ D Y +M G
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ D F + M + + V YN LI+ L K GK + S + M + P+ T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSAT 438
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG---RVMDAVE--- 203
F+ +I AYCKE NL NAL LL + S+G P+ +T +++ LC+ G + MD +
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498
Query: 204 -------------ILEESGEQGR--------------------------------LGKVK 218
+L+ S + R LG ++
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
K+M KG L ++ TYN LI YC + L A V + M +G+S N TY+ L+
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
GL + I + ++ M++ L
Sbjct: 619 GGLSAARLIKEAAGLVNQMKE-----------------------------------RGLV 643
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P A + + G GN+++ + + +MI +G VP Y+ LI + + +++ +A EL
Sbjct: 644 PNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 399 MKEMTGHGYLPIASTFNTVLSG---LCRQGNVGTALK 432
M+EM G P +ST++ ++ G L +Q + +LK
Sbjct: 704 MQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 13/275 (4%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R L + +V+ +N+LI YC G + A+++ MK +G + + VTY+TL+ G
Sbjct: 3 RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62
Query: 282 CSGGRIDDGLKILQLM-EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
C +I D +LM E S + + Y +++ + ++AL +M + L
Sbjct: 63 C---KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + + G C G VE+AK F +M E G VPN Y LI + +E V EA L
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL 179
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI--GRGSLPGSGHYSPLI 456
M G + ++ GL + G A EDM + +P YS LI
Sbjct: 180 QGRMVVRGIGFDVVVYTALMDGLFKAGMANNA-----EDMFQVLLEESLVPNCVTYSALI 234
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+ G +LL +M K I P+ + ++S++
Sbjct: 235 DGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 180/428 (42%), Gaps = 37/428 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +++ G +A +D ++ + + +N +++ L K + +F+
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G+ D T+ ++ C +G+ KLL+ MKS G+KPNS+ N L+ LC
Sbjct: 425 -TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCA 483
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ + L++DM P T ++ A K L ++ G D+ T
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLST 543
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKV----------------KGGCRFLKEME 228
++ C +G + A + ++ +G L + K +M
Sbjct: 544 YNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQML 603
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G PNV+TYNIL+ ++ A + N MK G+ N TYD L+ G G +
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
+ +K+ E +G + YN ++ + + +A E +++M+ + P + +
Sbjct: 664 ECVKLY--CEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDI 721
Query: 347 KILG-FCVDGNVE-----------DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
I G + + E +AKR F++M E+G +P C+ + + +
Sbjct: 722 LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKAD 781
Query: 395 ASELMKEM 402
A ++ ++
Sbjct: 782 AQRILNKL 789
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 184/386 (47%), Gaps = 31/386 (8%)
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
LH++ + GV P + +N L+ + ++GK+ AR++ +M +P VTF+ L+ CK
Sbjct: 103 LHLLDA-GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 161
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+L NA L G PDV T ++ LC GR+ DA+E+ EE E+G
Sbjct: 162 ASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 221
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G V G EM +G ++ YN L++ +C + +A D+ +M+
Sbjct: 222 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR 281
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
DG+ + VTY TLI G C G +D +++ Q M D EG Y +++ GL + +
Sbjct: 282 KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSD--EGVALDDVTYTALISGLSKAGR 339
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+A L +M + L P ++ I FC +G+V+ + +M +G P +V Y+
Sbjct: 340 SVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNV 399
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+++ +C +++ A L+ M G P T+N +L G C+ G V +L
Sbjct: 400 VMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS------ 453
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQS 467
+G + G Y+ LI +K +S
Sbjct: 454 AKGMVSDFGVYTSLINEFVKKKSAKS 479
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 153/338 (45%), Gaps = 57/338 (16%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PP+ F ++R + R+ + D + R + P++ FN+++ + K D++ A A
Sbjct: 111 PPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANA 170
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
R M +G+ D YTY ++GLC T R+ D ++ M RG+ PN+V+ TLI +
Sbjct: 171 L-RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAH 229
Query: 127 CKNGKVGRARSL-------------------------MSDMEEPND-------------- 147
CK G V L + DM+ ND
Sbjct: 230 CKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDK 289
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VT++ LI CKE L A+ + ++ G D VT T ++ L GR +DA IL E
Sbjct: 290 VTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE 349
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
E G + G VK G + LKEM+ KG P + TYN++++ +C G
Sbjct: 350 MMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQ 409
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ +A + N M G+ N +TY+ L+ G C G++ D
Sbjct: 410 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRD 447
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 9/282 (3%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
RL V F + G P +N+L+ +G L SA +VF++M G+ V
Sbjct: 91 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVV 150
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
T++TL+ G+C +++ + LM +K G + Y + + GL + + +A+E +
Sbjct: 151 TFNTLMSGMCKASDLNNANALRGLM--AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 208
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M L P V + I C +G+V +M G ++V Y+ L++ +C+
Sbjct: 209 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 268
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGS 449
++ A+++++EM G P T+ T++ G C++G + TA+++ +E G+ +
Sbjct: 269 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDV--- 325
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI L + G A +L +M+ G+ PD T+ ++
Sbjct: 326 -TYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVI 366
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 232/490 (47%), Gaps = 41/490 (8%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKM 72
F ++ + R + V + + ++ P N L LV+ + + A+ Y +M
Sbjct: 166 FNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELY-SRM 224
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+A GV GD+ T +LM+ + + ++L RG +P+S++Y+ + + CK +
Sbjct: 225 VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDL 284
Query: 133 GRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A SL+ +M+E P+ T++ +I A K+ N+ +A+ L ++ S G +VV T
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C ++ A+ + + +ME++G PN T+++LI +
Sbjct: 345 LITGHCKNNDLVSALVLFD-------------------KMEKEGPSPNSVTFSVLIEWFR 385
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G ++ AL+ + M++ G++ + T+I+G G + ++ LK L ++S E
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALK---LFDESFETGLAN 442
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ N++L L ++ + DEA E L +ME + P V + +LG C N++ A+ F
Sbjct: 443 VFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFS 502
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
++E+G PN Y LI + + A E++ MT + T+++GLC+ G
Sbjct: 503 NILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVG 562
Query: 426 NVGTALKL----VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
A +L +EE + S Y+ +I ++G SA +M G GI
Sbjct: 563 QTSKARELLANMIEEKRLCVSCMS------YNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616
Query: 482 PDYLTWNSLL 491
P+ +T+ SL+
Sbjct: 617 PNVITYTSLM 626
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 215/477 (45%), Gaps = 29/477 (6%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS + + S++ VK+ ++D A + +M++ G+ + L+ G C N +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRL-KDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
L M+ G PNSV ++ LI KNG++ +A ME P+ +I +
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
K + AL L ++SF G +V +L LC G+ +A E+L + +G V
Sbjct: 421 KGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 219 -------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
G CR + KG PN TY+ILI +AL+V N M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
I N V Y T+I GLC G+ ++L M + K +S YNS++ G ++E
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS-YNSIIDGFFKEG 598
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ D A+ ++M + P + + + G C + ++ A D+M +G ++ Y
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI +C+ + AS L E+ G P +N+++SG GN+ AL L ++ ++
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
R L G Y+ LI L + G AS L +M G++PD + + ++ LS++
Sbjct: 719 GLRCDL---GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 207/400 (51%), Gaps = 33/400 (8%)
Query: 32 KATDLVSRFN---MTPSLKIFNSI-LDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL 87
+AT+L+S+ + P++ +N++ L ++++DLAR + ++ G++ ++YTY+IL
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF-SNILEKGLKPNNYTYSIL 519
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPND 147
+ G + + ++++ M S ++ N V+Y T+I+ LCK G+ +AR L+++M E
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 148 V-----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+ +++ +I + KE + +A+ E+ G P+V+T T ++ LC R+ A+
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+ +E M+ KG ++ Y LI +C+ ++SA +F+++
Sbjct: 640 EMRDE-------------------MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL 680
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+G++ + Y++LI G + G + L + + M K+G + + Y +++ GL ++
Sbjct: 681 LEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM--LKDGLRCDLGTYTTLIDGLLKDG 738
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
A E +M+ L P + ++ + G G + F++M + PNV+IY+
Sbjct: 739 NLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+I + +E + EA L EM G LP +TF+ ++SG
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 196/411 (47%), Gaps = 29/411 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ LC + + +LL M+SRG+ PN V YN ++ C+ + AR + S++ E
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
PN+ T+SILI + + NAL ++ S + V ++ LC VG+ A
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+L E+ RL C C+ +YN +I + + G +DSA+ + +M
Sbjct: 569 ELLANMIEEKRL------C--------VSCM----SYNSIIDGFFKEGEMDSAVAAYEEM 610
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+GIS N +TY +L+ GLC R+D L++ M++ +G K I Y +++ G + +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN--KGVKLDIPAYGALIDGFCKRS 668
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ A ++ E L P + I GF GN+ A + +M+++G ++ Y
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI ++ + ASEL EM G +P + +++GL ++G +K+ EE +
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I +G A L +M+ KGILPD T++ L+
Sbjct: 789 ---NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 130/328 (39%), Gaps = 73/328 (22%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
N +N L+++Y + D A+D+ N M ++D I + F + + L + + ++
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPF-FPYVNRTLSALVQRNSLTEAKEL 220
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL-KQMEK-------LFPRAVD-- 343
M G G ++ RE + EALE L + +E+ L+ AV
Sbjct: 221 YSRM--VAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 344 -------------RSLKILGFCV---------------DGNVEDAKRCFDQMIEEGGVPN 375
R +K CV GN++DA R D+M+ +G N
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMN 338
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
VV LI +C+ + A L +M G P + TF+ ++ + G + AL+ +
Sbjct: 339 VVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 436 E-----------DMRGIGRGSLPGSGHYSPL--------------------IKALCEKGG 464
+ + I +G L G H L + LC++G
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGK 458
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLI 492
A+ LL +M +GI P+ +++N++++
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVML 486
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 123/345 (35%), Gaps = 133/345 (38%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKI------FNSILDVLVKE-DIDLAR 65
++ T+I GL + + KA +L++ NM ++ +NSI+D KE ++D A
Sbjct: 550 VYQTIINGLCK---VGQTSKARELLA--NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG-------------------------DG 100
A Y ++M +G+ + TY LM GLC NR+ DG
Sbjct: 605 AAY-EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 101 F----------KLLHVMKSRGVKPNSVIYN------------------------------ 120
F L + G+ P+ IYN
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 121 -----TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFS 175
TLI L K+G + A L ++M+ +
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQ-------------------------------A 752
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
G VPD + T ++ L G+ + V++ E EM++ PN
Sbjct: 753 VGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE-------------------EMKKNNVTPN 793
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
V YN +I+ + G LD A + ++M GI + T+D L+ G
Sbjct: 794 VLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PDE I+ ++ GL + VVK + + + N+TP++ I+N+++ +E +L AF
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG-NLDEAFR 815
Query: 68 YRKKMMASGVQGDDYTYAILMKG 90
+M+ G+ D T+ IL+ G
Sbjct: 816 LHDEMLDKGILPDGATFDILVSG 838
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 225/533 (42%), Gaps = 104/533 (19%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDI-DLAR 65
E F + + G+A + N KA +L R F P++K FNS+L+V+++ D A
Sbjct: 107 EKSFFVMFKAYGKAHLPN---KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRAL 163
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNTLI 123
FY HV+ K + PN + +N +I
Sbjct: 164 EFYN-----------------------------------HVVGAKDMNILPNVLSFNLII 188
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
S+CK G V A L +M P+ T+ L+ CK + + A+ LL++ G
Sbjct: 189 KSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCF 248
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P T ++ LC + G+ R+ K+ + M KGC+PN TY
Sbjct: 249 PSPATFNVLINGLC-------------KKGDFTRVTKL------VDNMFLKGCVPNEVTY 289
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI C G LD AL + + M N VTY T+I GL GR DG ++L LME+
Sbjct: 290 NTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEE 349
Query: 300 S-----------------KEG-----------SKGRISPYNSVLY-----GLYRENQQDE 326
KEG S + N+VLY GL R+ + DE
Sbjct: 350 RGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDE 409
Query: 327 ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
A++ L +M + P A S + GF GN A + M + N V Y LIH
Sbjct: 410 AMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIH 469
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
C++ +V EA + +M G P +++++ GLC G+V ALKL E M +
Sbjct: 470 GLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNE-MLCLEPD 528
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
S P Y+ L ALC++ A LL M+ +G PD +T N L L ++
Sbjct: 529 SQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREK 581
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 171/391 (43%), Gaps = 39/391 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E + T+I GL ++ + D + P+ + +I++ LVK+ L A
Sbjct: 284 PNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARV 343
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G ++Y Y++L+ GL + + +L +G K N+V+Y+ L+ LC+
Sbjct: 344 LVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCR 403
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ K A ++S+M + PN TFS L+ + + N A+ + + + V
Sbjct: 404 DRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVC 463
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LC G+VM+A+ + +M GC P+V Y+ +I
Sbjct: 464 YSVLIHGLCKDGKVMEAMMVWA-------------------KMLATGCRPDVVAYSSMIQ 504
Query: 245 SYCETGVLDSALDVFNDMKI--DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ G ++ AL ++N+M + +TY+ L LC I + +L M D
Sbjct: 505 GLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLD--R 562
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G + N + + RE + D + K +++L R + R + LG A +
Sbjct: 563 GCDPDLVTCN-IFLRMLRE-KLDPPQDGAKFLDELVVRLLKRQ-RNLG---------ASK 610
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
+ M+++ P + ++H CQ ++++
Sbjct: 611 IVEVMLQKFLSPKASTWARVVHELCQPKKIQ 641
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 212/448 (47%), Gaps = 35/448 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + G++ TY+IL+ G TN L K++ N +IY+ +IH+ C++
Sbjct: 310 EEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQS 369
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA L+ +MEE P DV S ++ Y ++ L++ E+ GF P +++
Sbjct: 370 GNMDRAEELVREMEEDGIDAPIDVYHS-MMHGYTVVQDEKKCLIVFERLKECGFKPTIIS 428
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L VG+V A+ I +E G L ++M
Sbjct: 429 YGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 488
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G P+ YN+L+ ++C+ G +D A+ +F M+ + + + T+ +I G G +
Sbjct: 489 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMK 548
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
L LM S G + YN++++GL R++Q ++A+ L +M + P ++
Sbjct: 549 RAFDTLDLMRRS--GCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTI 606
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G+ G++ A F ++ E G +V IY+ L+ A C+ R++ A + +EM+
Sbjct: 607 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 666
Query: 407 YLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
+N ++ G R+G+V A LK ++ED G P ++ I A C+ G
Sbjct: 667 IPRNTFIYNILIDGWARRGDVWEAADLLKQMKED------GIPPNIHTFTSYINACCKAG 720
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A ++ +M G+ P+ T+ +L+
Sbjct: 721 DMQRAENVIQEMADVGLKPNVKTFTTLI 748
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 177/416 (42%), Gaps = 27/416 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M G+ Y +M G + + +K G KP + Y LI+ K
Sbjct: 380 REMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKV 439
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GKV +A ++ +ME + N+ T+S+LI + + NA + E G PD
Sbjct: 440 GKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIY 499
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMER 229
++E C +G + A+ I E ++ G +K L M R
Sbjct: 500 NLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRR 559
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
GC P V TYN LI ++ A+ V + M I GI+ N TY ++RG + G I
Sbjct: 560 SGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGK 619
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
+ +++S G K + Y ++L + + AL ++M +K+ ++
Sbjct: 620 AFEYFTKIKES--GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNIL 677
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G+ G+V +A QM E+G PN+ + I+A C+ ++ A +++EM G
Sbjct: 678 IDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGL 737
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
P TF T++ G R ALK EE M+ G P Y L+ +L +
Sbjct: 738 KPNVKTFTTLIKGWARVSLPDRALKCFEE-MKSAGLK--PDEAAYHCLVTSLLSRA 790
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 132/322 (40%), Gaps = 60/322 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD +I+ ++ + ++ ++ + + + M PS + F I++ D+ RAF
Sbjct: 494 PDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAG-DMKRAFD 552
Query: 68 ------------------------YRK-----------KMMASGVQGDDYTYAILMKGLC 92
RK KM +G+ +++TY I+M+G
Sbjct: 553 TLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYA 612
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDV 148
+ +G F+ +K G+K + IY TL+ + CK+G++ A ++ +M N
Sbjct: 613 ASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTF 672
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ILI + + ++ A LL++ G P++ T T + C G + A +++
Sbjct: 673 IYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQ-- 730
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
EM G PNV T+ LI + + D AL F +MK G+
Sbjct: 731 -----------------EMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLK 773
Query: 269 WNFVTYDTLIRGLCSGGRIDDG 290
+ Y L+ L S + +G
Sbjct: 774 PDEAAYHCLVTSLLSRATVMEG 795
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 129/276 (46%), Gaps = 19/276 (6%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+ M +G PN + L+ +Y G + AL +MK +GI VTY LI G
Sbjct: 274 FENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGY-- 331
Query: 284 GGRIDDGLKILQLMEDSK---EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
G+ +D L +++K + G I Y+++++ + D A E +++ME+
Sbjct: 332 -GKTNDAQSADNLFKEAKTKLDNLNGII--YSNIIHAHCQSGNMDRAEELVREMEE---D 385
Query: 341 AVDRSLKILGFCVDGN--VEDAKRC---FDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+D + + + G V+D K+C F+++ E G P ++ Y CLI+ Y + +V +A
Sbjct: 386 GIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKA 445
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPL 455
+ KEM HG T++ +++G + A + EDM I G P Y+ L
Sbjct: 446 IAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIF-EDM--IKSGLQPDRAIYNLL 502
Query: 456 IKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++A C+ G A + +M + + P T+ ++
Sbjct: 503 VEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPII 538
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + L ++ + G+ A+ F+ M G PN ++ L+HAY +R A
Sbjct: 249 PSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSC 308
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE------DMRGIGRGSLPGSGHY 452
++EM G T++ ++SG + + +A L +E ++ GI Y
Sbjct: 309 VEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGI---------IY 359
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
S +I A C+ G A L+ +M GI ++S++
Sbjct: 360 SNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMM 398
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 264/600 (44%), Gaps = 98/600 (16%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID------LARAFYRK 70
+IR GR M N V + + NM S ++ N ++DVL++ + L ++
Sbjct: 158 LIRWFGRMGMANQSVLVYERLDS-NMKNS-QVRNVVIDVLLRNGLVDDAFKVLDEMLQKE 215
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+ D + KG LT G L+ S GV PNSV I SLCKN
Sbjct: 216 SVFPPNRITADIVLHEVWKGRLLTEEKIIG--LISRFSSHGVSPNSVWLTRFISSLCKNA 273
Query: 131 KVGRARSLMSDM-------EEPNDVTFSILICAYCKEENL--VNALVLLEKSFSFGFVPD 181
+ A ++SD+ E P F+ L+ + N+ +NALVL K PD
Sbjct: 274 RTNAAWDILSDLMKNKAPLEAP---PFNALLSCLGRNMNIGRMNALVL--KMDEMKIRPD 328
Query: 182 VVTITKVLELLCSVGRVMDAVEILEE----SGEQGRLGK---------VKGGCRF--LKE 226
VVT+ ++ LC RV +A+++ E+ + G + K + G C+ LKE
Sbjct: 329 VVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKE 388
Query: 227 MER--------KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
E + C+PN TYN LI YC G L++A +V + MK DGI + VT +T++
Sbjct: 389 AEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIV 448
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---- 334
G+C ++ + +L M+ KEG KG + Y ++++ + ++A+ + +M
Sbjct: 449 GGMCRHHGLN--MAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAG 506
Query: 335 ----EKLF----------------PRAVDR------SLKILG-------FCVDGNVEDAK 361
K++ R V++ SL +L FC N E
Sbjct: 507 CSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVY 566
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
M +EG P+ + Y+ LI + + + +M++M P +T+ V+
Sbjct: 567 EMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAY 626
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C G +G ALKL +DM G+ P + Y+ LI A + G F A L +M K +
Sbjct: 627 CSVGELGEALKLF-KDM-GLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 482 PDYLTWNSLLICLSQQT-TWLLLLLLNEMV---------SFVMVVHELSAKEKRCKLRSL 531
P+ T+N+L CL ++ LL L++EMV + +++ LS ++ KLR
Sbjct: 685 PNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKF 744
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 30/277 (10%)
Query: 43 TPSLKIFNSILDVL--VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+P KI+ +++ L V+ D D R +K+ G D Y +L+ C N
Sbjct: 508 SPDAKIYYALISGLCQVRRDHDAIRVV--EKLREGGFSLDLLAYNMLIGLFCDKNNAEKV 565
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+++L M+ G+KP+S+ YNTLI K+ +M M E P T+ +I A
Sbjct: 566 YEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEA 625
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
YC L AL L + G V T + +L + +LG
Sbjct: 626 YCSVGELGEALKLFK---DMGLRSKVNPNTVIYNILINAF---------------SKLGN 667
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
+EM+ K PNV+TYN L E ++ L + ++M N +T +
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITMEI 727
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKG-RISPYN 312
L+ L SG D+ +K+ + M+ S + SP++
Sbjct: 728 LMERL-SGS--DELVKLRKFMQGYSVASPTEKASPFD 761
>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Brachypodium distachyon]
Length = 726
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 212/475 (44%), Gaps = 31/475 (6%)
Query: 43 TPSLKIFNSILDVLVKED-IDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+P++ ++ ++ D + LA AF +M GV+ + TY + GL T +V
Sbjct: 206 SPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASA 265
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+ L ++ RG N+ +N +I C+ G+V A + M++ P+ ++SIL+
Sbjct: 266 WNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDG 325
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
CK+ +++ LL + G P +V+ + +L LC G+V A E+ EQG
Sbjct: 326 LCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHD 385
Query: 217 -------VKGGCRFLK---------EMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
+ G C+ L +M +P+ Y LI ++C L AL VF
Sbjct: 386 HIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFE 445
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M G+S N VT L+ G ID+ L L + + G + Y ++ GL +
Sbjct: 446 LMLDSGVSPNVVTCTILVDGFGKERMIDEAF--LFLHKVRQFGIVPNLCMYRVIINGLCK 503
Query: 321 ENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
N+ D M K P V S+ I F + +A R F +M++EG PNV
Sbjct: 504 VNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFT 563
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y LI+ C ++R+ E L K M G P + +++ C++ N+ AL++
Sbjct: 564 YTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEI----F 619
Query: 439 RGIGRGSLPGSGH-YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
RG+G+ L Y+ LI + A L+ +M KG+ P +T+ +L+I
Sbjct: 620 RGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLII 674
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 196/445 (44%), Gaps = 34/445 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
P+ + + T + GL R R + ++ + + FN+++ V+E I++
Sbjct: 244 PNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEV 303
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A M G+ D ++Y+IL+ GLC V G+ LL M G+ P V Y++L+
Sbjct: 304 FDA-----MKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLL 358
Query: 124 HSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H LC+ GKV A L +EE + + +SI++ C+ N+ L FV
Sbjct: 359 HGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFV 418
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILE---ESGEQ-------------GRLGKVKGGCRF 223
PD T ++ C + DA+ + E +SG G+ + F
Sbjct: 419 PDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLF 478
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L ++ + G +PN+ Y ++I+ C+ D +F DM G + V Y +I
Sbjct: 479 LHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVK 538
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
++ + ++ M D EG+K + Y S++ GL +++ E + K M E L P
Sbjct: 539 ALKLPEAFRLFHKMLD--EGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDR 596
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + I+ +C N++ A F M + G + +Y CLI + + + A LM+E
Sbjct: 597 ILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEE 656
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGN 426
MT G P T+ ++ G + G+
Sbjct: 657 MTNKGLTPSVVTYTNLIIGYFKIGD 681
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 192/453 (42%), Gaps = 61/453 (13%)
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV--GRARSLMSDME 143
L+K L N++ L MKS G PN Y+ L+ + ++ A L+S+ME
Sbjct: 179 FLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEME 238
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+PN T+ + + + +A L+ G + V++ C G+V
Sbjct: 239 MKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQ 298
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+E+ + M++ G +P+ +Y+IL+ C+ G + + D+
Sbjct: 299 EAIEVFDA-------------------MKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLL 339
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+M +GI+ V+Y +L+ GLC G+++ ++ + +E+ +G K Y+ +L G
Sbjct: 340 VEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEE--QGFKHDHIVYSIILNGCC 397
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ + + M P A + + I FC N+ DA F+ M++ G PNVV
Sbjct: 398 QHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVV 457
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR-------------- 423
L+ + +E + EA + ++ G +P + +++GLC+
Sbjct: 458 TCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADM 517
Query: 424 --QGNVG-------------TALKLVEED---MRGIGRGSLPGSGHYSPLIKALCEKGGF 465
+G V ALKL E + + G+ P Y+ LI LC
Sbjct: 518 IKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRL 577
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
L M+ +G+ PD + + SL++C +++
Sbjct: 578 PEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRS 610
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 7/255 (2%)
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N L+ E + A +F+DMK G S N +Y L+ G R+ L E
Sbjct: 178 NFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEM 237
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFP-RAVDRSLKILGFCVDGNV 357
+G K + Y + LYGL R Q A +L+ + ++ P + I GFC +G V
Sbjct: 238 EMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQV 297
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++A FD M + G VP+ Y L+ C++ V +L+ EM +G P +++++
Sbjct: 298 QEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSL 357
Query: 418 LSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
L GLCR G V A +L + +G + YS ++ C+ + L MV
Sbjct: 358 LHGLCRAGKVELAFELFRRLEEQGFKHDHIV----YSIILNGCCQHLNIEVVCDLWNDMV 413
Query: 477 GKGILPDYLTWNSLL 491
+PD + SL+
Sbjct: 414 HHNFVPDAYNYTSLI 428
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 227/543 (41%), Gaps = 63/543 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P S + T+I + ++ + P++ +F +++ KE +D A +
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M +S + D Y + + +V +K H +++ G+KP+ V Y ++I LC
Sbjct: 226 L-DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC 284
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A + +E+ P ++ +I Y A LLE+ + G +P V+
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVI 344
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRFLKEME 228
+L L +G+V +A+ + EE + R GK+ M+
Sbjct: 345 AYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQ 404
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G PNV T NI++ C++ LD A +F M + + +T+ +LI GL GR+D
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVD 464
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-------------- 334
D KI + M DS + + Y S++ + ++++ + K M
Sbjct: 465 DAYKIYEKMLDSDCRTNSIV--YTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNT 522
Query: 335 -----------------------EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ P A S+ I G G + F M E+G
Sbjct: 523 YMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
V + Y+ +I +C+ +V +A +L++EM G+ P T+ +V+ GL + + A
Sbjct: 583 CVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY 642
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L EE + YS LI + G A ++L +++ KG+ P+ TWNSLL
Sbjct: 643 MLFEE---AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLL 699
Query: 492 ICL 494
L
Sbjct: 700 DAL 702
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 206/496 (41%), Gaps = 62/496 (12%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
+ P+ S + +I L RA ++ + D + + + P+++ N ++D L K + +D A
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + ++M D+ T+ L+ GL RV D +K+ M + NS++Y +LI +
Sbjct: 433 AIF-EQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKN 491
Query: 126 LCKNGKVGRARSLMSDMEEPN-----DVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+G+ + DM N + + + C + K + E+ S FVP
Sbjct: 492 FFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF-KAGEPEKGRAMFEEIKSRRFVP 550
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
D + + ++ L G + E+ EQG + GKV + L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+EM+ KG P V TY +I + LD A +F + K I N V Y +LI G
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GRID+ IL+ E ++G + +NS+L L + + +EAL
Sbjct: 671 GRIDEAYLILE--ELMQKGLTPNVYTWNSLLDALVKAEEINEAL---------------- 712
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
CF M E PN V Y LI+ C+ + +A +EM
Sbjct: 713 -----------------VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P ++ T++SGL + GN+ A L + R G +P S Y+ +I+ L
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFD---RFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 465 FQSASMLLVQMVGKGI 480
A L + +G+
Sbjct: 813 AMDAFSLFEETRRRGL 828
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 176/406 (43%), Gaps = 29/406 (7%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVT 149
N++ +GF ++ M+ +P Y TLI + +L M+ EP
Sbjct: 146 ANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHL 205
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ LI + KE + +AL LL++ S D+V ++
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF----------------- 248
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
G++GKV +F E+E G P+ TY +I C+ LD A+++F ++ +
Sbjct: 249 --GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
Y+T+I G S G+ D+ +L+ +GS + YN +L L + + DEAL
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLE--RQRAKGSIPSVIAYNCILTCLRKMGKVDEALR 364
Query: 330 YLKQMEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
++M+K P ++ I C G ++ A D M + G PNV + ++ C+
Sbjct: 365 VFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+++ EA + ++M P TF +++ GL + G V A K+ E+ + R +
Sbjct: 425 SQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTN--- 481
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
S Y+ LIK G + + MV + PD N+ + C+
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCM 527
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 10/289 (3%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ K++ G ++ M + P Y LI ++ D L +F M+ G
Sbjct: 145 KANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+ TLIRG GR+D L +L M+ S + I YN + + + D A ++
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD--IVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++E L P V + I C +++A F+ + + VP Y+ +I Y
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EA L++ G +P +N +L+ L + G V AL++ EE + + + P
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEE----MKKDAAPNLS 378
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
Y+ LI LC G A L M G+ P+ T N ++ +C SQ+
Sbjct: 379 TYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 75/431 (17%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE------ 59
PD F TVI GL G+ R DV K + + + PS+ +NS++D K+
Sbjct: 189 PDIYTFNTVISGLCRIGQLRKAGDVAKD---IKAWGLAPSVATYNSLIDGYCKKGGAGNM 245
Query: 60 -DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVI 118
+D+ K+M+ +G+ T+ +L+ G C + ++ MK +G+ + V
Sbjct: 246 YHVDM----LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
Query: 119 YNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF 174
YN+LI LC GKV LM +ME+ PN++TF ++ +CK+ + +A ++
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
PDVV T +++ +G++ DA+ + E M +KG P
Sbjct: 362 ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEA-------------------MAKKGISP 402
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV TYN LI+ + +G SA + ++MK GI + VTY+ LI LC G + +K+L
Sbjct: 403 NVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLL 462
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD 354
M S+ G + YN++ I GFC
Sbjct: 463 DEM--SEVGLEPNHLTYNTI---------------------------------IQGFCDK 487
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GN++ A +M + NVV Y+ I +CQ ++ EA++L+ EM +P T+
Sbjct: 488 GNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITY 547
Query: 415 NTVLSGLCRQG 425
T+ G+ +G
Sbjct: 548 ETIKEGMMEKG 558
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 187/390 (47%), Gaps = 36/390 (9%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFS 151
R D F L R +P++ N L+ L +V A RS + P+ TF+
Sbjct: 137 RAYDAFLLAGESHPRH-RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFN 195
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+I C+ L A + + ++G P V T +++ C ++
Sbjct: 196 TVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYC----------------KK 239
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G G + LKEM G P T+ +LI+ YC+ +A+ VF +MK GI+ +
Sbjct: 240 GGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASV 299
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA 327
VTY++LI GLCS G++++G+K+++ MED +SP + VL G ++ +A
Sbjct: 300 VTYNSLISGLCSEGKVEEGVKLMEEMEDLG------LSPNEITFGCVLKGFCKKGMMADA 353
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+++ M + + P V ++ I G+ G +EDA + M ++G PNV Y+CLI
Sbjct: 354 NDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITG 413
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+ + R AS L+ EM G T+N ++ LC +G V A+KL++E M +G
Sbjct: 414 FSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDE-MSEVGLE- 471
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
P Y+ +I+ C+KG +SA + +M
Sbjct: 472 -PNHLTYNTIIQGFCDKGNIKSAYEIRTRM 500
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 160/333 (48%), Gaps = 35/333 (10%)
Query: 169 LLEKSFSFGF----VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
L EK+F PD+ T V+ LC +G++ A ++
Sbjct: 174 LAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA------------------- 214
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDV---FNDMKIDGISWNFVTYDTLIRGL 281
K+++ G P+V TYN LI YC+ G + V +M GIS VT+ LI G
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FP 339
C +++ + M+ ++G + YNS++ GL E + +E ++ +++ME L P
Sbjct: 275 CKNSNTAAAVRVFEEMK--QQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ + GFC G + DA D M E P+VVIY LI Y + ++ +A +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKA 458
+ M G P +T+N +++G R G+ +A L++E +GI + Y+ LI A
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVV----TYNVLIGA 448
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC KG + A LL +M G+ P++LT+N+++
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 150/348 (43%), Gaps = 52/348 (14%)
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R+ P++ T+N +IS C G L A DV D+K G++ + TY++LI G C G
Sbjct: 184 RRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAG 243
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKI 348
+ + L+++ E + P AV + I
Sbjct: 244 NMYHVDMLLKEMVEAG--------------------------------ISPTAVTFGVLI 271
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G+C + N A R F++M ++G +VV Y+ LI C E +V E +LM+EM G
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P TF VL G C++G + A ++ R P Y+ LI G + A
Sbjct: 332 PNEITFGCVLKGFCKKGMMADANDWIDGMTE---RNVEPDVVIYTILIDGYRRLGKMEDA 388
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLL-LLNEM---------VSFVMVVHE 518
+ M KGI P+ T+N L+ S+ W LL+EM V++ +++
Sbjct: 389 MAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448
Query: 519 LSAK-EKRCKLRSLNHLAHGAGSVWLGLRIHDTTHTFIIDRRVEIGHV 565
L K E R ++ L+ ++ +GL + T+ II + G++
Sbjct: 449 LCCKGEVRKAVKLLDEMSE------VGLEPNHLTYNTIIQGFCDKGNI 490
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 247/562 (43%), Gaps = 84/562 (14%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L+ G C + +LL MK+ G P+ V YNTL++ CK G + A+ LM ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
EPN +T++ LI AYCK + L +AL + ++ VPDVVT T ++ LC G+V
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A + E E G + G V M +G +V Y L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ G+ ++A D+F + + + N VTY LI G C G ++ G +LQ ME+
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK--- 256
Query: 304 SKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
I P Y+S++ G ++ +EA++ M K+ R + ++ + G +DG +
Sbjct: 257 ---HIFPNVIVYSSIVDGYTKKGLLNEAMDV---MRKMVQRNILPNVFVYGTLIDGYFKA 310
Query: 360 AKR-----CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+R F +M G N + D ++ + R+ EA EL K+M G LP +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370
Query: 415 NTVLSGLCRQGNVGTALKLVEE---------------------------------DMRGI 441
+++ G + G A + +E MR +
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT 499
G P S ++ +I A C++G +A LL +M G+ P+ +T N L+ +C + +
Sbjct: 431 GLA--PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488
Query: 500 WLLLLLLNEMVSFVMVVHELSAKEK-----RCKLRSLNHLAHGAGS-VWLGLRIHDTTHT 553
+ LLN+M+ VM H K K R + + H V +G+++ +T+
Sbjct: 489 K-TMDLLNDML--VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545
Query: 554 FIIDRRVEIGHVFCSSSSLKDV 575
+I +G + ++ KD+
Sbjct: 546 TLISTFCRLGMIRRATLVFKDM 567
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 238/579 (41%), Gaps = 102/579 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F +I G R I+ V+ + + P + +N++++ K + F KK+M
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK----IGDLFTAKKLM 75
Query: 74 AS----GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++ + TY L+ C + + D + M + + P+ V Y +++ LCK+
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GKV A+S+ +MEE PN +++ LI + KE N+ A VL + G DVV
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 186 TKVLELLCSVGRVMDAVE----ILEES------------GEQGRLGKVKGGCRFLKEMER 229
T +++ L G +A + +LEES +LG V G L+EME
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K PNV Y+ ++ Y + G+L+ A+DV M I N Y TLI G +
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
L + + M+ G + +S + L R + +EA E K M L P V+ +
Sbjct: 316 ALDLFKEMKS--RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373
Query: 348 ILGFCVDGNVEDAKRCFDQMIEE----------------------------------GGV 373
+ GF G DA +M E+ G
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLA 433
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ ++ +I+AYC+E + A +L+ EM +G P + T N ++ LC G + + L
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 434 VEEDMRGIGRGSLPGS---------------------------------GHYSPLIKALC 460
+ DM +G P + Y+ LI C
Sbjct: 494 LN-DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
G + A+++ M+GKGIL D +T+N+L+ C+S
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 217/496 (43%), Gaps = 45/496 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD + T++ G + I D+ A L +S N+ P++ + +++D K
Sbjct: 50 PDIVTYNTLMNGFCK---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDA 106
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M + D TY +M GLC + +V + + M+ GV PN Y TLI S
Sbjct: 107 LYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS 166
Query: 126 LCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNA----LVLLEKSFSFG 177
L K G V A L M + V ++ L+ K NA VLLE+S
Sbjct: 167 LFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES---- 222
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
VP+ VT + +++ C +LG V G L+EME K PNV
Sbjct: 223 LVPNCVTYSALIDGHC-------------------KLGDVNKGELLLQEMEEKHIFPNVI 263
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
Y+ ++ Y + G+L+ A+DV M I N Y TLI G + L + + M
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
+ G + +S + L R + +EA E K M L P V+ + + GF G
Sbjct: 324 KS--RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
DA +M E+ +VV Y+ LI+ + + E+ M G P ++TFN
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFN 440
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T+++ C++GN+G ALKL+ E M+ G P S + L++ LC G + LL M
Sbjct: 441 TMINAYCKEGNLGNALKLLNE-MKSYGLK--PNSITCNILVQRLCAAGEIEKTMDLLNDM 497
Query: 476 VGKGILPDYLTWNSLL 491
+ G P T ++L
Sbjct: 498 LVMGFHPTPTTHKAVL 513
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 138/582 (23%), Positives = 234/582 (40%), Gaps = 102/582 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + ++ GL ++ + + + + P+ + +++D L KE ++A AF
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEG-NVAEAFV 178
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D Y LM GL + + V+ + PN V Y+ LI C
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238
Query: 128 KNGKVGRARSLMSDMEE---------------------------------------PNDV 148
K G V + L+ +MEE PN
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298
Query: 149 TFSILICAYCK-------------------EEN------LVNALV----------LLEKS 173
+ LI Y K EEN VN L L +
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
S G +PD V T +++ G+ DA I +E E+ +LGK
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY 418
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ F M + G P+ T+N +I++YC+ G L +AL + N+MK G+ N +T + L
Sbjct: 419 ESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
++ LC+ G I+ + +L M G + + +VL + + D L Q+ +
Sbjct: 478 VQRLCAAGEIEKTMDLLNDM--LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGM 535
Query: 338 FPRAVDRSLK---ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ +D S I FC G + A F M+ +G + +++ Y+ LIH YC +++
Sbjct: 536 GVK-LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A + +M G P T+N +L GL + A LV + RG +P + Y
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE---RGLVPNATTYDI 651
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L+ + G + L +M+ KG +P T+N L+ C ++
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 209/517 (40%), Gaps = 129/517 (24%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-----IDL 63
P+ ++ +++ G + ++N+ + + + N+ P++ ++ +++D K D +DL
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319
Query: 64 ARAFYR------------------------------KKMMASGVQGDDYTYAILMKGLCL 93
+ K MM+ G+ D Y +M G
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ D F + M + + V YN LI+ L K GK + S + M + P+ T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSAT 438
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV---MDAVE--- 203
F+ +I AYCKE NL NAL LL + S+G P+ +T +++ LC+ G + MD +
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498
Query: 204 -------------ILEESGEQGR--------------------------------LGKVK 218
+L+ S + R LG ++
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
K+M KG L ++ TYN LI YC + L A V + M +G+S N TY+ L+
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
GL + I + ++ M++ L
Sbjct: 619 GGLSAARLIKEAAGLVNQMKE-----------------------------------RGLV 643
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P A + + G GN+++ + + +MI +G VP Y+ LI + + +++ +A EL
Sbjct: 644 PNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 399 MKEMTGHGYLPIASTFNTVLSG---LCRQGNVGTALK 432
M+EM G P +ST++ ++ G L +Q + +LK
Sbjct: 704 MQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 11/261 (4%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+V+ +N+LI YC G + A+++ MK +G + + VTY+TL+ G C G + K++
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
E S + + Y +++ + ++AL +M + L P V + + G C
Sbjct: 76 G--EISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLC 133
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G VE+AK F +M E G VPN Y LI + +E V EA L M G
Sbjct: 134 KSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGI--GRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+ ++ GL + G A EDM + +P YS LI C+ G +
Sbjct: 194 VYTALMDGLFKAGMANNA-----EDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGEL 248
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
LL +M K I P+ + ++S++
Sbjct: 249 LLQEMEEKHIFPNVIVYSSIV 269
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 181/428 (42%), Gaps = 37/428 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +++ G +A +D ++ + + +N +++ L K + +F+
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G+ D T+ ++ C +G+ KLL+ MKS G+KPNS+ N L+ LC
Sbjct: 425 -TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCA 483
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ + L++DM P T ++ A K L + ++ G D+ T
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLST 543
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKV----------------KGGCRFLKEME 228
++ C +G + A + ++ +G L + K +M
Sbjct: 544 YNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQML 603
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G PNV+TYNIL+ ++ A + N MK G+ N TYD L+ G G +
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
+ +K+ E +G + YN ++ + + +A E +++M+ + P + +
Sbjct: 664 ECVKLY--CEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDI 721
Query: 347 KILG-FCVDGNVE-----------DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
I G + + E +AKR F++M E+G +P C+ + + +
Sbjct: 722 LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKAD 781
Query: 395 ASELMKEM 402
A ++ ++
Sbjct: 782 AQRILNKL 789
>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/540 (24%), Positives = 247/540 (45%), Gaps = 65/540 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL-ARAFY 68
D +F +++ R I D V+ + ++ P + I N++L +V+ ++ AR Y
Sbjct: 149 DSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLY 208
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ G+ GD YT ++M+ + + K K RG++ ++ Y+ L+ ++C+
Sbjct: 209 -DEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCR 267
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A L+ +M E P+ T++ +I A K+ N V AL L ++ S G +V+
Sbjct: 268 RLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIV 327
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK------GGCRFLKEMERK-------- 230
+++ C +G V A+++ +E E G + V GC + +ME+
Sbjct: 328 TRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMK 387
Query: 231 --GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PNV N L+ + E +L+ A +F++ GI+ N VTY+ L++ L G+++
Sbjct: 388 LMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVN 446
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ + + M +G + YN+++ G ++ D+A LK + L P AV +L
Sbjct: 447 EACNLWEKM--VSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTL 504
Query: 347 KILGFCVDGNVEDAKRCFDQM-----------------------------------IEEG 371
I GF G+ E A F+QM I++G
Sbjct: 505 LIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQG 564
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
V + Y+ +I + +E V A +EM G P T+ +++ GLC+ +G AL
Sbjct: 565 FVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ DM+ +G YS LI C+ +SAS +++ G+ P+ + +NS++
Sbjct: 625 EM-HSDMK--YKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 129/474 (27%), Positives = 222/474 (46%), Gaps = 36/474 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNM---TPSLKIFNSILDVLVKEDIDLAR 65
PD IF +I G + + D+ KA +L +R + P++ I NS+L+ ++++ L
Sbjct: 358 PDVVIFSVLINGCSK---VGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNL-LEH 413
Query: 66 AF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A+ + + G+ + TY IL+K L +V + L M S+G+ P+ V YN LI
Sbjct: 414 AYGLFDEAVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLIL 472
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + +A S++ + E PN VT+++LI + K+ + A V+ E+ + P
Sbjct: 473 GHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAP 532
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
T V+ L GRV + + L +QG + G V
Sbjct: 533 TDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAY 592
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+EM G P+V TY LI C++ + AL++ +DMK G+ + V Y LI G C
Sbjct: 593 REMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKM 652
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-LFPRAVD 343
++ K + D G YNS++ G N + AL ++M K P +
Sbjct: 653 HDMESASKFFTELLDI--GLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQ 710
Query: 344 RSLKILG-FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
I+G +G + A + +M+ + VP++V+Y LI+ ++ AS+++KEM
Sbjct: 711 VYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEM 770
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
G+ P +N +++G R+GN+ A +L +E + +G +P Y L+
Sbjct: 771 DGNNITPSVLVYNILIAGNFREGNLQEAFRLHDE---MLDKGLVPDDTTYDILV 821
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 195/481 (40%), Gaps = 65/481 (13%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G + D + L+K N++ D + M + P I N L+ ++ + V A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204
Query: 136 RSLMSDMEEP---------------------------------------NDVTFSILICA 156
R L +M E + +SIL+ A
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR--- 213
C+ +L A LL++ FG+VP T T V+ G ++A+ + +E G
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324
Query: 214 -------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
LG V + E+ G +P+V +++LI+ + G ++ A +++
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYT 384
Query: 261 DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
MK+ GI N ++L+ G ++ L +++ E + YN +L L
Sbjct: 385 RMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYG---LFDEAVEHGITNVVTYNILLKWLGE 441
Query: 321 ENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
+ +EA ++M + + P V + ILG C G ++ A ++E G PN V
Sbjct: 442 LGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVT 501
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
Y LI + ++ A + ++M P TFNTV++GL + G V +
Sbjct: 502 YTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLN--- 558
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQ 496
I +G + S Y+ +I ++G SA + +M GI PD +T+ SL+ +C S
Sbjct: 559 NFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSN 618
Query: 497 Q 497
+
Sbjct: 619 K 619
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 22/293 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + F TVI GLG+ +++ + + + +NSI+D KE +D A
Sbjct: 532 PTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLA 591
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
YR+ M SG+ D TY L+ GLC +N++G ++ MK +G+K + V Y+ LI C
Sbjct: 592 YRE-MCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFC 650
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + A +++ + PN V ++ +I + N+ AL L ++ D+
Sbjct: 651 KMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQ 710
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T ++ L G++ A+++ E + + G+++ + LKEM
Sbjct: 711 VYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEM 770
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ P+V YNILI+ G L A + ++M G+ + TYD L+ G
Sbjct: 771 DGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 181/454 (39%), Gaps = 37/454 (8%)
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSV 117
E I F K +++ Q + L+ L + K H V + RG
Sbjct: 36 EKIPSTPNFPEKIIISPESQPSEKKNRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVD 95
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
+ LIH L N K + + + D T S + C LLE S +G
Sbjct: 96 FISLLIHILSSNSKTCSSLQFLLNNYVFGDATPSAKVFVEC----------LLECSGRYG 145
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
F D +L+ V ++ DAVE E R V
Sbjct: 146 FESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDAR 205
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ EM +G + T ++++ + + G + F + K G+ + Y L++ +
Sbjct: 206 QLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAV 265
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPR 340
C R+D L L E + G Y +V+ ++ EAL +M + P
Sbjct: 266 CR--RLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPM 323
Query: 341 --AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
V RSL + G+CV G+V A + FD+++E G VP+VVI+ LI+ + + +A EL
Sbjct: 324 NVIVTRSL-MKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYEL 382
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M G P N++L G Q + A L +E + + Y+ L+K
Sbjct: 383 YTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV----EHGITNVVTYNILLKW 438
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
L E G A L +MV KGI P +++N+L++
Sbjct: 439 LGELGKVNEACNLWEKMVSKGITPSLVSYNNLIL 472
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+ DA CF M+E VP V I + L+ A + V +A +L EM G T +
Sbjct: 166 ITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHV 225
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
V+ ++G K +E GRG + YS L++A+C + A LL +M
Sbjct: 226 VMRACMKEGKFEEVEKFFKE---AKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMR 282
Query: 477 GKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMVS 511
G +P T+ ++++ C+ Q L L +EMVS
Sbjct: 283 EFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS 318
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 212/447 (47%), Gaps = 33/447 (7%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M A G++ TY+I++ G N L K++ N +IY+ +IH+ C++
Sbjct: 328 EEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHCQS 387
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA L+ +MEE P D S ++ Y ++ L++ E+ F P +++
Sbjct: 388 GNMDRAEELVREMEEDGIDAPIDAYHS-MMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 446
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ L +G+V A+ I +E G L +EM
Sbjct: 447 YGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEML 506
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+ G P+ YN+LI ++C+ G +D A+ + M+ + + + + +I G G +
Sbjct: 507 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 566
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
L IL LM S G + YN++++GL ++NQ + A+ L +M + P ++
Sbjct: 567 RALNILDLMRRS--GCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTI 624
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+ +G++ A F + I+EGG+ +V IY+ L+ A C+ R++ A + +EM+
Sbjct: 625 IMRGYAANGDIGKAFEYFTK-IKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQ 683
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGG 464
+N ++ G R+G+V A L M+ + +P + H Y+ I A C+ G
Sbjct: 684 KIARNTFVYNILIDGWARRGDVWEAADL----MKQMKEDGVPPNIHTYTSYINACCKAGD 739
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
Q A ++ +M G+ P+ T+ +L+
Sbjct: 740 MQRAQKVIEEMADVGLKPNLKTYTTLI 766
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 170/389 (43%), Gaps = 24/389 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M G+ Y +M G + + +K P+ + Y LI+ K
Sbjct: 398 REMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKI 457
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GKV +A ++ +ME + N+ T+S+LI + + NA + E+ G PD
Sbjct: 458 GKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIY 517
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMER 229
++E C +G + A+ ILE+ ++ G +K L M R
Sbjct: 518 NLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRR 577
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
GC P V TYN LI + ++ A+ V N M I GI+ N TY ++RG + G I
Sbjct: 578 SGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGK 637
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
+ +++ G K + Y ++L + + AL ++M +K+ ++
Sbjct: 638 AFEYFTKIKEG--GLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNIL 695
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G+ G+V +A QM E+G PN+ Y I+A C+ ++ A ++++EM G
Sbjct: 696 IDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGL 755
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE 436
P T+ T++ G + ALK EE
Sbjct: 756 KPNLKTYTTLIKGWAKASLPDRALKSFEE 784
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 129/286 (45%), Gaps = 23/286 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P F +I G A + + DL+ R P++ +N+++ L+K++
Sbjct: 547 PSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSV 606
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM +G+ +++TY I+M+G +G F+ +K G+K + IY TL+ + CK
Sbjct: 607 LNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCK 666
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G++ A ++ +M N ++ILI + + ++ A L+++ G P++ T
Sbjct: 667 SGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHT 726
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T + C G + A +++E EM G PN+ TY LI
Sbjct: 727 YTSYINACCKAGDMQRAQKVIE-------------------EMADVGLKPNLKTYTTLIK 767
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
+ + + D AL F +MK+ G+ + Y L+ L S + +G
Sbjct: 768 GWAKASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVMEG 813
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 162/392 (41%), Gaps = 61/392 (15%)
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
S + +P+ F ++I Y K + +A E + G P+ T ++ +V
Sbjct: 259 SAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAY-AVA 317
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R M +G ++EM+ +G + TY+I+I+ + + SA
Sbjct: 318 RDM------------------RGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSAD 359
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F + K N + Y +I C G +D ++++ ME+ +G I Y+S+++
Sbjct: 360 NLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEE--DGIDAPIDAYHSMMH 417
Query: 317 G----------------------------------LY-RENQQDEALEYLKQMEKLFPRA 341
G LY + + +A+ K+ME +
Sbjct: 418 GYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKH 477
Query: 342 VDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+++ +L GF + +A F++M++ G P+ IY+ LI A+C+ + A ++
Sbjct: 478 NNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRIL 537
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
++M P F ++ G G++ AL +++ R G P Y+ LI L
Sbjct: 538 EKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRS---GCAPTVMTYNALIHGL 594
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+K + A +L +M GI P+ T+ ++
Sbjct: 595 IKKNQVERAVSVLNKMSIAGITPNEHTYTIIM 626
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 39/281 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P + +I GL + + V + +S +TP+ + I+ D+ +AF
Sbjct: 582 PTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANG-DIGKAFE 640
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y K+ G++ D Y Y L++ C + R+ + M ++ + N+ +YN LI
Sbjct: 641 YFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWA 700
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G V A LM M+E PN T++ I A CK ++ A ++E+ G P++
Sbjct: 701 RRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLK 760
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +++ A++ E EM+ G P+ Y+ L+
Sbjct: 761 TYTTLIKGWAKASLPDRALKSFE-------------------EMKLAGLKPDEAAYHCLV 801
Query: 244 SSYCE----------TGVLDSALDVF-NDMKID---GISWN 270
+S TG+L ++F ND+ +D + W+
Sbjct: 802 TSLLSRATVMEGSTYTGILSICREMFENDLTVDMRTAVHWS 842
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 224/532 (42%), Gaps = 95/532 (17%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E + + GR + N V+ + + P+ +++N+++D L+K + +DLA +
Sbjct: 194 EELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAYLKF- 252
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + D +TY IL+ G+C V + +L+ M+ G PN Y LI
Sbjct: 253 QQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNA 312
Query: 130 GKVGRARSLMSDMEE----PNDVTF------------------------------SILIC 155
+ G A ++ M+E PN+ T + L+C
Sbjct: 313 KRAGEAFKVLQTMKERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVC 372
Query: 156 ---AYCKEENLV--NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
YC N + A++ L K+ G+VP T L + + + + +
Sbjct: 373 DNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQ 432
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
G + GK++ G R++ + G + N+ +YN++I C+ +D
Sbjct: 433 SGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDR 492
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A ++F D+ GIS N VTY+TLI G C G +D ++L+++ +S+ + I +NS+
Sbjct: 493 ASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESR--FRPDIFTFNSL 550
Query: 315 LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
+ GL C E+A CF +M+E P
Sbjct: 551 IDGL---------------------------------CQAHKHENAFGCFTEMVEWDVPP 577
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
NV+ Y+ LI ++C V ++ L+++M HG P +FN ++ G + A KL
Sbjct: 578 NVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLF 637
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ +R G P + Y LIK+LC+ G A + + M G PD T
Sbjct: 638 DSMLR---LGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYT 686
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 157/387 (40%), Gaps = 62/387 (16%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P ++ ++ A K +L A + ++ S VPD T ++ +C
Sbjct: 226 NPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVC---------- 275
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
RLG V R +K+ME G PNV TY ILI + A V MK
Sbjct: 276 ---------RLGVVDEALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMK 326
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ N T +L+ G+ D ++L + K+G + +++LY L +
Sbjct: 327 ERNVVPNEATMRSLVHGVFRCIAPDKAFELLLEFVERKQGITQLVC--DNILYCLSNNSM 384
Query: 324 QDEALEYLKQMEK----------------------------LFPRAVDRSLK-------- 347
EA+ +L + K +F V +K
Sbjct: 385 ASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLT 444
Query: 348 -ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G +E R D++I +G + N+ Y+ +I C+ + + ASE+ +++ G
Sbjct: 445 LIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRG 504
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+NT++ G CR GN+ A +L+E + R P ++ LI LC+ +
Sbjct: 505 ISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFR---PDIFTFNSLIDGLCQAHKHE 561
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLIC 493
+A +MV + P+ +T+N +LIC
Sbjct: 562 NAFGCFTEMVEWDVPPNVITYN-ILIC 587
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 184/386 (47%), Gaps = 31/386 (8%)
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
LH++ + GV P + +N L+ + ++GK+ AR++ +M +P VTF+ L+ CK
Sbjct: 231 LHLLDA-GVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 289
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------- 212
+L NA L G PDV T ++ LC GR+ DA+E+ EE E+G
Sbjct: 290 ASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 349
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G V G EM +G ++ YN L++ +C + +A D+ +M+
Sbjct: 350 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR 409
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
DG+ + VTY TLI G C G +D +++ Q M D EG Y +++ GL + +
Sbjct: 410 KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSD--EGVALDDVTYTALISGLSKAGR 467
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+A L +M + L P ++ I FC +G+V+ + +M +G P +V Y+
Sbjct: 468 SVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNV 527
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
+++ +C +++ A L+ M G P T+N +L G C+ G V +L
Sbjct: 528 VMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKS------ 581
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQS 467
+G + G Y+ LI +K +S
Sbjct: 582 AKGMVSDFGVYTSLINEFVKKKSAKS 607
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 57/338 (16%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PP+ F ++R + R+ + D + R + P++ FN+++ + K D++ A A
Sbjct: 239 PPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANA 298
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
R M +G+ D YTY ++GLC T R+ D ++ M RG+ PN+V+ TLI +
Sbjct: 299 L-RGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAH 357
Query: 127 CKNGKVGRARSLMSDME---------------------------------------EPND 147
CK G V L +M +P+
Sbjct: 358 CKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDK 417
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
VT++ LI CKE L A+ + ++ G D VT T ++ L GR +DA IL E
Sbjct: 418 VTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCE 477
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
E G + G VK G + LKEM+ KG P + TYN++++ +C G
Sbjct: 478 MMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQ 537
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ +A + N M G+ N +TY+ L+ G C G++ D
Sbjct: 538 MKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVRD 575
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 9/282 (3%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
RL V F + G P +N+L+ +G L SA +VF++M G+ V
Sbjct: 219 RLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVV 278
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
T++TL+ G+C +++ + LM +K G + Y + + GL + + +A+E +
Sbjct: 279 TFNTLMSGMCKASDLNNANALRGLM--AKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 336
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+M L P V + I C +G+V +M G ++V Y+ L++ +C+
Sbjct: 337 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 396
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGS 449
++ A+++++EM G P T+ T++ G C++G + TA+++ +E G+ +
Sbjct: 397 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDV--- 453
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI L + G A +L +M+ G+ PD T+ ++
Sbjct: 454 -TYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVI 494
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 182/381 (47%), Gaps = 34/381 (8%)
Query: 72 MMASGVQGDDYTYAI-----LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++A G + D T + L+ G C + V + ++ VM G+ PN V + LIH
Sbjct: 24 LLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGY 83
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+G+ + +L M EPN T++IL+ +C+ A +L E+ + G +V
Sbjct: 84 FIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNV 143
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V+ ++ LC ++ DA ++LE M R+G P+V T+N+L
Sbjct: 144 VSYNTLIAGLCRYRKMKDATQLLEL-------------------MRREGIRPSVVTFNLL 184
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ Y + G + +AL N M++ G + VTY+ LI G C R D ++ + D KE
Sbjct: 185 VDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFC---RARDMIRANRAFSDMKE 241
Query: 303 -GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVED 359
G Y ++ REN D+A E MEK R+ +L C++GN++D
Sbjct: 242 RGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKD 301
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A++ F + E+G VIYD LI+ Y +E +A +L+ EM G++P ++++ +
Sbjct: 302 ARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIR 361
Query: 420 GLCRQGNVGTALKLVEEDMRG 440
LC G A L+++ +R
Sbjct: 362 ILCNDGKCSEAEALIDDMVRA 382
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 171/373 (45%), Gaps = 33/373 (8%)
Query: 123 IHSLCKNGKVGRARSLMSDMEEPNDVTFSILIC-----AYCKEENLVNALVLLEKSFSFG 177
+ L G+V A +L++ + D T + C YC+ ++ A + + G
Sbjct: 9 VRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLG 68
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P+ VT T ++ GR + + E+ R+G ++ PN+
Sbjct: 69 LTPNEVTFTALIHGYFIHGRREKGLALFEKM----RIGGIE---------------PNLY 109
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYNIL+ +C TG + A +F +M GI+ N V+Y+TLI GLC ++ D ++L+LM
Sbjct: 110 TYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELM 169
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDG 355
+EG + + +N ++ G + + AL + QM P AV + I GFC
Sbjct: 170 R--REGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRAR 227
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
++ A R F M E G P V Y LI A+ +E + +A E+ M G T+
Sbjct: 228 DMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYG 287
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
++ LC +GN+ A KL + IG +G G+ Y LI +G A L+++
Sbjct: 288 VLVHALCMEGNMKDARKLFQS----IGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIME 343
Query: 475 MVGKGILPDYLTW 487
M KG +P+ ++
Sbjct: 344 MRKKGFVPNSASY 356
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 170/387 (43%), Gaps = 29/387 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD-VLVKEDIDLARAFY 68
D + ++ G R+ + + + D++ R +TP+ F +++ + + A +
Sbjct: 37 DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM G++ + YTY IL+ C T L M ++G+ N V YNTLI LC+
Sbjct: 97 -EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCR 155
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K+ A L+ M P+ VTF++L+ Y K + NAL + G+ P VT
Sbjct: 156 YRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVT 215
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ C R D + R +M+ +G P TY ILI
Sbjct: 216 YNALIAGFC---RARDMIR----------------ANRAFSDMKERGLAPTKVTYTILID 256
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
++ +D A ++F M+ G+ + TY L+ LC G + D K+ Q + ++G
Sbjct: 257 AFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSI--GEKGL 314
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+ ++YG RE +A++ + +M K P + L I C DG +A+
Sbjct: 315 QVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEA 374
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQE 389
D M+ G + + L++A ++
Sbjct: 375 LIDDMVRAGVQTSESVRQVLLNAKARQ 401
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G+C G+V +A+R FD M G PN V + LIH Y R + L ++M G
Sbjct: 45 VHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGI 104
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P T+N ++ CR G A L EE +GI R + Y+ LI LC +
Sbjct: 105 EPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVS----YNTLIAGLCRYRKMK 160
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A+ LL M +GI P +T+N L+
Sbjct: 161 DATQLLELMRREGIRPSVVTFNLLV 185
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 8/150 (5%)
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+V L+H YC+ V EA + M G P TF ++ G G L L
Sbjct: 37 DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
E+ MR IG G P Y+ L+ C G F+ A +L +M KGI + +++N+L+ L
Sbjct: 97 EK-MR-IG-GIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGL 153
Query: 495 S-----QQTTWLLLLLLNEMVSFVMVVHEL 519
+ T LL L+ E + +V L
Sbjct: 154 CRYRKMKDATQLLELMRREGIRPSVVTFNL 183
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/551 (22%), Positives = 231/551 (41%), Gaps = 63/551 (11%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
M + P S + T+I + ++ + P++ +F +++ KE
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEG 217
Query: 61 -IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
+D A + +M +S + D Y + + +V +K H +++ G+KP+ V Y
Sbjct: 218 RVDSALSLL-DEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
++I LCK ++ A + +E+ P ++ +I Y A LLE+ +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGG 220
G +P V+ +L L +G+V +A+++ EE + R GK+
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
M++ G PNV T NI++ C++ LD A +F +M + + +T+ +LI G
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------ 334
L GR+DD K+ + M DS + + Y S++ + ++++ + K M
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIV--YTSLIKNFFNHGRKEDGHKIYKDMINQNCS 514
Query: 335 -------------------------------EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+ P A S+ I G G +
Sbjct: 515 PDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F M E+G V + Y+ +I +C+ +V +A +L++EM G+ P T+ +V+ GL +
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+ A L EE + YS LI + G A ++L +++ KG+ P+
Sbjct: 635 IDRLDEAYMLFEE---AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Query: 484 YLTWNSLLICL 494
TWNSLL L
Sbjct: 692 LYTWNSLLDAL 702
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 206/496 (41%), Gaps = 62/496 (12%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
+ P+ S + +I L RA ++ + D + + + P+++ N ++D L K + +D A
Sbjct: 373 AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + ++M D+ T+ L+ GL RV D +K+ M + NS++Y +LI +
Sbjct: 433 AMF-EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491
Query: 126 LCKNGKVGRARSLMSDMEEPN-----DVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
+G+ + DM N + + + C + K + E+ + FVP
Sbjct: 492 FFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMF-KAGEPEKGRAMFEEIKARRFVP 550
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
D + + ++ L G + E+ EQG + GKV + L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+EM+ KG P V TY +I + LD A +F + K I N V Y +LI G
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GRID+ IL+ E ++G + +NS+L L + + +EAL
Sbjct: 671 GRIDEAYLILE--ELMQKGLTPNLYTWNSLLDALVKAEEINEAL---------------- 712
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
CF M E PN V Y LI+ C+ + +A +EM
Sbjct: 713 -----------------VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P ++ T++SGL + GN+ A L + R G +P S Y+ +I+ L
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFD---RFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 465 FQSASMLLVQMVGKGI 480
A L + +G+
Sbjct: 813 AMDAFSLFEETRRRGL 828
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 179/410 (43%), Gaps = 29/410 (7%)
Query: 90 GLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EP 145
G N++ +G+ ++ +M+ +P Y TLI + +L M+ EP
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
F+ LI + KE + +AL LL++ S D+V ++
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF------------- 248
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
G++GKV +F E+E G P+ TY +I C+ LD A+++F ++ +
Sbjct: 249 ------GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
Y+T+I G S G+ D+ +L+ +GS + YN +L L + + D
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLE--RQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 326 EALEYLKQMEK-LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
EAL+ ++M+K P ++ I C G ++ A D M + G PNV + ++
Sbjct: 361 EALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
C+ +++ EA + +EM P TF +++ GL + G V A K+ E+ + R
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ S Y+ LIK G + + M+ + PD N+ + C+
Sbjct: 481 N---SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 10/289 (3%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
+ K++ G ++ M + P Y LI ++ D L +F M+ G
Sbjct: 145 KANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVH 204
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+ TLIRG GR+D L +L M+ S + I YN + + + D A ++
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD--IVLYNVCIDSFGKVGKVDMAWKFFH 262
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++E L P V + I C +++A F+ + + VP Y+ +I Y
Sbjct: 263 EIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EA L++ G +P +N +L+ L + G V ALK+ EE + + + P
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE----MKKDAAPNLS 378
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
Y+ LI LC G +A L M G+ P+ T N ++ +C SQ+
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQK 427
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 143/562 (25%), Positives = 247/562 (43%), Gaps = 84/562 (14%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L+ G C + +LL MK+ G P+ V YNTL++ CK G + A+ LM ++
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
EPN +T++ LI AYCK + L +AL + ++ VPDVVT T ++ LC G+V
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A + E E G + G V M +G +V Y L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ G+ ++A D+F + + + N VTY LI G C G ++ G +LQ ME+
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEK--- 256
Query: 304 SKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVED 359
I P Y+S++ G ++ +EA++ M K+ R + ++ + G +DG +
Sbjct: 257 ---HIFPNVIVYSSIVDGYTKKGLLNEAMDV---MRKMVQRNILPNVFVYGTLIDGYFKA 310
Query: 360 AKR-----CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
+R F +M G N + D ++ + R+ EA EL K+M G LP +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370
Query: 415 NTVLSGLCRQGNVGTALKLVEE---------------------------------DMRGI 441
+++ G + G A + +E MR +
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT 499
G P S ++ +I A C++G +A LL +M G+ P+ +T N L+ +C + +
Sbjct: 431 GLA--PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIE 488
Query: 500 WLLLLLLNEMVSFVMVVHELSAKEK-----RCKLRSLNHLAHGAGS-VWLGLRIHDTTHT 553
+ LLN+M+ VM H K K R + + H V +G+++ +T+
Sbjct: 489 K-TMDLLNDML--VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYN 545
Query: 554 FIIDRRVEIGHVFCSSSSLKDV 575
+I +G + ++ KD+
Sbjct: 546 TLISTFCRLGMIRRATLVFKDM 567
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 238/579 (41%), Gaps = 102/579 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
F +I G R I+ V+ + + P + +N++++ K + F KK+M
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCK----IGDLFTAKKLM 75
Query: 74 AS----GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++ + TY L+ C + + D + M + + P+ V Y +++ LCK+
Sbjct: 76 GEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GKV A+S+ +MEE PN +++ LI + KE N+ A VL + G DVV
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 186 TKVLELLCSVGRVMDAVE----ILEES------------GEQGRLGKVKGGCRFLKEMER 229
T +++ L G +A + +LEES +LG V G L+EME
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K PNV Y+ ++ Y + G+L+ A+DV M I N Y TLI G +
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLK 347
L + + M+ G + +S + L R + +EA E K M L P V+ +
Sbjct: 316 ALDLFKEMKS--RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373
Query: 348 ILGFCVDGNVEDAKRCFDQMIEE----------------------------------GGV 373
+ GF G DA +M E+ G
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLA 433
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+ ++ +I+AYC+E + A +L+ EM +G P + T N ++ LC G + + L
Sbjct: 434 PDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDL 493
Query: 434 VEEDMRGIGRGSLPGS---------------------------------GHYSPLIKALC 460
+ DM +G P + Y+ LI C
Sbjct: 494 LN-DMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
G + A+++ M+GKGIL D +T+N+L+ C+S
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSH 591
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 217/496 (43%), Gaps = 45/496 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD + T++ G + I D+ A L +S N+ P++ + +++D K
Sbjct: 50 PDIVTYNTLMNGFCK---IGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDA 106
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+ +M + D TY +M GLC + +V + + M+ GV PN Y TLI S
Sbjct: 107 LYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDS 166
Query: 126 LCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNA----LVLLEKSFSFG 177
L K G V A L M + V ++ L+ K NA VLLE+S
Sbjct: 167 LFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES---- 222
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
VP+ VT + +++ C +LG V G L+EME K PNV
Sbjct: 223 LVPNCVTYSALIDGHC-------------------KLGDVNKGELLLQEMEEKHIFPNVI 263
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
Y+ ++ Y + G+L+ A+DV M I N Y TLI G + L + + M
Sbjct: 264 VYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEM 323
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
+ G + +S + L R + +EA E K M L P V+ + + GF G
Sbjct: 324 KS--RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
DA +M E+ +VV Y+ LI+ + + E+ M G P ++TFN
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFN 440
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
T+++ C++GN+G ALKL+ E M+ G P S + L++ LC G + LL M
Sbjct: 441 TMINAYCKEGNLGNALKLLNE-MKSYGLK--PNSITCNILVQRLCAAGEIEKTMDLLNDM 497
Query: 476 VGKGILPDYLTWNSLL 491
+ G P T ++L
Sbjct: 498 LVMGFHPTPTTHKAVL 513
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 138/582 (23%), Positives = 234/582 (40%), Gaps = 102/582 (17%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + ++ GL ++ + + + + P+ + +++D L KE ++A AF
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEG-NVAEAFV 178
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M+ G+ D Y LM GL + + V+ + PN V Y+ LI C
Sbjct: 179 LQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHC 238
Query: 128 KNGKVGRARSLMSDMEE---------------------------------------PNDV 148
K G V + L+ +MEE PN
Sbjct: 239 KLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVF 298
Query: 149 TFSILICAYCK-------------------EEN------LVNALV----------LLEKS 173
+ LI Y K EEN VN L L +
Sbjct: 299 VYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDM 358
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKV 217
S G +PD V T +++ G+ DA I +E E+ +LGK
Sbjct: 359 MSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY 418
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ F M + G P+ T+N +I++YC+ G L +AL + N+MK G+ N +T + L
Sbjct: 419 ESES-FHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNIL 477
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
++ LC+ G I+ + +L M G + + +VL + + D L Q+ +
Sbjct: 478 VQRLCAAGEIEKTMDLLNDM--LVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGM 535
Query: 338 FPRAVDRSLK---ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
+ +D S I FC G + A F M+ +G + +++ Y+ LIH YC +++
Sbjct: 536 GVK-LDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKK 594
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
A + +M G P T+N +L GL + A LV + RG +P + Y
Sbjct: 595 AFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE---RGLVPNATTYDI 651
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L+ + G + L +M+ KG +P T+N L+ C ++
Sbjct: 652 LVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAK 693
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 209/517 (40%), Gaps = 129/517 (24%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-----IDL 63
P+ ++ +++ G + ++N+ + + + N+ P++ ++ +++D K D +DL
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319
Query: 64 ARAFYR------------------------------KKMMASGVQGDDYTYAILMKGLCL 93
+ K MM+ G+ D Y +M G
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ D F + M + + V YN LI+ L K GK + S + M + P+ T
Sbjct: 380 AGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSAT 438
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV---MDAVE--- 203
F+ +I AYCKE NL NAL LL + S+G P+ +T +++ LC+ G + MD +
Sbjct: 439 FNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDML 498
Query: 204 -------------ILEESGEQGR--------------------------------LGKVK 218
+L+ S + R LG ++
Sbjct: 499 VMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIR 558
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
K+M KG L ++ TYN LI YC + L A V + M +G+S N TY+ L+
Sbjct: 559 RATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILL 618
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
GL + I + ++ M++ L
Sbjct: 619 GGLSAARLIKEAAGLVNQMKE-----------------------------------RGLV 643
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P A + + G GN+++ + + +MI +G VP Y+ LI + + +++ +A EL
Sbjct: 644 PNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKEL 703
Query: 399 MKEMTGHGYLPIASTFNTVLSG---LCRQGNVGTALK 432
M+EM G P +ST++ ++ G L +Q + +LK
Sbjct: 704 MQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLK 740
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 13/275 (4%)
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
R L + +V+ +N+LI YC G + A+++ MK +G + + VTY+TL+ G
Sbjct: 3 RHLNTYQHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGF 62
Query: 282 CSGGRIDDGLKILQLM-EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
C +I D +LM E S + + Y +++ + ++AL +M + L
Sbjct: 63 C---KIGDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLV 119
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V + + G C G VE+AK F +M E G VPN Y LI + +E V EA L
Sbjct: 120 PDVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVL 179
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI--GRGSLPGSGHYSPLI 456
M G + ++ GL + G A EDM + +P YS LI
Sbjct: 180 QGRMVVRGIGFDVVVYTALMDGLFKAGMANNA-----EDMFQVLLEESLVPNCVTYSALI 234
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+ G +LL +M K I P+ + ++S++
Sbjct: 235 DGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 181/428 (42%), Gaps = 37/428 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +++ G +A +D ++ + + +N +++ L K + +F+
Sbjct: 365 PDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFH 424
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
M G+ D T+ ++ C +G+ KLL+ MKS G+KPNS+ N L+ LC
Sbjct: 425 -TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCA 483
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ + L++DM P T ++ A K L + ++ G D+ T
Sbjct: 484 AGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLST 543
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKV----------------KGGCRFLKEME 228
++ C +G + A + ++ +G L + K +M
Sbjct: 544 YNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQML 603
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G PNV+TYNIL+ ++ A + N MK G+ N TYD L+ G G +
Sbjct: 604 TEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMK 663
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
+ +K+ E +G + YN ++ + + +A E +++M+ + P + +
Sbjct: 664 ECVKLY--CEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDI 721
Query: 347 KILG-FCVDGNVE-----------DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
I G + + E +AKR F++M E+G +P C+ + + +
Sbjct: 722 LICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKAD 781
Query: 395 ASELMKEM 402
A ++ ++
Sbjct: 782 AQRILNKL 789
>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
Length = 535
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 208/443 (46%), Gaps = 38/443 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + ++ GL +A + ++ + + P+L + ++D L K ++ A
Sbjct: 104 PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDV 163
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M+ G + D Y+ L+ GL RV + KL+ +M +RG P +V Y +++ LC
Sbjct: 164 F-EEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLC 222
Query: 128 KNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G++ A + +M T+S ++ Y + A ++E+ PD +
Sbjct: 223 KCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTI 282
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ T +E L S+GR +A ++ E M KGC P++ TY I+I
Sbjct: 283 SYTMFIEALYSIGRREEAEKVFET-------------------MVEKGCKPDMHTYGIII 323
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++C+ G + +A V M + N Y ++ G R+++ L++ Q + K+G
Sbjct: 324 DNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI--LKDG 381
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDRSLKILGFCVDGNVED 359
YN+V+ L + + DEALE L++M E+L P V S+ I G G V
Sbjct: 382 ILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL---GKVGM 438
Query: 360 AKRCFD---QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+R FD +MI+ G +P+ Y LI +V A EL++EM G P T+ T
Sbjct: 439 EERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGT 498
Query: 417 VLSGLCRQGNVGTALKLVEEDMR 439
++ LCR +V A L++E MR
Sbjct: 499 LVQILCRS-DVDAAWDLLQEMMR 520
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 234/503 (46%), Gaps = 46/503 (9%)
Query: 44 PSLKIFNSIL-DVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLC---------- 92
P++ FN +L ++D ++ A R+ M A G+ + T+ +++ LC
Sbjct: 27 PNVSSFNILLRGFAARDDFEVVNALLRE-MKARGITSNGATHGVILSALCARRDLDKAVS 85
Query: 93 -LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPND 147
+R + +L +++ P+SV Y ++ L K G +++ EP
Sbjct: 86 YFNSRTEEACRLFEAIEA----PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTL 141
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+T+++L+ CK + A + E+ G PD++ + +++ L GRV +A ++++
Sbjct: 142 LTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDL 201
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+G + G+++ + ++EM R+ P VDTY+ +++ Y G
Sbjct: 202 MIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 261
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
++ A V +M + + ++Y I L S GR ++ K+ + M ++G K + Y
Sbjct: 262 VEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM--VEKGCKPDMHTY 319
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
++ +E A L+ M+K + P ++ + GF +E+A + ++++
Sbjct: 320 GIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILK 379
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMT--GHGYLPIASTFNTVLSGLCRQGNV 427
+G +P+ V Y+ +I+A C+ +++ EA EL++EM P T++ ++ GL + G
Sbjct: 380 DGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGME 439
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A L+ E I G +P Y+ LI+ L G A LL +M+ GI PD T+
Sbjct: 440 ERAFDLLAE---MIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTY 496
Query: 488 NSLLICLSQQTTWLLLLLLNEMV 510
+L+ L + LL EM+
Sbjct: 497 GTLVQILCRSDVDAAWDLLQEMM 519
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 213/495 (43%), Gaps = 75/495 (15%)
Query: 50 NSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
NS+L LV+ + A F++ + V ++ IL++G + LL MK
Sbjct: 1 NSLLLALVRGGQLSDALGFFQSSISEPNVS----SFNILLRGFAARDDFEVVNALLREMK 56
Query: 109 SRGVKPNSVIYNTLIHSLCK-----------NGKVGRARSLMSDMEEPNDVTFSILICAY 157
+RG+ N + ++ +LC N + A L +E P+ VT++ ++
Sbjct: 57 ARGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGL 116
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
K N L EK + P ++T T +++ LC + KV
Sbjct: 117 FKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLC-------------------KAHKV 157
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ C +EM RKG P++ Y+ LI + G +D A + + M G V Y ++
Sbjct: 158 ERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSI 217
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
+ GLC GRI + +K +Q M + + R+ Y+ ++ G + +EA +++M
Sbjct: 218 VAGLCKCGRIQEAVKTIQEM--RRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADR 275
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE------ 389
P + ++ I G E+A++ F+ M+E+G P++ Y +I +C+E
Sbjct: 276 DCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAA 335
Query: 390 -----------------------------ERVREASELMKEMTGHGYLPIASTFNTVLSG 420
R+ EA EL + + G LP T+NTV++
Sbjct: 336 THVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINA 395
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC+ + AL+L+ E M+ P YS +I L + G + A LL +M+ G+
Sbjct: 396 LCKLKKMDEALELLRE-MQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGV 454
Query: 481 LPDYLTWNSLLICLS 495
+PD T+ SL+ L+
Sbjct: 455 IPDCFTYTSLIQTLA 469
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 232/492 (47%), Gaps = 37/492 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P+ +IF +I + I +V KA +L +R + P++ I N +L K+++ L
Sbjct: 360 PNVAIFSVLIEWCSK---IGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNL-LEN 415
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A+ TY I++ LC +V + L M +G+ P+ V YN +I
Sbjct: 416 AYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILG 475
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK G + A +M+ + E PN +T++IL+ K+ + +A + ++ + G VP
Sbjct: 476 HCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPT 535
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T ++ LC VGRV +A + L F+K+ +P TYN
Sbjct: 536 DYTFNSIINGLCKVGRVSEARDKLN---------------TFIKQ----SFIPTSMTYNC 576
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I Y + G +DSA V+ +M IS N +TY +LI G C ++D LK+ M+ +
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMK--R 634
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
+G + I+ Y +++ G + + A ++ ++ + L P + ++ I + N+E
Sbjct: 635 KGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEA 694
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A +MI ++ IY LI +E ++ A +L EM G +P +N +++
Sbjct: 695 ALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLIN 754
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLC G + A K+++E G P Y+ LI ++G Q A L +M+ KG
Sbjct: 755 GLCNHGQLENAGKILKE---MDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811
Query: 480 ILPDYLTWNSLL 491
++PD T++ L+
Sbjct: 812 LVPDDTTYDILV 823
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 139/538 (25%), Positives = 237/538 (44%), Gaps = 61/538 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + + VI+ + R ++ K + PS + +++ V+ + A
Sbjct: 256 DAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLG-NFGEALRL 314
Query: 70 K-KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K +M+ S V + L+KG C+ V +L + GV PN I++ LI K
Sbjct: 315 KDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSK 374
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G V +A L + M+ +P + L+ + K+ L NA +LL+ + G + VVT
Sbjct: 375 IGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG-IASVVT 433
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGR-----------LGKVKGGC-----RFLKEME 228
VL LC +G+V +A + ++ +G LG K GC + +
Sbjct: 434 YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII 493
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G PN TY IL+ + G + A ++F+ M GI T++++I GLC GR+
Sbjct: 494 ESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVS 553
Query: 289 DGL-KILQLMEDS----------------KEGS------------KGRISP----YNSVL 315
+ K+ ++ S KEG+ + ISP Y S++
Sbjct: 554 EARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLI 613
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
G + N+ D AL+ M++ L + I GFC ++E+A + F +++E G
Sbjct: 614 NGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLT 673
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN ++Y+ +I AY + A L KEM + + +++ GL ++G + AL L
Sbjct: 674 PNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDL 733
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
E + RG +P Y+ LI LC G ++A +L +M G I P L +N+L+
Sbjct: 734 YSE---MLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLI 788
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 212/490 (43%), Gaps = 35/490 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDI--DLARAF 67
D +F ++ RA I + V+ + + P + N +L +++ ++ D R F
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M + GD YT +LM+ + + + RG+K ++ Y+ +I ++C
Sbjct: 211 --DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVC 268
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ + A L+ EE P++ T++ +I A + N AL L ++ +V
Sbjct: 269 RGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVA 328
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C G V A+ R E+ G PNV +++LI
Sbjct: 329 VATSLIKGYCVRGDVNSAL-------------------RLFDEVVEVGVTPNVAIFSVLI 369
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ G ++ A +++ MK G+ + L++G +++ L++ + E
Sbjct: 370 EWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAY---LLLDGAVEN 426
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN VL L + +EA +M + + P V + ILG C G ++DA
Sbjct: 427 GIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAH 486
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +IE G PN + Y L+ ++ A + +M G +P TFN++++GL
Sbjct: 487 EVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGL 546
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ G V A + ++ + +P S Y+ +I ++G SA + +M I
Sbjct: 547 CKVGRVSEARDKLNTFIK---QSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEIS 603
Query: 482 PDYLTWNSLL 491
P+ +T+ SL+
Sbjct: 604 PNVITYTSLI 613
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 148/346 (42%), Gaps = 29/346 (8%)
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
F+ L+ +Y + + A+ G VP V + +L + V DA + +E
Sbjct: 155 FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMA 214
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
E+ ++ G C L+ + R CL + G A F G+
Sbjct: 215 ER----RIYGDCYTLQVLMR-ACL--------------KGGKFVEAERYFGQAAGRGLKL 255
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
+ +Y +I+ +C G +D K+++ D + G Y +V+ R EAL
Sbjct: 256 DAASYSIVIQAVCRGSDLDLASKLVE--GDEELGWVPSEGTYAAVIGACVRLGNFGEALR 313
Query: 330 YLKQM-EKLFPR--AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+M + P AV SL I G+CV G+V A R FD+++E G PNV I+ LI
Sbjct: 314 LKDEMVDSRVPVNVAVATSL-IKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWC 372
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ V +A+EL M G P N +L G +Q + A L++ G +
Sbjct: 373 SKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLD----GAVENGI 428
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
Y+ ++ LCE G A L +M+GKGI P +++N +++
Sbjct: 429 ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMIL 474
>gi|224076898|ref|XP_002305039.1| predicted protein [Populus trichocarpa]
gi|222848003|gb|EEE85550.1| predicted protein [Populus trichocarpa]
Length = 800
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 131/530 (24%), Positives = 231/530 (43%), Gaps = 74/530 (13%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRK 70
++ +++ A M+++ + A + R P + FN +++ L+ +D A A Y K
Sbjct: 165 QVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIY-K 223
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
++ + G+ +DYTY+I++K C + + + M+ GV PN+ Y T I LC N
Sbjct: 224 QLKSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCANQ 283
Query: 131 -----------------------------------KVGRARSLMSDMEEPNDVT----FS 151
K+ RA ++ DME+ ++ +S
Sbjct: 284 RSDFGYQVLQAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYS 343
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
LI YCK +L AL L S G + V ++ +L+ C G VE
Sbjct: 344 ELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVE-------- 395
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+ K FL E+ +YNI++ + C+ +D A+ + ++MK + +
Sbjct: 396 -EFKRFKDLRIFLDEV----------SYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDI 444
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL--- 328
+ Y TLI G C G++ D ++ + ME +G + + +N +L R +EAL
Sbjct: 445 MHYTTLINGYCHVGKLVDAFRVFEEMEG--KGLEPDVVTFNILLAAFSRRGLANEALKLY 502
Query: 329 EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
EY+K + L P A+ ++ I G C+ G V +A+ F M E+ + N Y +I YC+
Sbjct: 503 EYMKS-QDLKPNAITHNVMIEGLCIGGKVTEAEAFFCNM-EDKSIDN---YGAMITGYCE 557
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ +ASEL E++ G L +L LC +G AL L++ + P
Sbjct: 558 AKHTEKASELFFELSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKT---MLDLNMEPS 614
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL-ICLSQQ 497
Y +I A G ++A + + G+ PD T+ +++ +C Q
Sbjct: 615 KDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQN 664
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 179/424 (42%), Gaps = 47/424 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARAF 67
DE + V+ L + ++ V D + M + + ++++ V + +D R F
Sbjct: 408 DEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVF 467
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M G++ D T+ IL+ + KL MKS+ +KPN++ +N +I LC
Sbjct: 468 --EEMEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLC 525
Query: 128 KNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
GKV A + +ME+ + + +I YC+ ++ A L + G + D I K
Sbjct: 526 IGGKVTEAEAFFCNMEDKSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYK 585
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+LE LC E GE+ R LK M P+ D Y +I++
Sbjct: 586 LLEKLC-------------EEGEKDR------ALWLLKTMLDLNMEPSKDMYGKVITACY 626
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G + +A VF+ ++ G++ + TY T+I C R+ + + Q M+ G K
Sbjct: 627 RAGDMRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMK--HRGIKPD 684
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ + +L G ++++ A R K + A + +M
Sbjct: 685 LVTFTVLLDG---------------HLKRVHSEAFARKRKEVNLA-------ASNIWKEM 722
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
P+V+ Y LI +C+ +R+ +A L EM G P +T +LSG +G+V
Sbjct: 723 QNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTALLSGCRNRGDV 782
Query: 428 GTAL 431
L
Sbjct: 783 DMVL 786
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ Y+ L+ SY G+LD A++ +K G + T++ L+ L + G++D L I +
Sbjct: 164 IQVYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYK 223
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCV 353
++ G Y+ ++ R+ EA ++ME + P A + I G C
Sbjct: 224 QLKSL--GLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIEGLCA 281
Query: 354 DGNVEDAKRCFDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
+ + + Q +EG +P +V Y +I +C E ++ A ++ +M + A
Sbjct: 282 NQRSDFGYQVL-QAWKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDAR 340
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
++ ++ G C+ G++ AL L DM +G S +++ CEKG
Sbjct: 341 CYSELIRGYCKAGDLSKALAL-HNDME--SKGIKTNCVIVSTILQYFCEKG 388
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 127/321 (39%), Gaps = 37/321 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD F ++ R + N+ +K + + ++ P+ N +++ L + + A AF
Sbjct: 477 PDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGKVTEAEAF 536
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M + Y ++ G C +L + RG+ + L+ LC
Sbjct: 537 F-CNMEDKSIDN----YGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYKLLEKLC 591
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G+ RA L+ M EP+ + +I A + ++ NA + + G PD+
Sbjct: 592 EEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGDMRNAEAVFDILRKSGLTPDIF 651
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG--------------RLGKVK----------- 218
T T ++ + C R+ +A + ++ +G L +V
Sbjct: 652 TYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTVLLDGHLKRVHSEAFARKRKEV 711
Query: 219 --GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
KEM+ P+V Y LI +C+ L+ A+ ++++M G+ + T
Sbjct: 712 NLAASNIWKEMQNTEIRPDVICYTALIDGHCKVDRLEDAIGLYDEMMYRGVEPDRATCTA 771
Query: 277 LIRGLCSGGRIDDGLKILQLM 297
L+ G + G +D L L L+
Sbjct: 772 LLSGCRNRGDVDMVLTKLNLI 792
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 207/496 (41%), Gaps = 77/496 (15%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K MM G D TY+ ++ LC +V F L MKS GV P+ Y LI S CK
Sbjct: 277 KVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKA 336
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +ARS +M N VT++ L+ AY K + L A + + G P+ +T
Sbjct: 337 GLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITY 396
Query: 186 TKVLELLCSVGRVMDAVEILEE-SGEQGRLGK----------------------VKGGCR 222
+ +++ LC G + A E+ + G +G + G C+
Sbjct: 397 SALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCK 456
Query: 223 ---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
L M GC PN Y+ LI +C+ G +D+A +VF M G T
Sbjct: 457 AHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHT 516
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
Y +LI + R+D +K+L M +S + Y +++ GL R + +AL+ L
Sbjct: 517 YTSLIDAMFKDRRLDLAMKVLSQMVES--SCTPNVVTYTAMIDGLCRIGECQKALKLLSM 574
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
ME+ P V + I G G V+ + + F QM +G PN V Y LI+ C
Sbjct: 575 MEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGL 634
Query: 392 VREASELMKEMT---------------------------------GHGYLPIASTFNTVL 418
+ EA L+ EM HG +PIA + ++
Sbjct: 635 LDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLI 694
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
+ G + AL+L +E M ++ Y+ LI+ALC + A L ++ K
Sbjct: 695 DNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRK 754
Query: 479 GILPDYLTWNSLLICL 494
G++P+ S+ +CL
Sbjct: 755 GVVPEL----SVFVCL 766
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 197/453 (43%), Gaps = 49/453 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY L+ G ++G +++++M G PN ++N+L+HS C A L+ M
Sbjct: 144 TYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRM 203
Query: 143 EE----PNDVTFSILICAYCKEENLVNA--LVLLEKSF----SFGFVPDVVTITKVLELL 192
+ P V ++I I + C E L + L L EK + + V + V L
Sbjct: 204 ADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCL 263
Query: 193 CSVGRVMDAVEILEESGEQGRLG----------------KVKGGCRFLKEMERKGCLPNV 236
C +G+ A +I++ +G + KV+ +EM+ G P+V
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY ILI S+C+ G+++ A F++M+ G S N VTY L+ ++ I
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL------------------KQMEKLF 338
M D+ G Y++++ GL + + +A E K + +
Sbjct: 384 MIDA--GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIA 441
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V I G C V DA+ D M+ G PN +IYD LI +C+ ++ A E+
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
M+ GYLP T+ +++ + + + A+K++ + + P Y+ +I
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQ---MVESSCTPNVVTYTAMIDG 558
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC G Q A LL M KG P+ +T+ +L+
Sbjct: 559 LCRIGECQKALKLLSMMEEKGCSPNVVTYTALI 591
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 198/435 (45%), Gaps = 51/435 (11%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + ++ GL +A ++ KA ++ ++ L+ ++ F
Sbjct: 390 PPNTITYSALVDGLCKA---GEIQKACEVYTK----------------LIGTSDNVGSDF 430
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y + + + TY L+ GLC ++V D +LL M S G +PN +IY+ LI C
Sbjct: 431 YFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFC 490
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK+ A+ + M + P T++ LI A K+ L A+ +L + P+VV
Sbjct: 491 KVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVV 550
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T T +++ LC R+G+ + + L ME KGC PNV TY LI
Sbjct: 551 TYTAMIDGLC-------------------RIGECQKALKLLSMMEEKGCSPNVVTYTALI 591
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
++G +D +L +F M G + N+VTY LI C+ G +D+ +L M+ +
Sbjct: 592 DGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYW- 650
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y SV+ G ++ +L L+++E P A L I F G +E+A
Sbjct: 651 -PKYLQGYCSVVQGFSKKFIA--SLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEAL 707
Query: 362 RCFDQMIEEGGVPNVV---IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
+M+E N+ +Y LI A C ++ +A EL E+T G +P S F ++
Sbjct: 708 ELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLI 767
Query: 419 SGLCRQGNVGTALKL 433
GL + AL+L
Sbjct: 768 KGLIKVNKWNEALQL 782
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 184/454 (40%), Gaps = 40/454 (8%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G + TY L++ L ++ GF++ M G + +LCK G+ A
Sbjct: 35 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA 94
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVN-ALVLLEKSFSFGFVPDVVTITKVLELLC- 193
++ + D + + E +L + A+ L + +P+VVT +L
Sbjct: 95 LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154
Query: 194 --SVGRVMDAVEILEESGEQGRL----GKVKGGC---------RFLKEMERKGCLPNVDT 238
+G + ++ + G V C + LK M GC P
Sbjct: 155 KKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVA 214
Query: 239 YNILISSYC------ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
YNI I S C +L A V+ +M N V R LC G+ D +
Sbjct: 215 YNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQ 274
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
I+++M +G S Y+ V+ L + ++A ++M+ + P ++ I
Sbjct: 275 IIKVMMG--KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDS 332
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC G +E A+ FD+M G NVV Y L+HAY + +++ +AS++ M G P
Sbjct: 333 FCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPN 392
Query: 411 ASTFNTVLSGLCRQGNVGTALKL----------VEEDMRGIGRGS---LPGSGHYSPLIK 457
T++ ++ GLC+ G + A ++ V D G+ + P Y LI
Sbjct: 393 TITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALID 452
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC+ A LL M+ G P+++ +++L+
Sbjct: 453 GLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALI 486
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 124/294 (42%), Gaps = 15/294 (5%)
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
E++ G P+ TYN L+ G +D V +M G + T + LC G
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVD 343
R D L +++ +E K ++ GL + DEA+ +L +M P V
Sbjct: 90 RWSDALVMIE-----REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ GF + KR + M++EG PN +++ L+H+YC A +L+K M
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTA--LKLVE---EDMRGIGRGSLPGSGHYSPLIKA 458
G P +N + +C + + L L E E+M + + + + +
Sbjct: 205 DCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEM--LASSCVLNKVNTANFARC 262
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ-TTWLLLLLLNEMVS 511
LC G F A ++ M+GKG +PD T++ ++ L + LL EM S
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKS 316
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 146/338 (43%), Gaps = 28/338 (8%)
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGR-LGKVKGGCRFLKEMERKGCLP 234
FG+ P T ++++L + G++ + +E E G + K GC F + + ++G
Sbjct: 34 FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGC-FAQALCKEGRWS 92
Query: 235 N-----------VDTY--NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
+ +DT +IS E + D A+ + M+ + N VTY TL+ G
Sbjct: 93 DALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGF 152
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFP 339
++ +I+ +M KEG S +NS+++ A + LK+M P
Sbjct: 153 LKKKQLGWCKRIINMM--MKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPP 210
Query: 340 RAVDRSLKILGFCVDGNVED------AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
V ++ I C + A++ +++M+ V N V C +
Sbjct: 211 GYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFD 270
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS 453
A +++K M G G++P ST++ V++ LC V A L +E M+ +G P Y+
Sbjct: 271 MAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQE-MKSVGVN--PDVYTYT 327
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LI + C+ G + A +M G + +T+ +LL
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALL 365
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 128/319 (40%), Gaps = 58/319 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ I+ +I G + I++ + +S+ P++ + S++D + K+ +DLA
Sbjct: 477 PNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKV 536
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ S + TY ++ GLC KLL +M+ +G PN V Y LI L
Sbjct: 537 L-SQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLG 595
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILI---CA------------------------ 156
K+GKV + L M PN VT+ +LI CA
Sbjct: 596 KSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQ 655
Query: 157 -YCK-----EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
YC + + +L LLE+ S G VP +++ GR+ +A+E+ +E E
Sbjct: 656 GYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMME 715
Query: 211 QGR-------------------LGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+++ E+ RKG +P + + LI +
Sbjct: 716 LSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNK 775
Query: 252 LDSALDVFNDMKIDGISWN 270
+ AL + + +G++W
Sbjct: 776 WNEALQLCYSICDEGVNWQ 794
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 198/444 (44%), Gaps = 29/444 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K+ SG + TY+ + GLC V L+ + NS +N +I+ CK G
Sbjct: 346 KIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRG 405
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A ++ +M+ P+ ++SILI A+C + +++ L L+E+ P +V+ T
Sbjct: 406 EVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYT 465
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC + +AV+I G G + + L+EM
Sbjct: 466 SLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICN 525
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
+P + LI Y + G+ D AL+VFN M DGI + + + ++ G C G +
Sbjct: 526 ELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEA 585
Query: 291 LKILQLMEDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
L L+ED +E G YN+++Y L +E + ALE L +M K + P V+ S
Sbjct: 586 L---TLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTL 642
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I GF N + A F +M++ G N+ Y L+ + ++ EA + KEM G
Sbjct: 643 ISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGL 702
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
++ T++ G C + A L EE R G P Y+ +I C+
Sbjct: 703 CLDQISYTTLIVGFCNNREMKKAWALFEEMSR---EGCSPNVITYTCIIDGFCKSNRIDL 759
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A+ + +M ++PD +T+ L+
Sbjct: 760 ATWVFDKMNRDSVIPDVVTYTVLI 783
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 197/437 (45%), Gaps = 46/437 (10%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN------ 129
G++ D T L+K L NRV ++ +K RG PN Y +++ C +
Sbjct: 277 GLEPDIRTCNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAG 336
Query: 130 --------GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
GK+ R+ E+P VT+S I CK N+ AL+L+ +
Sbjct: 337 MRQAAVILGKIYRSG------EKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLN 390
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ V+ C G V +A+++LE EM+ G LP+V +Y+I
Sbjct: 391 SHSFNDVIYGFCKRGEVFEALQVLE-------------------EMKSSGILPDVYSYSI 431
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI+++C G + LD+ +M+ I + V+Y +LI GLC + + + I + S
Sbjct: 432 LINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGAS- 490
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
K + Y +++ G + D A++ L++M +L P A I G+ G +
Sbjct: 491 -SCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQ 549
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A F+ M+ +G P+ + + ++ C+ +EA L+++ HG+ ++N ++
Sbjct: 550 ALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIY 609
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
LC++G AL+L+ R + R LP +YS LI ++ F+ A L +MV G
Sbjct: 610 KLCKEGYPERALELLP---RMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVG 666
Query: 480 ILPDYLTWNSLLICLSQ 496
I + T+ L+ S
Sbjct: 667 ITFNIATYTILMSIFSH 683
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 166/388 (42%), Gaps = 24/388 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M +SG+ D Y+Y+IL+ C V L+ M+ +KP+ V Y +LIH LCK
Sbjct: 415 EEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKK 474
Query: 130 GKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ A S+ + + + + LI +C + ++ +A+ LLE+ VP +
Sbjct: 475 NMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSC 534
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
++ +G A+E+ G R G K L++ +
Sbjct: 535 RSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQE 594
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G N +YN +I C+ G + AL++ M + + V Y TLI G
Sbjct: 595 HGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKR 654
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+ + M K G I+ Y ++ ++ EA K+M++ L + +
Sbjct: 655 AVNLFTRM--VKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTL 712
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I+GFC + ++ A F++M EG PNV+ Y C+I +C+ R+ A+ + +M
Sbjct: 713 IVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSV 772
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVE 435
+P T+ ++ + G A KL +
Sbjct: 773 IPDVVTYTVLIDWYHKHGYFDQAHKLYD 800
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 181/437 (41%), Gaps = 24/437 (5%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
H P + F VI G + + + ++ + + + P + ++ +++ +
Sbjct: 383 HYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDV 442
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ ++M S ++ +Y L+ GLC N + + + H + + K +S +Y TL
Sbjct: 443 MKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETL 502
Query: 123 IHSLCKNGKVGRARSLMSDM--EEPNDVTFSI--LICAYCKEENLVNALVLLEKSFSFGF 178
I C G + A L+ +M E FS LI Y K AL + G
Sbjct: 503 IDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGI 562
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCR 222
PD + +L+ C G +A+ +LE+ E G + G +
Sbjct: 563 WPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALE 622
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
L M ++ LP+V Y+ LIS + + A+++F M GI++N TY L+
Sbjct: 623 LLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFS 682
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPR 340
++ + I + M++ + +IS Y +++ G + +A ++M E P
Sbjct: 683 HSHKMHEAYGIFKEMKE-RGLCLDQIS-YTTLIVGFCNNREMKKAWALFEEMSREGCSPN 740
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + I GFC ++ A FD+M + +P+VV Y LI Y + +A +L
Sbjct: 741 VITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYD 800
Query: 401 EMTGHGYLPIASTFNTV 417
M G LP T N +
Sbjct: 801 VMKDKGVLPDDITHNVL 817
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 178/364 (48%), Gaps = 27/364 (7%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M++ G D +TY L+ GLC + +L++ M+ +G +PN + Y LI CK
Sbjct: 2 HESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCK 61
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ AR+++ +M N V ++ LI A CK+E + +AL + S G PD+ T
Sbjct: 62 EGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFT 121
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC V + +A+ + + +M +G + N TYN LI
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQ-------------------DMLLEGVIANTITYNTLIH 162
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
++ G + AL + NDM G + +TY+ LI+ LC G I+ GL + + M SK +
Sbjct: 163 AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM-SKGLN 221
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
IS N ++ GL R ALE+L+ M L P V + I G C G ++A
Sbjct: 222 PNNISC-NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALN 280
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
FD++ EG P+ + Y+ LI +C+E +A L+ G++P T+ ++S
Sbjct: 281 LFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFI 340
Query: 423 RQGN 426
++G+
Sbjct: 341 KEGD 344
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 163/323 (50%), Gaps = 26/323 (8%)
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERK 230
E S G PD+ T ++ LC G ++ A E++ EM+ K
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELM-------------------NEMQIK 43
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
GC PNV TY ILI +C+ G L+ A +V ++M G++ N V Y+ LI LC ++ D
Sbjct: 44 GCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDA 103
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
L + M S +G K I +NS+++GL + N+ +EAL + M E + + + I
Sbjct: 104 LNMFGDM--SSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 161
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
F G +++A + + M+ G + + Y+ LI A C+ + + L ++M G
Sbjct: 162 HAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN 221
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P + N +++GLCR GN+ AL+ + DM I RG P Y+ LI LC+ G Q A
Sbjct: 222 PNNISCNILINGLCRTGNIQHALEFLR-DM--IHRGLTPDIVTYNSLINGLCKTGRAQEA 278
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L ++ +GI PD +T+N+L+
Sbjct: 279 LNLFDKLQVEGICPDAITYNTLI 301
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 168/348 (48%), Gaps = 32/348 (9%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ T++ LI CK+ LV+A L+ + G P+V+T T +++ C GR+ +A +
Sbjct: 12 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 71
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
L EM KG N YN LIS+ C+ + AL++F DM
Sbjct: 72 -------------------LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 112
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + T+++LI GLC + ++ L + Q M EG YN++++ R
Sbjct: 113 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM--LLEGVIANTITYNTLIHAFLRRGAM 170
Query: 325 DEALEYLKQMEKLFPRA----VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
EAL+ + M LF + + I C GN+E F+ M+ +G PN + +
Sbjct: 171 QEALKLVNDM--LFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCN 228
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMR 439
LI+ C+ ++ A E +++M G P T+N++++GLC+ G AL L ++ +
Sbjct: 229 ILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVE 288
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
GI P + Y+ LI C++G F A +LL + V G +P+ +TW
Sbjct: 289 GI----CPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTW 332
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 23/256 (8%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
+N ++ L K++ M + G + D +T+ L+ GLC N+ + L M
Sbjct: 87 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 146
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLV 164
GV N++ YNTLIH+ + G + A L++DM +D+T++ LI A C+ N+
Sbjct: 147 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 206
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
L L E S G P+ ++ ++ LC G + A+E FL
Sbjct: 207 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE-------------------FL 247
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
++M +G P++ TYN LI+ C+TG AL++F+ ++++GI + +TY+TLI C
Sbjct: 248 RDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKE 307
Query: 285 GRIDDGLKILQLMEDS 300
G DD +L DS
Sbjct: 308 GMFDDAHLLLSRGVDS 323
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 5/196 (2%)
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDA 360
G I YN+++ GL ++ A E + +M+ P + ++ I FC +G +E+A
Sbjct: 9 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 68
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ D+M +G N V Y+CLI A C++E+V++A + +M+ G P TFN+++ G
Sbjct: 69 RNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFG 128
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC+ AL L ++ + G + + Y+ LI A +G Q A L+ M+ +G
Sbjct: 129 LCKVNKFEEALGLYQDMLL---EGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185
Query: 481 LPDYLTWNSLLICLSQ 496
D +T+N L+ L +
Sbjct: 186 PLDDITYNGLIKALCR 201
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M+ G P++ Y+ LI C++ + A ELM EM G P T+ ++ C++
Sbjct: 3 ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A +++E G+G + Y+ LI ALC+ Q A + M KG PD
Sbjct: 63 GRLEEARNVLDEMS---GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDI 119
Query: 485 LTWNSLLICLSQ 496
T+NSL+ L +
Sbjct: 120 FTFNSLIFGLCK 131
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 200/429 (46%), Gaps = 29/429 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K+M ASG + + Y L+K +R GD ++L M+ +G+ P++ YN+LI L K
Sbjct: 444 KEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
K+ ARS + +M E P+ T+ I Y + +A +++ G +P+ V
Sbjct: 504 KKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC 563
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T ++ C G+V++A C + M +G L + TY +L++
Sbjct: 564 TGLINEYCKKGKVIEA-------------------CSAFRSMVEQGILGDAKTYTVLMNG 604
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ G ++ A ++F++M+ GI+ + +Y TLI G G + I M + G
Sbjct: 605 LVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM--VQAGLT 662
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQME-KLFP-RAVDRSLKILGFCVDGNVEDAKRC 363
+ YN +L G R + ++A E L +M K FP AV I G+C G++ +A +
Sbjct: 663 SNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQL 722
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
FD+M +G VP+ +Y L+ C+ V A + E G ++ FN +++ + +
Sbjct: 723 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFK 781
Query: 424 QGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G ++ M G + P Y+ +I LC++G ++A L M ++P
Sbjct: 782 FGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841
Query: 483 DYLTWNSLL 491
+T+ SLL
Sbjct: 842 TVITYTSLL 850
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 224/507 (44%), Gaps = 33/507 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ I+ T+I+ + D V+ + + P +NS++ L K + +D AR+F
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSF 512
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ +G + D +TY + G K + M GV PN V+ LI+ C
Sbjct: 513 LLE-MVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GKV A S M E + T+++L+ K + +A + + G PDV
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ +++ +G + A I +E + G R G+++ L EM
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG PN TY +I YC++G L A +F++MK+ G+ + Y TL+ G C R+
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCC---RL 748
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLF-----PRA 341
+D + + + E +++G +P+N+++ +++ + + + + + M+ F P
Sbjct: 749 NDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPND 808
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ I C +GN+E AK F M + +P V+ Y L++ Y + R E + E
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRGIGRGSLPGSGHYSPLIKAL 459
+ G P ++ +++ ++G AL L+++ + G L+
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGF 928
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLT 486
+ G + A ++ MV +PD T
Sbjct: 929 AKVGEMEVAEKVVENMVRLKYIPDSST 955
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 227/509 (44%), Gaps = 67/509 (13%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ PS + +N ++D L K+ ++ A++ + M + G+ D+ Y+IL+ GL L R D
Sbjct: 276 LVPSRQSYNLLIDGLCKQKRLEDAKSLLVE-MNSVGLFADNVAYSILIDGL-LKGRNADA 333
Query: 101 FK-LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILIC 155
L+H M S G + ++Y+ I + K G + +A++L M P ++ LI
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIE 393
Query: 156 AYCKEENLVNALVLLEK---------SFSFGFV--------------------------P 180
+ +E+N+ LL + +++G P
Sbjct: 394 GFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRP 453
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+VV T +++ R DAV +L+E EQG + K+ FL
Sbjct: 454 NVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFL 513
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM G P+ TY IS Y E G SA +M G+ N V LI C
Sbjct: 514 LEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKK 573
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G++ + + M ++G G Y ++ GL + + ++A E +M + + P
Sbjct: 574 GKVIEACSAFRSM--VEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
I GF GN++ A FD+M++ G NV+IY+ L+ +C+ + +A EL+ EM
Sbjct: 632 SYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEM 691
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
+G G+ P A T+ T++ G C+ G++ A +L +E M+ +G +P S Y+ L+ C
Sbjct: 692 SGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDE-MK--LKGLVPDSFVYTTLVDGCCRL 748
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A + + + KG +N+L+
Sbjct: 749 NDVERA-ITIFETNEKGCASSSAPFNALI 776
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 202/484 (41%), Gaps = 85/484 (17%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L+ L NR+ + + M R V + Y LI + C++G V A+ ++ EE
Sbjct: 195 LLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEEL 254
Query: 145 -----------------------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
P+ ++++LI CK++ L +A LL + S G D
Sbjct: 255 GTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFAD 314
Query: 182 VVTITKVLELLCSVGRVMDAVEILEES--------------------GEQGRLGKVKG-- 219
V + +++ L GR DA L ++G + K K
Sbjct: 315 NVAYSILIDGLLK-GRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALF 373
Query: 220 ----------GCR--------FLKEME-RKG--CLPNVDTYNILISSY---------CET 249
G R F +E RKG L + NI+IS Y C +
Sbjct: 374 DGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSS 433
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G LD A ++ +M G N V Y TLI+ R D +++L+ M + +G
Sbjct: 434 GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMRE--QGIAPDTF 491
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YNS++ GL + + DEA +L +M E F P A I G+ G A + +M
Sbjct: 492 CYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM 551
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+E G +PN V+ LI+ YC++ +V EA + M G L A T+ +++GL + G V
Sbjct: 552 LECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKV 611
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A ++ E MR G+G P Y LI + G Q AS + +MV G+ + + +
Sbjct: 612 NDAEEIFHE-MR--GKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIY 668
Query: 488 NSLL 491
N LL
Sbjct: 669 NMLL 672
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 167/409 (40%), Gaps = 83/409 (20%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP------ 114
I+ AF + M+ G+ GD TY +LM GL +V D ++ H M+ +G+ P
Sbjct: 577 IEACSAF--RSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYG 634
Query: 115 -----------------------------NSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
N +IYN L+ C++G++ +A+ L+ +M
Sbjct: 635 TLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
PN VT+ +I YCK +L A L ++ G VPD T +++ C + V A
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA 754
Query: 202 VEILEESGEQG----------------RLGKVKGGC----RFLKEMERKGCLPNVDTYNI 241
+ I E + E+G + GK + R + K PN TYNI
Sbjct: 755 ITIFE-TNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNI 813
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I C+ G L++A ++F+ M+ + +TY +L+ G GR + +
Sbjct: 814 MIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFD------ 867
Query: 302 EGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL-------- 349
E I P Y+ ++ +E +AL L QM AVD K+
Sbjct: 868 EVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQM--FAKNAVDDGCKLSISTCRALL 925
Query: 350 -GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
GF G +E A++ + M+ +P+ LI+ C R A++
Sbjct: 926 SGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 135/297 (45%), Gaps = 32/297 (10%)
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVL---------------------DSALDVFNDMK 263
K M + + +V +Y +LI ++C G + D AL++ M
Sbjct: 213 KGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMS 272
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
G+ + +Y+ LI GLC R++D +L +E + G Y+ ++ GL +
Sbjct: 273 CKGLVPSRQSYNLLIDGLCKQKRLEDAKSLL--VEMNSVGLFADNVAYSILIDGLLKGRN 330
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCV---DGNVEDAKRCFDQMIEEGGVPNVVIYD 380
D A + +M ++D + CV +G +E AK FD MI G P Y
Sbjct: 331 ADAANGLVHEMVS-HGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYA 389
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI + +E+ VR+ EL+ E+ + T+ T + G+C G++ A +V+E
Sbjct: 390 SLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKE---- 445
Query: 441 IG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+G G P Y+ LIK +K F A +L +M +GI PD +NSL+I LS+
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSK 502
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 114/303 (37%), Gaps = 68/303 (22%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + T+I G K+ DL F + +K+
Sbjct: 697 PPNAVTYCTIIDGY---------CKSGDLAEAFQLFDEMKL------------------- 728
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
G+ D + Y L+ G C N V + +G +S +N LI+ +
Sbjct: 729 -------KGLVPDSFVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNALINWVF 780
Query: 128 KNGKVGRARSLMSDMEE--------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
K GK +++ + + PNDVT++I+I CKE NL A L +
Sbjct: 781 KFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLM 840
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P V+T T +L +GR + + + E+ G P+ Y
Sbjct: 841 PTVITYTSLLNGYDKMGRRSEMFSVFD-------------------EVIAAGIEPDNIMY 881
Query: 240 NILISSYCETGVLDSALDVFNDMKI-----DGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+++I+++ + G+ AL + + M DG + T L+ G G ++ K++
Sbjct: 882 SVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVV 941
Query: 295 QLM 297
+ M
Sbjct: 942 ENM 944
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 31/261 (11%)
Query: 239 YNILISSYCETGVLDSALDVFN---DMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ ILI Y E G LD A+ VF+ D+ +D + + + L+ L R+D
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVP-SLARCNHLLDALLKRNRLD------- 206
Query: 296 LMEDSKEGSKGR-----ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
L D +G R + Y ++ R+ A + L + E+ A
Sbjct: 207 LFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTAT-------- 258
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
NV++A M +G VP+ Y+ LI C+++R+ +A L+ EM G
Sbjct: 259 ----LNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFAD 314
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
++ ++ GL + N A LV E + G Y I + ++G + A
Sbjct: 315 NVAYSILIDGLLKGRNADAANGLVHE---MVSHGFSIDPMMYDYFICVMSKEGAMEKAKA 371
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
L M+ G+ P + SL+
Sbjct: 372 LFDGMITFGVTPGARAYASLI 392
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 213/469 (45%), Gaps = 69/469 (14%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N++L V VK ++ A F++ M + + D+ +Y LM G V L MK
Sbjct: 106 NNLLSVYVKARRVEDAHLFFQSHM-KNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMK 164
Query: 109 SRGVKPNSVI--YNTLIHSLCKNGKVGRARSLMSDME---EPNDVTFSILICAYCKEENL 163
G+ +V+ +N ++ LC GK+ A + DM PN ++++I+I CK +
Sbjct: 165 DSGI---AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKV 221
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A+ L ++ PDVVT +++ L RV +A ++ EE+
Sbjct: 222 DKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA--------------- 266
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLIRGLC 282
KGC P V TYN +I C+ G +++AL +++DM + + + TY LI GL
Sbjct: 267 ----RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
R + ++ + M D+ G + YN++L GL + +D+A+E ++M
Sbjct: 323 LSNRGEKAYELYEEMLDT--GCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGV------ 374
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
GNV D PNV+ Y LI +C+ +R+ +A +L KEM
Sbjct: 375 ------------GNVCD--------------PNVITYTVLIDRFCKVDRLGDAVKLAKEM 408
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G LP A TF TV+ LC++ + A +L E IG+ P S ++ ++ C+
Sbjct: 409 EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFE----SIGKTCKPDSVLFNTMLAGYCKI 464
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
A L +M+ G P T+ +L+ + + L++ +EM+
Sbjct: 465 TRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMI 513
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 172/355 (48%), Gaps = 36/355 (10%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
++ I+++GLC ++ +++ M S PN + Y +I LCK+ KV +A +L M
Sbjct: 173 SHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQM 231
Query: 143 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ P+ VT+ LI K+ + A L E++ + G P VVT +++ LC GR+
Sbjct: 232 VDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRI 291
Query: 199 MDAVEILEESGEQGRL-----------------GKVKGGCRFLKEMERKGCLPNVDTYNI 241
+A+ + ++ + L + + +EM GC P+V TYN
Sbjct: 292 ENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNT 351
Query: 242 LISSYCETGVLDSALDVFNDMKIDGI-SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
L+ C++G D A+++F M + + N +TY LI C R+ D +K+ + ME
Sbjct: 352 LLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEME-- 409
Query: 301 KEGSKGR-ISP----YNSVLYGLYRENQQDEALEYLKQMEKLF-PRAVDRSLKILGFCVD 354
GR + P + +V+ L +E++ DEA E + + K P +V + + G+C
Sbjct: 410 -----GRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKI 464
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
++DAK+ D+M++ G P + Y L+ +C+ R +A + EM G+ P
Sbjct: 465 TRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPP 519
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 26/295 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + +I GLG+ R + + + P++ +N+++D L K I+ A
Sbjct: 238 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 297
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y + ++ D +TY+ L+ GL L+NR ++L M G P+ V YNTL+ LC
Sbjct: 298 YDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLC 357
Query: 128 KNGKVGRARSLMSDME-----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K+G +A + M +PN +T+++LI +CK + L +A+ L ++ +PD
Sbjct: 358 KSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDA 417
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT T V++ LC R+ +A E+ E G K C P+ +N +
Sbjct: 418 VTFTTVIQKLCKESRIDEAHELFESIG--------------------KTCKPDSVLFNTM 457
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
++ YC+ +D A + + M G + TY L+ G C GR D L + M
Sbjct: 458 LAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEM 512
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 30/357 (8%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N T + L+ Y K + +A + + F PD V+ ++ G V A+ +
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
E + G + + ++NI++ C G + A +VF DM
Sbjct: 161 GEMKDSG--------------------IAVLRSHNIVLRGLCSGGKISMAWEVFKDMS-- 198
Query: 266 GI-SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
GI S N ++Y +I GLC ++D + + + M D + + Y +++ GL ++ +
Sbjct: 199 GIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVD--KAIYPDVVTYGALIDGLGKQRRV 256
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDC 381
EA + ++ P V + I G C G +E+A +D M+ E + P++ Y
Sbjct: 257 KEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSA 316
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI+ R +A EL +EM G P T+NT+L GLC+ G A+++ + G+
Sbjct: 317 LINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRK--MGV 374
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 498
G P Y+ LI C+ A L +M G+ +LPD +T+ +++ L +++
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKES 431
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 85/215 (39%), Gaps = 45/215 (20%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDI-DLA 64
PD + +I GL + N KA +L +P + +N++LD L K D A
Sbjct: 309 PDMFTYSALINGLN---LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKA 365
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+RK + + + TY +L+ C +R+GD KL M+ R + P++V + T+I
Sbjct: 366 MEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQ 425
Query: 125 SLCKNGKVGRARSLMSDMEE--------------------------------------PN 146
LCK ++ A L + + P
Sbjct: 426 KLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPT 485
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
T++ L+ +C+ +AL++ + GF P+
Sbjct: 486 LATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 225/508 (44%), Gaps = 32/508 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD V+R L A +DV + + + P++ +N++LD +KE +
Sbjct: 206 PDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASML 265
Query: 69 RKKM--MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+M G +D TY +++ L + + KL+ M+ K +S YN LI +L
Sbjct: 266 LKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYNPLITAL 324
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
+ G V + +L +ME P VT++ +I K E + A + + + G +PD+
Sbjct: 325 LERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDL 384
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKE 226
+T +L C G + +A+ +L + G RLG ++ R +E
Sbjct: 385 ITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEE 444
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +GC P+V TY IL++ + L A + F++M G+ + Y+T I C+
Sbjct: 445 MVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRI---CAELI 501
Query: 287 IDDGLKILQLMEDSK-EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+ D K QL E +G YN ++ GL + +A + +M + L P +
Sbjct: 502 LGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCIT 561
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I C G + +A++ + M+ +G P+VV Y LIH C+ + A ++M
Sbjct: 562 YTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML 621
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P T+N ++ LCR G A E + RG P Y+ LI C +G
Sbjct: 622 DVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLE---RGLAPNKYTYTLLIDGNCREG 678
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A L +M GI PDY T N+L
Sbjct: 679 NWADAIRLYFEMHQNGIPPDYCTHNALF 706
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 197/419 (47%), Gaps = 38/419 (9%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP------NDVTFSILICAYCKEENLVN 165
++P V YNTL+ S K G+ A L+ +ME NDVT++++I +E +L N
Sbjct: 239 IEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLEN 298
Query: 166 ALVLLE------KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI-LEESGEQGRL---- 214
A L++ K+ SF + P IT +LE + ++A+++ +E G L
Sbjct: 299 AAKLVDSMRLSKKASSFTYNP---LITALLER--GFVQKVEALQMEMENEGIMPTLVTYN 353
Query: 215 ---------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+V+ EM G LP++ TYN +++ YC+ G L AL + D++
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G++ +TY+TLI G C G +++ ++ + M ++G + Y ++ G ++
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEM--VEQGCFPDVCTYTILMNGSHKVRNLP 471
Query: 326 EALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A E+ +M + L P + +I + G+ A + + M+ +G P+ V Y+ +I
Sbjct: 472 MAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVII 531
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
C+ +++A +L +M G P T+ ++ C +G + A KL+ +
Sbjct: 532 DGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNG---MVSD 588
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL 502
G P Y+ LI C +G SA +M+ GI P+ +T+N L+ L + LL
Sbjct: 589 GLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLL 647
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 173/403 (42%), Gaps = 28/403 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P+L +N+I+ L+K + A +M A G+ D TY ++ G C + + L
Sbjct: 347 PTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWL 406
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
L ++ G+ P + YNTLI C+ G + AR L +M E P+ T++IL+ K
Sbjct: 407 LGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHK 466
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
NL A ++ S G PD C E++ LG
Sbjct: 467 VRNLPMAREFFDEMLSKGLQPD-----------CFAYNTRICAELI--------LGDTHK 507
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
+ + M KG P+ TYN++I C+TG L A D+ M DG+ + +TY LI
Sbjct: 508 AFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIH 567
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
C G + + K+L M +G + + Y +++ R A + ++M +
Sbjct: 568 AHCERGLLSEARKLLNGM--VSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGI 625
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P + ++ I C G A F +M+E G PN Y LI C+E +A
Sbjct: 626 EPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIR 685
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L EM +G P T N + G +G++ A++ +E + G
Sbjct: 686 LYFEMHQNGIPPDYCTHNALFKGF-DKGHMYHAIEYLENIVLG 727
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 6/263 (2%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G P+V N ++ + D V+ +M I VTY+TL+ GR D+
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK--I 348
+L+ ME G YN V+ L RE + A + + M +L +A + I
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLI 321
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G V+ + +M EG +P +V Y+ +IH + E+V A EM G L
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P T+N++L+G C+ GN+ AL L+ + R G P Y+ LI C GG + A
Sbjct: 382 PDLITYNSMLNGYCKAGNLKEALWLLGDLRRA---GLAPTVLTYNTLIDGYCRLGGLEEA 438
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
L +MV +G PD T+ L+
Sbjct: 439 RRLKEEMVEQGCFPDVCTYTILM 461
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 215/452 (47%), Gaps = 33/452 (7%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFN--MTPSLKIFNSILDVLVKEDIDLARAFY 68
E+ + V+ GL A M N +A +LV + TP+L I+N I+ L + +
Sbjct: 54 ETTYKLVVDGLCGAGMAN---QALELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKV 110
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM+ + + +TY IL+ GLC +N+ ++ MK G KPN + Y TLI L +
Sbjct: 111 LEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSR 170
Query: 129 NGKVGRARSLMSD---MEEPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A +M + +E P DV T + ++ CK L +AL +E+ G P+ VT
Sbjct: 171 AGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVT 230
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFLKEM 227
+ ++ G + + EE + + G + + ++E+
Sbjct: 231 YSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL 290
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G +P+V TY++LI+++ G D++L++ DM+ +G+ + VTY TLI LC +
Sbjct: 291 RQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKF 350
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D ++L+LME + GS + YNSV+ GL + + DE + M + P V S
Sbjct: 351 QDAFRLLELMEAA--GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYS 408
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK--EMT 403
+ + G G ++ A + F+ + P+ Y +I + C+ ++ EA + E+T
Sbjct: 409 IIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVT 468
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
G I +++ LC +A ++VE
Sbjct: 469 VAGD-NICRALAGLVAALCDAERTDSARRIVE 499
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 203/446 (45%), Gaps = 42/446 (9%)
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+A + ++ +GV+ D + +L L ++ + +L ++ SRGV Y +
Sbjct: 1 MAAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLV 60
Query: 123 IHSLCKNGKVGRARSLMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ LC G +A L+ ++ P ++ +I C+ +++A +LEK V
Sbjct: 61 VDGLCGAGMANQALELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+V T T +L LC R K K +EM+R GC PN TY
Sbjct: 121 PNVFTYTILLNGLC-------------------RSNKTKLAREVFQEMKRNGCKPNPITY 161
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
LI G +D AL V + + + + +T T++ GLC R+DD LK ++ M
Sbjct: 162 GTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR- 220
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME---------KLFPRAVDRSLKILG 350
+ G + Y+++++G + + D + + ++ + +P +D
Sbjct: 221 -QMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLD------A 273
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G ++ A++ +++ + G VP+VV Y LI+ + + + + EL+++M +G P
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T++T+++ LC++ A +L+E M GS P Y+ ++ LC+ G
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLEL-MEAA--GSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQ 496
+ M+ PD +T++ ++ LS+
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSK 416
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 24/306 (7%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DI 61
S++ P D T++ GL +A ++D +K + + + + P+ +++++ + ++
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL 244
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D F+ ++ G + Y + LC + K + ++ GV P+ V Y+
Sbjct: 245 DRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSM 304
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI++ + G+ + L+ DM +P+ VT+S LI CKE +A LLE + G
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P+VVT V++ LC G+ MD V R + M + C P+V
Sbjct: 365 SPPNVVTYNSVMDGLCKSGK-MDEVH------------------RVYEMMLKSRCSPDVV 405
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+I+++ + G+LDSA+ +F +K + Y +I LC G++++ + M
Sbjct: 406 TYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM 465
Query: 298 EDSKEG 303
E + G
Sbjct: 466 EVTVAG 471
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 204/435 (46%), Gaps = 38/435 (8%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMAS 75
++ L R ++ V + VS P+L + ++D L K ++ A + ++M+
Sbjct: 169 ILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVF-EEMIRK 227
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G + D Y+ L+ GL RV + KL+ +M +RG P +V Y +++ LCK G++ A
Sbjct: 228 GYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEA 287
Query: 136 RSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ +M T+S ++ Y + A ++E+ PD ++ T +E
Sbjct: 288 VKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEA 347
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
L S+GR +A ++ E M KGC P++ TY I+I ++C+ G
Sbjct: 348 LYSIGRREEAEKVFET-------------------MVEKGCKPDMHTYGIIIDNFCKEGS 388
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ +A V M + N Y ++ G R+++ L++ Q + K+G Y
Sbjct: 389 MAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRI--LKDGILPSTVTY 446
Query: 312 NSVLYGLYRENQQDEALEYLKQM----EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD-- 365
N+V+ L + + DEALE L++M E+L P V S+ I G G V +R FD
Sbjct: 447 NTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGL---GKVGMEERAFDLL 503
Query: 366 -QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+MI+ G +P+ Y LI +V A EL++EM G P T+ T++ LCR
Sbjct: 504 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR- 562
Query: 425 GNVGTALKLVEEDMR 439
+V A L++E MR
Sbjct: 563 SDVDAAWDLLQEMMR 577
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/499 (24%), Positives = 234/499 (46%), Gaps = 34/499 (6%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTN 95
+R + +L NS+L LV+ + A F++ + V ++ IL++G +
Sbjct: 87 ATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISEPNVS----SFNILLRGFAARD 142
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFS 151
LL MKSRG+ N + ++ +LC + +A S + + EP T++
Sbjct: 143 DFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYT 202
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+L+ CK + A + E+ G+ PD++ + +++ L GRV +A ++++ +
Sbjct: 203 VLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVAR 262
Query: 212 G----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G + G+++ + ++EM R+ P VDTY+ +++ Y G ++ A
Sbjct: 263 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKA 322
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
V +M + + ++Y I L S GR ++ K+ + M ++G K + Y ++
Sbjct: 323 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETM--VEKGCKPDMHTYGIII 380
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E A L+ M+K + P ++ + GF +E+A + +++++G +
Sbjct: 381 DNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGIL 440
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMT--GHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P+ V Y+ +I+A C+ +++ EA EL++EM P T++ ++ GL + G A
Sbjct: 441 PSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAF 500
Query: 432 KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
L+ E I G +P Y+ LI+ L G A LL +M+ GI PD T+ +L+
Sbjct: 501 DLLAE---MIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLV 557
Query: 492 ICLSQQTTWLLLLLLNEMV 510
L + LL EM+
Sbjct: 558 QILCRSDVDAAWDLLQEMM 576
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 29/276 (10%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
++FI + +GR + K + + P + + I+D KE A +
Sbjct: 342 TMFIEALYSIGRR---EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRL 398
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M + V+ + Y Y ++M G ++R+ + +L + G+ P++V YNT+I++LCK K
Sbjct: 399 MDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKK 458
Query: 132 VGRARSLMSDME------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ A L+ +M+ EP+ VT+S++I K A LL + G +PD T
Sbjct: 459 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 518
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ L G+V A+E+LE EM + G P+ TY L+
Sbjct: 519 TSLIQTLAGAGKVSRAMELLE-------------------EMLKAGIFPDDHTYGTLVQI 559
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
C + V D+A D+ +M +G + N T+ + +G
Sbjct: 560 LCRSDV-DAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 171/419 (40%), Gaps = 61/419 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I GL +A +++ K DL+ P+ + SI+ L K
Sbjct: 231 PDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKT 290
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++M ++ TY+ ++ G +V F ++ M R P+++ Y I +L
Sbjct: 291 IQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYS 350
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ A + M E P+ T+ I+I +CKE ++ A +L P+
Sbjct: 351 IGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYI 410
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
T +++ R+ +A+E+ + R LK+ G LP+ TYN +I+
Sbjct: 411 YTMIMDGFVKSSRLEEALELYQ---------------RILKD----GILPSTVTYNTVIN 451
Query: 245 SYCETGVLDSALDVFNDM--KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ C+ +D AL++ +M + + + + VTY +I GL G + +L M D+
Sbjct: 452 ALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDN-- 509
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKR 362
G Y S++ L + A+E L+
Sbjct: 510 GVIPDCFTYTSLIQTLAGAGKVSRAMELLE------------------------------ 539
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+M++ G P+ Y L+ C+ + V A +L++EM +G+ P TF V G
Sbjct: 540 ---EMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEKGF 594
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 194/436 (44%), Gaps = 31/436 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M +GV + + L+ C +V + LL M G ++ ++ SLC+ G+
Sbjct: 64 MTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGR 123
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
M E PN V ++ I CK + A +LE+ G P+V T T
Sbjct: 124 FKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTT 183
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+++ LC +G A + FLK ++ PNV TY ++I YC
Sbjct: 184 LIDGLCKIGWTERAFRL------------------FLKLIKSSSYKPNVHTYTVMIGGYC 225
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G L A + M G+ N TY TLI G C GG D +++ M+ +EG
Sbjct: 226 REGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMK--QEGFLPN 283
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
I YN+V+ G ++ + EA + L+ + L + ++ I C G++ A FD
Sbjct: 284 IYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFD 343
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+E G P++ Y LI YCQ+ ++ E+ + + G LP T+ ++++G C+ G
Sbjct: 344 RMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVG 403
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
AL++ E R + G S Y LI LC++ + A L M+ K ++P +
Sbjct: 404 RSTLALRVFE---RMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEV 460
Query: 486 TWNSLLI--CLSQQTT 499
T +L C ++T+
Sbjct: 461 TRVTLTFEYCRREKTS 476
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 203/467 (43%), Gaps = 41/467 (8%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+R+ M+ +G + Y + GLC V F +L M RG+KPN + TLI L
Sbjct: 130 FFRR-MLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 127 CKNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK G RA L S +PN T++++I YC+E L A +LL + G P+
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
T T ++ C G A E+ + +M+++G LPN+ TYN
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFEL-------------------MNKMKQEGFLPNIYTYNA 289
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+I +C+ G + A V G+ ++ +TY LI C G I L + M ++
Sbjct: 290 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVEN- 348
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRSLKILGFCVDGNVED 359
G I Y S++ ++ Q +E+ ++ + M L P + I G+C G
Sbjct: 349 -GCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTL 407
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A R F++M++ G + + Y LI C+E R+ EA L + M +P T T+
Sbjct: 408 ALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTF 467
Query: 420 GLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
CR+ A+ +++ D R +++ L G +AS+ L +++ +
Sbjct: 468 EYCRREKTSIAVSVLDRLDKR-------QQVHTVDVVVRKLSALGDVDAASLFLKKVLDE 520
Query: 479 GILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKR 525
D+ T+ + + + L ++E S + S KEKR
Sbjct: 521 DYAVDHATYTGFINSCYENNRYALASEMSEKFSKKIS----SFKEKR 563
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 188/428 (43%), Gaps = 34/428 (7%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
+PP+ + I GL + R + + + + P++ +++D L K RA
Sbjct: 139 TPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT-ERA 197
Query: 67 F--YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
F + K + +S + + +TY +++ G C ++ LL M +G+KPN+ Y TLI
Sbjct: 198 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 257
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G RA LM+ M++ PN T++ +I +CK+ + A +L + S G
Sbjct: 258 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 317
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D +T T ++ C G + A+++ + M GC P+++ Y
Sbjct: 318 DKITYTILITEHCKQGHITYALDLFD-------------------RMVENGCCPDIEAYT 358
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LIS+YC+ ++ + F+ + G+ TY ++I G C GR L++ + M
Sbjct: 359 SLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERM--V 416
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVE 358
+ G Y +++ GL +E++ +EA + M ++L P V R +C
Sbjct: 417 QNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFEYCRREKTS 476
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A D++ + V V D ++ V AS +K++ Y +T+ +
Sbjct: 477 IAVSVLDRLDKRQQVHTV---DVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFI 533
Query: 419 SGLCRQGN 426
+ C + N
Sbjct: 534 NS-CYENN 540
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 137/337 (40%), Gaps = 48/337 (14%)
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
GE GRL + + EM G V+T N ++ ETG A VF+ M G+S
Sbjct: 14 GEAGRLPEAAD---MVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVS 70
Query: 269 -----------------------------WNF------VTYDTLIRGLCSGGRIDDGLKI 293
W + T ++R LC GR D +
Sbjct: 71 PMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEF 130
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGF 351
+ M ++ G+ + Y + + GL + +A L++M L P + I G
Sbjct: 131 FRRMLET--GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 352 CVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G E A R F ++I+ PNV Y +I YC+E ++ A L+ M G P
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+T+ T++ G C+ G+ A +L+ + + G LP Y+ +I C+KG Q A
Sbjct: 249 TNTYTTLIGGHCKGGSFDRAFELMNKMKQ---EGFLPNIYTYNAVIDGFCKKGKIQEAYK 305
Query: 471 LLVQMVGKGILPDYLTWNSLLI--CLSQQTTWLLLLL 505
+L +G+ D +T+ L+ C T+ L L
Sbjct: 306 VLRMATSQGLKFDKITYTILITEHCKQGHITYALDLF 342
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 218/488 (44%), Gaps = 79/488 (16%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + GV D +++ L R D + M G++P+ V YNTL+ S K
Sbjct: 1073 REMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKE 1132
Query: 130 GKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLE------KSFSFG 177
G+ + L+ +ME PNDVT++++I ++ +L A L+E K+ SF
Sbjct: 1133 GRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFT 1192
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-------------GKVKGGCRFL 224
+ P IT +L C V +V D +E G + G V+
Sbjct: 1193 YNP---LITGLLARGC-VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM G LP+V TYN L++ YC+ G L AL +F D++ G++ +TY+ LI G C
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---------- 334
G +++ +IL+ E ++G + Y ++ G A E+ +M
Sbjct: 1309 GDLEEA-RILK-EEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCF 1366
Query: 335 ---------------------------EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
E + V ++ I G C GN++DAK +M
Sbjct: 1367 AYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKM 1426
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ G P+ + Y CLIHA+C+ +REA ++ M G LP A TF ++ CR+GN+
Sbjct: 1427 VSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNL 1486
Query: 428 GTAL----KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+A K++EE G P Y+ LI ALC G Q AS +M+ +G++ +
Sbjct: 1487 YSAYGWFRKMLEE-------GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVAN 1539
Query: 484 YLTWNSLL 491
T+ L+
Sbjct: 1540 KYTYTLLI 1547
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 134/486 (27%), Positives = 212/486 (43%), Gaps = 60/486 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD V+R L A +D+ + + + PS+ +N++LD +KE A
Sbjct: 1082 PDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAML 1141
Query: 69 RKKM--MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK------------------ 108
K+M SG +D TY +++ GL + + +L+ M+
Sbjct: 1142 LKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYNPLITGLL 1201
Query: 109 ----------------SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
+ G+ P V YN +IH L ++G V A+ ++M P+ +
Sbjct: 1202 ARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVI 1261
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
T++ L+ YCK NL AL+L G P V+T +++ C +G + +A + EE
Sbjct: 1262 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321
Query: 209 GEQGRLGKV-------KGGC---------RFLKEMERKGCLPNVDTYNILISSYCETGVL 252
GEQG L V KG F EM KG P+ YN I + G +
Sbjct: 1322 GEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDI 1381
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A ++ + ++GIS + VTY+ LI GLC G + D K LQ M+ G + Y
Sbjct: 1382 ARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDA-KELQ-MKMVSNGLQPDCITYT 1439
Query: 313 SVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
+++ EA + M + L P AV ++ I +C GN+ A F +M+EE
Sbjct: 1440 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 1499
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G PN + Y+ LIHA C+ R + AS EM G + T+ ++ G C+ GN A
Sbjct: 1500 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 1559
Query: 431 LKLVEE 436
++ E
Sbjct: 1560 MRFYFE 1565
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 24/225 (10%)
Query: 62 DLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
D+ARAF R+ +M G+ D TY IL+ GLC T + D +L M S G++P+ + Y
Sbjct: 1380 DIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYT 1439
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LIH+ C+ G + AR + ++M P+ VTF+++I AYC+ NL +A K
Sbjct: 1440 CLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 1499
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G P+ +T ++ LC R+G+ + EM +G + N
Sbjct: 1500 GVEPNEITYNVLIHALC-------------------RMGRTQLASHHFHEMLERGLVANK 1540
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
TY +LI C+ G + A+ + +M +GI +++T+ L++G
Sbjct: 1541 YTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 157/365 (43%), Gaps = 24/365 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P++ +N+++ L++ + A +M A G+ D TY L+ G C + + L
Sbjct: 1223 PTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLL 1282
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
++ G+ P + YN LI C+ G + AR L +M E PN T++IL+
Sbjct: 1283 FGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLN 1342
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTI-TKVLE--LLCSVGRVMDAVEILEESGEQG---- 212
+L A ++ S G PD T++ +L + R + E+L G
Sbjct: 1343 VRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVT 1402
Query: 213 ---------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+ G +K +M G P+ TY LI ++CE G+L A +FN+M
Sbjct: 1403 YNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 1462
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
DG+ + VT+ +I C G + + M + EG + YN +++ L R +
Sbjct: 1463 SDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE--EGVEPNEITYNVLIHALCRMGR 1520
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
A + +M L +L I G C GN EDA R + +M + G P+ + +
Sbjct: 1521 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 1580
Query: 382 LIHAY 386
L+ +
Sbjct: 1581 LLKGF 1585
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT--GHGYLPIASTFNTVLSGLC 422
++M+E G P++V Y+ L+ ++ +E R + + L+KEM G G LP T+N V++GL
Sbjct: 1108 EEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLT 1167
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
R+G++ A +LVE G+ S Y+PLI L +G + L ++M +GI+P
Sbjct: 1168 RKGDLEEAAELVE----GMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMP 1223
Query: 483 DYLTWNSLLICLSQ 496
+T+N+++ L Q
Sbjct: 1224 TVVTYNAMIHGLLQ 1237
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ PS F I+ + +L A+ + +KM+ GV+ ++ TY +L+ LC R
Sbjct: 1466 LLPSAVTFTVIIHAYCRRG-NLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 1524
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
H M RG+ N Y LI CK G A +M + P+ +T L+
Sbjct: 1525 SHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKG 1584
Query: 157 Y 157
+
Sbjct: 1585 F 1585
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
F +M G P+V + ++ R + + +EM G P T+NT+L +
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+G L++E M G G LP Y+ +I L KG + A+ L+ M
Sbjct: 1132 EGRKDKVAMLLKE-METRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM 1182
>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 580
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 190/399 (47%), Gaps = 35/399 (8%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
L+ LC NR+ +++ +M S G+ P++ Y L++ LCK G VG A L+ ME+
Sbjct: 115 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 174
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
N VT++ L+ C +L +L +E+ G P+ T + +LE
Sbjct: 175 FPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLE------------ 222
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+G VK L E+ KG PN+ +YN+L++ +C+ G D A+ +F ++
Sbjct: 223 ---AAYKERGTDQAVK----LLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFREL 275
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ G N V+Y+ L+R LC GR D+ +L M+ + YN ++ L
Sbjct: 276 PVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEMDGGDRAPS--VVTYNILINSLAFHG 333
Query: 323 QQDEALEYLKQMEK-----LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ ++A++ LK+M K A + I C +G V+ +C D+MI PN
Sbjct: 334 RTEQAMQVLKEMSKGHHHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEG 393
Query: 378 IYDCLIHAYCQEE-RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
Y I A C+ +V+EA +++ ++ + +V++ +CR+GN A +L+ E
Sbjct: 394 TYSA-IGALCEHNGKVQEAFYIIQSLSNKQKCCTHDFYKSVITSMCRKGNTFAAFQLLYE 452
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
R G P + YS LI+ LC +G F A +L M
Sbjct: 453 MTRC---GFDPDAHTYSALIRGLCLEGMFIGAMEVLSIM 488
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 23/333 (6%)
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
E +L + LE + G P+V T++L LC R+ A+ ++E
Sbjct: 87 EPSLSDTFSHLECLVTDGHKPNVAHSTQLLYDLCKANRLKKAIRVIEL------------ 134
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
M G +P+ Y L++ C+ G + A+ + M+ G N VTY+ L+R
Sbjct: 135 -------MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALVR 187
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKL 337
GLC G ++ L+ ++ + + G Y+ +L Y+E D+A++ L ++ +
Sbjct: 188 GLCMLGSLNQSLQFVERL--MQRGLAPNAFTYSFLLEAAYKERGTDQAVKLLDEIIAKGG 245
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
P V ++ + GFC +G +DA + F ++ +G NVV Y+ L+ C + R EA+
Sbjct: 246 QPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCDGRWDEANS 305
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L+ EM G P T+N +++ L G A+++++E +G + Y+P+I
Sbjct: 306 LLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRVTATSYNPVIA 365
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
LC++G L +M+ + P+ T++++
Sbjct: 366 RLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAI 398
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 173/385 (44%), Gaps = 26/385 (6%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + + ++RGL +N ++ + + + + P+ ++ +L+ KE
Sbjct: 176 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLEAAYKERGTDQAVK 235
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++A G Q + +Y +L+ G C R D KL + +G K N V YN L+ LC
Sbjct: 236 LLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLC 295
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICA---YCKEENLVNALVLLEKSFSFGFVP 180
+G+ A SL+++M+ P+ VT++ILI + + + E + L + K F
Sbjct: 296 CDGRWDEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMSKGHHHQFRV 355
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE------SGEQGRL----------GKVKGGCRFL 224
+ V+ LC G+V V+ L+E +G GKV+ +
Sbjct: 356 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAIGALCEHNGKVQEAFYII 415
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ + K D Y +I+S C G +A + +M G + TY LIRGLC
Sbjct: 416 QSLSNKQKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 475
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G +++L +ME+S E K + +N+++ GL + + D ALE + M +K P
Sbjct: 476 GMFIGAMEVLSIMEES-EYHKPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMPNET 534
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQM 367
++ + G + +E AK +++
Sbjct: 535 TYAIIVEGIAHEDELELAKEVLEEL 559
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 180/442 (40%), Gaps = 68/442 (15%)
Query: 62 DLARAFYRKK-------MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
DL +A KK M++SG+ D Y L+ LC VG +L+ M+ G
Sbjct: 118 DLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGFPS 177
Query: 115 NSVIYNTLIHSLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLL 170
N+V YN L+ LC G + ++ LM PN T+S L+ A KE A+ LL
Sbjct: 178 NTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLEAAYKERGTDQAVKLL 237
Query: 171 EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL---------------- 214
++ + G P++V+ +L C GR DA+++ E +G
Sbjct: 238 DEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKGFKANVVSYNILLRCLCCD 297
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF--- 271
G+ L EM+ P+V TYNILI+S G + A+ V +M G F
Sbjct: 298 GRWDEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQAMQVLKEMS-KGHHHQFRVT 356
Query: 272 -VTYDTLIRGLCSGGRIDDGLKILQLME----DSKEGSKGRISP---------------- 310
+Y+ +I LC G++D +K L M EG+ I
Sbjct: 357 ATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAIGALCEHNGKVQEAFYIIQ 416
Query: 311 -------------YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
Y SV+ + R+ A + L +M + P A S I G C++G
Sbjct: 417 SLSNKQKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 476
Query: 356 NVEDAKRCFDQMIE-EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
A M E E P V ++ +I C+ R A E+ + M G +P +T+
Sbjct: 477 MFIGAMEVLSIMEESEYHKPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMPNETTY 536
Query: 415 NTVLSGLCRQGNVGTALKLVEE 436
++ G+ + + A +++EE
Sbjct: 537 AIIVEGIAHEDELELAKEVLEE 558
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 22/250 (8%)
Query: 257 DVFNDMK---IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
D F+ ++ DG N L+ LC R+ +++++LM S G S Y
Sbjct: 92 DTFSHLECLVTDGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSS--GIIPDASAYTY 149
Query: 314 VLYGLYRENQQDEALEYLKQMEKL-FP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ L + A++ +++ME FP V + + G C+ G++ + + +++++ G
Sbjct: 150 LVNQLCKRGNVGYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRG 209
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
PN Y L+ A +E +A +L+ E+ G P ++N +L+G C++G A+
Sbjct: 210 LAPNAFTYSFLLEAAYKERGTDQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAM 269
Query: 432 KLVEEDMRGIGRGSLPGSG------HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
KL E LP G Y+ L++ LC G + A+ LL +M G P +
Sbjct: 270 KLFRE---------LPVKGFKANVVSYNILLRCLCCDGRWDEANSLLAEMDGGDRAPSVV 320
Query: 486 TWNSLLICLS 495
T+N L+ L+
Sbjct: 321 TYNILINSLA 330
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G K ++ +LY L + N+ +A+ ++ M + P A + + C GNV
Sbjct: 103 DGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGY 162
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + ++M + G N V Y+ L+ C + ++ + ++ + G P A T++ +L
Sbjct: 163 AMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYSFLLE 222
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
++ A+KL++E I +G P Y+ L+ C++G A L ++ KG
Sbjct: 223 AAYKERGTDQAVKLLDEI---IAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVKG 279
Query: 480 ILPDYLTWNSLLICLSQQTTW 500
+ +++N LL CL W
Sbjct: 280 FKANVVSYNILLRCLCCDGRW 300
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK-NGKVGRARSLMSD 141
+Y ++ LC +V K L M R KPN Y+ I +LC+ NGKV A ++
Sbjct: 359 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSA-IGALCEHNGKVQEAFYIIQS 417
Query: 142 MEEPNDVT----FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
+ + +I + C++ N A LL + GF PD T + ++ LC G
Sbjct: 418 LSNKQKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 477
Query: 198 VMDAVEIL---EESGEQGRL-----GKVKGGCRFLKE---------MERKGCLPNVDTYN 240
+ A+E+L EES + G C+ + M K +PN TY
Sbjct: 478 FIGAMEVLSIMEESEYHKPTVDNFNAMILGLCKIRRTDLALEVFEMMVGKKRMPNETTYA 537
Query: 241 ILISSYCETGVLDSALDVFNDMK 263
I++ L+ A +V +++
Sbjct: 538 IIVEGIAHEDELELAKEVLEELR 560
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 192/423 (45%), Gaps = 45/423 (10%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M SG++ YT+ L+ GL + + ++ VM+ + P+ V YNT+I CK
Sbjct: 214 RRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKA 273
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G +A +DME EP+ +T+ LI A E N + L L ++ G
Sbjct: 274 GNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAY 333
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ V+ LC GR ++ + E M +KGC NV Y LI +
Sbjct: 334 SLVIGGLCKDGRTVEGSSVFE-------------------NMNKKGCKANVAIYTALIDA 374
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
Y + G ++ A+++F MK +G + VTY ++ GLC GR+D+ ++ + +D++
Sbjct: 375 YGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVN 434
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD---------GN 356
Y+S++ GL + + DEA EK F V+R +C + G
Sbjct: 435 AMF--YSSLIDGLGKAGRVDEA-------EKFFEEMVERGCPQDSYCYNALIDALAKSGK 485
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+E+A F +M +EG V Y LI +E R EA +L M G P ++F
Sbjct: 486 MEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRA 545
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+ GLC G V A K+++E G +P + + +I LC+ G + A L +V
Sbjct: 546 LSVGLCLSGKVARACKILDELA---PMGVIPETA-FEDMINVLCKAGRTEQACKLADGIV 601
Query: 477 GKG 479
+G
Sbjct: 602 DRG 604
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 197/484 (40%), Gaps = 96/484 (19%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMA 74
++IR G M+ +++ + + PSL FN +L+ LV I+ A + ++M
Sbjct: 195 SLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVF--EVME 252
Query: 75 SGVQGDD-YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS-------- 125
G G D +Y ++KG C + M+ R ++P+ + Y TLI +
Sbjct: 253 CGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFD 312
Query: 126 ---------------------------LCKNGKVGRARSLMSDME----EPNDVTFSILI 154
LCK+G+ S+ +M + N ++ LI
Sbjct: 313 SCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALI 372
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ--- 211
AY K N+ A+ L E+ GF PD VT ++ LC GR+ +AVE E +
Sbjct: 373 DAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVA 432
Query: 212 -------------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
G+ G+V +F +EM +GC + YN LI + ++G ++ AL +
Sbjct: 433 VNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVL 492
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
F M+ +G TY LI GL R ++ LK+ LM D KG I+P +
Sbjct: 493 FKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMID-----KG-ITPTTASF--- 543
Query: 319 YRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
R+L + G C+ G V A + D++ G +P
Sbjct: 544 -------------------------RALSV-GLCLSGKVARACKILDELAPMGVIPETAF 577
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM 438
D +I+ C+ R +A +L + G +++ L + GN A+KL+ +
Sbjct: 578 ED-MINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKI 636
Query: 439 RGIG 442
GIG
Sbjct: 637 -GIG 639
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 17/292 (5%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G LG V+ + M+ G P++ T+N L++ + ++SA VF M+ I +
Sbjct: 201 GALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDV 260
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
V+Y+T+I+G C G ++ ME + +I+ Y +++ Y E D L
Sbjct: 261 VSYNTMIKGYCKAGNTKKAMEKFTDME-KRNLEPDKIT-YLTLIQACYSEGNFDSCLHLY 318
Query: 332 KQMEK----LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++ME+ + P A SL I G C DG + F+ M ++G NV IY LI AY
Sbjct: 319 QEMEERGLEIPPHAY--SLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYG 376
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE---EDMRGIGRG 444
+ V EA L + M G G+ P T+ +++GLC+ G + A++ E ++ +
Sbjct: 377 KNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAV--- 433
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ YS LI L + G A +MV +G D +N+L+ L++
Sbjct: 434 ---NAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAK 482
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 359 DAKRC-FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
D RC F + E+G + V + LI ++ V E + + M G P TFN +
Sbjct: 172 DRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFL 231
Query: 418 LSGLCRQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
L+GL + +A ++ E G IG P Y+ +IK C+ G + A M
Sbjct: 232 LNGLVNSMFIESAERVFEVMECGKIG----PDVVSYNTMIKGYCKAGNTKKAMEKFTDME 287
Query: 477 GKGILPDYLTWNSLL-ICLSQQTTWLLLLLLNEM 509
+ + PD +T+ +L+ C S+ L L EM
Sbjct: 288 KRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEM 321
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 5/134 (3%)
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I F G VE+ + +M E G P++ ++ L++ + A + + M
Sbjct: 197 IRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKI 256
Query: 408 LPIASTFNTVLSGLCRQGNVGTAL-KLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P ++NT++ G C+ GN A+ K + + R + P Y LI+A +G F
Sbjct: 257 GPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLE----PDKITYLTLIQACYSEGNFD 312
Query: 467 SASMLLVQMVGKGI 480
S L +M +G+
Sbjct: 313 SCLHLYQEMEERGL 326
>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
Acinetobacter calcoaceticus [Arabidopsis thaliana]
Length = 566
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 216/449 (48%), Gaps = 36/449 (8%)
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAI-LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
++ +L+ +F + + +G + ++ L+ LC NR+ +++ +M S G+ P++
Sbjct: 73 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDAS 132
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
Y L++ LCK G VG A L+ ME+ N VT++ L+ C +L +L +E+
Sbjct: 133 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 192
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G P+ T + +LE +AV++L+E VKGG
Sbjct: 193 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI-------IVKGG------------E 233
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN+ +YN+L++ +C+ G D A+ +F ++ G N V+Y+ L+R LC GR ++ +
Sbjct: 234 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 293
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----LFPRAVDRSLKIL 349
L M+ + YN ++ L + ++AL+ LK+M K A + I
Sbjct: 294 LAEMDGGDRAPS--VVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIA 351
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE-RVREASELMKEMTGHGYL 408
C +G V+ +C D+MI PN Y+ I + C+ +V+EA +++ ++
Sbjct: 352 RLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKC 410
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ +V++ LCR+GN A +L+ E R G P + YS LI+ LC +G F A
Sbjct: 411 CTHDFYKSVITSLCRKGNTFAAFQLLYEMTRC---GFDPDAHTYSALIRGLCLEGMFTGA 467
Query: 469 -SMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+L + + P +N++++ L +
Sbjct: 468 MEVLSIMEESENCKPTVDNFNAMILGLCK 496
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 172/385 (44%), Gaps = 27/385 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + + ++RGL +N ++ + + + + P+ ++ +L+ KE
Sbjct: 163 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 222
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++ G + + +Y +L+ G C R D L + ++G K N V YN L+ LC
Sbjct: 223 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 282
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG---FVP 180
+G+ A SL+++M+ P+ VT++ILI + AL +L K S G F
Sbjct: 283 CDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL-KEMSKGNHQFRV 341
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE---------SGEQGRLG-------KVKGGCRFL 224
+ V+ LC G+V V+ L+E G +G KV+ +
Sbjct: 342 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYII 401
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ + K D Y +I+S C G +A + +M G + TY LIRGLC
Sbjct: 402 QSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 461
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G +++L +ME+S E K + +N+++ GL + + D A+E + M +K P
Sbjct: 462 GMFTGAMEVLSIMEES-ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNET 520
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQM 367
++ + G + +E AK D++
Sbjct: 521 TYAILVEGIAHEDELELAKEVLDEL 545
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 51/286 (17%)
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
G PNV L+ C+ L A+ V M GI + Y L+ LC G +
Sbjct: 91 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 150
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILG 350
+++++ MED P N+V Y + G
Sbjct: 151 MQLVEKMEDHG-------YPSNTVTYNAL----------------------------VRG 175
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C+ G++ + + ++++++G PN Y L+ A +E EA +L+ E+ G P
Sbjct: 176 LCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPN 235
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG------HYSPLIKALCEKGG 464
++N +L+G C++G A+ L E LP G Y+ L++ LC G
Sbjct: 236 LVSYNVLLTGFCKEGRTDDAMALFRE---------LPAKGFKANVVSYNILLRCLCCDGR 286
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLS-QQTTWLLLLLLNEM 509
++ A+ LL +M G P +T+N L+ L+ T L +L EM
Sbjct: 287 WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 332
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 126/350 (36%), Gaps = 95/350 (27%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + ++ + R ++ VK D + P+L +N +L KE D A A
Sbjct: 199 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 258
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL- 126
+R+ + A G + + +Y IL++ LC R + LL M P+ V YN LI+SL
Sbjct: 259 FRE-LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 317
Query: 127 ------------------------------------CKNGKVGRARSLMSDME----EPN 146
CK GKV + +M +PN
Sbjct: 318 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 377
Query: 147 DVTFSIL-----------------------------------ICAYCKEENLVNALVLLE 171
+ T++ + I + C++ N A LL
Sbjct: 378 EGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLY 437
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE--ESGEQGRL------GKVKGGCRF 223
+ GF PD T + ++ LC G A+E+L E E + + G C+
Sbjct: 438 EMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKI 497
Query: 224 LKE---------MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ M K +PN TY IL+ L+ A +V +++++
Sbjct: 498 RRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRL 547
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/528 (24%), Positives = 233/528 (44%), Gaps = 70/528 (13%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
F ++R A + D + D + + +L+ N +L+ LV+ DI A A + ++M
Sbjct: 97 FDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF-QQM 155
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVG-------------------------DGF------ 101
+G DD+T AI+ K C RV DG+
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215
Query: 102 ----KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP-----NDVTFSI 152
KLLH ++ +G+ PN V Y L+ CK G++ A ++ +++E ++V +
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LI YC+ + +A + ++ G ++ ++ C + G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKL----------------G 319
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R+G+V+ + L+ E +G + +YN L+ YC G + A + + M +G + +
Sbjct: 320 RMGEVE---KLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTL 376
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY+TL+ G CS G IDD LK+ LM K G +++L G ++ + ++AL K
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLM--LKRGVVPNEISCSTLLDGFFKAGKTEQALNLWK 434
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+ L V + I G C + + +A+ F +M E + + Y LI YC+
Sbjct: 435 ETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLG 494
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL-VEEDMRGIGRGSLPGS 449
+ A+++ EM G++P FN+ ++GL G + VE +G+ P +
Sbjct: 495 DLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLS----PNT 550
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y LI C++G A +L +MV KG+ P+ + L+ C ++
Sbjct: 551 VTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYRE 598
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 235/569 (41%), Gaps = 96/569 (16%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE + +I G + + D + D + + ++ ++N++++ K L R
Sbjct: 269 DEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCK----LGRMGEV 324
Query: 70 KKMMAS----GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+K++ + GV D+Y+Y L+ G C + F+ +M G ++ YNTL++
Sbjct: 325 EKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNG 384
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C G + A L M + PN+++ S L+ + K AL L +++ + G +
Sbjct: 385 FCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARN 444
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
VVTI V+ LC R+ +A E+ E +LG + +
Sbjct: 445 VVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRI 504
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EME G +P+V+ +N I+ D+ +M G+S N VTY LI G C G
Sbjct: 505 EMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEG 564
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----------- 334
+ D + E ++G K + + ++ YRE + DEA L+++
Sbjct: 565 NLHDA--CILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSA 622
Query: 335 ------------EKLF-----PRAVDRSLKILGFCVDGNVEDAKRCF------------- 364
E L + ++ ILG C G V DA+ F
Sbjct: 623 STLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNF 682
Query: 365 ----------------------DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
D+M+ PN+V Y+ LI+ C+ V A L ++
Sbjct: 683 TYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKL 742
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G P A T+NT++ G C+ GN A KL + + I G P Y+ LI LC +
Sbjct: 743 QSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQ---KMIKEGIQPTVFTYTILIHGLCTQ 799
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + A LL QM+ + P+++T+ +L+
Sbjct: 800 GYMEEAIKLLDQMIENNVDPNFITYWTLI 828
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 125/522 (23%), Positives = 212/522 (40%), Gaps = 90/522 (17%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMM 73
+ T++ G I+D +K L+ + + P+ +++LD K K+ +
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A G+ + T ++ GLC R+ + +L H MK +S+ Y TLI CK G +G
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497
Query: 134 RARSLMSDMEE---------------------------------------PNDVTFSILI 154
RA + +ME PN VT+ LI
Sbjct: 498 RATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALI 557
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE------- 207
+CKE NL +A +L + G P++ + ++ G+V +A +L++
Sbjct: 558 AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMI 617
Query: 208 ---SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
S +GKV ++ + +NI+I C+ G + A ++F D+K+
Sbjct: 618 QDCSASTLNIGKVA---HIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKV 674
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + TY +LI G + G ID + +GL +
Sbjct: 675 KGFIPDNFTYSSLIHGCSASGSID-------------------------LAFGL-----R 704
Query: 325 DEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIH 384
DE L +L P V + I G C NV A F+++ +G PN + Y+ LI
Sbjct: 705 DEMLS-----ARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLID 759
Query: 385 AYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRG 444
+C++ EA +L ++M G P T+ ++ GLC QG + A+KL+++ I
Sbjct: 760 GHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQ---MIENN 816
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
P Y LI+ G ++ + L +M G+LP T
Sbjct: 817 VDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 193/447 (43%), Gaps = 77/447 (17%)
Query: 82 YTYAILMKGLCLTNRVG-DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR------ 134
+T+A+L L RV D LH+ + +P+ + + L+H L +
Sbjct: 11 FTHALLHAAL---RRVRLDPDAALHLFRLAPCRPSLLAHAQLLHILAHARRFPAARALLA 67
Query: 135 --------ARSLMSDMEEP------NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
A +L D+ E + +F +L+ A+ L +AL + ++ G
Sbjct: 68 SLLSAHSVAPTLFPDLVEVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRR 127
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFL 224
+ + ++L L G + AV + ++ G L G+V FL
Sbjct: 128 TLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFL 187
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
KEME G N+ Y+ ++ YC G + A + + +++ G+S N VTY L++G C
Sbjct: 188 KEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKE 247
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR+++ K+++ +K+ EK+ V
Sbjct: 248 GRMEEAEKVVK----------------------------------EIKENEKIVIDEVAY 273
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
I G+C G +EDA R D+MI+ G N+ +Y+ +I+ YC+ R+ E +L++
Sbjct: 274 GALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEY 333
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G ++NT++ G CR+G + A + + +R G+ + Y+ L+ C +G
Sbjct: 334 RGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGT---TLTYNTLLNGFCSRGA 390
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
A L M+ +G++P+ ++ ++LL
Sbjct: 391 IDDALKLWFLMLKRGVVPNEISCSTLL 417
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G D++TY+ L+ G + + F L M S + PN V YN+LI+ LCK+ V RA
Sbjct: 676 GFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRA 735
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
SL + ++ PN +T++ LI +CK+ N A L +K G P V T T ++
Sbjct: 736 VSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHG 795
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC+ G + +A+++L++ M PN TY LI Y G
Sbjct: 796 LCTQGYMEEAIKLLDQ-------------------MIENNVDPNFITYWTLIQGYARCGN 836
Query: 252 LDSALDVFNDMKIDGI---SWN--------FVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+ + ++N+M I G+ +W V L S G ++ KI+++ +
Sbjct: 837 MKAITKLYNEMHICGLLPANWTGHVKQAEPVVNSKNL-----SVGHVEPDCKIIRIKNRT 891
Query: 301 KEGSKGRISPYNSVLY 316
EGS + Y ++ Y
Sbjct: 892 SEGSTVNLYAYYALCY 907
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + ++I G + I+ D + +TP++ +NS++ L K ++ A +
Sbjct: 679 PDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSL 738
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+ + G+ + TY L+ G C + FKL M G++P Y LIH LC
Sbjct: 739 F-NKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLC 797
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
G + A L+ M E PN +T+ LI Y + N+ L + G +P
Sbjct: 798 TQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S + P+ + ++I GL ++ ++ V + + ++P+ +N+++D K D +
Sbjct: 709 SARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCK-DGNT 767
Query: 64 ARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
AF ++KM+ G+Q +TY IL+ GLC + + KLL M V PN + Y TL
Sbjct: 768 TEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTL 827
Query: 123 IHSLCKNGKVGRARSLMSDME 143
I + G + L ++M
Sbjct: 828 IQGYARCGNMKAITKLYNEMH 848
>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g19290-like [Cucumis
sativus]
Length = 885
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 198/433 (45%), Gaps = 27/433 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ D Y+Y I++ CL + LL++M G KP+ + T+I + CK G V AR
Sbjct: 289 EPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARK 348
Query: 138 LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
++E+ N + ++I+I Y K ++ A +L E+ + VPD +T ++
Sbjct: 349 YFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHY 408
Query: 194 SVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVD 237
G+ D +L + G L G+ + L+ + KG P+V
Sbjct: 409 RYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVV 468
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+N +I++Y G+ + A + M G++ + T +L+ L G +D+ L M
Sbjct: 469 AFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDM 528
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
D +G + +L G +R + A +M+ +FP AV + I G C+ G
Sbjct: 529 ID--KGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISG 586
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ DA F M+ +G VPN +Y+ LI +C+ ++ EA +L++EM G LP T N
Sbjct: 587 LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVN 646
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ GLC+QG + A +E M G P Y+ LI C+ A L+++M
Sbjct: 647 MIICGLCKQGRMKLA---IETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM 703
Query: 476 VGKGILPDYLTWN 488
G PD T+N
Sbjct: 704 SDSGWEPDLTTYN 716
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 211/477 (44%), Gaps = 30/477 (6%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ F +I+D KE +++LAR ++ ++ G+ + Y I++ G +
Sbjct: 325 PSIATFCTIIDAFCKEGNVELARKYF-DEIEDMGLSQNTIVYNIMISGYVKARDISQANL 383
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP---NDVTF-SILICAYC 158
L M+++ + P+ + +NTL+ + GK L+ D+ +D + + + C
Sbjct: 384 LFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLC 443
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG---RVMDAVEILEESGEQG--- 212
A+ LLE G P VV ++ + G R A I+ + G
Sbjct: 444 WAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSS 503
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R G + L +M KG + +L+ Y G ++ A ++N+M
Sbjct: 504 TCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEM 563
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
K G+ + V + I GLC G + D + M ++G YNS++ G +
Sbjct: 564 KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDM--LRKGFVPNNFVYNSLIGGFCKVG 621
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ +EAL+ +++M K L P ++ I G C G ++ A F M G P++V Y+
Sbjct: 622 KLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYN 681
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI YC+ V A +LM +M+ G+ P +T+N + G C + A+ ++EE
Sbjct: 682 TLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEE---L 738
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
I G +P + Y+ +I A+C A +L +++ +P+ +T N LL +Q
Sbjct: 739 ISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQ 794
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 202/475 (42%), Gaps = 29/475 (6%)
Query: 46 LKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH 105
+ ++++ VK ++ KM GV + +IL + L G +KL
Sbjct: 187 FSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFG 246
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEE 161
+ +G PN+ +N LI C+ G +L+ M EP+ +++I+I A C +
Sbjct: 247 DVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKG 306
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG--------- 212
AL LL G P + T +++ C G V A + +E + G
Sbjct: 307 QSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYN 366
Query: 213 -------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+ + +EM K +P+ T+N L++ + G + + D+ +
Sbjct: 367 IMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVS 426
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQ-LMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ + D + GLC GR D+ +K+L+ L+E +G + +NS++ +
Sbjct: 427 GLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLE---KGIPPSVVAFNSIIAAYGNAGLE 483
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A M K L P + S ++ G++++A MI++G + + L
Sbjct: 484 ERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVL 543
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
+ Y + V A L EM G G P A F ++GLC G + A + + +R
Sbjct: 544 LDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLR--- 600
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G +P + Y+ LI C+ G A L+ +M +G+LPD T N ++ L +Q
Sbjct: 601 KGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQ 655
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 200/477 (41%), Gaps = 66/477 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + F T+I + + K D + ++ + ++N ++ VK DI A
Sbjct: 325 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 384
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M + D T+ L+ G + DG +LL + G+ +S + + + LC
Sbjct: 385 F-EEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLC 443
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCK---EENLVNALVLLEKSFSFGFVP 180
G+ A L+ ++ E P+ V F+ +I AY EE A ++ K FG P
Sbjct: 444 WAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVK---FGLTP 500
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
T + +L L G + +A L + ++G R+G V
Sbjct: 501 SSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 560
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM+ +G P+ + I+ C +G++ A DVF+DM G N Y++LI G C
Sbjct: 561 NEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKV 620
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G++++ LK+++ E +K G I N ++ GL ++ + A+E M + L P V
Sbjct: 621 GKLNEALKLVR--EMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIV 678
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G+C +V A +M + G P++ Y+ IH YC ++ A +++E+
Sbjct: 679 TYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEEL 738
Query: 403 TGHGYLPIASTFNT----------------------------------VLSGLCRQG 425
G +P T+NT +LS C+QG
Sbjct: 739 ISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQG 795
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 24/298 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR- 65
PP F ++I G A + A ++ +F +TPS +S+L LV++ +D A
Sbjct: 464 PPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWI 523
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A Y M+ G + + +L+ G V L + MK RGV P++V + I+
Sbjct: 524 ALY--DMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFING 581
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G + A + SDM PN+ ++ LI +CK L AL L+ + G +PD
Sbjct: 582 LCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 641
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
+ T+ ++ LC GR+ A+E + G + V G +
Sbjct: 642 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM 701
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+M G P++ TYNI I YC ++ A+ + ++ GI N VTY+T+I +C+
Sbjct: 702 KMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCN 759
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDL 63
PD F I GL + ++ D + R P+ ++NS++ K E + L
Sbjct: 570 PDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKL 629
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
R +M G+ D +T +++ GLC R+ + M G+ P+ V YNTLI
Sbjct: 630 VR-----EMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 684
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
CK VG A LM M EP+ T++I I YC + A+++LE+ S G V
Sbjct: 685 DGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIV 744
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+ VT ++ +C+V ++D IL ++ + +PN T
Sbjct: 745 PNTVTYNTMINAVCNV--ILDHAMILT------------------AKLLKMAFVPNTVTV 784
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNF 271
N+L+S +C+ G+ + A +F K+ I +F
Sbjct: 785 NVLLSQFCKQGMPEKA--IFWGQKLSEIHLDF 814
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 175/451 (38%), Gaps = 95/451 (21%)
Query: 133 GRARSLMSDMEEPNDV---TFSIL---ICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
GR+++L + M E + V FS+L + A+ K E AL +L K G P+ I+
Sbjct: 167 GRSKNLAAFMWEGHRVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAIS 226
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+ LL G ++ + +G R G + G L M +
Sbjct: 227 ILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKF 286
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C P+V +YNI+I++ C G AL + N M +G + T+ T+I C G ++
Sbjct: 287 RCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELA 346
Query: 291 LKILQLMEDS-----------------------------KEGSKGRISP----YNSVLYG 317
K +ED +E I P +N+++ G
Sbjct: 347 RKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAG 406
Query: 318 LYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
YR ++++ L+ + L + + + G C G ++A + + ++E+G P+
Sbjct: 407 HYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPS 466
Query: 376 VVIYDCLIHAYCQ---EER--------------------------------VREASELMK 400
VV ++ +I AY EER + EA +
Sbjct: 467 VVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALY 526
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G+ F +L G R G V A L E M+ GRG P + ++ I LC
Sbjct: 527 DMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNE-MK--GRGVFPDAVAFAAFINGLC 583
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G A + M+ KG +P+ +NSL+
Sbjct: 584 ISGLMTDAYDVFSDMLRKGFVPNNFVYNSLI 614
>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g79080, chloroplastic; Flags: Precursor
gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 215/447 (48%), Gaps = 36/447 (8%)
Query: 59 EDIDLARAFYRKKMMASGVQGDDYTYAI-LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV 117
++ +L+ +F + + +G + ++ L+ LC NR+ +++ +M S G+ P++
Sbjct: 83 DEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDAS 142
Query: 118 IYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKS 173
Y L++ LCK G VG A L+ ME+ N VT++ L+ C +L +L +E+
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 174 FSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
G P+ T + +LE +AV++L+E VKGG
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI-------IVKGG------------E 243
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
PN+ +YN+L++ +C+ G D A+ +F ++ G N V+Y+ L+R LC GR ++ +
Sbjct: 244 PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSL 303
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----LFPRAVDRSLKIL 349
L M+ + YN ++ L + ++AL+ LK+M K A + I
Sbjct: 304 LAEMDGGDRAPS--VVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIA 361
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE-ERVREASELMKEMTGHGYL 408
C +G V+ +C D+MI PN Y+ I + C+ +V+EA +++ ++
Sbjct: 362 RLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKC 420
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ +V++ LCR+GN A +L+ E R G P + YS LI+ LC +G F A
Sbjct: 421 CTHDFYKSVITSLCRKGNTFAAFQLLYEMTRC---GFDPDAHTYSALIRGLCLEGMFTGA 477
Query: 469 -SMLLVQMVGKGILPDYLTWNSLLICL 494
+L + + P +N++++ L
Sbjct: 478 MEVLSIMEESENCKPTVDNFNAMILGL 504
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 172/385 (44%), Gaps = 27/385 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P + + ++RGL +N ++ + + + + P+ ++ +L+ KE
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+++ G + + +Y +L+ G C R D L + ++G K N V YN L+ LC
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG---FVP 180
+G+ A SL+++M+ P+ VT++ILI + AL +L K S G F
Sbjct: 293 CDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVL-KEMSKGNHQFRV 351
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE---------SGEQGRLG-------KVKGGCRFL 224
+ V+ LC G+V V+ L+E G +G KV+ +
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYII 411
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ + K D Y +I+S C G +A + +M G + TY LIRGLC
Sbjct: 412 QSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 471
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
G +++L +ME+S E K + +N+++ GL + + D A+E + M +K P
Sbjct: 472 GMFTGAMEVLSIMEES-ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNET 530
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQM 367
++ + G + +E AK D++
Sbjct: 531 TYAILVEGIAHEDELELAKEVLDEL 555
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 122/293 (41%), Gaps = 51/293 (17%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+ + G PNV L+ C+ L A+ V M GI + Y L+ LC
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
G + +++++ MED P N+V Y
Sbjct: 154 RGNVGYAMQLVEKMEDHG-------YPSNTVTYNAL------------------------ 182
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ G C+ G++ + + ++++++G PN Y L+ A +E EA +L+ E+
Sbjct: 183 ----VRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG------HYSPLIK 457
G P ++N +L+G C++G A+ L E LP G Y+ L++
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE---------LPAKGFKANVVSYNILLR 289
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS-QQTTWLLLLLLNEM 509
LC G ++ A+ LL +M G P +T+N L+ L+ T L +L EM
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 126/350 (36%), Gaps = 95/350 (27%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + ++ + R ++ VK D + P+L +N +L KE D A A
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL- 126
+R+ + A G + + +Y IL++ LC R + LL M P+ V YN LI+SL
Sbjct: 269 FRE-LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 127 ------------------------------------CKNGKVGRARSLMSDME----EPN 146
CK GKV + +M +PN
Sbjct: 328 FHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPN 387
Query: 147 DVTFSIL-----------------------------------ICAYCKEENLVNALVLLE 171
+ T++ + I + C++ N A LL
Sbjct: 388 EGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLY 447
Query: 172 KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE--ESGEQGRL------GKVKGGCRF 223
+ GF PD T + ++ LC G A+E+L E E + + G C+
Sbjct: 448 EMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKI 507
Query: 224 LKE---------MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ M K +PN TY IL+ L+ A +V +++++
Sbjct: 508 RRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRL 557
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 223/495 (45%), Gaps = 30/495 (6%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAI 86
++D + + + + R + P + +F+ +L +V+ ++ + G+ T I
Sbjct: 36 VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS----LMSDM 142
L+ C + F LL + G +PN V +NTLI+ C NG V +A + LM+
Sbjct: 96 LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
++ ++ LI CK +AL LL+K P+++T + V++ LC + DA+
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215
Query: 203 EILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+ +G L G+ + R L M R P+ T+NIL+ +
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G + A VF M G + VTY+ L+ G C + + ++ M K G +
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRM--VKRGLEP 333
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ YN ++ G + + DEA+ K++ + L P + I G C G + +
Sbjct: 334 DVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELV 393
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D+M + G P++V Y+ + A+C+ + +A L +++ G P ++ ++ C+
Sbjct: 394 DEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCK- 451
Query: 425 GNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
G LK+ EE ++ + G P Y+ +I ALC+ F A LL +M PD
Sbjct: 452 ---GEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPD 508
Query: 484 YLTWNSLLICLSQQT 498
+T+ +++ L ++
Sbjct: 509 AVTFETIIGALQERN 523
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 189/437 (43%), Gaps = 61/437 (13%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNR 96
+ + P++ FN++++ + +R +MA G D+++Y L+ GLC +
Sbjct: 116 ILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQ 175
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME------------- 143
D +LL M+ V+PN + Y+T+I LCK+ + A L S +
Sbjct: 176 TRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNS 235
Query: 144 --------------------------EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
P+D TF+IL+ A CKE +V A + G
Sbjct: 236 LIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRG 295
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
PD+VT ++E C V +A E+ M ++G P+V
Sbjct: 296 EKPDIVTYNALMEGFCLSNNVSEAREL-------------------FNRMVKRGLEPDVL 336
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
YN+LI+ YC+ ++D A+ +F +++ + N TY++LI GLC GR+ +++ M
Sbjct: 337 NYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEM 396
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-EKLFPRAVDRSLKILGFCVDGN 356
D G I YN L + ++A+ +Q+ + ++P + + FC
Sbjct: 397 CD--RGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEK 454
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++ A+ ++ G PNV Y +I+A C++ EA L+ +M + P A TF T
Sbjct: 455 LKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFET 514
Query: 417 VLSGLCRQGNVGTALKL 433
++ L + A KL
Sbjct: 515 IIGALQERNETDKAEKL 531
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 176/374 (47%), Gaps = 34/374 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
P+ + TVI GL + R+I D ++ LV+ + + +NS++ V + + R
Sbjct: 193 PNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRL 252
Query: 67 FYRKKMMASG-VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
MM G + DDYT+ IL+ LC R+ + + VM RG KP+ V YN L+
Sbjct: 253 L---TMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEG 309
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C + V AR L + M EP+ + +++LI YCK + + A+VL ++ VP+
Sbjct: 310 FCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPN 369
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ T +++ LC +GR+ E+++E ++G+ P++ TYNI
Sbjct: 370 LATYNSLIDGLCKLGRMSCVQELVDEMCDRGQ-------------------SPDIVTYNI 410
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
+ ++C++ + A+ +F + + GI +F YD ++ C G ++ + LQ +
Sbjct: 411 FLDAFCKSKPYEKAISLFRQI-VQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHL--LI 467
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVED 359
G + Y ++ L ++ DEA+ L +M+ P AV I +
Sbjct: 468 HGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDK 527
Query: 360 AKRCFDQMIEEGGV 373
A++ +MIE G V
Sbjct: 528 AEKLRLEMIERGLV 541
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/486 (25%), Positives = 223/486 (45%), Gaps = 42/486 (8%)
Query: 26 MINDVVKATDL---------VSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMAS 75
M++ KA DL + R N+ S +N +++ K ++ AR F+ M S
Sbjct: 280 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFH-GDMQRS 338
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Y++ L++G C + + + M + G+ P + YN I +LC+ G++ A
Sbjct: 339 GFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDA 398
Query: 136 RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
R L+S M P+ V+++ L+ Y K V A +L + + P +VT +++ LC
Sbjct: 399 RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCES 458
Query: 196 GRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSA 255
G ++G R +EM + P+V TY L+ + + G L A
Sbjct: 459 -------------------GNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMA 499
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED--SKEGSKGRISPYNS 313
+++++M GI + Y T G R+ D K +L E+ +++ ++ YN
Sbjct: 500 TEIYDEMLRKGIKPDGYAYTTRTVGEL---RLGDSEKAFRLHEEMVAEDHHAPDLTIYNV 556
Query: 314 VLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+ GL + ++A+E+ +++ + L P V + I G+ G + A+ +D+M+ +
Sbjct: 557 RIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKR 616
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P+V+ Y LIH + + R+ +A + EM G P T N +L G+C+ GN+ A
Sbjct: 617 LSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAY 676
Query: 432 K-LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
+ L + + GI P Y+ LI C+ ++ L +M+ K I PD T +L
Sbjct: 677 RYLCKMEEEGIS----PNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRAL 732
Query: 491 LICLSQ 496
L +
Sbjct: 733 FKHLEK 738
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 201/494 (40%), Gaps = 59/494 (11%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASG 76
V+R L +RM+N + + + + P++ FN++LD K DL R
Sbjct: 245 VLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAG-DLERVD--------- 294
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
K+ MK R ++ + V YN LI+ K+GK+ AR
Sbjct: 295 -------------------------KIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEAR 329
Query: 137 SLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
DM+ +F+ LI YCK+ A + ++ + G P T + L
Sbjct: 330 RFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRAL 389
Query: 193 CSVGRVMDAVEILEESGEQG------------RLGKVKGGCRFLKEMERKGCLPNVDTYN 240
C GR+ DA E+L ++ K +++ P++ TYN
Sbjct: 390 CEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYN 449
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
LI CE+G L+ A + +M I + +TY TL++G G + +I M
Sbjct: 450 TLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEM--L 507
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNV 357
++G K Y + G R ++A ++M + P +++I G C GN+
Sbjct: 508 RKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNL 567
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E A ++ G VP+ V Y +I Y ++ R + A +L EM P T+ +
Sbjct: 568 EKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVL 627
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G + G + A + E + RG P ++ L+ +C+ G A L +M
Sbjct: 628 IHGHAKAGRLEQAFQYSTEMKK---RGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEE 684
Query: 478 KGILPDYLTWNSLL 491
+GI P+ ++ L+
Sbjct: 685 EGISPNKYSYTILI 698
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 34/331 (10%)
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
Y K+ L+ EK GF+P V VL +L + A E+ E
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYET--------- 264
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
M G +P V T+N ++ S + G L+ ++ +MK I ++ VTY+
Sbjct: 265 ----------MVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI 314
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY--NSVLYGLYRENQQDEALEYLKQM 334
LI G G++++ + M+ S ++PY N ++ G ++ DEA +M
Sbjct: 315 LINGFSKSGKMEEARRFHGDMQR----SGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEM 370
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
++P ++ I C G ++DA+ M P+VV Y+ L+H Y + +
Sbjct: 371 LNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKF 426
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
EAS L ++ P T+NT++ GLC GN+ A +L EE + P Y
Sbjct: 427 VEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQL---IYPDVITY 483
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
+ L+K + G A+ + +M+ KGI PD
Sbjct: 484 TTLLKGFVKNGNLSMATEIYDEMLRKGIKPD 514
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 153/353 (43%), Gaps = 33/353 (9%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S + PD + T++ G + R + D + N+ PS+ +N+++D L +
Sbjct: 403 SSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLE 462
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+++M + + D TY L+KG + ++ M +G+KP+ Y T
Sbjct: 463 GAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRT 522
Query: 124 HSLCKNGKVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ G +A L +M P+ +++ I CK NL A+ K F G
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGL 582
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VPD VT T V+ GR A ++ + EM K P+V T
Sbjct: 583 VPDHVTYTTVIRGYLEKGRFKMARDLYD-------------------EMLSKRLSPSVIT 623
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y +LI + + G L+ A +MK G+ N +T++ L+ G+C G ID+ + L ME
Sbjct: 624 YFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKME 683
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGF 351
+ EG ISP N Y + D L+ +++ KL+ +D+ ++ G+
Sbjct: 684 E--EG----ISP-NKYSYTILISKHCD--LDKWEEVVKLYKEMLDKEIEPDGY 727
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 15/272 (5%)
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++M RKG LP+V NI++ ++ +++ A +V+ M + GI +T++T++
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286
Query: 284 GGRIDDGLKI-LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FP-R 340
G ++ KI L++ + E S+ YN ++ G + + +EA + M++ FP
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSE---VTYNILINGFSKSGKMEEARRFHGDMQRSGFPVT 343
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ I G+C G ++A D+M+ G P Y+ I A C+ R+ +A EL+
Sbjct: 344 PYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLS 403
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHYSPLIKAL 459
M P ++NT++ G + A L+ +D++ G++ P Y+ LI L
Sbjct: 404 SMAA----PDVVSYNTLMHGYIKMRKFVEA-SLLFDDLKA---GNINPSIVTYNTLIDGL 455
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
CE G + A L +M + I PD +T+ +LL
Sbjct: 456 CESGNLEGAQRLKEEMTSQLIYPDVITYTTLL 487
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 360 AKRC---FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
A++C F++MI +G +P+V + ++ + +A E+ + M HG +P TFNT
Sbjct: 220 AEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNT 279
Query: 417 VLSGLCRQGNVGTALKL----------------------------VEEDMRGIG---RGS 445
+L + G++ K+ +EE R G R
Sbjct: 280 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSG 339
Query: 446 LPGSGH-YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
P + + ++PLI+ C++G F A + +M+ GI P T+N + L +
Sbjct: 340 FPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCE 391
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/556 (24%), Positives = 249/556 (44%), Gaps = 73/556 (13%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
P DE +F+ +I G+A ++ + VK + + ++K +N++ V+++ +
Sbjct: 181 PWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGRYMMAKR 240
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y KM++ GV+ +TY +++ G L+ R+ + MK+RG+ P++V YNT+I+ C
Sbjct: 241 YFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYC 300
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ K+ A L +M+ EP+ VT++ +I Y + + + L + E+ SFG P+
Sbjct: 301 RFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEMRSFGIEPNAT 360
Query: 184 TITKVLELLCSVGRVMDAVEILEESG-----------------EQGRLGKVKGGCRFLKE 226
T + +L LC VG++++A IL+ Q + G + LK
Sbjct: 361 TYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKA 420
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSA---LDVFNDMKI-----DGISWNFVTYDTLI 278
M Y +LI + C+ + A LD + +I D + Y+ +I
Sbjct: 421 MATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPII 480
Query: 279 RGLCSGGRIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL 337
LC+ G+ + QLM K G + + N+++ G +E + + E LK M +
Sbjct: 481 EYLCNNGQTAKAEVLFRQLM---KRGVQDQ-DALNNLIRGHAKEGNPESSYEILKIMSRR 536
Query: 338 -FPRAVDR-SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
PR + L I + G DAK D M+E+G VP+ ++ +I + ++ RV+ A
Sbjct: 537 GVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFEDGRVQTA 596
Query: 396 SELMK-----------------------EMTGH-----GYLPI------ASTFNTVLSGL 421
S +M M GH G + + + +++LS L
Sbjct: 597 SRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVL 656
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+G ALKL++ G+ R Y ++ AL G +A +L +++ KG
Sbjct: 657 SEKGKTIAALKLLD---FGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSS 713
Query: 482 PDYLTWNSLLICLSQQ 497
D+ + + L+ L+Q+
Sbjct: 714 TDWKSSDELIKSLNQE 729
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
Query: 216 KVKGGCRFLKEMERKGCL-PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
K++ +F + ER G + + DT+ +I E L+ A + DM G+ W+ +
Sbjct: 128 KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVQKLNHARCILLDMPEKGVPWDEDMF 187
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
LI G + + +KI Q M+D G + I YN++ + R + A Y +M
Sbjct: 188 VVLIESYGKAGIVQESVKIFQKMKDL--GVERTIKSYNTLFKVILRRGRYMMAKRYFNKM 245
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
E + P +L + GF + +E A R FD M G P+ V Y+ +I+ YC+ +++
Sbjct: 246 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYCRFKKM 305
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
EA +L EM G+ P T+ T++ G V L++ EE MR G P + Y
Sbjct: 306 DEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEE-MRSFGIE--PNATTY 362
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILP 482
S L+ LC+ G A +L M+ K I P
Sbjct: 363 STLLPGLCDVGKMVEAKNILKNMMAKHIAP 392
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 189/462 (40%), Gaps = 81/462 (17%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M GV D+ + +L++ V + K+ MK GV+ YNTL + + G+
Sbjct: 175 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNTLFKVILRRGR 234
Query: 132 VGRAR----SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A+ ++S+ EP T+++++ + L AL + + G PD VT
Sbjct: 235 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNT 294
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ C R K+ + EM+ P+V TY +I Y
Sbjct: 295 IINGYC-------------------RFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYL 335
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ------------ 295
+D L +F +M+ GI N TY TL+ GLC G++ + IL+
Sbjct: 336 SVDRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDN 395
Query: 296 ------LMEDSKEGSKGRIS-----------PYNSVLYGLYRENQ-----QDEALEYLKQ 333
L+ SK G + P + YG+ ENQ + A++ L
Sbjct: 396 SIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDT 455
Query: 334 M-EK-----------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ EK + P A + ++ L C +G A+ F Q+++ GV + +
Sbjct: 456 LIEKEIILRHQDTLEMEPSAYNPIIEYL--CNNGQTAKAEVLFRQLMKR-GVQDQDALNN 512
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG---TALKLVEEDM 438
LI + +E + E++K M+ G A+ + ++ +G G TAL + ED
Sbjct: 513 LIRGHAKEGNPESSYEILKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVED- 571
Query: 439 RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
G +P S + +I++L E G Q+AS +++ M+ K +
Sbjct: 572 -----GHVPDSALFRSVIESLFEDGRVQTASRVMMIMIDKNV 608
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 37/305 (12%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
G + K+ L +M KG + D + +LI SY + G++ ++ +F MK G+
Sbjct: 160 GEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTI 219
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+Y+TL + + GR + M EG + YN +L+G + + + AL +
Sbjct: 220 KSYNTLFKVILRRGRYMMAKRYFNKM--VSEGVEPTRHTYNLMLWGFFLSLRLETALRFF 277
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
M+ + P AV + I G+C +++A++ F +M P+VV Y +I Y
Sbjct: 278 DDMKTRGISPDAVTYNTIINGYCRFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSV 337
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA------------------- 430
+RV + + +EM G P A+T++T+L GLC G + A
Sbjct: 338 DRVDDGLRIFEEMRSFGIEPNATTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSI 397
Query: 431 -LKLV------------EEDMRGIGRGSLPG-SGHYSPLIKALCEKGGFQSASMLLVQMV 476
LKL+ E ++ + ++P +GHY LI+ C+ + A LL ++
Sbjct: 398 FLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLI 457
Query: 477 GKGIL 481
K I+
Sbjct: 458 EKEII 462
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 82/212 (38%), Gaps = 38/212 (17%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M GV + Y +L+K GD L M G P+S ++ ++I SL ++
Sbjct: 531 KIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFED 590
Query: 130 GKVGRARSLMSDMEEPN-----------DVTFSILICAYCKEE----NLVN--------- 165
G+V A +M M + N + ++L+ + +E +L+N
Sbjct: 591 GRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLD 650
Query: 166 --------------ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
AL LL+ D + KVL+ L G+ ++A +L + E+
Sbjct: 651 SLLSVLSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCKIMEK 710
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
G K +K + ++G D + +I
Sbjct: 711 GSSTDWKSSDELIKSLNQEGNTKQADVLSRMI 742
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 213/472 (45%), Gaps = 36/472 (7%)
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----- 143
K L T D H M P+ V N L+ S+ K SL S ++
Sbjct: 28 KTLPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP 87
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+P+ VT SI I + + A ++ K GF D T+T +++ LC GR +A+
Sbjct: 88 KPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALN 147
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ + + +G ++GK + L++ME+ G PN+ YN+++ C
Sbjct: 148 LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLC 207
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G++ A + ++M GI + TY++LI G C G+ +++L M KE +
Sbjct: 208 KEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMV-MKEDVRPD 266
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ +N ++ L + EA M K L P V + + G+C+ G + +AK FD
Sbjct: 267 VYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFD 326
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+E G +PNV+ Y LI+ YC+ + V EA L+ EM +P T+N +L GL + G
Sbjct: 327 RMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSG 386
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
V LVE MR G+ P Y+ L+ ++ A L +V GI P+
Sbjct: 387 RVLYEWDLVEA-MRASGQA--PDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIR 443
Query: 486 TWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
T+N L+ L + M + + LS K R +R+ N + +G
Sbjct: 444 TYNILIDGLCKG---------GRMKAAKEIFQLLSVKGCRPNIRTYNIMING 486
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 29/433 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G D +T LMKGLCL R + L S+G + V Y TLI+ LCK G
Sbjct: 116 KIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMG 175
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K A L+ ME+ PN + +++++ CKE + A L + G DV T
Sbjct: 176 KTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYN 235
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C G+ AV +L E +KE R P+V T+NIL+ +
Sbjct: 236 SLIHGFCGAGQFQGAVRLLNE--------------MVMKEDVR----PDVYTFNILVDAL 277
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C+ G++ A +VF M G+ + V+ + L+ G C G + + ++ M + G
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVE--RGKLP 335
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+ Y++++ G + DEAL L +M + L P V + + G G V
Sbjct: 336 NVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLV 395
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M G P+++ Y+ L+ Y + E + +A L + + G P T+N ++ GLC+
Sbjct: 396 EAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKG 455
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G + A ++ + + + +G P Y+ +I L +G A LL++MV G P+
Sbjct: 456 GRMKAAKEIFQ--LLSV-KGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNA 512
Query: 485 LTWNSLLICLSQQ 497
+T++ L+ L ++
Sbjct: 513 VTFDPLVRALLEK 525
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 161/355 (45%), Gaps = 67/355 (18%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
DE + T+I GL + D ++ + + + P+L ++N ++D L KE +
Sbjct: 160 DEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLC 219
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSLCK 128
+M+ G+ D +TY L+ G C + +LL+ M + V+P+ +N L+ +LCK
Sbjct: 220 SEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCK 279
Query: 129 NGKVGRARSL----------------------------MSDMEE-----------PNDVT 149
G V AR++ MS+ +E PN ++
Sbjct: 280 LGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM---DAVEILE 206
+S LI YCK + + AL LL + VPD VT +L+ L GRV+ D VE +
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMR 399
Query: 207 ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
SG+ P++ TYN+L+ Y + LD AL +F + G
Sbjct: 400 ASGQA----------------------PDLITYNVLLDDYLKRECLDKALALFQHIVDTG 437
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
IS N TY+ LI GLC GGR+ +I QL+ S +G + I YN ++ GL RE
Sbjct: 438 ISPNIRTYNILIDGLCKGGRMKAAKEIFQLL--SVKGCRPNIRTYNIMINGLRRE 490
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G + +M+++ ++ + + N+ P +N +LD L K L
Sbjct: 335 PNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDL 394
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M ASG D TY +L+ + L + G+ PN YN LI LCK
Sbjct: 395 VEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A+ + + PN T++I+I +E L A LL + GF P+ VT
Sbjct: 455 GGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVT 514
Query: 185 ITKVLELL 192
++ L
Sbjct: 515 FDPLVRAL 522
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 202/460 (43%), Gaps = 40/460 (8%)
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK-LLHVMKSRGVKPNSVIYN 120
DL AF +++ +G++ +K LC R + LLH M P+++ YN
Sbjct: 141 DLGPAFV-ARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYN 199
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSF 174
T+I SLC + + A ++ M + P+ V+F+ +I + K+ + A L +
Sbjct: 200 TVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMV 259
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVE-ILEESGEQGR----------------LGKV 217
G VPDV T +++ LC R MD E +L + ++G G
Sbjct: 260 QKGVVPDVGTYNSIVDALCK-ARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHW 318
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
K + ++M KG +P+ T++ +SS C+ G A ++F M G + V+Y L
Sbjct: 319 KESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSIL 378
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
+ G + GR D + M D +G N ++ + DEA+ +M +
Sbjct: 379 LHGYATEGRFADMNNLFHSMAD--KGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ P V S I FC G + DA F QMI G PN +Y LIH +C + +A
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496
Query: 396 SELMKEMTGHG-YLPIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGH 451
E + EM G + P F++++ LC +G V A LV I G P
Sbjct: 497 KEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV------IHIGDRPTIVT 550
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ LI C G + A +L MV GI PD +T N+L+
Sbjct: 551 FNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 205/462 (44%), Gaps = 35/462 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLAR 65
PD F TVI G + +V KA +L + + P + +NSI+D L K
Sbjct: 230 PDVVSFNTVIHGFFKQ---GEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKA 286
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
F ++M+ GV+ D TY ++ G + + K+ M S+G+ P++V +++ + S
Sbjct: 287 EFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSS 346
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LCK+G+ A + M P+ V++SIL+ Y E + L G V +
Sbjct: 347 LCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSN 406
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
I ++ G + +A+ + EM+ +G PNV TY+
Sbjct: 407 CHCINILISAHAKRGMMDEAMLV-------------------FTEMQGQGVRPNVVTYST 447
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LIS++C G L A++ F+ M GI N Y +LI G C G + + + M SK
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM-SK 506
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVED 359
+ I ++S+++ L E + +A + + + P V + I G+C+ G +E
Sbjct: 507 GLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEK 566
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A D M+ G P+VV + L+ YC+ ++ + L +EM P T+N VL
Sbjct: 567 AFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLD 626
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE 461
GL R G A K+ E I G+ Y L+K LC
Sbjct: 627 GLLRAGRTSAAKKMFHE---MIDSGTAVDIDTYKILLKGLCR 665
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 214/523 (40%), Gaps = 40/523 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G + + K ++ + P F+S + L K
Sbjct: 300 PDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEI 359
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M G D +Y+IL+ G R D L H M +G+ N N LI + K
Sbjct: 360 FQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAK 419
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A + ++M+ PN VT+S LI A+C+ L +A+ + S G P+
Sbjct: 420 RGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAV 479
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRFLKEM 227
++ C G ++ A E + E +G G+V +
Sbjct: 480 YHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLV 539
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G P + T+N LI YC G ++ A V + M GI + VT +TL+ G C G+I
Sbjct: 540 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKI 599
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DDGL + + M K K YN VL GL R + A + +M + K
Sbjct: 600 DDGLILFREMLHKK--VKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYK 657
Query: 348 IL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
IL G C + ++A F ++ ++ I + +I+A + R EA++L ++
Sbjct: 658 ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTS 717
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G +P ST+ ++ L ++G+V A + + G P S + +I+ L +KG
Sbjct: 718 GLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKS---GCAPSSRLLNDIIRMLLQKGDI 774
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
A + ++ G +I L TT LL+ L +
Sbjct: 775 VKAGYYMSKVDGT------------IISLEASTTSLLMSLFSS 805
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 174/387 (44%), Gaps = 25/387 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M GV+ + TY+ L+ C R+ D + M S G++PN+ +Y++LIH C +G
Sbjct: 432 EMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG 491
Query: 131 KVGRARSLMSDM-----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ +A+ +S+M PN V FS +I + C E +++A + G P +VT
Sbjct: 492 DLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTF 551
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
+++ C VG++ A +L+ G + GK+ G +EM
Sbjct: 552 NSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLH 611
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
K P TYNI++ G +A +F++M G + + TY L++GLC D+
Sbjct: 612 KKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDE 671
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+ + + K I+ N+++ LY+ +++EA + + L P +
Sbjct: 672 AITLFHKL--GAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVM 729
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I +G+VE+A F M + G P+ + + +I Q+ + +A M ++ G
Sbjct: 730 IRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTII 789
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLV 434
AST + ++S +G +K +
Sbjct: 790 SLEASTTSLLMSLFSSKGKHREQIKFL 816
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 8/261 (3%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
V TY IL+ C D + G+ + T ++ LC R D+ + +L
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK----LFPRAVDRSLKILG 350
L S+ YN+V+ L +++ EAL+ +++M K P V + I G
Sbjct: 183 -LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
F G V A F++M+++G VP+V Y+ ++ A C+ + +A ++++M G P
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+N ++ G G+ + K+ + +G +P + +S + +LC+ G + A
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFR---KMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE 358
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
+ M KG +PD ++++ LL
Sbjct: 359 IFQYMTTKGHMPDIVSYSILL 379
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG--YLPIASTFNTVLSGLCR 423
+M E VP+ + Y+ +I + C + R +EA ++++ M G P +FNTV+ G +
Sbjct: 185 RMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFK 244
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
QG V A L E + +G +P G Y+ ++ ALC+ A +L QMV KG+ PD
Sbjct: 245 QGEVSKACNLFNE---MVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301
Query: 484 YLTWNSLLICLSQQTTW 500
+T+N+++ S W
Sbjct: 302 GVTYNAIIHGYSCSGHW 318
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 10/230 (4%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL- 331
TY L+ C R D G + + + G K + L L + DEA++ L
Sbjct: 126 TYGILMDCCCRARRPDLGPAFVARLL--RAGLKTGTIQATTFLKCLCHAKRTDEAVDVLL 183
Query: 332 KQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG--VPNVVIYDCLIHAYC 387
+M +L P A+ + I C D ++A +M +EGG P+VV ++ +IH +
Sbjct: 184 HRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 243
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLP 447
++ V +A L EM G +P T+N+++ LC+ + A + V M + +G P
Sbjct: 244 KQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKA-EFVLRQM--VDKGVEP 300
Query: 448 GSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ +I G ++ ++ + +M KG++PD +T++S + L +
Sbjct: 301 DGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKH 350
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 4/202 (1%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ PD T++ G ++ I+D + + + P+ +N +LD L++
Sbjct: 576 SVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTS 635
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A +M+ SG D TY IL+KGLC + + L H + + K + I NT+I
Sbjct: 636 AAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMI 695
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
++L K + A L + + PN T+ ++I KE ++ A + G
Sbjct: 696 NALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCA 755
Query: 180 PDVVTITKVLELLCSVGRVMDA 201
P + ++ +L G ++ A
Sbjct: 756 PSSRLLNDIIRMLLQKGDIVKA 777
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 227/487 (46%), Gaps = 44/487 (9%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
+IQ PP F +I ++ M V++ + F P + +NSIL V+V++++ L
Sbjct: 126 NIQIPP--PTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFL 183
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+M+ + T+ IL+ GLC + D K+ M +G+ PN++IY ++
Sbjct: 184 LALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIIL 243
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC+ + L++ M+ P+ +T + L+ +CK + A LL+ G+V
Sbjct: 244 SGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYV 303
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+ + +++ L R +V+ CR +M + G P+V Y
Sbjct: 304 LGIKGYSSLIDGLFRAKRY----------------DEVQEWCR---KMFKAGIEPDVVLY 344
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
ILI +CE G++D AL++ NDM G+S + Y+ LI+G C G +D + LQL E
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKA-RSLQL-EI 402
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNV 357
SK Y ++ G+ R DEA + QME L P + + I G C G +
Sbjct: 403 SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGEL 462
Query: 358 EDAKRCFDQMIEEGGVPNVVI-----YDCLI---HAYCQEERVREASELMKEMTGHGYLP 409
E+A+ F +M E G P++ + D ++ + + + +R +A ++ +M +G P
Sbjct: 463 EEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTP 521
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYS-PLIKALCEKGGFQSA 468
++ + +++ CR+G + A L + +R SLP + L + EKG + A
Sbjct: 522 SSAVYKCLMTWSCRKGKLSVAFSLWLKYLR-----SLPSQEDETLKLAEEHFEKGELEKA 576
Query: 469 SMLLVQM 475
L++M
Sbjct: 577 VRCLLEM 583
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 171/401 (42%), Gaps = 65/401 (16%)
Query: 99 DGF----KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
DGF K+L +K+ ++ ++ LI + K+G +A M++ P+ T+
Sbjct: 110 DGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTY 169
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ ++ ++E + AL + + + P+ T +L LC G+ DA+++ +E
Sbjct: 170 NSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDE--- 226
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
M +KG PN Y I++S C+ D + N MK+ G +
Sbjct: 227 ----------------MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
+T + L+ G C G+ID+ +LQL E KEG I Y+S++ GL+R + DE E+
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFE--KEGYVLGIKGYSSLIDGLFRAKRYDEVQEW 328
Query: 331 LKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++M K G P+VV+Y LI +C+
Sbjct: 329 CRKMFK---------------------------------AGIEPDVVLYTILIRGFCEVG 355
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
V A ++ +MT G P +N ++ G C G + A L E + P S
Sbjct: 356 MVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKN---DCFPTSC 412
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI +C G A + QM G P +T+N+L+
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALI 453
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 198/481 (41%), Gaps = 101/481 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PP+ I+ ++ GL +A+ +DV + + + P N++LD K ID A A
Sbjct: 233 PPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFA 292
Query: 67 FYR----------------------------------KKMMASGVQGDDYTYAILMKGLC 92
+ +KM +G++ D Y IL++G C
Sbjct: 293 LLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFC 352
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDV 148
V +L+ M RG+ P++ YN LI C G + +ARSL ++ + P
Sbjct: 353 EVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSC 412
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE-- 206
T++ILIC C+ L A + + + G P ++T +++ LC G + +A +
Sbjct: 413 TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM 472
Query: 207 ESGE---------QG------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
E G+ QG R+ + + R L +M + GC P+ Y L++
Sbjct: 473 EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTW 532
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ---------- 295
C G L A F + +R L S + D+ LK+ +
Sbjct: 533 SCRKGKLSVA---------------FSLWLKYLRSLPS--QEDETLKLAEEHFEKGELEK 575
Query: 296 ----LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK-----QMEKLFPRAVDRSL 346
L+E + + + I+PY L GL + + +EAL+ QM+ P V +
Sbjct: 576 AVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCV---M 632
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G C DGN+E A F +E+G + I + L+ + +++++ A +L+ M G
Sbjct: 633 LINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAG 692
Query: 407 Y 407
Y
Sbjct: 693 Y 693
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 126/306 (41%), Gaps = 36/306 (11%)
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
G RF R+ + T+N++I + D+ + ++K I T+ LI
Sbjct: 80 GFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIA 139
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
G + ++ M+D G K + YNS+L+ + ++ AL QM KL
Sbjct: 140 AYAKSGMAEKAVESFGKMKDF--GCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY 197
Query: 340 RAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
+ IL G C +G +DA + FD+M ++G PN +IY ++ CQ +R +
Sbjct: 198 NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHR 257
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL------------------------ 433
L+ M G P + T N +L G C+ G + A L
Sbjct: 258 LLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLF 317
Query: 434 -------VEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
V+E R + + + P Y+ LI+ CE G A +L M +G+ PD
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTY 377
Query: 486 TWNSLL 491
+N+L+
Sbjct: 378 CYNALI 383
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 203/441 (46%), Gaps = 44/441 (9%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
F ++IR G A + + VK + + ++PS+ FNS+L +L+K +A + +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
GV D YT+ L+ G C + V + F++ M+ P+ V YNT+I LC+ GKV
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 133 GRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A +++S M + PN V+++ L+ YC ++ + A+++ S G P+ VT
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+++ L R + +IL +G F P+ T+NILI ++
Sbjct: 321 TLIKGLSEAHRYDEIKDIL--------IGGNDAFTTF---------APDACTFNILIKAH 363
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL-QLMEDS----K 301
C+ G LD+A+ VF +M + + +Y LIR LC D + +L E K
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK--------ILGFCV 353
+ K + YN + L + KQ EK+F + + R ++ I G C
Sbjct: 424 DECKPLAAAYNPMFEYLCANGKT-------KQAEKVFRQLMKRGVQDPPSYKTLITGHCR 476
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+G + A M+ VP++ Y+ LI + A + ++ M YLP+A+T
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 414 FNTVLSGLCRQGNVGTALKLV 434
F++VL+ L ++ + LV
Sbjct: 537 FHSVLAELAKRKFANESFCLV 557
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 170/407 (41%), Gaps = 69/407 (16%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN 146
+++ L L DG + + ++G + ++ L + + AR+ + +E +
Sbjct: 71 VLQTLRLIKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRS 130
Query: 147 -------DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
D F+ LI +Y ++ L + G P V+T +L +L GR
Sbjct: 131 NGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTG 190
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERK-GCLPNVDTYNILISSYCETGVLDSALDV 258
A ++ +E M R G P+ T+N LI+ +C+ ++D A +
Sbjct: 191 MAHDLFDE-------------------MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRI 231
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGL 318
F DM++ + + VTY+T+I GLC G++ ++VL G+
Sbjct: 232 FKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA---------------------HNVLSGM 270
Query: 319 YRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVI 378
LK+ + P V + + G+C+ +++A F M+ G PN V
Sbjct: 271 ------------LKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 379 YDCLIHAYCQEERVREASELMKEMTGHG----YLPIASTFNTVLSGLCRQGNVGTALKLV 434
Y+ LI + R E +++ + G+ + P A TFN ++ C G++ A+K+
Sbjct: 319 YNTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+E + P S YS LI+ LC + F A L ++ K +L
Sbjct: 377 QE---MLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 194/463 (41%), Gaps = 43/463 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD F T+I G + M+++ + + ++ P + +N+I+D L VK ++
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+K A+ V + +Y L++G C+ + + + H M SRG+KPN+V YNTLI
Sbjct: 267 LSGMLKK---ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 124 HSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L + + + ++ + P+ TF+ILI A+C +L A+ + ++ +
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL----------------------- 214
PD + + ++ LC A + E E+ L
Sbjct: 384 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN 443
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
GK K + +++ ++G + + +Y LI+ +C G A ++ M + TY
Sbjct: 444 GKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETY 502
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+ LI GL G LQ M S + ++SVL L + +E+ + M
Sbjct: 503 ELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA--TTFHSVLAELAKRKFANESFCLVTLM 560
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
EK + +D S +++ ++ +++ + G +V + L+ C+ ++
Sbjct: 561 LEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGY--LVKMEELLGYLCENRKLL 618
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+A L+ + T NTV+ GLC+ A L E
Sbjct: 619 DAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNE 661
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 119/306 (38%), Gaps = 27/306 (8%)
Query: 9 PDESIFITVIRGL------GRAR-MINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-D 60
PD + + +IR L RA + N++ + L+ + P +N + + L
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGK 445
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
A +R+ +M GVQ D +Y L+ G C + ++LL +M R P+ Y
Sbjct: 446 TKQAEKVFRQ-LMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503
Query: 121 TLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
LI L K G+ A + M P TF ++ K + + L+
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER------- 229
++ T+V+ LL S + A I+ + G L K++ +L E +
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTL 623
Query: 230 ------KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
K + ++DT N +I C+ A ++N++ G + L L +
Sbjct: 624 VLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEA 683
Query: 284 GGRIDD 289
G+ ++
Sbjct: 684 AGKWEE 689
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 29/402 (7%)
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++A Q D +Y L+ GLC +L+ ++ R +KP+ V+YN +I SLC
Sbjct: 161 FHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLC 220
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KN VG A +L S+M PN VT++ LI +C L+ A+ LL + PDV
Sbjct: 221 KNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVY 280
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGR-----------------LGKVKGGCRFLKE 226
T + +++ L G+ M A +I+ + + +VK
Sbjct: 281 TFSILIDALGKEGK-MKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNS 339
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M + G P V +Y I+I C+T ++D A+ +F +MK + N +T+++LI GLC GR
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
I ++ M D + + + Y+S++ L + D+A+ K+M +++ P
Sbjct: 400 IAYVWDLVDKMRDRSQLAD--VITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTY 457
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
++ I G C G ++ A+ F ++ +G ++ Y +I +C+ EA L+ +M
Sbjct: 458 TILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMED 517
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+G +P A TF+ ++ L + A KL+ E I RG L
Sbjct: 518 NGCIPNAITFDIIICALFEKDENDKAEKLLRE---MIARGLL 556
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 194/419 (46%), Gaps = 27/419 (6%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTF 150
N D L + M P + +N ++ SL K + A SL ++ + VT
Sbjct: 48 NDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTL 107
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI------ 204
+ILI +C + + +L G+ PDV+T+T +++ LC G V A++
Sbjct: 108 NILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA 167
Query: 205 LEESGEQ----------GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
LE ++ ++G+ K + ++ +E + P+V YNI+I S C+ ++
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGE 227
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A +++++M I N VTY TLI G C G + + + +L M+ + + ++ +
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMK--LKNINPDVYTFSIL 285
Query: 315 LYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ L +E + A L M K + P V + + G+ + V+ AK F+ M + G
Sbjct: 286 IDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGV 345
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P V Y +I C+ + V EA L +EM +P TFN+++ GLC+ G +
Sbjct: 346 TPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWD 405
Query: 433 LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LV++ MR R L YS LI ALC+ A L +M+ + I PD T+ L+
Sbjct: 406 LVDK-MR--DRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILI 461
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 199/434 (45%), Gaps = 31/434 (7%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
++ G D T L+KGLCL V K + + + + + Y TLI+ LCK G+
Sbjct: 130 ILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGE 189
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A LM ++EE P+ V ++I+I + CK + + A L + + P+VVT T
Sbjct: 190 TKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTT 249
Query: 188 VLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEMERKG 231
++ C +G +++AV +L E + G+ GK+K L M +
Sbjct: 250 LIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAY 309
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+V TYN L+ Y + A VFN M G++ +Y +I GLC +D+ +
Sbjct: 310 VKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAI 369
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
+ + M+ K I+ +NS++ GL + + + + +M + S I
Sbjct: 370 SLFEEMK-HKNVIPNTIT-FNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLID 427
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
C + +++ A F +MI + P++ Y LI C+ R++ A E+ + + GY
Sbjct: 428 ALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHL 487
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+ ++SG C+ G AL L+ ED G +P + + +I AL EK
Sbjct: 488 DIRTYTVMISGFCKAGLFDEALALLSKMED-----NGCIPNAITFDIIICALFEKDENDK 542
Query: 468 ASMLLVQMVGKGIL 481
A LL +M+ +G+L
Sbjct: 543 AEKLLREMIARGLL 556
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 27/295 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLARA 66
PD F +I LG+ + ++ + + P + +NS++D LV E
Sbjct: 277 PDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYV 336
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F M SGV +Y I++ GLC T V + L MK + V PN++ +N+LI L
Sbjct: 337 F--NSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGL 394
Query: 127 CKNGKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK+G++ L+ M + + +T+S LI A CK +L A+ L +K + PD+
Sbjct: 395 CKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDM 454
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T +++ LC GR+ A E+ + + KG ++ TY ++
Sbjct: 455 YTYTILIDGLCKGGRLKIAQEVFQH-------------------LLIKGYHLDIRTYTVM 495
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
IS +C+ G+ D AL + + M+ +G N +T+D +I L D K+L+ M
Sbjct: 496 ISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREM 550
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 198/433 (45%), Gaps = 27/433 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARS 137
+ D Y+Y I++ CL + LL++M G KP+ + T+I + CK G V AR
Sbjct: 320 EPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARK 379
Query: 138 LMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
++E+ N + ++I+I Y K ++ A +L E+ + VPD +T ++
Sbjct: 380 YFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHY 439
Query: 194 SVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVD 237
G+ D +L + G L G+ + L+ + KG P+V
Sbjct: 440 RYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVV 499
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+N +I++Y G+ + A + M G++ + T +L+ L G +D+ L M
Sbjct: 500 AFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDM 559
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
D +G + +L G +R + A +M+ +FP AV + I G C+ G
Sbjct: 560 ID--KGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISG 617
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ DA F M+ +G VPN +Y+ LI +C+ ++ EA +L++EM G LP T N
Sbjct: 618 LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVN 677
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
++ GLC+QG + A +E M G P Y+ LI C+ A L+++M
Sbjct: 678 MIICGLCKQGRMKLA---IETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM 734
Query: 476 VGKGILPDYLTWN 488
G PD T+N
Sbjct: 735 SDSGWEPDLTTYN 747
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 211/477 (44%), Gaps = 30/477 (6%)
Query: 44 PSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ F +I+D KE +++LAR ++ ++ G+ + Y I++ G +
Sbjct: 356 PSIATFCTIIDAFCKEGNVELARKYF-DEIEDMGLSQNTIVYNIMISGYVKARDISQANL 414
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP---NDVTF-SILICAYC 158
L M+++ + P+ + +NTL+ + GK L+ D+ +D + + + C
Sbjct: 415 LFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLC 474
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG---RVMDAVEILEESGEQG--- 212
A+ LLE G P VV ++ + G R A I+ + G
Sbjct: 475 WAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSS 534
Query: 213 ----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
R G + L +M KG + +L+ Y G ++ A ++N+M
Sbjct: 535 TCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEM 594
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
K G+ + V + I GLC G + D + M ++G YNS++ G +
Sbjct: 595 KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDM--LRKGFVPNNFVYNSLIGGFCKVG 652
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ +EAL+ +++M K L P ++ I G C G ++ A F M G P++V Y+
Sbjct: 653 KLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYN 712
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI YC+ V A +LM +M+ G+ P +T+N + G C + A+ ++EE
Sbjct: 713 TLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEE---L 769
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
I G +P + Y+ +I A+C A +L +++ +P+ +T N LL +Q
Sbjct: 770 ISVGIVPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQ 825
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 200/472 (42%), Gaps = 27/472 (5%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM 107
+ ++++ VK ++ KM GV + +IL + L G +KL +
Sbjct: 220 VLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV 279
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
+G PN+ +N LI C+ G +L+ M EP+ +++I+I A C +
Sbjct: 280 VRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQS 339
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------- 212
AL LL G P + T +++ C G V A + +E + G
Sbjct: 340 SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 399
Query: 213 -----RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+ + +EM K +P+ T+N L++ + G + + D+ + G+
Sbjct: 400 ISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGL 459
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ D + GLC GR D+ +K+L+ + +G + +NS++ ++ A
Sbjct: 460 LHDSSLCDVTVAGLCWAGRYDEAMKLLENL--LGKGIPPSVVAFNSIIAAYGNAGLEERA 517
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
M K L P + S ++ G++++A MI++G + + L+
Sbjct: 518 FYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDG 577
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
Y + V A L EM G G P A F ++GLC G + A + + +R +G
Sbjct: 578 YFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLR---KGF 634
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+P + Y+ LI C+ G A L+ +M +G+LPD T N ++ L +Q
Sbjct: 635 VPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQ 686
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 199/477 (41%), Gaps = 66/477 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P + F T+I + + K D + ++ + ++N ++ VK DI A
Sbjct: 356 PSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLL 415
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ ++M + D T+ L+ G + DG +LL + G+ +S + + + LC
Sbjct: 416 F-EEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLC 474
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCK---EENLVNALVLLEKSFSFGFVP 180
G+ A L+ ++ P+ V F+ +I AY EE A ++ K FG P
Sbjct: 475 WAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVK---FGLTP 531
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
T + +L L G + +A L + ++G R+G V
Sbjct: 532 SSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLW 591
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM+ +G P+ + I+ C +G++ A DVF+DM G N Y++LI G C
Sbjct: 592 NEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKV 651
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
G++++ LK+++ M +K G I N ++ GL ++ + A+E M + L P V
Sbjct: 652 GKLNEALKLVREM--NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIV 709
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G+C +V A +M + G P++ Y+ IH YC ++ A +++E+
Sbjct: 710 TYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEEL 769
Query: 403 TGHGYLPIASTFNT----------------------------------VLSGLCRQG 425
G +P T+NT +LS C+QG
Sbjct: 770 ISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQG 826
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 24/298 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLAR- 65
PP F ++I G A + A ++ +F +TPS +S+L LV++ +D A
Sbjct: 495 PPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWI 554
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A Y M+ G + + +L+ G V L + MK RGV P++V + I+
Sbjct: 555 ALY--DMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFING 612
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G + A + SDM PN+ ++ LI +CK L AL L+ + G +PD
Sbjct: 613 LCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 672
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLK 225
+ T+ ++ LC GR+ A+E + G + V G +
Sbjct: 673 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM 732
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+M G P++ TYNI I YC ++ A+ + ++ GI N VTY+T+I +C+
Sbjct: 733 KMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVCN 790
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDL 63
PD F I GL + ++ D + R P+ ++NS++ K E + L
Sbjct: 601 PDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKL 660
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
R +M G+ D +T +++ GLC R+ + M G+ P+ V YNTLI
Sbjct: 661 VR-----EMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLI 715
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
CK VG A LM M EP+ T++I I YC + A+++LE+ S G V
Sbjct: 716 DGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIV 775
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+ VT ++ +C+V ++D IL ++ + +PN T
Sbjct: 776 PNTVTYNTMINAVCNV--ILDHAMILT------------------AKLLKMAFVPNTVTV 815
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNF 271
N+L+S +C+ G+ + A +F K+ I +F
Sbjct: 816 NVLLSQFCKQGMPEKA--IFWGQKLSEIHLDF 845
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 152/383 (39%), Gaps = 29/383 (7%)
Query: 133 GRARSLMSDMEEPNDV------TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
GR+++L + M E + V L+ A+ K E AL +L K G P+ I+
Sbjct: 198 GRSKNLAAFMWEGHRVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAIS 257
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+ LL G ++ + +G R G + G L M +
Sbjct: 258 ILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKF 317
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
C P+V +YNI+I++ C G AL + N M +G + T+ T+I C G ++
Sbjct: 318 RCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELA 377
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
K +ED G YN ++ G + +A ++M + + P + + +
Sbjct: 378 RKYFDEIEDM--GLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLV 435
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G G ED R + G + + + D + C R EA +L++ + G G
Sbjct: 436 AGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIP 495
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P FN++++ GN G + + G P S S L+ +L KG A
Sbjct: 496 PSVVAFNSIIAA---YGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEA 552
Query: 469 SMLLVQMVGKGILPDYLTWNSLL 491
+ L M+ KG + + LL
Sbjct: 553 WIALYDMIDKGFPVTNMAFTVLL 575
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 148/634 (23%), Positives = 257/634 (40%), Gaps = 90/634 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P S + +I L R + ++ + ++ +F +++ V +E +D A +
Sbjct: 193 PAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSL 252
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M ++ + D Y + + +V +K H MKS G+ P+ V Y ++I LC
Sbjct: 253 L-DEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLC 311
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ A L +E+ P ++ +I Y A LLE+ + G +P V+
Sbjct: 312 KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 371
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRFLKEME 228
+L L RV +A+ I EE R GK+ +ME
Sbjct: 372 AYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDME 431
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R G PNV T NI+I C+ L+ A +F M + N VT+ +LI GL GR+D
Sbjct: 432 RAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVD 491
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM-------------- 334
D + + M D + Y S++ ++ ++++ + K+M
Sbjct: 492 DAYSLYEKMLDCGHVPGAIV--YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549
Query: 335 -----------EK------------LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
EK P A S+ I G G + F M E+G
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
V + Y+ +I +C+ +V +A +L++EM G+ P T+ +V+ GL + + A
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669
Query: 432 KLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
L EE GI + YS LI + G A +++ +++ KG+ P+ TWN L
Sbjct: 670 MLFEEAKSNGIKLNVVV----YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCL 725
Query: 491 LICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKR----------CKLRSLNHLAHGAGS 540
L L + +NE + + +L + C++R N A
Sbjct: 726 LDALVKAEE------INEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNK----AFV 775
Query: 541 VW-----LGLRIHDTTHTFIIDRRVEIGHVFCSS 569
W LGL+ + T+T +I + G++ +S
Sbjct: 776 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 809
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/487 (23%), Positives = 207/487 (42%), Gaps = 60/487 (12%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
S P + ++ LG+ R + + ++ + + R + P++ +N ++D+L +E A
Sbjct: 366 SIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILIDMLCREGKLNAAL 424
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
R M +G+ + T I++ LC ++ + + M + PN+V +++LI L
Sbjct: 425 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGL 484
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK---------------------EE 161
K G+V A SL M + P + ++ LI ++ K +
Sbjct: 485 GKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDL 544
Query: 162 NLVNALV--------------LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
L+N + L + + GF+PD + + ++ L G + E+
Sbjct: 545 TLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYA 604
Query: 208 SGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
EQG + GKV + L+EM+ KG P V TY +I +
Sbjct: 605 MKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDR 664
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A +F + K +GI N V Y +LI G GRID+ I++ E ++G + +
Sbjct: 665 LDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME--ELMQKGLTPNVYTW 722
Query: 312 NSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N +L L + + +EAL + M+ K P + S+ I G C A + +M +
Sbjct: 723 NCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQK 782
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G PN + Y +I + + EAS L +G +P ++++N ++ GL
Sbjct: 783 LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMD 842
Query: 430 ALKLVEE 436
A L EE
Sbjct: 843 AYALFEE 849
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 39/311 (12%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K++ ++ M + P Y ILI + E D L +F+ M+ G N +
Sbjct: 175 KLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFT 234
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSK--------------EGSKGRIS------------ 309
TLIR GR+D L +L M+ + G G++
Sbjct: 235 TLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSH 294
Query: 310 -------PYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDA 360
Y S++ L + N+ DEA+E +Q+E + P A + I+G+ G ++A
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
++ +G +P+V+ Y+C++ ++ RV EA + +EM +P T+N ++
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDM 413
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LCR+G + AL++ ++ R G P + +I LC+ + A + M K
Sbjct: 414 LCREGKLNAALEIRDDMERA---GLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVC 470
Query: 481 LPDYLTWNSLL 491
P+ +T++SL+
Sbjct: 471 TPNAVTFSSLI 481
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 6/231 (2%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PP + +VI GL + +++ + + ++ +++S++D K ID A
Sbjct: 646 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY- 704
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+++M G+ + YT+ L+ L + + MK PN + Y+ LI+ L
Sbjct: 705 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 764
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C+ K +A +M++ PN +T++ +I K N++ A L + + G +PD
Sbjct: 765 CRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDS 824
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCL 233
+ ++E L S + MDA + EE+ +G K L + + CL
Sbjct: 825 ASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECL 875
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 54/124 (43%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
++ PP++ + +I GL R R N + + + P+ + +++ L K L
Sbjct: 748 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 807
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ + A+G D +Y +++GL N+ D + L + +G ++ L+
Sbjct: 808 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 867
Query: 125 SLCK 128
+L K
Sbjct: 868 ALHK 871
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 194/396 (48%), Gaps = 31/396 (7%)
Query: 47 KIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
K+F+SI+ + E + + K++ G++ D ++ +IL+ C +RV G +L
Sbjct: 67 KLFSSIVRMGHYETV----VYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSK 122
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
+ G++P+ V + TL++ LC GK+ + L DM +PN T++++I + K
Sbjct: 123 ILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGK 182
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
AL L++ G VP+VV + +++ C G++ +A + +
Sbjct: 183 ANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFD---------------- 226
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
M KGC PNV TY L++ YC+ ++ A+ + ++ G+ + VT+ T+I GLC
Sbjct: 227 ---LMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
GR ++ + + G I Y +L GL + +EA ++M++ + P
Sbjct: 284 RAGRPLAAQQLFRYI--CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ I C G ++D K F ++I+EG PNV Y L+ A C+E + EA +L +
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+M G P +N ++ G + + A +LVEE
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/283 (31%), Positives = 149/283 (52%), Gaps = 11/283 (3%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R+G + KE+E G ++ + +ILI+ +C +D L V + + G+ + V
Sbjct: 74 RMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIV 133
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
T+ TL+ GLC G++D +++ L +D G + + YN ++ L + + +EAL +L
Sbjct: 134 TFTTLLNGLCMEGKMD---QVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFL 190
Query: 332 KQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
KQMEK+ P V+ S I G+C+ G +++A+ FD M+ +G PNV Y L++ YC+
Sbjct: 191 KQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKI 250
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI-GRGSLPG 448
ER+ EA +L+ E G +P TF T++SGLCR G A +L R I G P
Sbjct: 251 ERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQL----FRYICAHGHTPN 306
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y L+ LC+ G + A L +M + P+ + + L+
Sbjct: 307 IMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILI 349
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 41/356 (11%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G++ T+ L+ GLC+ ++ L M RG++PN YN +I+SL K+G
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSG 181
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K A + ME+ PN V +S LI YC + A + + S G P+V T T
Sbjct: 182 KANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYT 241
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++ C + R+ +AV++L+ E RKG +P++ T+ +IS
Sbjct: 242 SLMNGYCKIERIEEAVQLLD-------------------ETLRKGLVPDIVTFTTIISGL 282
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G +A +F + G + N +TY L+ GLC G +++ + Q M+ S K
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST--VKP 340
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK---------ILGFCVDGNV 357
+ Y ++ L + + +K ++LF R +D LK + C +G +
Sbjct: 341 NLVIYTILIDSLCKCGK-------IKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLI 393
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
+A + F +M E+G P+ Y+ +I + Q + A +L++EM G+ A+T
Sbjct: 394 IEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 4/177 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +++ G + I + V+ D R + P + F +I+ L + LA
Sbjct: 235 PNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQL 294
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + A G + TY +L+ GLC + + F L M+ VKPN VIY LI SLCK
Sbjct: 295 FRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCK 354
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
GK+ + L S + + PN T++ L+ A CKE ++ A L K G PD
Sbjct: 355 CGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 199/398 (50%), Gaps = 31/398 (7%)
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICA 156
+L+ +M++ G +PN V YN +I ++C+ G V +AR L++ + +PN V ++ ++
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
C E V+A LL++ P+ T+ ++ L +G L K
Sbjct: 61 LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTL----------------SRKGLLQK 104
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
V R+L++M + GC NV TYN +IS CE G +DSAL++ ++M+ G + VTY+T
Sbjct: 105 VT---RYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNT 161
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
L++GLCS + +D +++ M S+ +N+++ L ++ +A E KQM +
Sbjct: 162 LLKGLCSADQWEDAEELMIKM--SQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPE 219
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVRE 394
P + S I G G +E A ++M +G + +Y L + +E+++ E
Sbjct: 220 KGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTD-KMYQLLTESLNKEDKIEE 278
Query: 395 ASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSP 454
+++ ++ G P FNTVL LCR G A+ ++ DM + G +P Y
Sbjct: 279 VVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVL-ADM--VSYGCMPDELTYII 335
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
LI+ L +G Q A L+ ++ + +L + L N L+
Sbjct: 336 LIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNEALL 373
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 169/365 (46%), Gaps = 37/365 (10%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M A G + + TY +++ +C V +LL+ + SRG KPN+V YNT++ LC +
Sbjct: 7 MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
A L+ +M PN+ T ++++ ++ L LEK G +VVT
Sbjct: 67 WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKEMERKG 231
V+ +C G V A+E+L G + KG C + +M +
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
CLP+ T+N +IS C+ G++ A +VF M G + N TY T+I GL G+++ L
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246
Query: 292 KILQLMEDSKEGSKGRISPYNS-VLYGLYRE--NQQDEALEYLKQMEKL-----FPRAVD 343
++L M SKG YN+ +Y L E N++D+ E ++ + KL P+ V
Sbjct: 247 ELLNEM-----ASKG----YNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVL 297
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ +L C +G + A M+ G +P+ + Y LI E ++EA EL+ +
Sbjct: 298 FNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLC 357
Query: 404 GHGYL 408
L
Sbjct: 358 SRDVL 362
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 139/305 (45%), Gaps = 19/305 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + TV++GL D + D + R N P+ N I++ L ++ + Y
Sbjct: 49 PNTVNYNTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRY 108
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM G + TY ++ G+C V +LL M+S G KP+ V YNTL+ LC
Sbjct: 109 LEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCS 168
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A LM M + P++VTF+ +I C++ ++ A + ++ G P+ T
Sbjct: 169 ADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTT 228
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRFLKEMER 229
+ ++ L G++ A+E+L E +G + K++ + + +++
Sbjct: 229 YSTIIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQD 288
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P +N ++ C G D A+DV DM G + +TY LI GL G + +
Sbjct: 289 SGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQE 348
Query: 290 GLKIL 294
+++
Sbjct: 349 ARELV 353
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 8/259 (3%)
Query: 256 LDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVL 315
+++ + M+ +G N VTY+ +I +C G +D ++L + G K YN+VL
Sbjct: 1 MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSL--PSRGCKPNTVNYNTVL 58
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
GL + +A E L +M E P ++ + G ++ R ++M + G
Sbjct: 59 KGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCT 118
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
NVV Y+ +I C++ V A EL+ M G P T+NT+L GLC A +L
Sbjct: 119 ANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEEL 178
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLIC 493
+ ++ LP + ++ +I LC+KG A + QM KG P+ T+++++
Sbjct: 179 M---IKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGG 235
Query: 494 LSQQTTW-LLLLLLNEMVS 511
L++ L LLNEM S
Sbjct: 236 LAKAGKMEQALELLNEMAS 254
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ ++ + L + I +VV+ + ++P +FN++L VL +
Sbjct: 260 DKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLA 319
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
M++ G D+ TY IL++GL + + +L+ + SR V NS+I N
Sbjct: 320 DMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKN 369
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 222/503 (44%), Gaps = 61/503 (12%)
Query: 43 TPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
P++ +N ++D + +LA A + +++ +G+ D +Y L+ G V +
Sbjct: 119 APTIYTYNILIDCYRRMHRPELALAVF-GRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAY 177
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L + M + V P+ V YN+LI LCK ++ ++ ++ M + PN+ T++ LI Y
Sbjct: 178 ELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGY 237
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE---SGEQGRL 214
++ + ++ S G +P VV + LC R+ +A +I + G + +
Sbjct: 238 STAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNI 297
Query: 215 --------GKVKGGC-----RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
G GC + M KG +PN +NILI++Y G++D A+ +F D
Sbjct: 298 ISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFED 357
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED---------------------- 299
M+ G+ + VT+ T+I LC GR+DD L M D
Sbjct: 358 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGE 417
Query: 300 ------------SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+K+ + ++S++ L++E + E + + M + P V +
Sbjct: 418 LVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFN 477
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+C+ GN+E+A D M G PN IY L+ YC+ R+ +A + ++M
Sbjct: 478 SLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 537
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P + +N +L GL + A K+ E I G+ Y ++ LC
Sbjct: 538 GVKPTSVLYNIILHGLFQARRTTAAKKMFHE---MIESGTTVSIQTYGVVLGGLCRNNCT 594
Query: 466 QSASMLLVQMVGKGILPDYLTWN 488
A+MLL ++ + D +T+N
Sbjct: 595 DEANMLLEKLFAMNVKFDIITFN 617
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/537 (23%), Positives = 226/537 (42%), Gaps = 72/537 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRF---NMTPSLKIFNSILDVLVKEDIDLAR 65
PD + T+I G + +V KA +L + +++P + +NS++D L K +
Sbjct: 155 PDVCSYNTLIDGFSKE---GEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKS 211
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
++M+ +G++ ++ TY L+ G + ++ M S G+ P V N+ IH+
Sbjct: 212 ERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHA 271
Query: 126 LCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC++ ++ A+ + M +PN +++S L+ Y E N L+ S G VP+
Sbjct: 272 LCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPN 331
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
++ G + A+ I E+ M+ KG +P+ T+
Sbjct: 332 HRFFNILINAYARCGMMDKAMLIFED-------------------MQNKGMIPDTVTFAT 372
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG---------------- 285
+ISS C G LD AL FN M G+ + Y LI+G C+ G
Sbjct: 373 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD 432
Query: 286 --------------------RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
R+ +G I+ LM + G + + +NS++ G +
Sbjct: 433 IPPPGVKYFSSIINNLFKEGRVAEGKDIMDLM--VQTGQRPNVVTFNSLMEGYCLVGNME 490
Query: 326 EALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
EA L M + P + G+C +G ++DA F M+ +G P V+Y+ ++
Sbjct: 491 EAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
H Q R A ++ EM G T+ VL GLCR A L+E+ +
Sbjct: 551 HGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVK 610
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ ++ +I A+ + G Q A L + G++P T+N ++ L ++ ++
Sbjct: 611 FDIIT---FNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESY 664
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 188/444 (42%), Gaps = 41/444 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T++ G ++ +L+ + P+ + FN +++ + +
Sbjct: 295 PNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLI 354
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ M G+ D T+A ++ LC R+ D + M GV P+ +Y LI C
Sbjct: 355 FEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCN 414
Query: 129 NGKVGRARSLMS-----DMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+G++ +A+ L+S D+ P FS +I KE + +++ G P+VV
Sbjct: 415 HGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVV 474
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++E C VG + +A +L+ M G PN Y L+
Sbjct: 475 TFNSLMEGYCLVGNMEEAFALLDA-------------------MASIGIEPNCYIYGTLV 515
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC+ G +D AL VF DM G+ V Y+ ++ GL R K+ M +S G
Sbjct: 516 DGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIES--G 573
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVD-------GN 356
+ I Y VL GL R N DEA L EKLF A++ I+ F + G
Sbjct: 574 TTVSIQTYGVVLGGLCRNNCTDEANMLL---EKLF--AMNVKFDIITFNIVISAMLKVGR 628
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
++AK F + G VP V Y+ +I +EE EA L + G P + N
Sbjct: 629 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 688
Query: 417 VLSGLCRQGNVGTA---LKLVEED 437
++ L ++ V A L +++E+
Sbjct: 689 IVRMLLKKAEVAKASNYLSIIDEN 712
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 150/352 (42%), Gaps = 26/352 (7%)
Query: 143 EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
+ P T++ILI Y + AL + + G PDV CS ++D
Sbjct: 118 DAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDV----------CSYNTLIDGF 167
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ G+V +M + P+V TYN LI C+T + + V M
Sbjct: 168 ---------SKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQM 218
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
GI N TY++LI G + G + +++ + M S G + NS ++ L R N
Sbjct: 219 VDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSS--GLIPCVVNCNSFIHALCRHN 276
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ EA + M + P + S + G+ +G + + M+ +G VPN ++
Sbjct: 277 RIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFN 336
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI+AY + + +A + ++M G +P TF TV+S LCR G + AL
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH---M 393
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+ G P Y LI+ C G A L+ +M+ K I P + + S +I
Sbjct: 394 VDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 445
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 29/300 (9%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILD--VLVKEDIDLAR 65
PP F ++I L + + + DL+ + P++ FNS+++ LV ++
Sbjct: 435 PPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVG---NMEE 491
Query: 66 AFYRKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
AF MAS G++ + Y Y L+ G C R+ D + M +GVKP SV+YN ++H
Sbjct: 492 AFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILH 551
Query: 125 SLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L + + A+ + +M E T+ +++ C+ A +LLEK F+
Sbjct: 552 GLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKF 611
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
D++T V+ + VGR +A E+ + G +P V TYN
Sbjct: 612 DIITFNIVISAMLKVGRRQEAKEL-------------------FAAISTYGLVPTVHTYN 652
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
++IS+ + + A ++F ++ G + + + ++R L + L +++++
Sbjct: 653 LMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDEN 712
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 13/216 (6%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
SI P+ I+ T++ G + I+D + + + P+ ++N IL L +
Sbjct: 501 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTT 560
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A +M+ SG TY +++ GLC N + LL + + VK + + +N +I
Sbjct: 561 AAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 620
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV---NALVLLEKSFSF 176
++ K G+ A+ L + + P T++++I KEE+ N + +EKS
Sbjct: 621 SAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKS--- 677
Query: 177 GFVPDVVTITKVLELL---CSVGRVMDAVEILEESG 209
G PD + ++ +L V + + + I++E+
Sbjct: 678 GRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENN 713
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 226/518 (43%), Gaps = 67/518 (12%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PPD + VI GL R+ +D +K D + + P+ +N+++D VK DL F
Sbjct: 13 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGG-DLEAGF 71
Query: 68 -YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL---- 122
R +M+ G + + TY +L+ GLC R+ + L+ M S + P+ Y+ L
Sbjct: 72 RLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGL 131
Query: 123 -------------------------------IHSLCKNGKVGRARSLMSDMEE----PND 147
++ LCK+GKV +A ++ + P
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
V ++ LI YC+ +L A + E+ S PD +T ++ LC + V A +++
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV-- 249
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
EME+ G P+V+T+N LI +Y G L+ V +DM+ GI
Sbjct: 250 -----------------MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 292
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
+ +++ ++++ C G+I + + IL M ++ YNS++ ++A
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV--YNSIIDAYIESGDTEQA 350
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+++M+ + V +L + G C +++A+ + +G P+VV Y+ +I A
Sbjct: 351 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 410
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C + +A EL++EM +G P T++T++S L G V L ++ + +
Sbjct: 411 CCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLH---KNV 467
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
P S Y ++ A + L +M KGI D
Sbjct: 468 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 198/438 (45%), Gaps = 27/438 (6%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG---RAR 136
D ++Y +++ GL + + D K+ M GV PN + YNT+I K G + R R
Sbjct: 15 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74
Query: 137 -SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
++ D +PN VT+++L+ C+ + VL+++ S PD T + + + L
Sbjct: 75 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134
Query: 196 GRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTY 239
G + + ES ++G + GKV + L+ + G +P Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI+ YC+ L A +F MK I + +TY+ LI GLC + ++ ME
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME- 253
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K G + +N+++ Q ++ L M++ + + + FC +G +
Sbjct: 254 -KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
+A D MI + PN +Y+ +I AY + +A L+++M G T+N +
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
L GLCR + A +L+ +R +G P Y+ +I A C KG A LL +M
Sbjct: 373 LKGLCRSSQIDEAEELIYT-LR--NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNK 429
Query: 478 KGILPDYLTWNSLLICLS 495
GI P T+++L+ L+
Sbjct: 430 YGIRPTLRTYHTLVSALA 447
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 38/188 (20%)
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P A ++ I G G DA + FD+M++ G VPN + Y+ +I + + + L
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVG------------------------------ 428
+M G P T+N +LSGLCR G +
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 429 -----TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
T L L E ++ +G + G+ S L+ LC+ G A +L +V G++P
Sbjct: 134 TGESRTMLSLFAESLK---KGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPT 190
Query: 484 YLTWNSLL 491
+ +N+L+
Sbjct: 191 TVIYNTLI 198
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 232/504 (46%), Gaps = 34/504 (6%)
Query: 21 LGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQG 79
L +A I D V V ++ P + NS+L +LVK + AR Y +M G
Sbjct: 150 LSKAVEIYDYV-----VELYDSVPDVIACNSLLSLLVKSRRLGDARKVY-DEMCDRGDSV 203
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
D+Y+ IL+KG+C +V G KL+ +G PN V YNT+I CK G + A +
Sbjct: 204 DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVF 263
Query: 140 SDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSV 195
+++ P TF +I +CKE + V + LL + G V + +++
Sbjct: 264 KELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRH 323
Query: 196 GRVMDAVE----ILEESGEQ---------GRL---GKVKGGCRFLKEMERKGCLPNVDTY 239
G +D E I+ + RL GK + FL E +KG +PN +Y
Sbjct: 324 GYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY 383
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
LI +YC++ D A + M G + VTY LI GL G +DD + + + D
Sbjct: 384 APLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLID 443
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNV 357
G + YN ++ GL + + A +M + P A + I GF G+
Sbjct: 444 --RGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
++A++ F +E+G +VV ++ +I +C+ + EA M M +P T++T+
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G +Q ++ TA+K+ + + P Y+ LI C +G F+ A +M
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCK---PNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Query: 478 KGILPDYLTWNSLLICLSQQTTWL 501
+ ++P+ +T+ +L+ L+++++ L
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTL 642
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 212/507 (41%), Gaps = 51/507 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLAR 65
P F T+I G + D V + L+S + S+ N+I+D + +
Sbjct: 273 PTLETFGTMINGFCKE---GDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A ++A+ + D TY IL+ LC + L +G+ PN++ Y LI +
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
CK+ + A L+ M E P+ VT+ ILI ++ +A+ + K G PD
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
++ LC GR + A + E M + LP+ Y
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSE-------------------MLDRNILPDAYVYAT 490
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
LI + +G D A VF+ G+ + V ++ +I+G C G +D+ L + M ++
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM--NE 548
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVED 359
E Y++++ G ++ A++ + MEK P V + I GFC G+ +
Sbjct: 549 EHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKM 608
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE-MTGHGYLPIASTFNTVL 418
A+ F +M VPNVV Y LI + +E E + E M + +P TFN +L
Sbjct: 609 AEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 419 SGLCRQGNVGTALKLVEEDMRGIGRGSL--------------PGSGHYSPLIKALCEKGG 464
G ++ + L E D G+ SL + Y+ + LC G
Sbjct: 669 QGFVKK---TSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGM 725
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
++A M +MV KG PD +++ ++L
Sbjct: 726 VKTACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 195/493 (39%), Gaps = 47/493 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD + + +I L + V D S+ + P+ + ++ K ++ D+A
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G + D TY IL+ GL ++ + D + + RGV P++ IYN L+ LC
Sbjct: 403 LLQ-MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G+ A+ L S+M + P+ ++ LI + + + A + S G DVV
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL-----------GKVK-----GGCRFLKEM 227
+++ C G + +A+ + E+ + G VK + + M
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC-SGGR 286
E+ C PNV TY LI+ +C G A + F +M++ + N VTY TLIR L
Sbjct: 582 EKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESST 641
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
++ + +LM +K +N +L G ++ E P +
Sbjct: 642 LEKAVYYWELMMTNK--CVPNEVTFNCLLQGFVKKTSGKVLAE---------PDGSNH-- 688
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
G F +M +G + Y+ + C V+ A +M G
Sbjct: 689 --------GQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG 740
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ P +F +L G C GN + D +G L + YS +++ +
Sbjct: 741 FSPDPVSFAAILHGFCVVGNSKQWRNM---DFCNLGEKGLEVAVRYSQVLEQHLPQPVIC 797
Query: 467 SASMLLVQMVGKG 479
AS +L MV K
Sbjct: 798 EASTILHAMVEKA 810
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 42/214 (19%)
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G C +G VE ++ + +G +PN+V Y+ +I YC+ + A + KE+ G+
Sbjct: 212 VKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF 271
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRG-------------------------- 440
+P TF T+++G C++G+ + +L+ E RG
Sbjct: 272 MPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAE 331
Query: 441 -----IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--IC 493
I P Y+ LI LC++G + A L + KG++P+ L++ L+ C
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 494 LSQQTTWLLLLLLN--------EMVSFVMVVHEL 519
S++ LLL ++V++ +++H L
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL 425
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 32/348 (9%)
Query: 146 NDVTFSILICAYCKEENLVNALVLL-EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
++ T+ +L+ A+C L A+ LL E G P + LC G+V +A+E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ K M+ C P+V T+N LI+ C+ G LD A V ++M+
Sbjct: 77 V-------------------KNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER 117
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + N VTY+TLI GL S GR + + ++Q M + + YN++++G + +
Sbjct: 118 SGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPD-----TQTYNAIIHGFCKSGEI 172
Query: 325 DEA---LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI-EEGGVPNVVIYD 380
D A LE +KQ P S+ I G C N+ A +MI + +VV ++
Sbjct: 173 DRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFN 232
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ YC+ + + A EL+ M HG P T++T++ GLCR G+V L+E +
Sbjct: 233 TLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE---KM 289
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+ RG P Y+ L+ LC+ G A L+ +M+ G P+ +T++
Sbjct: 290 VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 31/352 (8%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSL 138
D+YTY +L++ CL + LL M+ + G+ P +YN +H+LCK+GKV A +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 139 MSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+ +M++ P+ VTF+ LI CK L A +L++ GF ++VT ++ L S
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
GR +AV + M+ P+ TYN +I +C++G +D
Sbjct: 137 AGRSGEAVLV----------------------MQGMTTTPDTQTYNAIIHGFCKSGEIDR 174
Query: 255 ALDVFNDMKI-DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A +MK G S + TY LI GLC + ++LQ M K+ ++ +N+
Sbjct: 175 AYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVA-FNT 233
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + D A E L M P V S I G C G+V+ ++M+ G
Sbjct: 234 LVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG 293
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
P+VV Y L+ C+ ++ EA L+K M G P A T++ V GLC+
Sbjct: 294 CKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 9/285 (3%)
Query: 215 GKVKGGCRFLKEMERK-GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
G+++ L+EME++ G P YN + + C++G + A++V +MK + VT
Sbjct: 32 GELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVT 91
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
++TLI GLC GR+D+ ++L ME S G + YN+++ GL + EA+ ++
Sbjct: 92 FNTLIAGLCKAGRLDEAQQVLDEMERS--GFAANLVTYNTLINGLSSAGRSGEAVLVMQG 149
Query: 334 MEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERV 392
M P + I GFC G ++ A ++M + G P+ Y LI+ C+ +
Sbjct: 150 MTTT-PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208
Query: 393 REASELMKEMTGH-GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
R+A EL++EM G FNT++ G C+ ++ A +L+ + G P
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE---HGCAPDVVT 265
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
YS +I LC G LL +MV +G PD +T+ L+ L +
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 140/307 (45%), Gaps = 33/307 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL +A +++ + D + R +L +N++++ L
Sbjct: 87 PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV 146
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSLC 127
+ M + D TY ++ G C + + + L MK R G P++ Y+ LI+ LC
Sbjct: 147 MQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLC 203
Query: 128 KNGKVGRARSLMSDMEEPND-----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K+ + +A L+ +M D V F+ L+ YCK ++L A LL G PDV
Sbjct: 204 KSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT + +++ LC R G V G L++M +GC P+V TY +L
Sbjct: 264 VTYSTIIDGLC-------------------RCGDVDKGFALLEKMVSRGCKPDVVTYTVL 304
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
++ C+ G + A + M DG + N VTY + GLC ++D +L + D
Sbjct: 305 VTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD--- 361
Query: 303 GSKGRIS 309
KGRI+
Sbjct: 362 --KGRIT 366
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 155/348 (44%), Gaps = 29/348 (8%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++ A R+ G+ Y + LC + +V + +++ MK KP+ V +
Sbjct: 33 ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTF 92
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NTLI LCK G++ A+ ++ +ME N VT++ LI A+++++
Sbjct: 93 NTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ---G 149
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK--------VKGGCR----- 222
PD T ++ C G + A LEE ++ + G C+
Sbjct: 150 MTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLR 209
Query: 223 ----FLKEM-ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
L+EM RK C +V +N L+ YC+ LD A ++ + M G + + VTY T+
Sbjct: 210 KADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTI 269
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
I GLC G +D G +L+ M G K + Y ++ GL + + EA +K+M +
Sbjct: 270 IDGLCRCGDVDKGFALLEKM--VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
P AV SL G C ++ A + ++G + +VV ++ L+
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRA---RMINDVVKATDLVSRFNMTPSLKIFNSILDVLV 57
M PD + +I GL ++ R +++++ +++ R + S+ FN+++D
Sbjct: 182 MKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ--EMIGRKDCCASVVAFNTLVDGYC 239
Query: 58 K-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
K +D+D AR M+ G D TY+ ++ GLC V GF LL M SRG KP+
Sbjct: 240 KAQDLDRARELL-SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDV 298
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK 172
V Y L+ LCK GK+ A L+ M E PN VT+S++ CK + L A LL
Sbjct: 299 VTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS 358
Query: 173 SFSFGFVPDVVTITKVL 189
G + DVV +L
Sbjct: 359 IRDKGRITDVVAFEALL 375
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 379 YDCLIHAYCQEERVREASELMKEMTGH-GYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y L+ A+C ++ A +L++EM G P S +N + LC+ G V A+++V+
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
G + P ++ LI LC+ G A +L +M G + +T+N+L+ LS
Sbjct: 81 KDGACK---PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 215/452 (47%), Gaps = 33/452 (7%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFN--MTPSLKIFNSILDVLVKEDIDLARAFY 68
E+ + V+ GL A M N +A +LV + TP++ I+N I+ L + +
Sbjct: 54 ETTYKLVVDGLCGAGMAN---QALELVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKV 110
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM+ + + +TY IL+ GLC +N+ ++ MK G KPN + Y TLI L +
Sbjct: 111 LEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSR 170
Query: 129 NGKVGRARSLMSD---MEEPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A +M + +E P DV T + ++ CK L +AL +E+ G P+ VT
Sbjct: 171 AGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVT 230
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-----------------RLGKVKGGCRFLKEM 227
+ ++ G + + EE + + G + + ++E+
Sbjct: 231 YSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEEL 290
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G +P+V TY++LI+++ G D++L++ DM+ +G+ + VTY TLI LC +
Sbjct: 291 RQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKF 350
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRS 345
D ++L+LME + GS + YNSV+ GL + + DE + M + P V S
Sbjct: 351 QDAFRLLELMEAA--GSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYS 408
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK--EMT 403
+ + G G ++ A + F+ + P+ Y +I + C+ ++ EA + E+T
Sbjct: 409 IIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVT 468
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
G I +++ LC +A ++VE
Sbjct: 469 VAGD-NICRALAGLVAALCDAKRTDSARRIVE 499
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 202/446 (45%), Gaps = 42/446 (9%)
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+A + ++ +G + D + +L L ++ + +L ++ SRGV Y +
Sbjct: 1 MAAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLV 60
Query: 123 IHSLCKNGKVGRARSLMSDME---EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ LC G +A L+ ++ P ++ +I C+ +++A +LEK V
Sbjct: 61 VDGLCGAGMANQALELVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
P+V T T +L LC R K K +EM+R GC PN TY
Sbjct: 121 PNVFTYTILLNGLC-------------------RSNKTKLAREVFQEMKRNGCKPNPITY 161
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
LI G +D AL V + + + + +T T++ GLC R+DD LK ++ M
Sbjct: 162 GTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMR- 220
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME---------KLFPRAVDRSLKILG 350
+ G + Y+++++G + + D + + ++ + +P +D
Sbjct: 221 -QMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLD------A 273
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
C G ++ A++ +++ + G VP+VV Y LI+ + + + + EL+++M +G P
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T++T+++ LC++ A +L+E M GS P Y+ ++ LC+ G
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLEL-MEAA--GSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQ 496
+ M+ PD +T++ ++ LS+
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSK 416
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 143/306 (46%), Gaps = 24/306 (7%)
Query: 3 HSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DI 61
S++ P D T++ GL +A ++D +K + + + + P+ +++++ + ++
Sbjct: 185 RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGEL 244
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
D F+ ++ G + Y + LC + K + ++ GV P+ V Y+
Sbjct: 245 DRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSM 304
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LI++ + G+ + L+ DM +P+ VT+S LI CKE +A LLE + G
Sbjct: 305 LINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAG 364
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P+VVT V++ LC G+ MD V R + M + C P+V
Sbjct: 365 SPPNVVTYNSVMDGLCKSGK-MDEVH------------------RVYEMMLKSRCSPDVV 405
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+I+++ + G+LDSA+ +F +K + Y +I LC G++++ + M
Sbjct: 406 TYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGM 465
Query: 298 EDSKEG 303
E + G
Sbjct: 466 EVTVAG 471
>gi|26449752|dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
Length = 593
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 210/472 (44%), Gaps = 42/472 (8%)
Query: 48 IFNSILDVLVKEDIDLARAFYRKKMMASGVQGDD--YTYAILMKGLCLTNRVGDGFKLLH 105
IFN +LD ++K +D + A DD ++ +M+ LCL ++ L
Sbjct: 87 IFN-VLDYILKSSLDRLASLRESVCQAKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRK 145
Query: 106 VMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEE 161
M GV P + +N L++ LCK G + +A L+ +M E PN V+++ LI C
Sbjct: 146 KMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVN 205
Query: 162 NLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA-----VEILEESGEQGRL-- 214
N+ AL L +G P+ VT ++ LC G + + EIL+ S L
Sbjct: 206 NVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265
Query: 215 -------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
G V KEM +K + YN++I C +G + +A D
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYG 317
M G++ + TY+TLI LC G+ D+ + M++ G ++P Y ++ G
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN------GGVAPDQISYKVIIQG 379
Query: 318 LYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
L + A E+L M K P + ++ I G+ G+ A + M+ G PN
Sbjct: 380 LCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPN 439
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
V + LIH Y + R+ +A + EM P +T+N +L C G++ A +L +
Sbjct: 440 VYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYD 499
Query: 436 EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
E +R RG P Y+ L++ LC KG + A LL ++ GI D++ +
Sbjct: 500 EMLR---RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 11/283 (3%)
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
GK+ K+M G +P + T+N L++ C+ G ++ A + +M+ G S N V+Y
Sbjct: 135 GKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSY 194
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE-----NQQDEALE 329
+TLI+GLCS +D L + M +K G + N +++ L ++ N + E
Sbjct: 195 NTLIKGLCSVNNVDKALYLFNTM--NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 330 YLKQMEKLFPRAVDRSLKILGFCV-DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
L + P + ++ C +GNV A + +M ++ + V+Y+ +I C
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ A M +M G P T+NT++S LC++G A L G G P
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG---GVAPD 369
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y +I+ LC G A+ L+ M+ +LP+ L WN ++
Sbjct: 370 QISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 26/277 (9%)
Query: 29 DVVKATDL---VSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 85
+VV+A ++ +S+ N+ ++N I+ L +A + M+ GV D +TY
Sbjct: 280 NVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYN 339
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
L+ LC + + L M++ GV P+ + Y +I LC +G V RA + M +
Sbjct: 340 TLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKS 399
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P + ++++I Y + + +AL +L S+G P+V T ++ GR++DA
Sbjct: 400 SLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDA 459
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ E M P+ TYN+L+ + C G L A ++++
Sbjct: 460 WWVKNE-------------------MRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDE 500
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
M G + +TY L+RGLC GR+ +L ++
Sbjct: 501 MLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ VI G GR + + +L+ + + P++ N+++ VK + +
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ +M ++ + D TY +L+ C + F+L M RG +P+ + Y L+ LC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFS 175
G++ +A SL+S ++ + V F IL Y + + A ++ +K +
Sbjct: 523 KGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLA 573
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 169/370 (45%), Gaps = 58/370 (15%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
P + + +I++ L K +A A KKM +G Q D TY+ ++ LC RV + +
Sbjct: 8 PDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDI 67
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
MK++G+ PN YN+LI LC + A +++++M PN VTFS+LI +CK
Sbjct: 68 FSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCK 127
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
E N+ A +L+ G P+VVT + +M+ + E E +L V
Sbjct: 128 EGNVFEARGVLKTMTEMGVEPNVVTYSS----------LMNGYSLQAEVFEARKLFDV-- 175
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
M KGC P+V +YNILI+ YC+ + A +FN+M G++ + V+Y+TLI
Sbjct: 176 -------MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID 228
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFP 339
GLC GR+ + + + M + P
Sbjct: 229 GLCQLGRLREAHDLFKNMLTNGN-----------------------------------LP 253
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
S+ + GFC G + A R F M PN+V+Y+ LI A C+ ++EA +L
Sbjct: 254 DLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLF 313
Query: 400 KEMTGHGYLP 409
E+ G P
Sbjct: 314 SELFVQGLQP 323
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 156/317 (49%), Gaps = 26/317 (8%)
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G+ PDV T T ++ LC +G + A + ++ GE GC P+V
Sbjct: 5 GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGE-------------------AGCQPDV 45
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY+ +I S C+ ++ ALD+F+ MK GIS N TY++LI+GLC+ R + +L
Sbjct: 46 VTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLN- 104
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVD 354
E I ++ ++ +E EA LK M ++ P V S + G+ +
Sbjct: 105 -EMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 163
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
V +A++ FD MI +G P+V Y+ LI+ YC+ +R+ EA +L EM G P ++
Sbjct: 164 AEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 223
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT++ GLC+ G + A L + + G+LP YS L+ C++G A L
Sbjct: 224 NTLIDGLCQLGRLREAHDLFKNMLTN---GNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 280
Query: 475 MVGKGILPDYLTWNSLL 491
M + P+ + +N L+
Sbjct: 281 MQSTYLKPNMVMYNILI 297
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 164/347 (47%), Gaps = 28/347 (8%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+P+ T++ +I CK V A L +K G PDVVT + +++ LC RV +A++
Sbjct: 7 QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
I M+ KG PN+ TYN LI C A + N+M
Sbjct: 67 IFSY-------------------MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMM 107
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
I N VT+ LI C G + + +L+ M ++ G + + Y+S++ G + +
Sbjct: 108 SLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM--TEMGVEPNVVTYSSLMNGYSLQAE 165
Query: 324 QDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
EA + M + P ++ I G+C + +AK+ F++MI +G P++V Y+
Sbjct: 166 VFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNT 225
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI CQ R+REA +L K M +G LP T++ +L G C+QG + A +L R +
Sbjct: 226 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRL----FRAM 281
Query: 442 GRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
L P Y+ LI A+C+ + A L ++ +G+ P+ W
Sbjct: 282 QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 131/267 (49%), Gaps = 7/267 (2%)
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M +G P+V TY +I+ C+ G +A +F M G + VTY T+I LC R
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDR 344
+++ L I M+ +G I YNS++ GL ++ EA L +M L P V
Sbjct: 61 VNEALDIFSYMK--AKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL I FC +GNV +A+ M E G PNVV Y L++ Y + V EA +L M
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G P ++N +++G C+ +G A +L E I +G P Y+ LI LC+ G
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNE---MIHQGLTPDIVSYNTLIDGLCQLGR 235
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A L M+ G LPD T++ LL
Sbjct: 236 LREAHDLFKNMLTNGNLPDLCTYSILL 262
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 23/290 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I L + R +N+ + + ++P++ +NS++ L +
Sbjct: 43 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 102
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+MM+ + + T+++L+ C V + +L M GV+PN V Y++L++
Sbjct: 103 LNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL 162
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+V AR L M +P+ +++ILI YCK + + A L + G PD+V+
Sbjct: 163 QAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVS 222
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ LC +GR+ +A ++ K M G LP++ TY+IL+
Sbjct: 223 YNTLIDGLCQLGRLREAHDL-------------------FKNMLTNGNLPDLCTYSILLD 263
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
+C+ G L A +F M+ + N V Y+ LI +C + + K+
Sbjct: 264 GFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLF 313
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALC 460
M GY P T+ T+++GLC+ G A L ++ +G G P YS +I +LC
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKK----MGEAGCQPDVVTYSTIIDSLC 56
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
+ A + M KGI P+ T+NSL+ L + W +LNEM+S
Sbjct: 57 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS 108
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 176/360 (48%), Gaps = 28/360 (7%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG--VKPNSVIYNTLIHSLCKNGKVGRARS 137
D ++Y IL+ GLC NR + +LLH+M G P+ V Y+T+I+ K G + +
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK--- 106
Query: 138 LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
++ PN VT++ +I A CK + + A+ +L G +PD +T ++ CS G+
Sbjct: 107 MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQ 166
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
+A+ FLK+M G P+V TYN L+ C+ G A
Sbjct: 167 PKEAI-------------------VFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+F+ M G+ + TY TL++G + G + + +L LM + G ++ ++
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLM--VRNGIHPNHYVFSILVCA 265
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
++ + +EA+ +M + L P AV I C G VEDA F+QMI+EG P+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE 435
++Y+ LIH+ C ++ +A EL EM G FN+++ C++G V + KL +
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 171/388 (44%), Gaps = 71/388 (18%)
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE------PNDVTFSILICAYCKEENL 163
RG+ P+ YN L++ LC + A L+ M + P+ V++S +I + KE +L
Sbjct: 46 RGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
+L++ S P+VVT ++ LC V A+E+L
Sbjct: 105 DK---MLDQRIS----PNVVTYNSIIAALCKAQTVDKAMEVL------------------ 139
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
M + G +P+ TYN ++ +C +G A+ M+ DG+ + VTY++L+ LC
Sbjct: 140 -TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 198
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD 343
GR + KI M +K G K I+ Y ++L G
Sbjct: 199 NGRCTEARKIFDSM--TKRGLKPDITTYGTLLQG-------------------------- 230
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ G + + D M+ G PN ++ L+ AY ++E+V EA + +M
Sbjct: 231 -------YATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P A T+ TV+ LC+ G V A+ E+ I G P S Y+ LI +LC
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQ---MIDEGLRPDSIVYNSLIHSLCIFD 340
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL 491
++ A L ++M+ +GI + +NS++
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSII 368
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 67/330 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARA 66
PPD + TVI G + D+ K D ++P++ +NSI+ L K + +D A
Sbjct: 85 PPDVVSYSTVINGFFKE---GDLDKMLDQ----RISPNVVTYNSIIAALCKAQTVDKAME 137
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
M+ SGV D TY ++ G C + + + L M+S GV+P+ V YN+L+ L
Sbjct: 138 VL-TTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYL 196
Query: 127 CKNGKVGRARSLMSDMEE---------------------------------------PND 147
CKNG+ AR + M + PN
Sbjct: 197 CKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNH 256
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
FSIL+CAY K+E + A+++ K G P+ VT V+++LC GRV DA+
Sbjct: 257 YVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAM----- 311
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
+ ++M +G P+ YN LI S C + A ++F +M GI
Sbjct: 312 --------------LYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
+ + ++++I C GR+ + K+ LM
Sbjct: 358 CLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + + T+++G + ++ DL+ R + P+ +F+ ++ K++
Sbjct: 219 PDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 278
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM G+ + TY ++ LC + RV D M G++P+S++YN+LIHSLC
Sbjct: 279 FSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCI 338
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K +A L +M + + + F+ +I ++CKE ++ + L + G PD++T
Sbjct: 339 FDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Query: 185 ITK 187
+ +
Sbjct: 399 LGR 401
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 15/152 (9%)
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG--YLPIASTFN 415
EDA+ FD+++ G +P+V Y+ L++ C E R +EA EL+ M G P +++
Sbjct: 34 EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
TV++G ++G++ K++++ + P Y+ +I ALC+ A +L M
Sbjct: 93 TVINGFFKEGDLD---KMLDQRIS-------PNVVTYNSIIAALCKAQTVDKAMEVLTTM 142
Query: 476 VGKGILPDYLTWNSLL--ICLSQQTTWLLLLL 505
V G++PD +T+NS++ C S Q ++ L
Sbjct: 143 VKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFL 174
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 223/500 (44%), Gaps = 46/500 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKED--IDLAR 65
P + F +I A ++ V A + + F P+ ++N++L VLV + LA
Sbjct: 135 PPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLAL 194
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A Y +M+A+G + TY +LM GLC D KL M RG+ PN + L+ S
Sbjct: 195 ALY-NRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSS 253
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFG-FVP 180
+C G++ A +L++ ME+ P++VT++ + CK + A+ LE G FV
Sbjct: 254 MCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVL 313
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRL-----------------GKVKGGCRF 223
+ + +++ L GR + + E EQ G++ F
Sbjct: 314 GLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAF 373
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
EM+ K P+ YN L+ + C++G LD A + ++M + + + T+ +I GLC
Sbjct: 374 FDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCK 433
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-----KLF 338
+D+ +++ M + G + YN ++ GLYR ++ +EA +ME LF
Sbjct: 434 KQLVDEAMQVFDGMVEV--GCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLF 491
Query: 339 PRAV--------DRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
R SL+ L C G V A + +++ G VP+VV Y+ L++ C+
Sbjct: 492 LRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCK 551
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
+ A L +E+ G+ T+ T++ L R A+ L ++ + G P
Sbjct: 552 VRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILH---IGGTPS 608
Query: 449 SGHYSPLIKALCEKGGFQSA 468
Y+ ++++LC A
Sbjct: 609 LSIYNSIMRSLCRMNKLSQA 628
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 202/473 (42%), Gaps = 43/473 (9%)
Query: 42 MTPSLKI----FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRV 97
+TP L+ +++ +L+ D D A A+G+Q + L+ R
Sbjct: 94 LTPRLRSPLLHSRAVVPILLATDADAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRH 153
Query: 98 GDGFKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKV-GRARSLMSDMEE----PNDVTFS 151
+ M+ G +P + +YN ++ L +G V A +L + M PN T++
Sbjct: 154 HEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYN 213
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
+L+ CK V+AL L ++ G P+V T T +L +C+
Sbjct: 214 VLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNA---------------- 257
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG-ISWN 270
G++K L ME KGC P+ TYN +S C+ G +D A++ ++ G
Sbjct: 258 ---GQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLG 314
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
Y LI GL GR ++G + + + + S I Y ++ G + D+A +
Sbjct: 315 LKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPD-IVLYTIMIRGCAEAGRIDDAFAF 373
Query: 331 LKQM-EKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
+M EK F P + + C G+++ A+ +M + V + + +IH C+
Sbjct: 374 FDEMKEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCK 433
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG-------- 440
++ V EA ++ M G P T+N ++ GL R + A L + G
Sbjct: 434 KQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLR 493
Query: 441 --IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G + S L+ ++C+ G A LL ++ G++PD +T+N+LL
Sbjct: 494 LTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLL 546
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 208/465 (44%), Gaps = 40/465 (8%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRF-NMTPSLKIFNSILD-VLVKEDIDLAR 65
PPDE + + GL +A +++ ++ + + R LK ++ ++D + + +
Sbjct: 276 PPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGF 335
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
Y + + + D Y I+++G R+ D F MK + P++ YNTL+ +
Sbjct: 336 QCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKA 395
Query: 126 LCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
LC +G + ARSLMS+M + N V T +I+I CK++ + A+ + + G P
Sbjct: 396 LCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPT 455
Query: 182 VVTITKVLELLCSVGRVMDAVEILE--ESGEQGRL------------------------- 214
V+T +++ L R+ +A + E G L
Sbjct: 456 VMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMC 515
Query: 215 --GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
G+V + L+ + G +P+V TYN L++ C+ LD AL +F ++++ G S + +
Sbjct: 516 QSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEI 575
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL- 331
TY TLI L R +D + + Q + G +S YNS++ L R N+ +A+ +
Sbjct: 576 TYGTLIDSLLRAHRYNDAMTLFQ--DILHIGGTPSLSIYNSIMRSLCRMNKLSQAINFWF 633
Query: 332 -KQMEKLFPRAVDRSL-KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
++K A D + +G++++A R ++ +E G N Y + Q
Sbjct: 634 DHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQA 693
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
R+ +A ++ + G + + LC + N+ +A+ ++
Sbjct: 694 RRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVM 738
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 109/281 (38%), Gaps = 41/281 (14%)
Query: 253 DSAL-DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
D+A+ D D + G+ ++ LI S GR + + ME + G + Y
Sbjct: 118 DAAMYDAIADAQAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRME-GEFGCRPTTFVY 176
Query: 312 NSVLYGLYRENQQDE-ALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
N+VL L AL +M P ++ + G C G DA + FD+M+
Sbjct: 177 NAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEML 236
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ G PNV + L+ + C +++EA L+ M G P T+N LSGLC+ G V
Sbjct: 237 QRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVD 296
Query: 429 TALKLVEEDMRGIGRGSLPGSGH-----------------------------------YS 453
A++ +E +R G L G+ Y+
Sbjct: 297 EAIERLEA-LRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYT 355
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+I+ E G A +M K PD +N+LL L
Sbjct: 356 IMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKAL 396
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 32/348 (9%)
Query: 146 NDVTFSILICAYCKEENLVNALVLL-EKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
++ T+ +L+ A+C L A+ LL E G P + LC G+V +A+E+
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ K M+ C P+V T+N LI+ C+ G LD A V ++M+
Sbjct: 77 V-------------------KNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER 117
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G + N VTY+TLI GL S GR + + ++Q M + + YN++++G + +
Sbjct: 118 SGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTTPD-----TQTYNAIIHGFCKSGEI 172
Query: 325 DEA---LEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI-EEGGVPNVVIYD 380
D A LE +KQ P S+ I G C N+ A +MI + +VV ++
Sbjct: 173 DRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFN 232
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L+ YC+ + + A EL+ M HG P T++T++ GLCR G+V L+E +
Sbjct: 233 TLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLE---KM 289
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
+ RG P Y+ L+ LC+ G A L+ +M+ G P+ +T++
Sbjct: 290 VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYS 337
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 31/352 (8%)
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSL 138
D+YTY +L++ CL + LL M+ + G+ P +YN +H+LCK+GKV A +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 139 MSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCS 194
+ +M++ P+ VTF+ LI CK L A +L++ GF ++VT ++ L S
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 195 VGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
GR +AV + M+ P+ TYN +I +C++G +D
Sbjct: 137 AGRSGEAVLV----------------------MQGMTTTPDTQTYNAIIHGFCKSGEIDR 174
Query: 255 ALDVFNDMKI-DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A +MK G S + TY LI GLC + ++LQ M K+ ++ +N+
Sbjct: 175 AYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVA-FNT 233
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
++ G + D A E L M P V S I G C G+V+ ++M+ G
Sbjct: 234 LVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRG 293
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
P+VV Y L+ C+ ++ EA L+K M G P A T++ V GLC+
Sbjct: 294 CKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%), Gaps = 9/285 (3%)
Query: 215 GKVKGGCRFLKEMERK-GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVT 273
G+++ L+EME++ G P YN + + C++G + A++V +MK + VT
Sbjct: 32 GELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVT 91
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
++TLI GLC GR+D+ ++L ME S G + YN+++ GL + EA+ ++
Sbjct: 92 FNTLIAGLCKAGRLDEAQQVLDEMERS--GFAANLVTYNTLINGLSSAGRSGEAVLVMQG 149
Query: 334 MEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERV 392
M P + I GFC G ++ A ++M + G P+ Y LI+ C+ +
Sbjct: 150 MTTT-PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNL 208
Query: 393 REASELMKEMTGH-GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
R+A EL++EM G FNT++ G C+ ++ A +L+ + G P
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE---HGCAPDVVT 265
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
YS +I LC G LL +MV +G PD +T+ L+ L +
Sbjct: 266 YSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 33/307 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL +A +++ + D + R +L +N++++ L
Sbjct: 87 PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV 146
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSR-GVKPNSVIYNTLIHSLC 127
+ M + D TY ++ G C + + + L MK R G P++ Y+ LI+ LC
Sbjct: 147 MQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLC 203
Query: 128 KNGKVGRARSLMSDMEEPND-----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K+ + +A L+ +M D V F+ L+ YCK ++L A LL G PDV
Sbjct: 204 KSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDV 263
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT + +++ LC R G V G L++M +GC P+V TY +L
Sbjct: 264 VTYSTIIDGLC-------------------RCGDVDKGFALLEKMVSRGCKPDVVTYTVL 304
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
++ C+ G + A + M DG + N VTY + GLC ++D +L + D
Sbjct: 305 VTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD--- 361
Query: 303 GSKGRIS 309
KGR++
Sbjct: 362 --KGRVT 366
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 155/348 (44%), Gaps = 29/348 (8%)
Query: 60 DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIY 119
++ A R+ G+ Y + LC + +V + +++ MK KP+ V +
Sbjct: 33 ELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTF 92
Query: 120 NTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFS 175
NTLI LCK G++ A+ ++ +ME N VT++ LI A+++++
Sbjct: 93 NTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ---G 149
Query: 176 FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK--------VKGGCR----- 222
PD T ++ C G + A LEE ++ + G C+
Sbjct: 150 MTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLR 209
Query: 223 ----FLKEM-ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
L+EM RK C +V +N L+ YC+ LD A ++ + M G + + VTY T+
Sbjct: 210 KADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTI 269
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
I GLC G +D G +L+ M G K + Y ++ GL + + EA +K+M +
Sbjct: 270 IDGLCRCGDVDKGFALLEKM--VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
P AV SL G C ++ A + ++G V +VV ++ L+
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRA---RMINDVVKATDLVSRFNMTPSLKIFNSILDVLV 57
M PD + +I GL ++ R +++++ +++ R + S+ FN+++D
Sbjct: 182 MKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQ--EMIGRKDCCASVVAFNTLVDGYC 239
Query: 58 K-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
K +D+D AR M+ G D TY+ ++ GLC V GF LL M SRG KP+
Sbjct: 240 KAQDLDRARELL-SSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDV 298
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEK 172
V Y L+ LCK GK+ A L+ M E PN VT+S++ CK + L A LL
Sbjct: 299 VTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTS 358
Query: 173 SFSFGFVPDVVTITKVL 189
G V DVV +L
Sbjct: 359 IRDKGRVTDVVAFETLL 375
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 379 YDCLIHAYCQEERVREASELMKEMTGH-GYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y L+ A+C ++ A +L++EM G P S +N + LC+ G V A+++V+
Sbjct: 21 YFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNM 80
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 495
G + P ++ LI LC+ G A +L +M G + +T+N+L+ LS
Sbjct: 81 KDGACK---PDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLS 135
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 197/443 (44%), Gaps = 30/443 (6%)
Query: 39 RFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVG 98
RF S+ N++LDV + K +A+ + D T+ +L+ G CL
Sbjct: 112 RFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPE 171
Query: 99 DGFKLLHVMKSR-GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDV---TFSILI 154
+ F ++ M+ GV P+ +N ++H LCK+GKV A + V TFSILI
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILI 231
Query: 155 CAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL 214
K ++ A L +++ + G D+ T T ++ L ++ +AV ++E+
Sbjct: 232 NGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEK------- 284
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTY 274
+ GC P + TYN L++ C+ G L+ A+D+ + +G + + VTY
Sbjct: 285 ------------ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTY 332
Query: 275 DTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
+LI GL R + K+ + M + G Y +++ GL + + +A K M
Sbjct: 333 TSLIDGLGKEKRSFEAYKLFKEM--ASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390
Query: 335 EK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
P V S I G G + A R F M G PN V+Y LIH C+ ++
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHY 452
A E++ +M P T+N ++ GLC+ G+V A +E + G P Y
Sbjct: 451 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA---GCKPDVYTY 507
Query: 453 SPLIKALCEKGGFQSASMLLVQM 475
+ LI LC+ G +A +L M
Sbjct: 508 NILISGLCKAGNTDAACGVLDDM 530
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 195/433 (45%), Gaps = 42/433 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-----EDIDLA 64
D + ++ L + + I + V + ++ TP++ +N++L+ L K E IDL
Sbjct: 258 DIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 317
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
R K++ +G D TY L+ GL R + +KL M SRG+ ++V Y LI
Sbjct: 318 R-----KIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIR 372
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L + GK+ +A S+ M P+ VT S +I K + A+ + + + G P
Sbjct: 373 GLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 432
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFL 224
+ V + ++ LC ++ A+E+L + + + G V+ F
Sbjct: 433 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 492
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EM GC P+V TYNILIS C+ G D+A V +DM S FV Y +L+ GLC
Sbjct: 493 DEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMS----SSRFV-YSSLVDGLCKS 547
Query: 285 GRIDDGLKILQLMEDSK-EGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPRAV 342
G+++ G + ME S S+ R +++ L + N+ DEA+ + K P
Sbjct: 548 GKLEGGCMLFHEMERSGVANSQTR----TRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY 603
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I G V + + + +M P+ V Y+ L++ R+ A EM
Sbjct: 604 AYNSIISALIKSGKVNEGQAVYQEMTRWWK-PDRVTYNALLNGMIGANRMDRAHYYYLEM 662
Query: 403 TGHGYLPIASTFN 415
TG GY+P S +
Sbjct: 663 TGRGYVPPVSILH 675
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 23/365 (6%)
Query: 145 PNDVTFSILICAYCKEENLVNAL-VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ T+++LI YC A V+ E FG P + T VL LC G+V+ A++
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211
Query: 204 ILEESGEQGRL----------GKVKGGC-----RFLKEMERKGCLPNVDTYNILISSYCE 248
E + G VK G +E GC ++ TY +++ +
Sbjct: 212 HFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAK 271
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+ A+ + + +G + TY+ L+ GLC GR+++ + +L+ + D+ G +
Sbjct: 272 NKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN--GCTPDV 329
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
Y S++ GL +E + EA + K+M L V + I G G + A +
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M G VP+VV +I + R+ A + K M G P ++ ++ GLC+
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL+++ + + P + Y+ LI LC+ G ++A +M+ G PD T
Sbjct: 450 MDCALEMLAQMKKAF---CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 506
Query: 487 WNSLL 491
+N L+
Sbjct: 507 YNILI 511
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLF---PRAVDRSLKILGFCVDGNVEDAKRCF 364
+ +N ++ G + +EA +++ME+ F P +L + G C G V A F
Sbjct: 154 VETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF 213
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ + V + + LI+ + + +A L +E T +G T+ +++ L +
Sbjct: 214 EAVRRSMPV-SAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKN 272
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A+ L+E + G P Y+ L+ LC+ G + A LL ++V G PD
Sbjct: 273 KKIQEAVALME---KITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329
Query: 485 LTWNSLLICLSQQT-TWLLLLLLNEMVS 511
+T+ SL+ L ++ ++ L EM S
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMAS 357
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 228/505 (45%), Gaps = 50/505 (9%)
Query: 32 KATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGL 91
+A L+ N P + ++ L + + + +M A+ + TY+ L+ G
Sbjct: 288 EALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPND 147
++G ++L++M G P+ I+N+L+H+ C +G A L+ M P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGY 407
Query: 148 VTFSILICAYCKEENLVNA--LVLLEKSFS----FGFVPDVVTITKVLELLCSVGRVMDA 201
V ++ILI + C +++ ++ L L EK++S G V + + ++ LCS G+ A
Sbjct: 408 VVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 202 VEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
++ E QG + K++ +EM+R G + +V TY I++ S
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+++ A FN+M+ G + N VTY LI ++ ++ + M EG
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM--LSEGCL 585
Query: 306 GRISPYNSVLYGLYRENQQDEALE----------------YLKQME---KLFPRAVDRSL 346
I Y++++ G + Q ++A + Y KQ + P V
Sbjct: 586 PNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGA 645
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ GFC VE+A++ D M EG PN ++YD LI C+ ++ EA E+ EM+ HG
Sbjct: 646 LLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHG 705
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+ T+++++ + A K++ + + P Y+ +I LC+ G
Sbjct: 706 FPATLYTYSSLIDRYFKVKRQDLASKVLS---KMLENSCAPNVVIYTEMIDGLCKVGKTD 762
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A L+ M KG P+ +T+ +++
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMI 787
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 217/465 (46%), Gaps = 28/465 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ G D TY+ ++ LC +++ F L MK G+ + Y ++ S CK
Sbjct: 472 REMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + +AR ++M E PN VT++ LI AY K + + A L E S G +P++VT
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGC-LPNVDTYNILIS 244
+ +++ C G++ A +I E + V + K+ + PNV Y L+
Sbjct: 592 SALIDGHCKAGQMEKACQIFERMCGSKDVPDVD---MYFKQYDDDNSERPNVVIYGALLD 648
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
+C+ ++ A + + M ++G N + YD LI GLC G++D+ ++ M S+ G
Sbjct: 649 GFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEM--SEHGF 706
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ Y+S++ ++ +QD A + L +M P V + I G C G ++A +
Sbjct: 707 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 766
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
M E+G PNVV Y +I + + ++ EL++ M G P T+ ++ C
Sbjct: 767 LMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 826
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPG-SGHYSPLIKALCEKGGFQS---ASMLLVQMVGK 478
+ G + A L+EE + + P + Y +I+ GF S+ L+ +G+
Sbjct: 827 KNGALDVAHNLLEE----MKQTHWPTHAAGYRKVIE------GFNKEFIESLGLLDEIGQ 876
Query: 479 GILPDYLTWNSLLI--CLSQQTTWLLLLLLNEMVSFVMVVHELSA 521
+L+ LL+ + Q + L LL E+ +F + + S+
Sbjct: 877 DDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSS 921
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 206/478 (43%), Gaps = 50/478 (10%)
Query: 40 FNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGD 99
F PS +N ++ +K D + + ++M + ++ D +T LC +VG
Sbjct: 229 FRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLC---KVGK 285
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILIC 155
+ L +M++ P++V Y LI LC+ A ++ M PN VT+S L+C
Sbjct: 286 WREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLC 345
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
++ L +L G P ++ C+ SG+
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCT-------------SGDHSYAY 392
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYC------ETGVLDSALDVFNDMKIDGISW 269
K+ LK+M + G P YNILI S C +L+ A +++M G+
Sbjct: 393 KL------LKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVL 446
Query: 270 NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALE 329
N + + R LCS G+ + +++ M +G S Y+ VL L ++ + A
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREM--IGQGFIPDTSTYSKVLGYLCNASKMELAFL 504
Query: 330 YLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYC 387
++M++ L ++ + FC G +E A++ F++M E G PNVV Y LIHAY
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 388 QEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE-----EDMRGI- 441
+ ++V A+EL + M G LP T++ ++ G C+ G + A ++ E +D+ +
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVD 624
Query: 442 --------GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y L+ C+ + A LL M +G P+ + +++L+
Sbjct: 625 MYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALI 682
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 169/366 (46%), Gaps = 43/366 (11%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y L+ G C +RV + KLL M G +PN ++Y+ LI LCK GK+ A+ + ++M
Sbjct: 643 YGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702
Query: 144 E---PNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P + T+S LI Y K + A +L K P+VV T++++ LC VG+
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A ++++ ME KGC PNV TY +I + G +++ L++
Sbjct: 763 EAYKLMQM-------------------MEEKGCQPNVVTYTAMIDGFGRIGKIETCLELL 803
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS-----KEGSKGRISPYNSV 314
M G++ N+VTY LI C G +D +L+ M+ + G + I +N
Sbjct: 804 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE 863
Query: 315 L---YGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
GL E QD+ +L L+ VD +K +E A R +++
Sbjct: 864 FIESLGLLDEIGQDDTAPFL----SLYRLLVDNLIKA------QRLEMALRLLEEVATFS 913
Query: 372 G--VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
V Y+ LI + C +V +A L EM+ G +P TF +++ GL R +
Sbjct: 914 ATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISE 973
Query: 430 ALKLVE 435
AL L++
Sbjct: 974 ALLLLD 979
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 125/527 (23%), Positives = 223/527 (42%), Gaps = 49/527 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD S + V+ L A + + + R + + + ++D K I+ AR +
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G + TY L+ +V +L M S G PN V Y+ LI C
Sbjct: 541 F-NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 128 KNGKVGRARSLMSDM---------------------EEPNDVTFSILICAYCKEENLVNA 166
K G++ +A + M E PN V + L+ +CK + A
Sbjct: 600 KAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEA 659
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
LL+ G P+ + +++ LC VG++ +A E+ E E G +
Sbjct: 660 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLY-------- 711
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
TY+ LI Y + D A V + M + + N V Y +I GLC G+
Sbjct: 712 -----------TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 760
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
D+ K++Q+ME+ +G + + Y +++ G R + + LE L++M + + P V
Sbjct: 761 TDEAYKLMQMMEE--KGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTY 818
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
+ I C +G ++ A ++M + + Y +I + +E E+ L+ E+
Sbjct: 819 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE--FIESLGLLDEIGQ 876
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P S + ++ L + + AL+L+EE + + S Y+ LI++LC
Sbjct: 877 DDTAPFLSLYRLLVDNLIKAQRLEMALRLLEE-VATFSATLVDYSSTYNSLIESLCLANK 935
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
A L +M KG++P+ T+ SL+ L + + LLL + +S
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFIS 982
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 10/280 (3%)
Query: 234 PNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKI 293
P+ TYN LI ++ + LDSA V +M + + + T LC G+ + L +
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292
Query: 294 LQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGF 351
++ E Y ++ GL + +EA+++L +M P V S + G
Sbjct: 293 ME-----TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGC 347
Query: 352 CVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
+ KR + M+ EG P+ I++ L+HAYC A +L+K+M G+ P
Sbjct: 348 LNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGY 407
Query: 412 STFNTVLSGLCRQGNVGTA--LKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+N ++ +C + + L+L E+ + G + + S + LC G ++ A
Sbjct: 408 VVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 469 SMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNE 508
++ +M+G+G +PD T++ +L L + L LL E
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFE 507
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 193/427 (45%), Gaps = 35/427 (8%)
Query: 97 VGDGFKLLHVMKSR--GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVT 149
G ++ + S V P+ Y+ +I LC++G+ A L M + P+ V
Sbjct: 90 AGSALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVF 149
Query: 150 FSILICAYCKEENLVNALV-LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
FS + C L++A V LL K+ FG + +L LL + GR DAV + E
Sbjct: 150 FS-FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESW 208
Query: 209 GEQG-----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
+ G R+G + ++ M GC P+ T+NIL+ C
Sbjct: 209 IQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQ 268
Query: 252 LDSALDVFNDMKIDGISW-NFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
++ D+ ++ DG+ N VTY ++I G C GR++D L + M +S G++
Sbjct: 269 VNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLES--GTRPNTVT 326
Query: 311 YNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN ++ G + + A+ +Q+ + P V S I G+C G ++DA R + +M
Sbjct: 327 YNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMG 386
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNV 427
+ PNV + +IH+ C++ R EA ++E+ + P +N V+ LC+ G V
Sbjct: 387 QHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQV 446
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A L+ DM +G P Y+ LI C KG A L +MV G PD +T
Sbjct: 447 EEA-NLIVTDMEE--KGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITV 503
Query: 488 NSLLICL 494
NS + C+
Sbjct: 504 NSFISCV 510
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 187/428 (43%), Gaps = 31/428 (7%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
PP E + VI L R+ D +K D + + P F+ + + A
Sbjct: 108 PPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAV 167
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV-KPNSVIYNTLIHS 125
K G + + Y Y L+ L R D L G+ P+ +N +I
Sbjct: 168 TLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKG 227
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VP 180
+C+ G +A L+ M E P+ +T +IL+ C+ + + LL + G +P
Sbjct: 228 VCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMP 287
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+VVT T V+ C GR+ DA+ + +M G PN TYN
Sbjct: 288 NVVTYTSVISGYCKAGRMEDALSVY-------------------NDMLESGTRPNTVTYN 328
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
+LI+ Y + ++SA+ ++ + + + VT+ +LI G C G++DD ++I + M
Sbjct: 329 VLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEM--G 386
Query: 301 KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNV 357
+ + + ++ +++ L ++N+ EAL +L+++ + P+ + I C G V
Sbjct: 387 QHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQV 446
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
E+A M E+G P+ Y LI +C + R+ EA L +M G P T N+
Sbjct: 447 EEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSF 506
Query: 418 LSGLCRQG 425
+S + + G
Sbjct: 507 ISCVLKAG 514
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ + +I G G+A + V+ + P + F+S++D + +D A
Sbjct: 322 PNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRI 381
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG-VKPNSVIYNTLIHSL 126
+ K+M +Q + YT++I++ LC NR + L + R + P + IYN +I L
Sbjct: 382 W-KEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDIL 440
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G+V A +++DMEE P+ T++ILI +C + + A+ L K G PD
Sbjct: 441 CKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDK 500
Query: 183 VTITKVLELLCSVGRVMDAVEIL 205
+T+ + + G + +I+
Sbjct: 501 ITVNSFISCVLKAGMPNEVDQIM 523
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 231/507 (45%), Gaps = 33/507 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G +A M+ K + + +F+S +DV VK D+ A
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y K+M+ G+ + TY IL+KGLC R+ + F + + RG++P+ V Y++LI C
Sbjct: 379 Y-KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFC 437
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + +L DM P+ V + +L+ K+ +++A+ K +VV
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG------------RL----GKVKGGCRFLKEM 227
+++ C + R +A+++ G G R+ G+++ M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G P+ Y LI ++C+ L +F+ M+ + IS + + +I L RI
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 288 DDGLKIL-QLMEDSKEGSKGRISPYNSVLYG---LYRENQQDEALEYLKQMEKLFPRAVD 343
+D K L+E E I YN+++ G L R ++ + E LK + P V
Sbjct: 618 EDASKFFNNLIEGKMEPD---IVTYNTMICGYCSLRRLDEAERIFELLK-VTPFGPNTVT 673
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
++ I C + +++ A R F M E+G PN V Y CL+ + + + + +L +EM
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G P +++ ++ GLC++G V A + + I LP Y+ LI+ C+ G
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ---AIDAKLLPDVVAYAILIRGYCKVG 790
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSL 490
A++L M+ G+ PD L +L
Sbjct: 791 RLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 223/505 (44%), Gaps = 27/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F T+I G + ++ ++ + + P L +++++D K +
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+ + GV+ D ++ + + + + M +G+ PN V Y LI LC+
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G++ A + + EP+ VT+S LI +CK NL + L E G+ PDVV
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 185 ITKVLELLCSVGRVMDAVEI-LEESGEQGRLGKV------KGGCRF---------LKEME 228
+++ L G ++ A+ ++ G+ RL V G CR + M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+V T+ ++ G L+ AL +F M G+ + + Y TLI C +
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
GL++ LM+ +K + I+ N V++ L++ ++ ++A ++ + K+ P V +
Sbjct: 584 IGLQLFDLMQRNKISAD--IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+C +++A+R F+ + PN V LIH C+ + A + M G
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P A T+ ++ + ++ + KL EE +G P YS +I LC++G
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE---KGISPSIVSYSIIIDGLCKRGRVD 758
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A+ + Q + +LPD + + L+
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILI 783
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 30/352 (8%)
Query: 144 EPNDVTFS--ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
EP+ V+ +L +CK E + AL GF +V+ KVL+ G +D
Sbjct: 213 EPSGVSAHGFVLDALFCKGE-VTKALDFHRLVMERGFRVGIVSCNKVLK-----GLSVDQ 266
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+E+ R L + G PNV T+ LI+ +C+ G +D A D+F
Sbjct: 267 IEV---------------ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRE 321
M+ GI + + Y TLI G G + G K+ + +G K + ++S + +
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS--QALHKGVKLDVVVFSSTIDVYVKS 369
Query: 322 NQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
A K+M + + P V ++ I G C DG + +A + Q+++ G P++V Y
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
LI +C+ +R L ++M GY P + ++ GL +QG + A++ ++
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF---SVK 486
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G+ ++ LI C F A + M GI PD T+ +++
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 197/392 (50%), Gaps = 31/392 (7%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRAR----SLMSDMEEPNDVTFSILICAYCKEEN 162
M++ G +PN+V YN +I ++C+ G V +AR SL S +PN V ++ ++ +C E
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
V+A +L++ S P+ T+ + LC +G L KV R
Sbjct: 61 WVDANEILDEVVSENCPPNEATLNVTINTLC----------------RKGLLQKVT---R 101
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
+L++M + GC NV TYN +I CE G +DSAL++ ++M+ G + VTY+T+++GLC
Sbjct: 102 YLEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLC 161
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
S R +D +++ M S+ S +N+++ ++ +ALE KQM + P
Sbjct: 162 SADRWEDAEELMIKM--SQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPN 219
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ S I G +E A ++M +G + +Y L + +E+++ E +++
Sbjct: 220 STTYSTIIGGLVKASKMEQALELLNEMANKGFNTD-KMYLVLTKSLNKEDKIEEVVQVVH 278
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ G P +NTVL GLCR G A+ ++ DM + G +P Y LI+ L
Sbjct: 279 KLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVL-ADM--VSCGCMPDESTYIILIEGLF 335
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
+G + A LL ++ + +L + L N L+
Sbjct: 336 YEGYLKEARELLSRLCSRDVLSNSLIKNEALL 367
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 168/378 (44%), Gaps = 63/378 (16%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL--------- 122
M A G + ++ TY +++ +C V +LL+ + SR KPN+V YNT+
Sbjct: 1 MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60
Query: 123 --------------------------IHSLCKNGKVGRARSLMSDMEE----PNDVTFSI 152
I++LC+ G + + + M + N VT++
Sbjct: 61 WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
+I C++ N+ +AL LL SFG PD+VT VL+ LCS R DA E++ + +
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 180
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R L + T+N +IS +C+ G++ AL+VF M G + N
Sbjct: 181 R-------------------LRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNST 221
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY T+I GL +++ L++L M + + Y + L +E++ +E ++ +
Sbjct: 222 TYSTIIGGLVKASKMEQALELLNEMANKGFNTDKM---YLVLTKSLNKEDKIEEVVQVVH 278
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
+++ + P+ V + +LG C +G A M+ G +P+ Y LI E
Sbjct: 279 KLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEG 338
Query: 391 RVREASELMKEMTGHGYL 408
++EA EL+ + L
Sbjct: 339 YLKEARELLSRLCSRDVL 356
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 134/305 (43%), Gaps = 19/305 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + TV++G D + D V N P+ N ++ L ++ + Y
Sbjct: 43 PNTVNYNTVLKGFCSIERWVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRY 102
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+KM G + TY ++ GLC V +LL M+S G KP+ V YNT++ LC
Sbjct: 103 LEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCS 162
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A LM M + ++ TF+ +I +C++ ++ AL + ++ G P+ T
Sbjct: 163 ADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTT 222
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG---------------RLGKVKGGCRFLKEMER 229
+ ++ L ++ A+E+L E +G + K++ + + +++
Sbjct: 223 YSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQD 282
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P YN ++ C G + A+DV DM G + TY LI GL G + +
Sbjct: 283 SGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKE 342
Query: 290 GLKIL 294
++L
Sbjct: 343 ARELL 347
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P V ++ I C +G+V+ A+ + + PN V Y+ ++ +C ER +A+E+
Sbjct: 8 PNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEI 67
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
+ E+ P +T N ++ LCR+G + + +E+ + G Y+ +I
Sbjct: 68 LDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSK---HGCTTNVVTYNAIIGG 124
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
LCE+G SA LL M G PD +T+N++L L W
Sbjct: 125 LCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRW 166
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 53/110 (48%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
+ +++ + + L + I +VV+ + ++P ++N++L L +
Sbjct: 254 DKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLA 313
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
M++ G D+ TY IL++GL + + +LL + SR V NS+I N
Sbjct: 314 DMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRLCSRDVLSNSLIKN 363
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR--FNMTPSLKIFNSILDVLVKEDIDLARA 66
P+ + + T+I GL +A + ++ + ++ FN K++ + L KED
Sbjct: 218 PNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTD---KMYLVLTKSLNKEDKIEEVV 274
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+ SG+ Y ++ GLC + +L M S G P+ Y LI L
Sbjct: 275 QVVHKLQDSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGL 334
Query: 127 CKNGKVGRARSLMS 140
G + AR L+S
Sbjct: 335 FYEGYLKEARELLS 348
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 216/486 (44%), Gaps = 73/486 (15%)
Query: 18 IRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASG 76
I L +A +IN + D ++ N +N + VL++ + LA +YR+ ++ G
Sbjct: 17 ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRG 76
Query: 77 VQGDDYTYAILMKGLC-LTNRVGDGFKLLHV----MKSRGVKPNSVIYNTLIHSLCKNGK 131
+TY+ + LC N + L+H M S G P+ +NT ++ LC+ +
Sbjct: 77 FSLLPFTYSRFISALCSAPNNIN--LPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNR 134
Query: 132 VGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A L M +P+ V+++I+I A C + A + + G PD
Sbjct: 135 LETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVA 194
Query: 188 VLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
++ LCS GRV A E++ +G +KGG + N YN LI +C
Sbjct: 195 LVVGLCSGGRVDLAYELV--------VGVIKGGVKV-----------NSLVYNALIDGFC 235
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
G +D A+ + M G + VTY+ L+ C G +D+ +++++ ME S G +
Sbjct: 236 RMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS--GVEPD 293
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ YN +L G + N D A +L +E++
Sbjct: 294 LYSYNELLKGFCKANMVDRA--HLMMVERM------------------------------ 321
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+ G+ +VV Y+ +I A+C+ R R+ EL +EM G G P TFN ++ R+G+
Sbjct: 322 -QTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGST 380
Query: 428 GTALKLVEE--DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
KL++E MR LP Y+ ++ LC+ G A + MV G+ PD +
Sbjct: 381 HVVKKLLDEMTKMR-----VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVI 435
Query: 486 TWNSLL 491
++N+LL
Sbjct: 436 SYNALL 441
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 28/401 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD F T + L R + ++ + P + + I+D L + D A
Sbjct: 117 PDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKV 176
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ ++ G+ D L+ GLC RV ++L+ + GVK NS++YN LI C
Sbjct: 177 WRR-LIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFC 235
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN-ALVLLEKSFSFGFVPDV 182
+ G+V +A + + M P+ VT++IL+ YC EE +V+ A+ L+E G PD+
Sbjct: 236 RMGRVDKAMKIKAFMSRTGCVPDLVTYNILL-NYCCEEGMVDEAVRLVETMERSGVEPDL 294
Query: 183 VTITKVLELLCSVGRVMDA----VEILEESG------------EQGRLGKVKGGCRFLKE 226
+ ++L+ C V A VE ++ G + + + G +E
Sbjct: 295 YSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEE 354
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M KG P++ T+NILI ++ G + ++M + + + Y ++ LC G+
Sbjct: 355 MCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGK 414
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+D + + M ++ G + YN++L G + ++ +A+ +M+ L+P V
Sbjct: 415 VDVAHSVFRDMVEN--GVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTY 472
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
L + G + A R +DQM+E G N + + L++A
Sbjct: 473 KLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNA 513
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 22/292 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKM 72
++ +I G R ++ +K +SR P L +N +L+ +E + + M
Sbjct: 226 VYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDG-FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
SGV+ D Y+Y L+KG C N V ++ M+++G+ + V YNT+I + CK +
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARR 344
Query: 132 VGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ L +M P+ VTF+ILI A+ +E + LL++ +PD + T
Sbjct: 345 TRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTA 404
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
V++ LC G+V A + + E G + +V EM+ KG
Sbjct: 405 VVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKG 464
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
P+ TY +++ + A V++ M G + N +TL+ + S
Sbjct: 465 LYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAIQS 516
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
L+ +M G++P FNT L+ LCRQ + TAL+L M GR P Y+ +I
Sbjct: 106 LLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHS-MPSKGRD--PDVVSYTIIID 162
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
ALC F A+ + +++ KG+ PDY +L++ L
Sbjct: 163 ALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGL 199
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 210/446 (47%), Gaps = 31/446 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + G++ TY+IL+ G N L K++ N +IY+ +IH+ C++
Sbjct: 323 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQS 382
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA L+ +MEE P DV S ++ Y +N LV+ E+ GF P +++
Sbjct: 383 GNMERAEELVREMEEDGIDAPIDVYHS-MMHGYTIIQNENKCLVVFERLKECGFKPSIIS 441
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+L L +G+V A+ I +E G L +EM
Sbjct: 442 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 501
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R G P+ YN+LI ++C+ G +D A+ + M+ + + + + +I G G +
Sbjct: 502 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 561
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
L L LM S G + YN++++GL R+++ A+ L +M + P ++
Sbjct: 562 SALDTLDLMRRS--GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTI 619
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G+ G++ A F ++ E G +V IY+ L+ A C+ R++ A + +EM+
Sbjct: 620 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 679
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGF 465
+N ++ G R+G+V A E+ M+ + +P + H Y+ I A C+ G
Sbjct: 680 IPRNTFIYNILIDGWARRGDVWEA----EDLMKQMKEDGVPPNIHTYTSYINACCKAGDM 735
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
Q A ++ +MV G+ P+ T+ +L+
Sbjct: 736 QRAEKVIEEMVDVGLKPNVKTYTTLI 761
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 208/464 (44%), Gaps = 52/464 (11%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ + +L++ VK +A+A K+M + G++ ++ TY++L+ G + + F
Sbjct: 437 PSIISYGCLLNLYVKIG-KVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 495
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
+ M G++P+ IYN LI + CK G + RA ++ M+ +P++ F +I Y
Sbjct: 496 IFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYA 555
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
++ +AL L+ G VP V+T ++ L +V AV +L++
Sbjct: 556 VAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK----------- 604
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M G PN TY I++ Y +G + A + F +K G+ + Y+TL+
Sbjct: 605 --------MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 656
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
R C GR+ L + + M K I YN ++ G R EA + +KQM++
Sbjct: 657 RACCKSGRMQSALAVTREMSFQKIPRNTFI--YNILIDGWARRGDVWEAEDLMKQMKEDG 714
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + I C G+++ A++ ++M++ G PNV Y LI + + A
Sbjct: 715 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 774
Query: 397 ELMKEMTGHGYLPIASTFN----------TVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ +EM G P ++++ TV+ G G + ++ E D+ R ++
Sbjct: 775 KCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAV 834
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
H+S + + GG L + + + PD WNSL
Sbjct: 835 ----HWSRWLHKIERTGG------ALTEALQRIFPPD---WNSL 865
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 162/392 (41%), Gaps = 61/392 (15%)
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
S + +P+ F ++I Y K + +A E + G P+ T ++ +V
Sbjct: 254 SAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAY-AVA 312
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R M +G ++EM+ +G + TY+ILIS + + SA
Sbjct: 313 RDM------------------RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSAD 354
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F + K S N + Y +I C G ++ ++++ ME+ +G I Y+S+++
Sbjct: 355 NLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEE--DGIDAPIDVYHSMMH 412
Query: 317 G---LYREN--------------------------------QQDEALEYLKQMEKLFPRA 341
G + EN + +AL K+ME +
Sbjct: 413 GYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKH 472
Query: 342 VDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+++ +L GF + +A F++M+ G P+ IY+ LI A+C+ + A ++
Sbjct: 473 NNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICIL 532
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
++M P F ++ G G++ +AL ++ R G +P Y+ LI L
Sbjct: 533 EKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS---GCVPTVMTYNALIHGL 589
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K Q A +L +M GI P+ T+ ++
Sbjct: 590 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 621
>gi|255569835|ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534795|gb|EEF36485.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 913
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/524 (23%), Positives = 233/524 (44%), Gaps = 75/524 (14%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
++ +++ M +D + + R P + I N +++ L+K +D+A A Y K+
Sbjct: 165 VYDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFICNFLMNSLIKNSKLDMALAVY-KQ 223
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG- 130
+ G+ +DYTYAI++K LC+ + + ++ M+ G+ P Y I LC N
Sbjct: 224 LKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEM 283
Query: 131 ----------------------------------KVGRARSLMSDMEE----PNDVTFSI 152
K +A S++ DME+ P+ ++
Sbjct: 284 SDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTA 343
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
LIC +CK NL+ A L + S G + V + +L LC +G E++++ +
Sbjct: 344 LICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGM---HSEVVDQFNQFK 400
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
LG G +YN ++ + C+ G L+ A+ + ++MK+ I+ + +
Sbjct: 401 SLGLFLDGV----------------SYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVM 444
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
Y TLI G C G + D K+ + M ++ G + + Y+ ++ G R EAL L
Sbjct: 445 HYTTLINGYCCQGNVVDAFKVFEEMREN--GIEIDVVTYDVLVSGFCRNGLATEALNLLD 502
Query: 333 --QMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
Q +KL P ++ ++ + C+ G V++A+ F+ IE+ + N Y +I+ YC+
Sbjct: 503 YMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNS-IEDKSLDN---YFAMINGYCKAN 558
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
A++L ++ G++ + +N +L LC +G+ L L+E + P
Sbjct: 559 HTAGAAKLFFRLSVKGHVKRSCCYN-LLKNLCEEGDNDGILMLLE---TMLNLNVEPSKF 614
Query: 451 HYSPLIKALCEKG---GFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y L +LC G G + A + ++ +G PD + + ++
Sbjct: 615 IYGKLFTSLCRAGGAAGMRKAQSVFDMLLKRGWTPDLIAYTIMI 658
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 183/398 (45%), Gaps = 48/398 (12%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+D + F ++M +G++ D TY +L+ G C + LL M+++ +KPNS+ YN
Sbjct: 460 VDAFKVF--EEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYN 517
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
++ SLC GKV A ++ + +E+ + + +I YCK + A L + G V
Sbjct: 518 VVVESLCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYCKANHTAGAAKLFFRLSVKGHVK 577
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEE----SGEQGRL--GKV------KGGCRFLKEME 228
+L+ LC G + +LE + E + GK+ GG +++ +
Sbjct: 578 RSCCYN-LLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQ 636
Query: 229 -------RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
++G P++ Y I+I+SYC L A+D+F+DMK GI + VT+ L+
Sbjct: 637 SVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLL--- 693
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFP 339
G +K + ++K G++ +AL +M+ ++ P
Sbjct: 694 --DGHHKAHIKKVYSAANAKGGNEDIF-----------------DALAIWTEMKDTEIKP 734
Query: 340 RAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ ++ I G+C ++ DA FD+MIE G P+++ Y L+ CQ V A L+
Sbjct: 735 DVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNLL 794
Query: 400 KEMTGHGYLPIASTFNTVLSGL--CRQGNVGTALKLVE 435
+M+ G P T + +L G+ RQ + LK +
Sbjct: 795 DQMSLKGISPDTRTMSALLHGILKTRQCSAPQCLKYFD 832
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 199/469 (42%), Gaps = 65/469 (13%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y L+K D +L M R P+ I N L++SL KN K+ A ++ ++
Sbjct: 166 YDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLK 225
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
PND T++I+I A C +L A+ ++++ G P T +E LC V +
Sbjct: 226 RLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLC-VNEMS 284
Query: 200 D-AVEILEE-SGEQGRLG------KVKGGCRFLK---------EMERKGCLPNVDTYNIL 242
D ++L+ G L V+G C LK +ME++G +P++ Y L
Sbjct: 285 DLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTAL 344
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR----ID--DGLKILQL 296
I +C+ G L A N+M G+ N V +++ LC G +D + K L L
Sbjct: 345 ICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGL 404
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVD 354
D YN+V+ L + + +EA+ L +M+ ++ + + I G+C
Sbjct: 405 FLDG--------VSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQ 456
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GNV DA + F++M E G +VV YD L+ +C+ EA L+ M P + T+
Sbjct: 457 GNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITY 516
Query: 415 NTVLSGLCRQGNVGTALKLVE--ED---------MRGIGRGS-----------LPGSGHY 452
N V+ LC G V A + ED + G + + L GH
Sbjct: 517 NVVVESLCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYCKANHTAGAAKLFFRLSVKGHV 576
Query: 453 S-----PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
L+K LCE+G MLL M+ + P + L L +
Sbjct: 577 KRSCCYNLLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCR 625
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 197/490 (40%), Gaps = 73/490 (14%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRF----NMTPSLKIFNSILDVLVK------------- 58
+V+R + + M+ D+ T L+ RF N+ + N ++ VK
Sbjct: 324 SVLRDMEKEGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCL 383
Query: 59 -------EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRG 111
E +D F + GV +Y ++ LC ++ + LL MK +
Sbjct: 384 CELGMHSEVVDQFNQFKSLGLFLDGV-----SYNNVVDALCKLGKLEEAITLLDEMKMKQ 438
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNAL 167
+ + + Y TLI+ C G V A + +M E + VT+ +L+ +C+ AL
Sbjct: 439 INMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDVLVSGFCRNGLATEAL 498
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI---LEESGEQGRLGKVKGGCR-- 222
LL+ + P+ +T V+E LC G+V +A + +E+ + G C+
Sbjct: 499 NLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYCKAN 558
Query: 223 -------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
+ KG + YN+L + CE G D L + M + + Y
Sbjct: 559 HTAGAAKLFFRLSVKGHVKRSCCYNLL-KNLCEEGDNDGILMLLETMLNLNVEPSKFIYG 617
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDS--KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
L LC G G++ Q + D K G + Y ++ R N EA++
Sbjct: 618 KLFTSLCRAGGAA-GMRKAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHD 676
Query: 334 MEKLFPRAVDRSLKILGFCVDG--------------------NVEDAKRCFDQMIEEGGV 373
M++ R + L +DG ++ DA + +M +
Sbjct: 677 MKQ---RGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMKDTEIK 733
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+V+ Y LI YC+ + + +A + EM G P T+ +LSG C++G+V A+ L
Sbjct: 734 PDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVDRAVNL 793
Query: 434 VEE-DMRGIG 442
+++ ++GI
Sbjct: 794 LDQMSLKGIS 803
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 178/444 (40%), Gaps = 79/444 (17%)
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSI 152
L N+ + +K G K + Y +I LC G + RS+ D
Sbjct: 76 LKNQPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLD----------- 124
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFV-----PDVVTITKVLELLC----SVGRVMDAVE 203
+I C + + + + S GFV + ++KV + L SVG DA++
Sbjct: 125 IIYVSCNDNDTPFEISHFLDTLSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAID 184
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L + G R+ +P++ N L++S + LD AL V+ +K
Sbjct: 185 VLFQMG-------------------RRRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLK 225
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK---------------------- 301
G+S N TY +I+ LC G +++ + +++ ME+S
Sbjct: 226 RLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSD 285
Query: 302 ------EGSKGRISP-----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKI 348
+ KG P Y + G E + D+A L+ MEK + P + I
Sbjct: 286 LGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTALI 345
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
FC GN+ A ++M+ +G N VI ++H C+ E + + G
Sbjct: 346 CRFCKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLF 405
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
++N V+ LC+ G + A+ L++E M+ I + HY+ LI C +G
Sbjct: 406 LDGVSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVM----HYTTLINGYCCQGNVVD 461
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A + +M GI D +T++ L+
Sbjct: 462 AFKVFEEMRENGIEIDVVTYDVLV 485
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 120/309 (38%), Gaps = 44/309 (14%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK----------------IDG 266
F +++ G ++ TY +I C G+ +F D+ +D
Sbjct: 86 FFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIFLDIIYVSCNDNDTPFEISHFLDT 145
Query: 267 ISWNFV-------------TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY-- 311
+S FV YD L++ S G DD + +L M + R P+
Sbjct: 146 LSDGFVDVDSKKQSLFMSKVYDALVKAYVSVGMFDDAIDVLFQM------GRRRFVPHIF 199
Query: 312 --NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
N ++ L + ++ D AL KQ+++L P ++ I C++G++E+A +M
Sbjct: 200 ICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEM 259
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
E G P Y I C E ++++ G + + G C +
Sbjct: 260 EESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKF 319
Query: 428 GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
A + V DM G +P Y+ LI C+ G A L +M+ KG+ + +
Sbjct: 320 DKA-ESVLRDMEK--EGMVPDMHCYTALICRFCKAGNLLKAYAFLNEMMSKGVKVNCVIV 376
Query: 488 NSLLICLSQ 496
S+L CL +
Sbjct: 377 GSILHCLCE 385
>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 732
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 220/511 (43%), Gaps = 39/511 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLA 64
++ PD + ++ GL R R + V L+ + P + I++ + K+
Sbjct: 192 MRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSK 251
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
+ +M + GV+ + Y Y I ++ LC N++ + K+ +MK GV PN Y+ +I
Sbjct: 252 KEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMID 311
Query: 125 SLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + +A L ++ PN V F L+ +CK LV A L FG P
Sbjct: 312 GYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDP 371
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
++ ++ C G +++A+ +L EME P+V TY
Sbjct: 372 NLYVYNCLIHGQCKSGNMLEAMGLLS-------------------EMESLNLSPDVFTYT 412
Query: 241 ILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS 300
ILI+ C L A +F MK + I + VTY++LI G C I+ L + M S
Sbjct: 413 ILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSS 472
Query: 301 KEGSKGRISPYNSVL--YGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
G + I +++++ Y R + L + ++ + P V + I + N++
Sbjct: 473 --GVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMK 530
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE----MTGHGYLPIAST- 413
+A R + M+E G PN + CL+ + +E R+ +A + E TG + +
Sbjct: 531 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWK 590
Query: 414 ---FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
F ++ GLC+ G + A + + G G P Y ++KA + M
Sbjct: 591 YVGFTCLIEGLCQNGYILRASRFFSDMKSG---GVTPDIWSYVSMLKAHLREKRITDTMM 647
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWL 501
L M+ GILP+ L N LL Q+ +L
Sbjct: 648 LHCDMIKTGILPN-LMVNQLLAMFYQENGYL 677
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/456 (25%), Positives = 214/456 (46%), Gaps = 36/456 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P F ++ G+ R I V+ + + + P++ + + VL ++ ID A
Sbjct: 227 PSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA--- 283
Query: 68 YR--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
YR K+M G D TY +L+ LC ++ D L MKS KP+ V Y TL+
Sbjct: 284 YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 126 LCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
G + + + ++ME P+ VTF+IL+ A CK + A LL+ G +P+
Sbjct: 344 FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403
Query: 182 VVTITKVLELLCSVGRVMDAVEI-------------------LEESGEQGRLGKVKGGCR 222
+ T ++ L R+ DA+++ ++ G+ G GK
Sbjct: 404 LHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK---ALE 460
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
++M+ +G PN+ N + S E G L A +FN++K G++ + VTY+ +++
Sbjct: 461 TFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYS 520
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
G++D+ +K+L M SK + + NS++ LY+ + +EA + +ME+ L P
Sbjct: 521 KVGQVDEAIKLLSEM--SKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPT 578
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
V ++ + G +G ++ A + F+ M G PN + ++ L+ C+ + V A ++
Sbjct: 579 VVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFY 638
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
+MT P TFNT++ G +Q + A+ L +
Sbjct: 639 KMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQ 674
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 130/492 (26%), Positives = 228/492 (46%), Gaps = 56/492 (11%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M++ G++ T++ LM + LL M+S G++PN Y I L ++
Sbjct: 218 RRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRD 277
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK+ A +M M++ P+ VT+++LI A C L +A+ L K S PD VT
Sbjct: 278 GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTY 337
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
V +L++ + G L KV+ + EME G P+V T+ IL+++
Sbjct: 338 ----------------VTLLDKFSDCGHLDKVE---KIWTEMEADGYAPDVVTFTILVNA 378
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C+ G ++ A D+ + M+ G+ N TY+TLI GL R+DD L + ME S
Sbjct: 379 LCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNME-----SL 433
Query: 306 G-RISPYNSVLYGLY--RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G + Y +L Y + +ALE ++M+ + P V + + G + +A
Sbjct: 434 GVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEA 493
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K F+++ G P+ V Y+ ++ Y + +V EA +L+ EM+ P N+++
Sbjct: 494 KAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDT 553
Query: 421 LCRQGNVGTALKLV--EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
L + G V A ++ E+M P Y+ L+ L ++G Q A L M G
Sbjct: 554 LYKAGRVEEAWQMFCRMEEM-----NLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGH 608
Query: 479 GILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG- 537
G P+ +T+N+LL CL + +E+ + + ++++ R + + N + HG
Sbjct: 609 GCSPNTITFNTLLDCLCKN---------DEVDLALKMFYKMTTMNCRPDVLTFNTIIHGF 659
Query: 538 ------AGSVWL 543
++WL
Sbjct: 660 IKQNQIKNAIWL 671
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/546 (24%), Positives = 230/546 (42%), Gaps = 67/546 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD + +++ + +++ +K +S+ P + + NS++D L K ++ A
Sbjct: 507 PDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQM 566
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M + TY IL+ GL ++ +L M G PN++ +NTL+ LC
Sbjct: 567 F-CRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLC 625
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KN +V A + M P+ +TF+ +I + K+ + NA+ L + PD V
Sbjct: 626 KNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHV 684
Query: 184 TITKVLELLCSVGRVMDAVEILEE-------SGEQGRLGKVKGG---------------- 220
T+ +L + G++ DA I E+ + ++ V GG
Sbjct: 685 TLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGER 744
Query: 221 --CR----------------------------FLKEMERKGCLPNVDTYNILISSYCETG 250
CR F+K + G P + YN+LI + E
Sbjct: 745 LVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVH 804
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
++ A ++F +MK G + + TY++LI G+I++ + M G K
Sbjct: 805 NVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEM--LTRGCKPNTIT 862
Query: 311 YNSVLYGLYRENQQDEALE-YLKQMEKLF-PRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN V+ L + N+ D+A++ Y + F P I G G ++DA FD M+
Sbjct: 863 YNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMV 922
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
G PN IY+ L++ Y + V A E K M G P ++ ++ LC G V
Sbjct: 923 HYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVD 982
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL E+ + G P Y+ +I L + A L +M +GI+PD T+N
Sbjct: 983 DALHYFEKLKQA---GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYN 1039
Query: 489 SLLICL 494
SL++ L
Sbjct: 1040 SLILNL 1045
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 129/546 (23%), Positives = 235/546 (43%), Gaps = 73/546 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F ++ L +A IN+ D + + + P+L +N+++ L++ + +D A
Sbjct: 367 PDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDL 426
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M + GV+ YTY +L+ + G + MK+RG+ PN V N ++SL
Sbjct: 427 F-SNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLA 485
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++G A+++ ++++ P+ VT+++++ Y K + A+ LL + PDV+
Sbjct: 486 EMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVI 545
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLKEM 227
I +++ L GRV +A ++ E G+ G+++ + + M
Sbjct: 546 VINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM 605
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-----------------------KI 264
GC PN T+N L+ C+ +D AL +F M +I
Sbjct: 606 NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQI 665
Query: 265 DGISWNF-----------VTYDTLIRGLCSGGRIDDGLKILQLMED--SKEGSKGRISPY 311
W F VT TL+ G+ G+I+D +I ED + GS S +
Sbjct: 666 KNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRI---TEDFFYQVGSNIDRSFW 722
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL-----GFCVDGNVEDAKRCFDQ 366
V+ G+ E ++A+ + E+L RA+ + +L C A+ F +
Sbjct: 723 EDVMGGILTEAGTEKAILF---GERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVK 779
Query: 367 MIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+E GV P + +Y+ LI + + V A L +EM G P T+N+++ + G
Sbjct: 780 FTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSG 839
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
+ L +E + RG P + Y+ +I L + A L +V P
Sbjct: 840 KINELFDLYDEMLT---RGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896
Query: 486 TWNSLL 491
T+ L+
Sbjct: 897 TFGPLI 902
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 223/525 (42%), Gaps = 68/525 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F T++ L + ++ +K ++ N P + FN+I+ +K++ + A +
Sbjct: 612 PNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQN-QIKNAIW 670
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-----------------VMKS-- 109
M ++ D T L+ G+ + ++ D F++ VM
Sbjct: 671 LFHQMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGIL 730
Query: 110 -----------------RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PND 147
R + + + +I LCK+ K AR++ + P
Sbjct: 731 TEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL 790
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+++LI + + N+ A L E+ S G PD T +++
Sbjct: 791 KVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLID----------------- 833
Query: 208 SGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGI 267
G+ GK+ EM +GC PN TYN++IS+ ++ LD A+D++ ++
Sbjct: 834 --AHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF 891
Query: 268 SWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEA 327
S T+ LI GL GR+DD ++ M G + + YN ++ G + D A
Sbjct: 892 SPTPCTFGPLIDGLLKSGRLDDAHEMFDGM--VHYGCRPNSAIYNILVNGYGKLGHVDTA 949
Query: 328 LEYLKQMEKLFPRAVDRSLKILG--FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E+ K+M K R +S IL C+ G V+DA F+++ + G P++V Y+ +I+
Sbjct: 950 CEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMING 1009
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+ +R EA L EM G +P T+N+++ L G + A K+ EE ++ IG
Sbjct: 1010 LGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEE-LQFIGLK- 1067
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
P Y+ LI+ G + A + +M+ G P+ T+ L
Sbjct: 1068 -PNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 22/319 (6%)
Query: 175 SFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLP 234
S G +P+VV T+ + + RV VE + M+R+
Sbjct: 113 SVGELPNVVHTTETCNHMLEILRVHRRVEDM---------------AFVFDLMQRQIIRR 157
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NVDTY I+ S G L A M+ G N +Y+ LI L G + L++
Sbjct: 158 NVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVY 217
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
+ M EG K + +++++ + + L++ME L P ++ I
Sbjct: 218 RRM--VSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLG 275
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
DG +++A R +M ++G P+VV Y LI A C ++ +A L +M + P
Sbjct: 276 RDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKV 335
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+ T+L G++ K+ E M G P ++ L+ ALC+ G A LL
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTE-MEADGYA--PDVVTFTILVNALCKAGRINEAFDLL 392
Query: 473 VQMVGKGILPDYLTWNSLL 491
M +G+LP+ T+N+L+
Sbjct: 393 DTMRKQGVLPNLHTYNTLI 411
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 4/172 (2%)
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKIL-GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+D A + ++ R VD L I + G + A ++M E G V N Y+ L
Sbjct: 141 EDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGL 200
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
IH Q +EA E+ + M G P TF+ ++ ++ N+ T + L+EE M +G
Sbjct: 201 IHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEE-MESMG 259
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
P Y+ I+ L G A ++ +M G PD +T+ L+ L
Sbjct: 260 LR--PNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDAL 309
>gi|242039913|ref|XP_002467351.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
gi|241921205|gb|EER94349.1| hypothetical protein SORBIDRAFT_01g026260 [Sorghum bicolor]
Length = 846
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 208/454 (45%), Gaps = 64/454 (14%)
Query: 94 TNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ V + + M +RG +P+ +N +I C G V A L+ M E PN +
Sbjct: 197 SGEVHAAWNVFEEMAARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCS 256
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
++ILI +C +A L E+ G P VVT ++++LC GR+ +A + +E
Sbjct: 257 YNILIKGHCVFGWSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMA 316
Query: 210 EQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ G + G++ C +EM+ +G +P+ T+NI+ + + G
Sbjct: 317 QVGIQANTITFNVLIDGYAKTGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFG--- 373
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A + +D + G D L+ LC R+DD ++L+ ++G+ ++ +N+
Sbjct: 374 HAAQLVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLR--GAIEQGAPLSVTGFNA 431
Query: 314 VLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAK---------- 361
++ +E +EA E + M KL P + + I+G C G +++A+
Sbjct: 432 LIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG 491
Query: 362 ------------------------RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
+C+D M + G P+ + + I+ C+ + V EA +
Sbjct: 492 YCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQ 551
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIK 457
EMT G +P T+N+++S LCR GN+ ALKL +++MR G +P + LI
Sbjct: 552 AFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKL-QQNMR--QNGLVPDIYTSNILID 608
Query: 458 ALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
LC +G + LL+ M G+ PD +T+N+++
Sbjct: 609 GLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTII 642
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 214/503 (42%), Gaps = 56/503 (11%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PSL FN+++ + + M G+ + +Y IL+KG C+ D FKL
Sbjct: 217 PSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSRDAFKL 276
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
M G +P V YN L+ LC G++ AR L +M + N +TF++LI Y K
Sbjct: 277 FEEMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQANTITFNVLIDGYAK 336
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE-------ILEESGEQG 212
+ A + + G VPD T + G V + G
Sbjct: 337 TGRMDQACAAYREMKARGLVPDSCTFNIIAAGAYKFGHAAQLVHDHDMFGSHMLADGMDM 396
Query: 213 RLGKVKGGCRF------LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+ ++ CR L+ +G +V +N LI++Y + G+ + A +++ M G
Sbjct: 397 LVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGFNALIAAYSKEGLHEEAFELYRIMNKLG 456
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLM----------------------------- 297
++ + T++ LI GLC+ GR+D+ +L+ M
Sbjct: 457 LAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDASFREGNAVCALK 516
Query: 298 ---EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
+ K G + +++ + GL R + +EA + +M + P + I C
Sbjct: 517 CWDDMGKLGLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALC 576
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
GN+ +A + M + G VP++ + LI C+E ++ L+ +M +G P
Sbjct: 577 RAGNMTEALKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTV 636
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
T+NT+++ CR ++ +A+ + + + G P Y+ + +LC A +L
Sbjct: 637 TYNTIINAYCRAKDMNSAMNFMN---KMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVL 693
Query: 473 VQMVGKGILPDYLTWNSLL--IC 493
++V G PD +T+N+L+ IC
Sbjct: 694 DELVAMGCPPDSVTYNTLMDGIC 716
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 182/450 (40%), Gaps = 66/450 (14%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM- 142
+A L G+ + +L ++ G P+ L+ L ++G+V A ++ +M
Sbjct: 157 HAFLAAGM-----AAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMA 211
Query: 143 ---EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
P+ TF+ +I +C + A LL FG VP+V + +++ C G
Sbjct: 212 ARGPRPSLATFNAMILGFCHRGLVRVASGLLGIMGEFGIVPNVCSYNILIKGHCVFGWSR 271
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
DA ++ EE M R GC P V TYNIL+ C G + A +F
Sbjct: 272 DAFKLFEE-------------------MHRSGCEPTVVTYNILVDVLCHEGRMPEARRLF 312
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M GI N +T++ LI G GR+D + M+ G +N + G Y
Sbjct: 313 DEMAQVGIQANTITFNVLIDGYAKTGRMDQACAAYREMK--ARGLVPDSCTFNIIAAGAY 370
Query: 320 RENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
+ + L + M A + + C D ++DA IE+G +V +
Sbjct: 371 KFGHAAQ-LVHDHDMFGSHMLADGMDMLVCRLCWDCRLDDAWELLRGAIEQGAPLSVTGF 429
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVE---- 435
+ LI AY +E EA EL + M G P +STFN ++ GLC QG + A L+E
Sbjct: 430 NALIAAYSKEGLHEEAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVS 489
Query: 436 -----------------------------EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
+DM +G P +S I LC
Sbjct: 490 KGYCLSTSFTICLDASFREGNAVCALKCWDDMGKLGLQ--PDFIAFSAYINGLCRLDYVN 547
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
A +M +GI+P+ T+NS++ L +
Sbjct: 548 EAYQAFAEMTARGIVPNNFTYNSIISALCR 577
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 31/345 (8%)
Query: 99 DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPN---DVTFSILIC 155
+ F+L +M G+ P+S +N LI LC G++ A+ L+ M +F+I +
Sbjct: 444 EAFELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLD 503
Query: 156 AYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
A +E N V AL + G PD + + + LC RL
Sbjct: 504 ASFREGNAVCALKCWDDMGKLGLQPDFIAFSAYINGLC-------------------RLD 544
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
V + EM +G +PN TYN +IS+ C G + AL + +M+ +G+ + T +
Sbjct: 545 YVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKLQQNMRQNGLVPDIYTSN 604
Query: 276 TLIRGLCSGGRID--DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
LI GLC G+++ D L L++ G YN+++ R + A+ ++ +
Sbjct: 605 ILIDGLCREGKLEMVDNL----LLDMCSNGLTPDTVTYNTIINAYCRAKDMNSAMNFMNK 660
Query: 334 M--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M P ++ + C + + A + D+++ G P+ V Y+ L+ C +
Sbjct: 661 MLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVTYNTLMDGICSDVL 720
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
R A L + + P T N LS C+QG AL E+
Sbjct: 721 DR-AMILTGRLIKMAFQPNTITLNVFLSHFCKQGFGKRALMWAEK 764
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+Q D ++ + GLC + V + ++ M +RG+ PN+ YN++I +LC+ G + A
Sbjct: 525 GLQPDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEA 584
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L +M + P+ T +ILI C+E L LL S G PD VT ++
Sbjct: 585 LKLQQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINA 644
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C R + F+ +M GC P++ TYNI + S C +
Sbjct: 645 YC-------------------RAKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHM 685
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
L+ A V +++ G + VTY+TL+ G+CS
Sbjct: 686 LNQAGKVLDELVAMGCPPDSVTYNTLMDGICS 717
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 34/275 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F I GL R +N+ +A ++ + P+ +NSI+ L +
Sbjct: 528 PDFIAFSAYINGLCRLDYVNEAYQAFAEMTARGIVPNNFTYNSIISALCRAGNMTEALKL 587
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M +G+ D YT IL+ GLC ++ LL M S G+ P++V YNT+I++ C+
Sbjct: 588 QQNMRQNGLVPDIYTSNILIDGLCREGKLEMVDNLLLDMCSNGLTPDTVTYNTIINAYCR 647
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ A + M+ M EP+ T++I + + C L A +L++ + G PD VT
Sbjct: 648 AKDMNSAMNFMNKMLAAGCEPDIFTYNIWMHSLCSNHMLNQAGKVLDELVAMGCPPDSVT 707
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ +CS V+D IL GRL K+ PN T N+ +S
Sbjct: 708 YNTLMDGICS--DVLDRAMIL-----TGRLIKM-------------AFQPNTITLNVFLS 747
Query: 245 SYCETGVLDSAL----------DVFNDMKIDGISW 269
+C+ G AL VF+D + I W
Sbjct: 748 HFCKQGFGKRALMWAEKLREDSFVFDDATRNIIDW 782
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
L + F G +A ++ G P++ L+ + V A + +EM
Sbjct: 154 LALHAFLAAGMAAEALDVLTRVRRSGKTPSLSALAALLRLLFRSGEVHAAWNVFEEMAAR 213
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI--GRGSLPGSGHYSPLIKALCEKG 463
G P +TFN ++ G C +G V A L+ GI G +P Y+ LIK C G
Sbjct: 214 GPRPSLATFNAMILGFCHRGLVRVASGLL-----GIMGEFGIVPNVCSYNILIKGHCVFG 268
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ A L +M G P +T+N L+ L +
Sbjct: 269 WSRDAFKLFEEMHRSGCEPTVVTYNILVDVLCHE 302
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 214/483 (44%), Gaps = 38/483 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D I +++ G R + D +K D++S+ + SIL + E L AF
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288
Query: 70 KKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M G Q TY +L+K LC + F L M RG KPN Y LI LC+
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348
Query: 129 NGKV----GRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+GK+ G R ++ D P+ +T++ LI YCK+ +V A LL P+V T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+++E LC VG+ AV +L+ + G R G + + L M
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
P+ T+ +I+++C+ G D A M GIS + VT TLI G+C G+
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528
Query: 289 DGLKILQLMEDSKEGSKGRI--SPY--NSVLYGLYRENQQDEALEYLKQMEK--LFPRAV 342
D L IL+ + K RI +P+ N +L L + + E L L ++ K L P V
Sbjct: 529 DALFILETL------VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ + G G++ + R + M G +PNV Y +I+ CQ RV EA +L+ M
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA--LC 460
G P T+ ++ G G + AL+ V + RG YS L++ L
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA---MVERGYELNDRIYSSLLQGFVLS 699
Query: 461 EKG 463
+KG
Sbjct: 700 QKG 702
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 209/485 (43%), Gaps = 66/485 (13%)
Query: 49 FNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM- 107
+ +I++ L K A + K++ G D + L+ G C + D K+ VM
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
K PNSV Y+ LIH LC+ G++ A L M E P+ T+++LI A C +
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 164 VNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRF 223
A L ++ G P+V T T +++ LC G++ +A G CR
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA----------------NGVCR- 360
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+M + P+V TYN LI+ YC+ G + A ++ M+ N T++ L+ GLC
Sbjct: 361 --KMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRA 341
G+ + +L+ M D+ G I YN ++ GL RE + A + L M + P
Sbjct: 419 VGKPYKAVHLLKRMLDN--GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
+ + I FC G + A M+ +G + V LI C+ + R+A +++
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 402 M-------TGH----------------------------GYLPIASTFNTVLSGLCRQGN 426
+ T H G +P T+ T++ GL R G+
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ + +++E G LP Y+ +I LC+ G + A LL M G+ P+++T
Sbjct: 597 ITGSFRILELMKLS---GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT 653
Query: 487 WNSLL 491
+ ++
Sbjct: 654 YTVMV 658
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 186/402 (46%), Gaps = 41/402 (10%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFS----ILICAYCKEEN 162
M++ G + Y T++++LCKNG A MS + + V S L+ +C+ N
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 163 LVNALVLLE-KSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGC 221
L +AL + + S P+ V+ + ++ LC VGR+ +A + ++ GE
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGE----------- 294
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
KGC P+ TY +LI + C+ G++D A ++F++M G N TY LI GL
Sbjct: 295 --------KGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL 346
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEKL 337
C G+I++ + + M K RI P YN+++ G ++ + A E L MEK
Sbjct: 347 CRDGKIEEANGVCRKM------VKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400
Query: 338 FPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
+ R+ L G C G A +M++ G P++V Y+ LI C+E + A
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSP 454
+L+ M P TF +++ C+QG A + +R GI + G +
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG----TT 516
Query: 455 LIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
LI +C+ G + A +L +V IL + N +L LS+
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 223/507 (43%), Gaps = 86/507 (16%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL R I + + + + PS+ +N++++ K D + AF
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK-DGRVVPAFE 392
Query: 69 RKKMMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK---SRGVKPNSVIYNTLIH 124
+M + + T+ LM+GLC RVG +K +H++K G+ P+ V YN LI
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLC---RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Query: 125 SLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
LC+ G + A L+S M EP+ +TF+ +I A+CK+ A L G
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 181 DVVTITKVLELLCSVGRVMDAVEIL-----------------------------EESGEQ 211
D VT T +++ +C VG+ DA+ IL EE
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 212 GRL----------------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G++ G + G R L+ M+ GCLPNV Y I+I+ C+
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G ++ A + + M+ G+S N VTY +++G + G++D L+ ++ M + RI
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRI- 688
Query: 310 PYNSVLYGLYR-----ENQQDEALEYLKQMEKLFPRAVDRSLKI---LGFCVDG------ 355
Y+S+L G +N ++ + + + + P ++ + + LG C+ G
Sbjct: 689 -YSSLLQGFVLSQKGIDNSEESTVSDI-ALRETDPECINELISVVEQLGGCISGLCIFLV 746
Query: 356 ------NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
D Q + E GV D ++ +YC +++ + EL+ + G++P
Sbjct: 747 TRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVP 806
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEE 436
+F V+ GL ++G+ A +LV E
Sbjct: 807 SFKSFCLVIQGLKKEGDAERARELVME 833
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 158/391 (40%), Gaps = 60/391 (15%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVT----FSILICAYCKEENLVNA 166
G + N Y++L+ SL K A ME V + ++ A CK A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
+ + K GFV D T +L C + DA+++ + ++
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE--------------- 259
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
C PN +Y+ILI CE G L+ A + + M G + TY LI+ LC G
Sbjct: 260 ---VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
ID + M G K + Y ++ GL
Sbjct: 317 IDKAFNLFDEM--IPRGCKPNVHTYTVLIDGL---------------------------- 346
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
C DG +E+A +M+++ P+V+ Y+ LI+ YC++ RV A EL+ M
Sbjct: 347 -----CRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRA 401
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
P TFN ++ GLCR G A+ L++ R + G P Y+ LI LC +G
Sbjct: 402 CKPNVRTFNELMEGLCRVGKPYKAVHLLK---RMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 467 SASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+A LL M I PD LT+ +++ +Q
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 156/382 (40%), Gaps = 68/382 (17%)
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG--------- 285
N Y+ L+ S + + A + M+ DG + Y T++ LC G
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 286 --------------------------RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ D LK+ +M + +S Y+ +++GL
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVS-YSILIHGLC 277
Query: 320 RENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ +EA QM + + R+ +L C G ++ A FD+MI G PNV
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y LI C++ ++ EA+ + ++M P T+N +++G C+ G V A +L+
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ R P ++ L++ LC G A LL +M+ G+ PD +++N L+ L ++
Sbjct: 398 EK---RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 498 ----TTWLLLLLLN------EMVSFVMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGLRI 547
T + LL +N + ++F +++ + K S +LGL +
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK-----------ADVASAFLGLML 503
Query: 548 H------DTTHTFIIDRRVEIG 563
+ T T +ID ++G
Sbjct: 504 RKGISLDEVTGTTLIDGVCKVG 525
>gi|357146655|ref|XP_003574066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g13630-like [Brachypodium distachyon]
Length = 795
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/506 (24%), Positives = 242/506 (47%), Gaps = 30/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P ++ + RA+MI+D + ++ NM S+ ++S+L L D+ L
Sbjct: 133 PSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQISVSTYDSLLYGLRMTDMALE---L 189
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSLC 127
++M A G+ +Y+++I++ GLC ++VG+ L K KP + +N L+ +LC
Sbjct: 190 FEEMEAYGISKSEYSHSIIIDGLCKQDKVGEALSFLQEARKGERFKPLGMSFNVLMSALC 249
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G + A+S + M + P+ T+S LI CK L A+ L E+ G + V
Sbjct: 250 NWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETV 309
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T ++ +G + +I++ QG G V+ G + ++
Sbjct: 310 TYNSLINGYRLLGLTREVPKIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDI 369
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G N+ TY++L+++ + G++ A ++ ++ G+ + + Y LI G C G I
Sbjct: 370 LDQGLQLNIVTYSVLLNALFKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEI 429
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME-KLFP-RAVDRS 345
+ L++ +M S++ ++ + S+L GL ++ EA YL+ + K P V +
Sbjct: 430 ERALEVCDVMCCSQKVVPTSLN-HLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYN 488
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G+ G++ +A +DQ++ G P +V + +++ YC+ ++ A + +
Sbjct: 489 VVIDGYAKIGDISNAVGLYDQIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQIS 548
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
LP T+ T++ L G V T L ++ E + +G P + YS +IK LC++ F
Sbjct: 549 SLLPTMVTYTTLMDALSEAGKVNTMLSILYE---MVEKGIKPNAITYSVVIKGLCKELRF 605
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A L M G+G+ D +T+N+L+
Sbjct: 606 HDAIHFLDNMHGEGVNADPVTYNTLI 631
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 238/526 (45%), Gaps = 32/526 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+I GL + +++ V + V+ M +NS+++ + L R
Sbjct: 271 PDRYTYSTLIHGLCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGY--RLLGLTREVP 328
Query: 69 R--KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
+ + M G++ D TY IL+ G C + V +G K+ + + +G++ N V Y+ L+++L
Sbjct: 329 KIIQFMRYQGIEPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNAL 388
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLE-KSFSFGFVPD 181
K G V A +L+ ++ + + + +SILI YCK + AL + + S VP
Sbjct: 389 FKKGLVHEAENLLGEIHSIGLDMDIIAYSILIHGYCKLGEIERALEVCDVMCCSQKVVPT 448
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQ----------------GRLGKVKGGCRFLK 225
+ +L LC G +++A LE + ++G +
Sbjct: 449 SLNHLSILVGLCKKGLLVEARWYLENVAVKYQPGDVVLYNVVIDGYAKIGDISNAVGLYD 508
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
++ G P + T N ++ YC+ G L +A F ++I + VTY TL+ L G
Sbjct: 509 QIVIAGMFPTIVTCNSILYGYCKCGDLQAAESYFRAIQISSLLPTMVTYTTLMDALSEAG 568
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+++ L IL E ++G K Y+ V+ GL +E + +A+ +L M E + V
Sbjct: 569 KVNTMLSIL--YEMVEKGIKPNAITYSVVIKGLCKELRFHDAIHFLDNMHGEGVNADPVT 626
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I GFC +++ A D+M+ G VP V Y+ LI+ C + +V +A L++ +
Sbjct: 627 YNTLIQGFCEVQDIQMAFHIHDRMVYCGIVPTPVTYNFLINVLCLKGQVIQAEYLLESLR 686
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G + T++ C +G A+ L + + G +S I LC++
Sbjct: 687 ERGIELRKFAYTTLIKAECAKGMPYEAISLFG---KLLDDGFETTVKDFSAAINRLCKRK 743
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEM 509
+ A M + M+ G+ PD + L+ L ++ L LL+ +
Sbjct: 744 FAKEAVMFIPFMLSAGVFPDTQVYYVLVRALQKRKELFYLPLLHAL 789
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 141/292 (48%), Gaps = 15/292 (5%)
Query: 210 EQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISW 269
EQG G C L+ R+ C P+ ++ L +SY ++ AL V + M +
Sbjct: 111 EQGS-GSAAILCDILRNGFRE-CDPSSIMWDALANSYARAQMIHDALYVLSKMNSLNMQI 168
Query: 270 NFVTYDTLIRGLCSGGRIDD-GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ TYD+L+ GL R+ D L++ + ME + SK S ++ ++ GL ++++ EAL
Sbjct: 169 SVSTYDSLLYGL----RMTDMALELFEEME-AYGISKSEYS-HSIIIDGLCKQDKVGEAL 222
Query: 329 EYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
+L++ E+ P + ++ + C G ++ AK M++ G P+ Y LIH
Sbjct: 223 SFLQEARKGERFKPLGMSFNVLMSALCNWGFIQPAKSFLCLMLKYGLNPDRYTYSTLIHG 282
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C+ + EA +L + +T G T+N++++G G K++ + MR +G
Sbjct: 283 LCKIGFLDEAVDLFERVTEEGMKLETVTYNSLINGYRLLGLTREVPKII-QFMR--YQGI 339
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P Y+ LI CE G + + ++ +G+ + +T++ LL L ++
Sbjct: 340 EPDIVTYTILIAGHCESGDVEEGMKIRNDILDQGLQLNIVTYSVLLNALFKK 391
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 210/446 (47%), Gaps = 31/446 (6%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M + G++ TY+IL+ G N L K++ N +IY+ +IH+ C++
Sbjct: 322 EEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQS 381
Query: 130 GKVGRARSLMSDMEE-----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA L+ +MEE P DV S ++ Y +N LV+ E+ GF P +++
Sbjct: 382 GNMERAEELVCEMEEDGIDAPIDVYHS-MMHGYTIIQNENKCLVVFERLKECGFKPSIIS 440
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
+L L +G+V A+ I +E G L +EM
Sbjct: 441 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 500
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
R G P+ YN+LI ++C+ G +D A+ + M+ + + + + +I G G +
Sbjct: 501 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 560
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSL 346
L L LM S G + YN++++GL R+++ A+ L +M + P ++
Sbjct: 561 SALDTLDLMRRS--GCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTI 618
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G+ G++ A F ++ E G +V IY+ L+ A C+ R++ A + +EM+
Sbjct: 619 IMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQK 678
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH-YSPLIKALCEKGGF 465
+N ++ G R+G+V A E+ M+ + +P + H Y+ I A C+ G
Sbjct: 679 IPRNTFIYNILIDGWARRGDVWEA----EDLMKQMKEDGVPPNIHTYTSYINACCKAGDM 734
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
Q A ++ +MV G+ P+ T+ +L+
Sbjct: 735 QRAEKVIEEMVDVGLKPNVKTYTTLI 760
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 208/464 (44%), Gaps = 52/464 (11%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAF-YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ + +L++ VK +A+A K+M + G++ ++ TY++L+ G + + F
Sbjct: 436 PSIISYGCLLNLYVKIG-KVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 494
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYC 158
+ M G++P+ IYN LI + CK G + RA ++ M+ +P++ F +I Y
Sbjct: 495 IFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYA 554
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
++ +AL L+ G VP V+T ++ L +V AV +L++
Sbjct: 555 VAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK----------- 603
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
M G PN TY I++ Y +G + A + F +K G+ + Y+TL+
Sbjct: 604 --------MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 655
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK-- 336
R C GR+ L + + M K I YN ++ G R EA + +KQM++
Sbjct: 656 RACCKSGRMQSALAVTREMSFQKIPRNTFI--YNILIDGWARRGDVWEAEDLMKQMKEDG 713
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + I C G+++ A++ ++M++ G PNV Y LI + + A
Sbjct: 714 VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRAL 773
Query: 397 ELMKEMTGHGYLPIASTFN----------TVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
+ +EM G P ++++ TV+ G G + ++ E D+ R ++
Sbjct: 774 KCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAV 833
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSL 490
H+S + + GG L + + + PD WNSL
Sbjct: 834 ----HWSRWLHKIERTGG------ALTEALQRIFPPD---WNSL 864
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 161/392 (41%), Gaps = 61/392 (15%)
Query: 137 SLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVG 196
S + +P+ F ++I Y K + +A E + G P+ T ++ +V
Sbjct: 253 SAFERIPKPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAY-AVA 311
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
R M +G ++EM+ +G + TY+ILIS + + SA
Sbjct: 312 RDM------------------RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSAD 353
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
++F + K S N + Y +I C G ++ +++ ME+ +G I Y+S+++
Sbjct: 354 NLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEE--DGIDAPIDVYHSMMH 411
Query: 317 G---LYREN--------------------------------QQDEALEYLKQMEKLFPRA 341
G + EN + +AL K+ME +
Sbjct: 412 GYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKH 471
Query: 342 VDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+++ +L GF + +A F++M+ G P+ IY+ LI A+C+ + A ++
Sbjct: 472 NNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICIL 531
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKAL 459
++M P F ++ G G++ +AL ++ R G +P Y+ LI L
Sbjct: 532 EKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRS---GCVPTVMTYNALIHGL 588
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
K Q A +L +M GI P+ T+ ++
Sbjct: 589 VRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 620
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,903,575,967
Number of Sequences: 23463169
Number of extensions: 372166587
Number of successful extensions: 1090607
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6437
Number of HSP's successfully gapped in prelim test: 4855
Number of HSP's that attempted gapping in prelim test: 853137
Number of HSP's gapped (non-prelim): 68127
length of query: 577
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 429
effective length of database: 8,886,646,355
effective search space: 3812371286295
effective search space used: 3812371286295
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)