BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008097
(577 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84VG6|PP160_ARATH Pentatricopeptide repeat-containing protein At2g17525,
mitochondrial OS=Arabidopsis thaliana GN=At2g17525 PE=2
SV=2
Length = 626
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 300/515 (58%), Positives = 383/515 (74%), Gaps = 19/515 (3%)
Query: 1 MPHSIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
MP SI PPD++IF+T+IRG GRAR+I V+ DLVS+F + PSLK+FNSILDVLVKED
Sbjct: 102 MPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKED 161
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
ID+AR F+ +KMMASG+ GD YTY ILMKGL LTNR+GDGFKLL +MK+ GV PN+V+YN
Sbjct: 162 IDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYN 221
Query: 121 TLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
TL+H+LCKNGKVGRARSLMS+M+EPNDVTF+ILI AYC E+ L+ ++VLLEK FS GFVP
Sbjct: 222 TLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
DVVT+TKV+E+LC+ GRV +A+E+LE +G LGK++ RF
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
EMERKG LPNV+TYN+LI+ YC+ G+LDSALD FNDMK D I WNF T++TLIRGL G
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
GR DDGLKIL++M+DS RI PYN V+YG Y+EN+ ++ALE+L +MEKLFPRAVDR
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDR 461
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S K++ C G ++D K +DQMI EGGVP++++ CLIH Y Q ++ E+ EL+ +M
Sbjct: 462 SFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVT 521
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
GYLP +STFN V+ G C+Q V +K V EDM RG +P + Y+PL++ LC KG
Sbjct: 522 RGYLPRSSTFNAVIIGFCKQDKVMNGIKFV-EDM--AERGCVPDTESYNPLLEELCVKGD 578
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTT 499
Q A +L +MV K I+PD W+SL+ CLSQ+T
Sbjct: 579 IQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTA 613
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 177/414 (42%), Gaps = 32/414 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T++ L + V +A L+S P+ FN ++ E +
Sbjct: 215 PNAVVYNTLLHALCKN---GKVGRARSLMSEMK-EPNDVTFNILISAYCNEQKLIQSMVL 270
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+K + G D T +M+ LC RV + ++L ++S+G K + V NTL+ C
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GK+ A+ +ME PN T+++LI YC L +AL + + T
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 185 ITKVLELLCSVGRVMDAVEILE-----ESGEQGRL-------------GKVKGGCRFLKE 226
++ L GR D ++ILE ++ R+ + + FL +
Sbjct: 391 FNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLK 450
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
ME+ P + + S CE G +D ++ M +G + + LI G+
Sbjct: 451 MEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGK 508
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
I++ L+++ M G R S +N+V+ G ++++ +++++ M + P
Sbjct: 509 IEESLELINDM--VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESY 566
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
+ + CV G+++ A F +M+E+ VP+ ++ L+ Q+ + S L
Sbjct: 567 NPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 110/290 (37%), Gaps = 78/290 (26%)
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMED--------------------------------- 299
TY L LC R D ++L M D
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 300 -SKEGSKGRISPYNSVLYGLYRE-----------------------------------NQ 323
SK G K + +NS+L L +E N+
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNR 197
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
+ + L+ M+ + P AV + + C +G V A+ +M E PN V ++
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNI 253
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGI 441
LI AYC E+++ ++ L+++ G++P T V+ LC +G V AL+++E R
Sbjct: 254 LISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLE---RVE 310
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+G + L+K C G + A ++M KG LP+ T+N L+
Sbjct: 311 SKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLI 360
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 156/596 (26%), Positives = 280/596 (46%), Gaps = 83/596 (13%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV--KEDIDLARAFYR 69
S+F V++ R +I+ + L P + +N++LD + K +I A +
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF- 193
Query: 70 KKMMASGVQGDDYTYAILMKGLCLT----------------------------------- 94
K+M+ S V + +TY IL++G C
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTF 150
++ DGFKLL M +G++PN + YN +I+ LC+ G++ ++++M ++VT+
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ LI YCKE N ALV+ + G P V+T T ++ +C G + A+E L++
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
+G + G + R L+EM G P+V TYN LI+ +C TG ++
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+ V DMK G+S + V+Y T++ G C +D+ L++ + M + +G K Y+S+
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE--KGIKPDTITYSSL 491
Query: 315 LYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ G + + EA + ++M + L P + I +C++G++E A + ++M+E+G
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT---------------V 417
+P+VV Y LI+ ++ R REA L+ ++ +P T++T +
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSL 611
Query: 418 LSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVG 477
+ G C +G + A ++ E +G+ P Y+ +I C G + A L +MV
Sbjct: 612 IKGFCMKGMMTEADQVFES---MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 478 KGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNH 533
G L +T +L+ L ++ + LN ++ V+ ELS E+ L +NH
Sbjct: 669 SGFLLHTVTVIALVKALHKEGK---VNELNSVIVHVLRSCELSEAEQAKVLVEINH 721
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 226/512 (44%), Gaps = 42/512 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + T+I G + R I+D K ++ + P+L +N +++ L +E +F
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M G D+ TY L+KG C + M G+ P+ + Y +LIHS+CK
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + RA + M PN+ T++ L+ + ++ + A +L + GF P VVT
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ C G++ DA+ +LE+ E+G R V R +EM
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KG P+ TY+ LI +CE A D++ +M G+ + TY LI C G ++
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
L++ M + +G + Y+ ++ GL ++++ EA L ++ E+ P V
Sbjct: 538 KALQLHNEMVE--KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHT 595
Query: 347 ---------------KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
I GFC+ G + +A + F+ M+ + P+ Y+ +IH +C+
Sbjct: 596 LIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
+R+A L KEM G+L T ++ L ++G V ++ +R L +
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSC---ELSEAEQ 712
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPD 483
L++ +G +L +M G LP+
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 125/305 (40%), Gaps = 45/305 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + TV+ G R+ +++ ++ + + P ++S++ KE DL
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
++M+ G+ D++TY L+ C+ + +L + M +GV P+ V Y+ LI
Sbjct: 508 -----YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 124 HSLCKNGKVGRARSLMSDM--EE--PNDVTFSILI--CA-------------YCKEENLV 164
+ L K + A+ L+ + EE P+DVT+ LI C+ +C + +
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A + E PD ++ C G + A + +E + G L +
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 225 KEMERKGCLPNVDTYNILISSYCE----------------TGVLDSALDVFNDMKIDGIS 268
K + ++G + +++ + + CE G +D LDV +M DG
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFL 742
Query: 269 WNFVT 273
N ++
Sbjct: 743 PNGIS 747
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/504 (29%), Positives = 243/504 (48%), Gaps = 31/504 (6%)
Query: 11 ESIFITVIRGLGRARMINDVVKAT-DLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
ES+FI+++R +A + ++ + ++ P+ K +N +L++LV + A
Sbjct: 146 ESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVF 205
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M++ + +T+ ++MK C N + LL M G PNSVIY TLIHSL K
Sbjct: 206 YDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKC 265
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+V A L+ +M P+ TF+ +I CK + + A ++ + GF PD +T
Sbjct: 266 NRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITY 325
Query: 186 TKVLELLCSVGRVMDAVEILEESGE---------------QGRLGKVKGGCRFLKEM-ER 229
++ LC +GRV A ++ + GRL K L +M
Sbjct: 326 GYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKA---VLSDMVTS 382
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G +P+V TYN LI Y + G++ AL+V +DM+ G N +Y L+ G C G+ID+
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
+L M S +G K +N ++ +E++ EA+E ++M + P +
Sbjct: 443 AYNVLNEM--SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
I G C ++ A MI EG V N V Y+ LI+A+ + ++EA +L+ EM G
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
T+N+++ GLCR G V A L E+ +R G P + + LI LC G +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD---GHAPSNISCNILINGLCRSGMVEE 617
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A +MV +G PD +T+NSL+
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLI 641
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 22/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ + ++ G + I++ + +S + P+ FN ++ KE I A
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+R+ M G + D YT+ L+ GLC + + LL M S GV N+V YNTLI++
Sbjct: 482 FRE-MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFL 540
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G++ AR L+++M +++T++ LI C+ + A L EK G P +
Sbjct: 541 RRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNI 600
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ LC G V +AVE +E +G R G+++ G +++
Sbjct: 601 SCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ +G P+ T+N L+S C+ G + A + ++ DG N T+ L++ + +
Sbjct: 661 QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Query: 288 D 288
D
Sbjct: 721 D 721
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 4/161 (2%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARA 66
SP DE + ++I+GL RA ++ + + R PS N +++ L + +
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAV 619
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
++K+M+ G D T+ L+ GLC R+ DG + +++ G+ P++V +NTL+ L
Sbjct: 620 EFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENL 163
CK G V A L+ + E PN T+SIL+ + +E L
Sbjct: 680 CKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
+I GL R+ M+ + V+ + TP + FNS+++ L + I+ +RK + A
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK-LQAE 663
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G+ D T+ LM LC V D LL G PN ++ L+ S+ + R
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRR 723
Query: 136 R 136
R
Sbjct: 724 R 724
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 217/446 (48%), Gaps = 32/446 (7%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDL 63
++ P+ F T+I GL ++ V D + P L + ++++ L K DIDL
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A + KKM ++ D Y ++ LC V D L M ++G++PN V YN+LI
Sbjct: 239 ALSLL-KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LC G+ A L+SDM E PN VTFS LI A+ KE LV A L ++
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
PD+ T + ++ C R+ +A + E M K C PNV TY
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTY 398
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
N LI +C+ ++ +++F +M G+ N VTY+TLI+GL G D KI + M
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM-- 456
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGN 356
+G I Y+ +L GL + + ++AL EYL Q K+ P ++ I G C G
Sbjct: 457 VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL-QKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
VED F + +G PNV+IY +I +C++ EA L +EM G LP + T+NT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIG 442
++ R G+ + +L++E MR G
Sbjct: 576 LIRARLRDGDKAASAELIKE-MRSCG 600
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 215/438 (49%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M Q + T+ L+ GL L N+ + L+ M +RG +P+ Y T+++ LCK G
Sbjct: 175 QMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A SL+ ME E + V ++ +I A C +N+ +AL L + + G P+VVT
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M N VTY+TLI+G C R+++G
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G YN+++ GL++ D A + K+M + + P + S+ +
Sbjct: 415 MELFREM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G +E A F+ + + P++ Y+ +I C+ +V + +L ++ G
Sbjct: 473 DGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P + T++SG CR+G A L E G+LP SG Y+ LI+A G ++
Sbjct: 533 PNVIIYTTMISGFCRKGLKEEADALFREMKED---GTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G + D T
Sbjct: 590 AELIKEMRSCGFVGDAST 607
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 221/462 (47%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + DL + ++M + D Y+Y IL+ C +++
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISL-GERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
+L M G +P+ V ++L++ C ++ A +L+ M +PN VTF+ LI
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ + G PD+ T V+ LC G + A+ +L
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL------------- 243
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
K+ME+ +V Y +I + C ++ AL++F +M GI N VTY++LI
Sbjct: 244 ------KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
R LC+ GR D ++L M + K + +++++ +E + EA EKL+
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPN--VVTFSALIDAFVKEGKLVEA-------EKLY 348
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ I GFC+ +++AK F+ MI + PNVV Y+ LI +C+
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV E EL +EM+ G + T+NT++ GL + G+ A K+ + + + G P
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK---KMVSDGVPPDI 465
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC+ G + A ++ + + PD T+N ++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 187/416 (44%), Gaps = 30/416 (7%)
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSL---MSDME 143
L + + L ++ D L M P+ V +N L+ ++ K K SL M ++
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 144 EPNDV-TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
D+ +++ILI +C+ L AL +L K G+ PD+VT++ +L C R+ +AV
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
++++ F+ E + PN T+N LI A+ + + M
Sbjct: 171 ALVDQ--------------MFVMEYQ-----PNTVTFNTLIHGLFLHNKASEAVALIDRM 211
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
G + TY T++ GLC G ID L +L+ ME K + + Y +++ L
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK--IEADVVIYTTIIDALCNYK 269
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
++AL +M+ + P V + I C G DA R MIE PNVV +
Sbjct: 270 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI A+ +E ++ EA +L EM P T++++++G C + A + E
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE---LM 386
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I + P Y+ LIK C+ + L +M +G++ + +T+N+L+ L Q
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 7/251 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+D+F +M + V ++ L+ + + D + + + M++ + + Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYD--LYSY 118
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N ++ R +Q AL L +M KL P V S + G+C + +A DQM
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
PN V ++ LIH + EA L+ M G P T+ TV++GLC++G++
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L+++ +G + Y+ +I ALC A L +M KGI P+ +T+NS
Sbjct: 239 ALSLLKKMEKGKIEADVV---IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 490 LLICLSQQTTW 500
L+ CL W
Sbjct: 296 LIRCLCNYGRW 306
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 22/297 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ F +I + + + K D + + ++ P + ++S+++ D +D A+
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ + TY L+KG C RV +G +L M RG+ N+V YNTLI L
Sbjct: 383 F-ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD P+ +T+SIL+ CK L ALV+ E PD+
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEM 227
T ++E +C G+V D ++ +G + G CR +EM
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREM 561
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ G LPN TYN LI + G ++ ++ +M+ G + T +I L G
Sbjct: 562 KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 230/455 (50%), Gaps = 46/455 (10%)
Query: 31 VKATDLVSRFN------MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
+KA D V F P++ FN + + K + +L A K+M + G+ YT
Sbjct: 67 IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALC-KQMESKGIAHSIYT 125
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+I++ C ++ F + + G +P++VI+NTL++ LC +V A L+ M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P +T + L+ C + +A+VL+++ GF P+ VT VL ++C G+
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A+E+L ++ME + + Y+I+I C+ G LD+A ++F
Sbjct: 246 LAMELL-------------------RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVL 315
N+M+I G + +TY+TLI G C+ GR DDG K+L+ M K +ISP ++ ++
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM------IKRKISPNVVTFSVLI 340
Query: 316 YGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + EA + LK+M + + P + + I GFC + +E+A + D MI +G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
P+++ ++ LI+ YC+ R+ + EL +EM+ G + T+NT++ G C+ G + A KL
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+E + R P Y L+ LC+ G + A
Sbjct: 461 FQE---MVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 211/429 (49%), Gaps = 31/429 (7%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMA 74
T++ GL ++D V D + P+ + +L+V+ K LA RK M
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK-MEE 256
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
++ D Y+I++ GLC + + F L + M+ +G K + + YNTLI C G+
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
L+ DM + PN VTFS+LI ++ KE L A LL++ G P+ +T +++
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
C R+ +A+++++ M KGC P++ T+NILI+ YC+
Sbjct: 377 GFCKENRLEEAIQMVDL-------------------MISKGCDPDIMTFNILINGYCKAN 417
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+D L++F +M + G+ N VTY+TL++G C G+++ K+ Q M + + I
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR--VRPDIVS 475
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL---GFCVDGNVEDAKRCFDQM 367
Y +L GL + ++ALE ++EK +D + ++ G C V+DA F +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEK-SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+G + Y+ +I C+++ + +A L ++MT G+ P T+N ++ +
Sbjct: 535 PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDA 594
Query: 428 GTALKLVEE 436
TA +L+EE
Sbjct: 595 TTAAELIEE 603
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 25/294 (8%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
S+ I G+ R + ++K +++ R + P+ +NS++D KE+ L A
Sbjct: 337 SVLIDSFVKEGKLREADQLLK--EMMQR-GIAPNTITYNSLIDGFCKEN-RLEEAIQMVD 392
Query: 72 MMAS-GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M S G D T+ IL+ G C NR+ DG +L M RGV N+V YNTL+ C++G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
K+ A+ L +M P+ V++ IL+ C L AL + K D+
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ +C+ +V DA ++ +G R + ++M +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
G P+ TYNILI ++ +A ++ +MK G + T +I L SG
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 226/435 (51%), Gaps = 32/435 (7%)
Query: 88 MKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE--- 144
++ + T + +GFK L M G P+ + TLI C+ GK +A ++ +E
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 145 -PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
P+ +T++++I YCK + NAL +L++ PDVVT +L LC G++ A+E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDR---MSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 204 ILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+L+ ++ R V + L EM +GC P+V TYN+L++ C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G LD A+ NDM G N +T++ ++R +CS GR D K+L M ++G
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM--LRKGFSPS 343
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+ +N ++ L R+ A++ L++M + P ++ + + GFC + ++ A +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
+M+ G P++V Y+ ++ A C++ +V +A E++ +++ G P+ T+NTV+ GL + G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 485
G A+KL++E MR + P + YS L+ L +G A + GI P+ +
Sbjct: 464 KTGKAIKLLDE-MR--AKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAV 520
Query: 486 TWNSLL--ICLSQQT 498
T+NS++ +C S+QT
Sbjct: 521 TFNSIMLGLCKSRQT 535
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 210/446 (47%), Gaps = 62/446 (13%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
SG D TY +++ G C + + +L M V P+ V YNT++ SLC +GK+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+A ++ M + P+ +T++ILI A C++ + +A+ LL++ G PDVVT ++
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 190 ELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
+C GR+ +A+ +FL +M GC PNV T+NI++ S C T
Sbjct: 282 NGICKEGRLDEAI-------------------KFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRIS 309
G A + DM G S + VT++ LI LC G + + IL+ M + G +
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM--PQHGCQPNSL 380
Query: 310 PYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
YN +L+G +E + D A+EYL++M +P V + + C DG VEDA +Q+
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV 427
+G P ++ Y+ +I + + +A +L+ EM P T+++++ GL R+G V
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 428 GTALKLVEEDMRG--------------------------------IGRGSLPGSGHYSPL 455
A+K E R I RG P Y+ L
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 456 IKALCEKGGFQSASMLLVQMVGKGIL 481
I+ L +G + A LL ++ KG++
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLM 586
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 207/427 (48%), Gaps = 27/427 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +I G +A IN+ + D R +++P + +N+IL L
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ D TY IL++ C + VG KLL M+ RG P+ V YN L++ +CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G++ A ++DM +PN +T +I++ + C ++A LL GF P VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEME 228
++ LC G + A++ILE+ + G + K+ +L+ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+GC P++ TYN ++++ C+ G ++ A+++ N + G S +TY+T+I GL G+
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSL 346
+K+L M +K+ I+ Y+S++ GL RE + DEA+++ + E++ P AV +
Sbjct: 467 KAIKLLDEMR-AKDLKPDTIT-YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNS 524
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+LG C + A MI G PN Y LI E +EA EL+ E+ G
Sbjct: 525 IMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Query: 407 YLPIAST 413
+ +S
Sbjct: 585 LMKKSSA 591
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 230/461 (49%), Gaps = 42/461 (9%)
Query: 27 INDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYA 85
+ND + + + + P+ FN + + + + DL F K M +G++ D YT
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFC-KGMELNGIEHDMYTMT 109
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
I++ C ++ F +L G +P+++ ++TL++ C G+V A +L+ M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ VT S LI C + + ALVL+++ +GF PD VT VL LC G A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+++ ++ME + +V Y+I+I S C+ G D AL +FN+
Sbjct: 230 LDLF-------------------RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 262 MKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR-----ISPYNSVLY 316
M++ GI + VTY +LI GLC+ G+ DDG K+L+ M GR + +++++
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM-------IGRNIIPDVVTFSALID 323
Query: 317 GLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
+E + EA E +M + P + + I GFC + + +A + FD M+ +G P
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
++V Y LI++YC+ +RV + L +E++ G +P T+NT++ G C+ G + A +L
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+E + RG P Y L+ LC+ G A + +M
Sbjct: 444 QE---MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 227/499 (45%), Gaps = 38/499 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD F T++ G +++ V D + P L +++++ L +K + A
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M+ G Q D+ TY ++ LC + L M+ R +K + V Y+ +I SLC
Sbjct: 198 I-DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G A SL ++ME + + VT+S LI C + + +L + +PDVV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++++ G++++A E+ EM +G P+ TYN LI
Sbjct: 317 TFSALIDVFVKEGKLLEAKELY-------------------NEMITRGIAPDTITYNSLI 357
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ L A +F+ M G + VTY LI C R+DDG+++ + E S +G
Sbjct: 358 DGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR--EISSKG 415
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
YN+++ G + + + A E ++M + P V + + G C +G + A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F++M + + IY+ +IH C +V +A L ++ G P T+N ++ GL
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 422 CRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGK 478
C++G++ A + ++ED G P Y+ LI+A G S+ L+ +M
Sbjct: 536 CKKGSLSEADMLFRKMKED------GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVC 589
Query: 479 GILPDYLTWNSLLICLSQQ 497
G D T ++ LS +
Sbjct: 590 GFSADSSTIKMVIDMLSDR 608
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 10/300 (3%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
KV + M + LP +N L S+ T D L M+++GI + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM- 334
+I C ++ +L K G + +++++ G E + EA+ + +M
Sbjct: 110 IMINCYCRKKKLLFAFSVLG--RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 335 -EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
K P V S I G C+ G V +A D+M+E G P+ V Y +++ C+
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHY 452
A +L ++M ++ V+ LC+ G+ AL L E +M+GI + Y
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT----Y 283
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMVS 511
S LI LC G + + +L +M+G+ I+PD +T+++L+ ++ L L NEM++
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 154/608 (25%), Positives = 274/608 (45%), Gaps = 104/608 (17%)
Query: 12 SIFITVIRGLGRARMINDVVKATD-LVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRK 70
S F+ +I + + ++++ D ++ F + P +N +L++LV +
Sbjct: 119 STFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHA 178
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPN--------------- 115
KM G++ D T+ +L+K LC +++ +L M S G+ P+
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 116 --------------------SVIYNTLIHSLCKNGKVGRARSLMSDMEE-----PNDVTF 150
+V N ++H CK G+V A + + +M P+ TF
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ CK ++ +A+ +++ G+ PDV T V+ LC +G V +AVE+L++
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 211 QG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDS 254
+ + +V+ + + KG LP+V T+N LI C T
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 255 ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 314
A+++F +M+ G + TY+ LI LCS G++D+ L +L+ ME S G + YN++
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS--GCARSVITYNTL 476
Query: 315 LYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGG 372
+ G + N+ EA E +ME + +V + I G C VEDA + DQMI EG
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 373 VPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALK 432
P+ Y+ L+ +C+ +++A+++++ MT +G P T+ T++SGLC+ G V A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 433 LVEE-DMRGIG--------------------------------RGSLPGSGHYSPLIKAL 459
L+ M+GI + P + Y + + L
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 460 CEKGG-FQSASMLLVQMVGKGILPDYLTWNSL---LICLSQQTTWLLLLLLNEMVSFVMV 515
C GG + A LV+++ KG +P++ + L L+ LS + T L ++V+ VM
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET------LVKLVNMVMQ 710
Query: 516 VHELSAKE 523
S +E
Sbjct: 711 KARFSEEE 718
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 194/417 (46%), Gaps = 31/417 (7%)
Query: 108 KSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL 163
K P +Y ++ L ++G + ++ DM+ E TF ILI +Y + E
Sbjct: 75 KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQ 134
Query: 164 VNALVLLEKSF-SFGFVPDVVTITKVLELLCSVGRVMDAVEILEES----GEQGRLGK-- 216
L +++ FG PD ++L LL G + VEI G + +
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFN 193
Query: 217 --VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+K CR L++M G +P+ T+ ++ Y E G LD AL + M
Sbjct: 194 VLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEF 253
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G SW+ V+ + ++ G C GR++D L +Q M + ++G +N+++ GL +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN-QDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 326 EALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
A+E + M E P + I G C G V++A DQMI PN V Y+ LI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
C+E +V EA+EL + +T G LP TFN+++ GLC N A++L EE MR +
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE-MR--SK 429
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
G P Y+ LI +LC KG A +L QM G +T+N+L+ C + +T
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 213/434 (49%), Gaps = 27/434 (6%)
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M G D +Y+ ++ G C + +KL+ VMK +G+KPNS IY ++I LC+ K
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 132 VGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ A S+M P+ V ++ LI +CK ++ A + S PDV+T T
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 188 VLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKG 231
++ C +G +++A ++ E +G + G +K R M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
C PNV TY LI C+ G LDSA ++ ++M G+ N TY++++ GLC G I++ +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K++ E + G Y +++ + + D+A E LK+M + L P V ++ +
Sbjct: 512 KLVGEFEAA--GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC+ G +ED ++ + M+ +G PN ++ L+ YC ++ A+ + K+M G P
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+ ++ G C+ N+ A L +E M+ G+G YS LIK ++ F A
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQE-MK--GKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 470 MLLVQMVGKGILPD 483
+ QM +G+ D
Sbjct: 687 EVFDQMRREGLAAD 700
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 30/422 (7%)
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV + +Y I++ +C R+ + LL +M+ +G P+ + Y+T+++ C+ G++ +
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L+ M+ +PN + +I C+ L A + G +PD V T +++
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
C + G ++ +F EM + P+V TY +IS +C+ G
Sbjct: 361 FC-------------------KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A +F++M G+ + VT+ LI G C G + D ++ M + G + Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM--IQAGCSPNVVTY 459
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+++ GL +E D A E L +M K L P + + G C GN+E+A + +
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G + V Y L+ AYC+ + +A E++KEM G G P TFN +++G C G +
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
KL+ + +G P + ++ L+K C + ++A+ + M +G+ PD T+ +
Sbjct: 580 GEKLLN---WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 490 LL 491
L+
Sbjct: 637 LV 638
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 181/391 (46%), Gaps = 65/391 (16%)
Query: 111 GVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNA 166
GV N YN +IH +C+ G++ A L+ ME P+ +++S ++ YC+ L
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 167 LVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
L+E G P+ ++ LLC + ++ +A E E
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSE------------------- 341
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
M R+G LP+ Y LI +C+ G + +A F +M I+ + +TY +I G C G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSL 346
+ + K+ M + K +E P +V +
Sbjct: 402 MVEAGKLFHEM--------------------------------FCKGLE---PDSVTFTE 426
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
I G+C G+++DA R + MI+ G PNVV Y LI C+E + A+EL+ EM G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+N++++GLC+ GN+ A+KLV E + G+ ++ Y+ L+ A C+ G
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT----YTTLMDAYCKSGEM 542
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL--ICL 494
A +L +M+GKG+ P +T+N L+ CL
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 198/436 (45%), Gaps = 60/436 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ I+ ++I L R + + +A + R + P ++ +++D K DI A F
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M + + D TY ++ G C + + KL H M +G++P+SV + LI+ C
Sbjct: 374 FYE-MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G + A + + M + PN VT++ LI CKE +L +A LL + + G P++
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ LC G + +AV++ + E E G + TY L+
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKL-------------------VGEFEAAGLNADTVTYTTLM 533
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+YC++G +D A ++ +M G+ VT++ L+ G C G ++DG K+L M
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML----- 588
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
+KG I+P + L ++ +C+ N++ A
Sbjct: 589 AKG-IAPNATTFNSLVKQ-----------------------------YCIRNNLKAATAI 618
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+ M G P+ Y+ L+ +C+ ++EA L +EM G G+ ST++ ++ G +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 424 QGNVGTALKLVEEDMR 439
+ A ++ ++ R
Sbjct: 679 RKKFLEAREVFDQMRR 694
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 146/301 (48%), Gaps = 22/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F +I G +A + D + + + + +P++ + +++D L KE D+D A
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M G+Q + +TY ++ GLC + + + KL+ ++ G+ ++V Y TL+ + C
Sbjct: 479 LHE-MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K+G++ +A+ ++ +M +P VTF++L+ +C L + LL + G P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 184 TITKVLELLCSVGRVMDAVEILEES-----GEQGRLGK--VKGGCR---------FLKEM 227
T +++ C + A I ++ G G+ + VKG C+ +EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ KG +V TY++LI + + A +VF+ M+ +G++ + +D G R
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRP 717
Query: 288 D 288
D
Sbjct: 718 D 718
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 221/440 (50%), Gaps = 64/440 (14%)
Query: 55 VLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP 114
L+KE+ + K+M+ +Q + +T+ +++ LC T ++ ++ MK G P
Sbjct: 197 ALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSP 256
Query: 115 NSVIYNTLIHSLCK---NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNAL 167
N V YNTLI CK NGK+ +A +++ +M E PN TF+ILI + K++NL ++
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 168 VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEM 227
+ ++ P+V++ ++ LC+ G++ +A+ + ++ M
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDK-------------------M 357
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
G PN+ TYN LI+ +C+ +L ALD+F +K G Y+ LI C G+I
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DDG + + ME +EG + YN ++ GL
Sbjct: 418 DDGFALKEEME--REGIVPDVGTYNCLIAGL----------------------------- 446
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
C +GN+E AK+ FDQ+ +G +P++V + L+ YC++ R+A+ L+KEM+ G
Sbjct: 447 ----CRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+N V+ G C++GN+ A + + M R + Y+ L++ +KG +
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQ-MEKERRLRM-NVASYNVLLQGYSQKGKLED 559
Query: 468 ASMLLVQMVGKGILPDYLTW 487
A+MLL +M+ KG++P+ +T+
Sbjct: 560 ANMLLNEMLEKGLVPNRITY 579
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 55/345 (15%)
Query: 144 EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
+PN TF+++I A CK + A ++E +G P+VV+ +++ C +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL-------- 271
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
G G++ K LKEM PN+ T+NILI + + L ++ VF +M
Sbjct: 272 -----GGNGKMYKADA---VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 264 IDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ N ++Y++LI GLC+GG+I + + + M + G + + YN++
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA--GVQPNLITYNAL--------- 372
Query: 324 QDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
I GFC + +++A F + +G VP +Y+ LI
Sbjct: 373 ------------------------INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
AYC+ ++ + L +EM G +P T+N +++GLCR GN+ A KL ++ +
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ----LTS 464
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
LP + L++ C KG + A+MLL +M G+ P +LT+N
Sbjct: 465 KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 47/308 (15%)
Query: 41 NMTPSLKIFNSILDVLVKEDI--------------DLARAF-YRKKMMASGVQGDDYTYA 85
N+ S+K+F +LD VK ++ ++ A R KM+++GVQ + TY
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE- 144
L+ G C + + + + +K +G P + +YN LI + CK GK+ +L +ME
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 145 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
P+ T++ LI C+ N+ A L ++ S G +PD+VT ++E C
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYC-------- 481
Query: 202 VEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
R G+ + LKEM + G P TYNI++ YC+ G L +A ++
Sbjct: 482 -----------RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 262 M-KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYR 320
M K + N +Y+ L++G G+++D +L M + KG + N + Y + +
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLE-----KGLVP--NRITYEIVK 583
Query: 321 ENQQDEAL 328
E D+
Sbjct: 584 EEMVDQGF 591
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 155/540 (28%), Positives = 249/540 (46%), Gaps = 61/540 (11%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +FI+VI + + V+ + F PS+KI+N +LD L+ E+ I + YR
Sbjct: 111 EDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
M G + + +TY +L+K LC N+V KLL M ++G P++V Y T+I S+C+
Sbjct: 171 D-MKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 130 GKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
G V R L ++ EP ++ LI CKE + A L+ + G P+V++ + ++
Sbjct: 230 GLVKEGREL-AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 190 ELLCSVGRVMDAVEILEESGEQG------RLGKVKGGCRFLK-----------EMERK-G 231
+LC+ G++ A L + ++G L + GC FL+ +M R G
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC-FLRGTTFDALDLWNQMIRGFG 347
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
PNV YN L+ +C G + A+ VF+ M+ G S N TY +LI G G +D +
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
I M S G + Y +++ L R ++ EA ++ M E P + I
Sbjct: 408 YIWNKMLTS--GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G ++ A++ F QM ++ PN+V Y+ L+ + R+ EA L +E+ G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEE-------------------------------- 436
+ST+NT+L G C G G AL+LV +
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 437 -DMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
D+ GR P Y+ +I LC + +LL +M+ GI+P TW+ L+ C
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 198/418 (47%), Gaps = 32/418 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P S++ +I GL + + + ++P++ ++++++VL I+LA +F
Sbjct: 244 PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSF 303
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM-KSRGVKPNSVIYNTLIHSL 126
+M+ G + YT + L+KG L D L + M + G++PN V YNTL+
Sbjct: 304 L-TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
C +G + +A S+ S MEE PN T+ LI + K +L A+ + K + G P+V
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGC---------RFLKE 226
V T ++E LC + +A ++E ++ V KG C + ++
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 227 MERKG-CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
ME++ C PN+ TYN L+ + ++ A + ++ + G+ W+ TY+TL+ G C+ G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 286 RIDDGLKIL-QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM----EKLFPR 340
L+++ ++M D K S I+ N ++ ++ + + A + L + K P
Sbjct: 543 LPGIALQLVGKMMVDGK--SPDEIT-MNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
+ + I G C ED ++MI G VP++ + LI+ + ++ VR +
Sbjct: 600 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDIVRAHDQF 657
Score = 89.4 bits (220), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 15/277 (5%)
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
T+ ++I G +DS + MK+ G + D I + ++ + +++
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH---CSEDLFISVISVYRQVGLAERAVEMF 134
Query: 298 EDSKE-GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
KE G + YN VL L EN+ + M++ P ++ + C +
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
V+ AK+ +M +G P+ V Y +I + C+ V+E EL + + P+ S +
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSVY 249
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +++GLC++ + A +L+ E + +G P YS LI LC G + A L Q
Sbjct: 250 NALINGLCKEHDYKGAFELMRE---MVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 475 MVGKGILPDYLTWNSLLI-CLSQQTTWLLLLLLNEMV 510
M+ +G P+ T +SL+ C + TT+ L L N+M+
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI 343
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 208/450 (46%), Gaps = 33/450 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL R ++ V D + P L + +++ L K DIDLA +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KKM ++ Y ++ LC V D L M ++G++PN V YN+LI LC
Sbjct: 244 L-KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTFS LI A+ KE LV A L ++ PD+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A + E M K C PNV TYN LI
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTYNTLI 403
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ +D +++F +M G+ N VTY TLI G D+ + + M +G
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM--VSDG 461
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I Y+ +L GL + + AL EYL Q K+ P ++ I G C G VED
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYL-QRSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G PNVV Y ++ +C++ EA L +EM G LP + T+NT++
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 421 LCRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 581 HLRDGDKAASAELIREMRSCRFVGDASTIG 610
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 225/496 (45%), Gaps = 34/496 (6%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DI 61
++S P SI F ++ + + + V+ + + ++ +L ++ +++ + +
Sbjct: 73 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL 132
Query: 62 DLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
LA A KMM G + D T L+ G C NR+ D L+ M G +P+S +NT
Sbjct: 133 SLALAVL-AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
LIH L ++ + A +L+ M +P+ VT+ I++ CK ++ AL LL+K
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
P VV +++ LC+ V DA+ + EM+ KG PNV
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLF-------------------TEMDNKGIRPNVV 292
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TYN LI C G A + +DM I+ N VT+ LI G++ + K+ M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
K I Y+S++ G ++ DEA + M + FP V + I GFC
Sbjct: 353 --IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
V++ F +M + G V N V Y LIH + Q A + K+M G LP T++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+L GLC G V TAL + E R P Y+ +I+ +C+ G + L +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKME---PDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 476 VGKGILPDYLTWNSLL 491
KG+ P+ +T+ +++
Sbjct: 528 SLKGVKPNVVTYTTMM 543
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+++F DM + V + L+ + + D + + + M++ G + Y
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--GISHNLYTY 119
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+ ++ R +Q AL L +M KL P V + + GFC + DA QM+E
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+ ++ LIH + R EA L+ M G P T+ V++GLC++G++
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 430 ALKLVEEDMRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL L+++ + +G + PG Y+ +I ALC A L +M KGI P+ +T+N
Sbjct: 240 ALSLLKK----MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 489 SLLICLSQQTTW 500
SL+ CL W
Sbjct: 296 SLIRCLCNYGRW 307
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D ++DA F M++ P++V + L+ A + + L ++M G T
Sbjct: 59 DLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ +++ CR+ + AL ++ + M+ G P + L+ C A L+
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMK---LGYEPDIVTLNSLLNGFCHGNRISDAVSLVG 175
Query: 474 QMVGKGILPDYLTWNSLL 491
QMV G PD T+N+L+
Sbjct: 176 QMVEMGYQPDSFTFNTLI 193
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/442 (30%), Positives = 210/442 (47%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P L + ++++ L K DIDLA +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KKM ++ D Y ++ GLC + D L M ++G++P+ Y++LI LC
Sbjct: 246 L-KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTFS LI A+ KE LV A L ++ PD+
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A + E M K C PNV TY+ LI
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTYSTLI 405
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ ++ +++F +M G+ N VTY TLI G D+ + + M G
Sbjct: 406 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM--VSVG 463
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN +L GL + + +A+ EYL Q + P ++ I G C G VED
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYL-QRSTMEPDIYTYNIMIEGMCKAGKVEDG 522
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G PNV+ Y+ +I +C++ EA L+K+M G LP + T+NT++
Sbjct: 523 WELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA 582
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 583 RLRDGDREASAELIKE-MRSCG 603
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 218/441 (49%), Gaps = 33/441 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D +T+ L+ GL L N+ + L+ M RG +P+ V Y T+++ LCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A SL+ ME E + V ++ +I CK +++ +AL L + + G PDV T +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M N VTY TLI+G C R+++G
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKI 348
+++ + M S+ G G Y ++++G ++ D A KQM + P + ++ +
Sbjct: 418 MELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G + A F+ + P++ Y+ +I C+ +V + EL ++ G
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVS 535
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P +NT++SG CR+G+ A LK ++ED G LP SG Y+ LI+A G
Sbjct: 536 PNVIAYNTMISGFCRKGSKEEADSLLKKMKED------GPLPNSGTYNTLIRARLRDGDR 589
Query: 466 QSASMLLVQMVGKGILPDYLT 486
++++ L+ +M G D T
Sbjct: 590 EASAELIKEMRSCGFAGDAST 610
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 229/502 (45%), Gaps = 36/502 (7%)
Query: 19 RGLGRARMINDVVKATDLVSRF-NMT-----PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
R + R R+ +D++K D V F +M PS+ FN +L + K + ++M
Sbjct: 51 REILRNRL-SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D YTY+I + C +++ +L M G +P+ V ++L++ C + ++
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +L+ M E P+ TF+ LI A+ L+++ G PD+VT V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGK--------VKGGCRF---------LKEMERKG 231
+ LC G + A+ +L++ E+G++ + G C++ EM+ KG
Sbjct: 230 VNGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 232 CLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGL 291
P+V TY+ LIS C G A + +DM I+ N VT+ LI G++ +
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 292 KILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKIL 349
K+ M K I Y+S++ G ++ DEA + M + FP V S I
Sbjct: 349 KLYDEM--IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 350 GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
GFC VE+ F +M + G V N V Y LIH + Q A + K+M G P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 410 IASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
T+N +L GLC+ G + A+ + E R P Y+ +I+ +C+ G +
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME---PDIYTYNIMIEGMCKAGKVEDGW 523
Query: 470 MLLVQMVGKGILPDYLTWNSLL 491
L + KG+ P+ + +N+++
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMI 545
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 125/275 (45%), Gaps = 7/275 (2%)
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
ER + D IL + + +D A+D+F DM + V ++ L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+ + + + M+ G + Y+ + R +Q AL L +M KL P V S
Sbjct: 100 ELVISLGEQMQ--TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+C + DA DQM+E G P+ + LIH + EA L+ +M
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+ TV++GLC++G++ AL L+++ +G + Y+ +I LC+
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV---IYNTIIDGLCKYKHM 274
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
A L +M KGI PD T++SL+ CL W
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 23/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
P+ F +I + + + K D + + ++ P + ++S+++ D +D A+
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ + TY+ L+KG C RV +G +L M RG+ N+V Y TLIH
Sbjct: 386 F-ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A+ + M PN +T++IL+ CK L A+V+ E PD+
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D E+ +G V G CR LK+M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LPN TYN LI + G +++ ++ +M+ G + + T L+ + GR+
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 623
Query: 288 D 288
D
Sbjct: 624 D 624
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 226/455 (49%), Gaps = 46/455 (10%)
Query: 31 VKATDLVSRFN------MTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
+KA D + F P++ F+ + + K + DL A K+M G+ + YT
Sbjct: 67 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALC-KQMELKGIAHNLYT 125
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+I++ C ++ F + + G +PN++ ++TLI+ LC G+V A L+ M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P+ +T + L+ C A++L++K +G P+ VT VL ++C G+
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A+E+L ++ME + + Y+I+I C+ G LD+A ++F
Sbjct: 246 LAMELL-------------------RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVL 315
N+M++ GI+ N +TY+ LI G C+ GR DDG K+L+ M K +I+P ++ ++
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM------IKRKINPNVVTFSVLI 340
Query: 316 YGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV 373
+E + EA E K+M + P + + I GFC + +++ A + D M+ +G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 374 PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
PN+ ++ LI+ YC+ R+ + EL ++M+ G + T+NT++ G C G + A +L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 434 VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+E + R P Y L+ LC+ G + A
Sbjct: 461 FQE---MVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 217/454 (47%), Gaps = 26/454 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F T+I GL +++ ++ D + P L N++++ L +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ G Q + TY ++ +C + + +LL M+ R +K ++V Y+ +I LCK
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + A +L ++ME N +T++ILI +C + LL P+VVT
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEME 228
+ +++ G++ +A E+ +E +G + G C+ + M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN+ T+NILI+ YC+ +D L++F M + G+ + VTY+TLI+G C G+++
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD---RS 345
++ Q M K I Y +L GL + ++ALE +++EK +D +
Sbjct: 456 VAKELFQEMVSRK--VPPNIVTYKILLDGLCDNGESEKALEIFEKIEK-SKMELDIGIYN 512
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C V+DA F + +G P V Y+ +I C++ + EA L ++M
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
G+ P T+N ++ G+ ++KL+EE R
Sbjct: 573 GHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 206/436 (47%), Gaps = 26/436 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD T++ GL + + + D + + P+ + +L+V+ K LA
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M ++ D Y+I++ GLC + + F L + M+ +G+ N + YN LI C
Sbjct: 251 LRK-MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ L+ DM + PN VTFS+LI ++ KE L A L ++ G PD +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTI 369
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T T +++ C + A ++++ +G + ++ G ++M
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+G + + TYN LI +CE G L+ A ++F +M + N VTY L+ GLC G
Sbjct: 430 SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGES 489
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ--MEKLFPRAVDRS 345
+ L+I + +E SK + I YN +++G+ ++ D+A + ++ + P +
Sbjct: 490 EKALEIFEKIEKSK--MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C G + +A+ F +M E+G P+ Y+ LI A+ + ++ +L++E+
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 406 GYLPIASTFNTVLSGL 421
G+ AST V+ L
Sbjct: 608 GFSVDASTIKMVIDML 623
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 118/264 (44%), Gaps = 22/264 (8%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P + S++D KE+ +D A M++ G + T+ IL+ G C NR+ DG
Sbjct: 364 IAPDTITYTSLIDGFCKENHLDKANQMV-DLMVSKGCDPNIRTFNILINGYCKANRIDDG 422
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+L M RGV ++V YNTLI C+ GK+ A+ L +M PN VT+ IL+
Sbjct: 423 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDG 482
Query: 157 YCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK 216
C AL + EK D+ ++ +C+ +V DA ++ +G
Sbjct: 483 LCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPG 542
Query: 217 VK-------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFN 260
VK G C+ ++ME G P+ TYNILI ++ G ++ +
Sbjct: 543 VKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIE 602
Query: 261 DMKIDGISWNFVTYDTLIRGLCSG 284
++K G S + T +I L G
Sbjct: 603 ELKRCGFSVDASTIKMVIDMLSDG 626
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 212/449 (47%), Gaps = 31/449 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K DIDLA
Sbjct: 113 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M A+ ++ D + ++ LC V D L M+++G++PN V Y++LI LC
Sbjct: 173 LNK-MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE V A L + PD+
Sbjct: 232 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C RL K K F M K C P++DTYN LI
Sbjct: 292 TYNSLINGFCM----------------HDRLDKAKQMFEF---MVSKDCFPDLDTYNTLI 332
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C++ ++ ++F +M G+ + VTY TLI+GL G D+ K+ + M +G
Sbjct: 333 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM--VSDG 390
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I Y+ +L GL + ++ALE M+K + + I G C G V+D
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNVV Y+ +I C + ++EA L+K+M G LP + T+NT++
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 422 CRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDASTIG 539
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 33/430 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 105 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 164
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L++ ME E + V F+ +I + CK ++ +AL L ++ + G P+VVT +
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LCS GR DA ++L + E+ + GK + +M ++
Sbjct: 225 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR 284
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TYN LI+ +C LD A +F M + TY+TLI+G C R++DG
Sbjct: 285 SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDG 344
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ + M S G G Y +++ GL+ + D A + KQM + + P + S+ +
Sbjct: 345 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A FD M + ++ IY +I C+ +V + +L ++ G
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A LK ++ED G LP SG Y+ LI+A G
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKED------GPLPDSGTYNTLIRAHLRDGDK 516
Query: 466 QSASMLLVQM 475
+++ L+ +M
Sbjct: 517 AASAELIREM 526
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 213/462 (46%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + DL + +KM G+ + YTY IL+ C +++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISL-GEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M G +P+ V ++L++ C ++ A +L+ M E P+ +TF+ LI
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ G P++VT V+ LC G + A +L +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNK----------- 175
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME +V +N +I S C+ +D AL++F +M+ GI N VTY +LI
Sbjct: 176 --------MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LCS GR D ++L M + K + +N+++ +E + EA EKL
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPN--LVTFNALIDAFVKEGKFVEA-------EKLH 278
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ I GFC+ ++ AK+ F+ M+ + P++ Y+ LI +C+
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV + +EL +EM+ G + T+ T++ GL G+ A K+ ++ + G P
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDI 395
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC G + A + M I D + +++
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 42/270 (15%)
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
LP++ +N L+S+ + D + + M+ GIS N TY+ LI C
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC---------- 56
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILG 350
R +Q AL L +M KL P V S + G
Sbjct: 57 ---------------------------RRSQISLALALLGKMMKLGYEPSIVTLSSLLNG 89
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+C + DA DQM+E G P+ + + LIH + EA L+ M G P
Sbjct: 90 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
T+ V++GLC++G++ A L+ + + ++ +I +LC+ A
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALN 206
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
L +M KGI P+ +T++SL+ CL W
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M++ +P++ ++ L+ A + ++ L ++M G T+N +++ CR+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L+ + M+ G P S L+ C A L+ QMV G PD +T
Sbjct: 61 ISLALALLGKMMK---LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 117
Query: 487 WNSLL 491
+ +L+
Sbjct: 118 FTTLI 122
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 243/506 (48%), Gaps = 29/506 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARAF 67
PD +F T I + + + VK + + P++ FN+++D L + D A F
Sbjct: 271 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 330
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++KM+ G++ TY+IL+KGL R+GD + +L M +G PN ++YN LI S
Sbjct: 331 -KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 389
Query: 128 KNGKVGRA---RSLM-SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G + +A + LM S T++ LI YCK NA LL++ S GF +
Sbjct: 390 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 449
Query: 184 TITKVLELLCSVGRVMDAVEILEE------SGEQGRLGK-VKGGCRFLKEME-------- 228
+ T V+ LLCS A+ + E S G L + G C+ K +
Sbjct: 450 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 509
Query: 229 -RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG + + T N L+ CE G LD A + ++ G + V+Y+TLI G C ++
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
D+ L M K G K Y+ ++ GL+ N+ +EA+++ ++ + P S
Sbjct: 570 DEAFMFLDEM--VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYS 627
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C E+ + FD+M+ + PN V+Y+ LI AYC+ R+ A EL ++M
Sbjct: 628 VMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHK 687
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P ++T+ +++ G+ V A KL+ E+MR G P HY+ LI + G
Sbjct: 688 GISPNSATYTSLIKGMSIISRVEEA-KLLFEEMR--MEGLEPNVFHYTALIDGYGKLGQM 744
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
LL +M K + P+ +T+ ++
Sbjct: 745 VKVECLLREMHSKNVHPNKITYTVMI 770
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 211/507 (41%), Gaps = 63/507 (12%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
M PS N +L LV+ + + + ++ GV D Y + + C +V +
Sbjct: 235 MFPSKTTCNILLTSLVRAN-EFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAV 293
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAY 157
KL M+ GV PN V +NT+I L G+ A M EP +T+SIL+
Sbjct: 294 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 353
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----- 212
+ + + +A +L++ GF P+V+ +++ G + A+EI + +G
Sbjct: 354 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 413
Query: 213 -----------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFND 261
+ G+ R LKEM G N ++ +I C + DSAL +
Sbjct: 414 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 262 MKIDGIS-------------------------W------NFV----TYDTLIRGLCSGGR 286
M + +S W FV T + L+ GLC G+
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDR 344
+D+ +I + E G YN+++ G + + DEA +L +M K L P
Sbjct: 534 LDEAFRIQK--EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 591
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S+ I G VE+A + +D G +P+V Y +I C+ ER E E EM
Sbjct: 592 SILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
P +N ++ CR G + AL+L EDM+ +G P S Y+ LIK +
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALEL-REDMK--HKGISPNSATYTSLIKGMSIISR 708
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A +L +M +G+ P+ + +L+
Sbjct: 709 VEEAKLLFEEMRMEGLEPNVFHYTALI 735
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 184/397 (46%), Gaps = 32/397 (8%)
Query: 110 RGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVN 165
+GV P+ ++ T I++ CK GKV A L S MEE PN VTF+ +I
Sbjct: 267 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 326
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLK 225
A + EK G P ++T + +++ L R+ DA +L K
Sbjct: 327 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVL-------------------K 367
Query: 226 EMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGG 285
EM +KG PNV YN LI S+ E G L+ A+++ + M G+S TY+TLI+G C G
Sbjct: 368 EMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNG 427
Query: 286 RIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
+ D+ ++L+ M G + SV+ L D AL ++ +M + P
Sbjct: 428 QADNAERLLKEMLSI--GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGL 485
Query: 344 RSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMT 403
+ I G C G A + Q + +G V + + L+H C+ ++ EA + KE+
Sbjct: 486 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL 545
Query: 404 GHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKG 463
G G + ++NT++SG C + + A ++E ++ RG P + YS LI L
Sbjct: 546 GRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK---RGLKPDNYTYSILICGLFNMN 602
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQT 498
+ A G+LPD T++ ++ C +++T
Sbjct: 603 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERT 639
Score = 95.5 bits (236), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 25/223 (11%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ D YTY++++ G C R +G + M S+ V+PN+V+YN LI + C++G++
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L DM+ PN T++ LI + A +L E+ G P+V T +++
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGK-VKGGCRFLKEMERKGCLPNVDTYNILISSYCET 249
G+LG+ VK C L+EM K PN TY ++I Y
Sbjct: 737 -------------------GYGKLGQMVKVEC-LLREMHSKNVHPNKITYTVMIGGYARD 776
Query: 250 GVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
G + A + N+M+ GI + +TY I G G + + K
Sbjct: 777 GNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/515 (25%), Positives = 241/515 (46%), Gaps = 47/515 (9%)
Query: 12 SIFITVIRGLGRARMINDVVKATDLV-SRF-NMTPSLKIFNSILDVLVKEDIDLARAFYR 69
S ++V+ ++ I+ LV SRF PS+ ++N +L+ +KE ++
Sbjct: 76 SSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
K M+ G+ YT+ +L++ LC ++ V +L M +G KPN + L+ CK
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
G + L++ ME PN V ++ ++ ++C+E ++ ++EK G VPD+VT
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+ LC G+V+DA I + LG + PN TYN+++
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPR---------------PNSITYNLMLKG 300
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+C+ G+L+ A +F ++ + + +Y+ ++GL G+ + +L+ M D +G
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD--KGIG 358
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRC 363
I YN ++ GL + +A + M++ + P AV + G+C G V+ AK
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
+M+ +PN + L+H+ + R+ EA EL+++M GY T N ++ GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGH---------------------YSPLIKALCEK 462
G + A+++V + MR G +L G+ YS L+ LC+
Sbjct: 479 SGELDKAIEIV-KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKA 537
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G F A L +M+G+ + PD + +N + +Q
Sbjct: 538 GRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 231/500 (46%), Gaps = 56/500 (11%)
Query: 42 MTPSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDG 100
+ P FN ++ L +D AR + +M G + +++T+ IL++G C G
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELF-DEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 101 FKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICA 156
+LL+ M+S GV PN VIYNT++ S C+ G+ + ++ M E P+ VTF+ I A
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 157 YCKEENLVNALVL---LEKSFSFGFV-PDVVTITKVLELLCSVGRVMDAVEILEESGE-- 210
CKE +++A + +E G P+ +T +L+ C VG + DA + E E
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 211 ------------QG--RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
QG R GK LK+M KG P++ +YNIL+ C+ G+L A
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLY 316
+ MK +G+ + VTY L+ G CS G++D +LQ M + N +L+
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM--MRNNCLPNAYTCNILLH 439
Query: 317 GLYRENQQDEALEYLKQM-EKLFP-RAVDRSLKILGFCVDGNVEDAKRCF---------- 364
L++ + EA E L++M EK + V ++ + G C G ++ A
Sbjct: 440 SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA 499
Query: 365 -------------DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
D +IE +P+++ Y L++ C+ R EA L EM G P +
Sbjct: 500 LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDS 559
Query: 412 STFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASML 471
+N + C+QG + +A +++ +DM +G Y+ LI L K L
Sbjct: 560 VAYNIFIHHFCKQGKISSAFRVL-KDME--KKGCHKSLETYNSLILGLGIKNQIFEIHGL 616
Query: 472 LVQMVGKGILPDYLTWNSLL 491
+ +M KGI P+ T+N+ +
Sbjct: 617 MDEMKEKGISPNICTYNTAI 636
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 227/485 (46%), Gaps = 24/485 (4%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +++G + ++ D + + + SL+ +N L LV+ +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M G+ Y+Y ILM GLC + D ++ +MK GV P++V Y L+H C
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
GKV A+SL+ +M PN T +IL+ + K + A LL K G+ D VT
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 185 ITKVLELLCSVGRVMDAVEILE-----ESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTY 239
+++ LC G + A+EI++ S G LG G +E CLP++ TY
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN-NCLPDLITY 527
Query: 240 NILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
+ L++ C+ G A ++F +M + + + V Y+ I C G+I ++L+ ME
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME- 586
Query: 300 SKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNV 357
K+G + YNS++ GL +NQ E + +M++ + P + I C V
Sbjct: 587 -KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 358 EDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---ERVREASELMKEMTGHGYLPIASTF 414
EDA D+M+++ PNV + LI A+C+ + +E E + G + F
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMF 705
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
N +L+ G LK E + RG G+ Y L+++LC+K + AS +L +
Sbjct: 706 NELLAA-------GQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHK 758
Query: 475 MVGKG 479
M+ +G
Sbjct: 759 MIDRG 763
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 229/507 (45%), Gaps = 39/507 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+E F ++RG +A + + ++ + + F + P+ I+N+I+ +E +
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKM 239
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGV----KPNSVIYNTLIH 124
+KM G+ D T+ + LC +V D ++ M+ +PNS+ YN ++
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299
Query: 125 SLCKNGKVGRARSLMSDMEEPNDV----TFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
CK G + A++L + E +D+ +++I + + + A +L++ G P
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFL 224
+ + +++ LC +G + DA I+ G +GKV L
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+EM R CLPN T NIL+ S + G + A ++ M G + VT + ++ GLC
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR 344
G +D ++I++ M + G + NS + GL D +E P +
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLG--NSYI-GLV----DDSLIE-----NNCLPDLITY 527
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
S + G C G +AK F +M+ E P+ V Y+ IH +C++ ++ A ++K+M
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
G T+N+++ GL + + L++E +G P Y+ I+ LCE
Sbjct: 588 KGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE---KGISPNICTYNTAIQYLCEGEK 644
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLL 491
+ A+ LL +M+ K I P+ ++ L+
Sbjct: 645 VEDATNLLDEMMQKNIAPNVFSFKYLI 671
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 216/430 (50%), Gaps = 33/430 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A +L++ ME E + V F+ +I + CK ++ +AL L ++ + G P+VVT +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LCS GR DA ++L + E+ + GK + +M ++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TYN L++ +C LD A +F M + VTY+TLI+G C R++DG
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
++ + M S G G Y +++ GL+ + D A + KQM + + P + S+ +
Sbjct: 420 TELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A FD M + ++ IY +I C+ +V + +L ++ G
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A LK ++ED G LP SG Y+ LI+A G
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKED------GPLPNSGTYNTLIRAHLRDGDK 591
Query: 466 QSASMLLVQM 475
+++ L+ +M
Sbjct: 592 AASAELIREM 601
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 210/449 (46%), Gaps = 31/449 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K D DLA
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A+ ++ D + ++ LC V D L M+++G++PN V Y++LI LC
Sbjct: 248 L-NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 306
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE V A L + PD+
Sbjct: 307 SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIF 366
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C RL K K F M K C P+V TYN LI
Sbjct: 367 TYNSLVNGFCM----------------HDRLDKAKQMFEF---MVSKDCFPDVVTYNTLI 407
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C++ ++ ++F +M G+ + VTY TLI+GL G D+ K+ + M +G
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM--VSDG 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I Y+ +L GL + ++ALE M+K + + I G C G V+D
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNVV Y+ +I C + ++EA L+K+M G LP + T+NT++
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 422 CRQGNVGTALKLVEE--DMRGIGRGSLPG 448
R G+ + +L+ E R +G S G
Sbjct: 586 LRDGDKAASAELIREMRSCRFVGDASTIG 614
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 212/462 (45%), Gaps = 46/462 (9%)
Query: 44 PSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ FN +L + K + D+ + K V G YTY IL+ C +++
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL-YTYNILINCFCRRSQISLALA 141
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
LL M G +P+ V ++L++ C ++ A +L+ M E P+ +TF+ LI
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
A+ L+++ G P++VT V+ LC G A+ +L +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK----------- 250
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME +V +N +I S C+ +D AL++F +M+ GI N VTY +LI
Sbjct: 251 --------MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLF 338
LCS GR D ++L M + K + +N+++ +E + EA EKL+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPN--LVTFNALIDAFVKEGKFVEA-------EKLY 353
Query: 339 PRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
+ RS+ + GFC+ ++ AK+ F+ M+ + P+VV Y+ LI +C+
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV + +EL +EM+ G + T+ T++ GL G+ A K+ ++ + G P
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ---MVSDGVPPDI 470
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
YS L+ LC G + A + M I D + +++
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN ++ R +Q AL L +M KL P V S + G+C + DA DQM+
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
E G P+ + + LIH + EA L+ M G P T+ V++GLC++G+
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
AL L+ + + ++ +I +LC+ A L +M KGI P+ +T++
Sbjct: 243 LALNLLNKMEAAKIEADVV---IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 489 SLLICLSQQTTW 500
SL+ CL W
Sbjct: 300 SLISCLCSYGRW 311
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/501 (26%), Positives = 243/501 (48%), Gaps = 30/501 (5%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKM 72
+ T++ L R +++++ + + + P++ +N +++ K +++ A Y K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQ-YVSKI 244
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ +G+ D +TY L+ G C + FK+ + M +G + N V Y LIH LC ++
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L M++ P T+++LI + C E AL L+++ G P++ T T +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEMERKGC 232
++ LCS + A E+L + E+G + V G C+ ++ ME +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 233 LPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK 292
PN TYN LI YC++ V A+ V N M + + VTY++LI G C G D +
Sbjct: 425 SPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 293 ILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILG 350
+L LM D G Y S++ L + + +EA + +E+ + P V + I G
Sbjct: 484 LLSLMND--RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
+C G V++A ++M+ + +PN + ++ LIH C + +++EA+ L ++M G P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
ST ++ L + G+ A ++ + G+ P + Y+ I+ C +G A
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQ---MLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 471 LLVQMVGKGILPDYLTWNSLL 491
++ +M G+ PD T++SL+
Sbjct: 659 MMAKMRENGVSPDLFTYSSLI 679
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 216/479 (45%), Gaps = 35/479 (7%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKI--FNSILDVLVKED-IDLARAFYR 69
+ I +G A + D+ + + RF + L I +N++L+ L + +D + Y
Sbjct: 148 LMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYM 207
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M+ V + YTY ++ G C V + + + + G+ P+ Y +LI C+
Sbjct: 208 E-MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQR 266
Query: 130 GKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
+ A + ++M N+V ++ LI C + A+ L K P V T
Sbjct: 267 KDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T +++ LC R +A+ ++ KEME G PN+ TY +LI S
Sbjct: 327 TVLIKSLCGSERKSEALNLV-------------------KEMEETGIKPNIHTYTVLIDS 367
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
C + A ++ M G+ N +TY+ LI G C G I+D + +++LME K
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRC 363
R YN ++ G + N +A+ L +M K+ P V + I G C GN + A R
Sbjct: 428 TRT--YNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 364 FDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
M + G VP+ Y +I + C+ +RV EA +L + G P + ++ G C+
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 424 QGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G V A ++E + + + LP S ++ LI LC G + A++L +MV G+ P
Sbjct: 545 AGKVDEAHLMLE---KMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 233/510 (45%), Gaps = 55/510 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFN---MTPSLKIFNSILDVLVKEDIDLARA 66
+E + +I GL AR I++ A DL + P+++ + ++ L +
Sbjct: 287 NEVAYTHLIHGLCVARRIDE---AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
K+M +G++ + +TY +L+ LC + +LL M +G+ PN + YN LI+
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK G + A ++ ME PN T++ LI YCK N+ A+ +L K +PDV
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDV 462
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT +++ C R G R L M +G +P+ TY +
Sbjct: 463 VTYNSLIDGQC-------------------RSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I S C++ ++ A D+F+ ++ G++ N V Y LI G C G++D+ +L+ M SK
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML-SKN 562
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
++ +N++++GL + + EA ++M K L P ++ I DG+ + A
Sbjct: 563 CLPNSLT-FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F QM+ G P+ Y I YC+E R+ +A ++M +M +G P T+++++ G
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCE------KGG---------- 464
G A +++ MR G P + LIK L E KG
Sbjct: 682 YGDLGQTNFAFDVLKR-MRDT--GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 465 --FQSASMLLVQMVGKGILPDYLTWNSLLI 492
F + LL +MV + P+ ++ L++
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 210/456 (46%), Gaps = 40/456 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I G + MI D V +L+ ++P+ + +N ++ K ++ A
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M+ V D TY L+ G C + ++LL +M RG+ P+ Y ++I SLCK
Sbjct: 451 NK-MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ +V A L +E+ PN V ++ LI YCK + A ++LEK S +P+ +T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------------RL---GKVKGGCRFLKEME 228
++ LC+ G++ +A + E+ + G RL G ++M
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G P+ TY I +YC G L A D+ M+ +G+S + TY +LI+G G+ +
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 289 DGLKILQLMEDSK----------------EGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+L+ M D+ E G+ L + + D +E L+
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 333 QM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQE 389
+M + P A ILG C GN+ A++ FD M G+ P+ ++++ L+ C+
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
++ EA++++ +M G+LP + ++ GL ++G
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 7/274 (2%)
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN L++S G++D V+ +M D + N TY+ ++ G C G +++ + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR--AVDRSLKILGFCVDGN 356
++ G Y S++ G + D A + +M R V + I G CV
Sbjct: 246 EA--GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
+++A F +M ++ P V Y LI + C ER EA L+KEM G P T+
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTV 363
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ LC Q A +L+ + + +G +P Y+ LI C++G + A ++ M
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLE---KGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 477 GKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMV 510
+ + P+ T+N L+ + + +LN+M+
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 454
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 130/347 (37%), Gaps = 76/347 (21%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ F +I GL + + + + + + P++ ++ L+K D D A+
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK-DGDFDHAYS 623
Query: 69 R-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
R ++M++SG + D +TY ++ C R+ D ++ M+ GV P+ Y++LI
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILI------------------CAYCKEENLVN 165
G+ A ++ M EP+ TF LI CA
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDT 743
Query: 166 ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG------------- 212
+ LLEK P+ + K++ +C VG + A ++ +
Sbjct: 744 VVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALL 803
Query: 213 ----RLGKVKGGCRFLKEMERKGCLPNVDT------------------------------ 238
+L K + + +M G LP +++
Sbjct: 804 SCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYY 863
Query: 239 -----YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+ I+I + G++++ ++FN M+ +G ++ TY LI G
Sbjct: 864 EDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 211/443 (47%), Gaps = 36/443 (8%)
Query: 26 MINDVVKATDL---VSRFN------MTPSLKIFNSILDVLV-KEDIDLARAFYRKKMMAS 75
+IN V++ L +S FN P FN +L +V + +F+ + S
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN--KS 157
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
V D Y++ IL+KG C + F LL + G PN VIY TLI CK G++ +A
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ L +M + N+ T+++LI K + EK G P++ T V+
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 192 LCSVGRVMDAVEILEESGEQG------RLGKVKGG-CRFLK---------EMERKGCLPN 235
LC GR DA ++ +E E+G + GG CR +K +M+ G PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TYN LI +C G L AL + D+K G+S + VTY+ L+ G C G K+++
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCV 353
ME+ G K Y ++ R + ++A++ ME+L P S+ I GFC+
Sbjct: 398 EMEE--RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G + +A R F M+E+ PN VIY+ +I YC+E A +L+KEM P ++
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVAS 515
Query: 414 FNTVLSGLCRQGNVGTALKLVEE 436
+ ++ LC++ A +LVE+
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEK 538
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 202/453 (44%), Gaps = 57/453 (12%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +++ + + + M G P S +N L+ + + + S ++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 144 EP---NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMD 200
+ +F ILI C+ + + LL + FGF P+VV T +++ C G +
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 201 AVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
A ++ E G+ G + G K G ++M+ G PN+ TYN +++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS---- 300
C+ G A VF++M+ G+S N VTY+TLI GLC ++++ K++ M+
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 301 ----------------KEGS--------KGR-ISP----YNSVLYGLYRENQQDEALEYL 331
K G K R +SP YN ++ G R+ A + +
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
K+ME+ + P V ++ I F N+E A + M E G VP+V Y LIH +C +
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
++ EAS L K M P +NT++ G C++G+ ALKL++E + P
Sbjct: 457 GQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE---KELAPNV 513
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
Y +I+ LC++ + A L+ +M+ GI P
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 125 bits (315), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 8/271 (2%)
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F E + K L +V ++ ILI CE G ++ + D+ ++ G S N V Y TLI G C
Sbjct: 151 FFNENKSKVVL-DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPR 340
G I+ + E K G Y ++ GL++ + + E ++M++ +FP
Sbjct: 210 KKGEIEKAKDLF--FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + C DG +DA + FD+M E G N+V Y+ LI C+E ++ EA++++
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G P T+NT++ G C G +G AL L D++ RG P Y+ L+ C
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC-RDLK--SRGLSPSLVTYNILVSGFC 384
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
KG A+ ++ +M +GI P +T+ L+
Sbjct: 385 RKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 152/328 (46%), Gaps = 30/328 (9%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE--DIDLARAF 67
+E + +I GL + + + + + + P+L +N +++ L K+ D + F
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+M GV + TY L+ GLC ++ + K++ MKS G+ PN + YNTLI C
Sbjct: 292 --DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
GK+G+A SL D++ P+ VT++IL+ +C++ + A ++++ G P V
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEM 227
T T +++ + A+++ E G + G++ R K M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
K C PN YN +I YC+ G AL + +M+ ++ N +Y +I LC +
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVL 315
+ ++++ M DS I P S+L
Sbjct: 530 KEAERLVEKMIDSG------IDPSTSIL 551
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+Y+ +I++Y Q + + + EM +G++P ++ FN +L+ + + E+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ + + LIK CE G + + LL+++ G P+ + + +L+
Sbjct: 156 KSKV----VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 219/438 (50%), Gaps = 27/438 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M +G Q + T+ L+ GL L N+ + L+ M ++G +P+ V Y +++ LCK G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
A +L++ ME EP + ++ +I CK +++ +AL L ++ + G P+VVT +
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L + E+ + GK+ + EM ++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M + VTY+TLI+G C R+++G
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G YN ++ GL++ D A E K+M + + P + + +
Sbjct: 416 MEVFREM--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A F+ + P + Y+ +I C+ +V + +L ++ G
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
P +NT++SG CR+G+ A L +E G+LP SG Y+ LI+A G +++
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKED---GTLPNSGCYNTLIRARLRDGDREAS 590
Query: 469 SMLLVQMVGKGILPDYLT 486
+ L+ +M G D T
Sbjct: 591 AELIKEMRSCGFAGDAST 608
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 211/442 (47%), Gaps = 32/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P+ F T+I GL ++ + D + P L + +++ L K D DLA
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM ++ Y ++ GLC + D L M+++G++PN V Y++LI LC
Sbjct: 244 L-NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E P+ TFS LI A+ KE LV A L ++ P +V
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A ++ E M K C P+V TYN LI
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEF-------------------MVSKHCFPDVVTYNTLI 403
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+C+ ++ ++VF +M G+ N VTY+ LI+GL G D +I + M +G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM--VSDG 461
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ I G C G VED
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G P+VV Y+ +I +C++ EA L KEM G LP + +NT++
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R G+ + +L++E MR G
Sbjct: 581 RLRDGDREASAELIKE-MRSCG 601
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 216/471 (45%), Gaps = 29/471 (6%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ F+ +L + K + ++M G+ + YTY+IL+ C +++ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCK 159
L M G +PN V ++L++ C + ++ A +L+ M +PN VTF+ LI
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGK--- 216
A+ L+++ + G PD+VT V+ LC G A +L + EQG+L
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVL 257
Query: 217 -----VKGGCRF---------LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
+ G C++ KEME KG PNV TY+ LIS C G A + +DM
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
I+ + T+ LI G++ + K+ M K I Y+S++ G +
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHD 375
Query: 323 QQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DEA + + M + FP V + I GFC VE+ F +M + G V N V Y+
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
LI Q A E+ KEM G P T+NT+L GLC+ G + A+ + E R
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 441 IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ +I+ +C+ G + L + KG+ PD + +N+++
Sbjct: 496 KME---PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 192/440 (43%), Gaps = 41/440 (9%)
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F+R+ SG DY + GL ++ D L M P+ + ++ L+ ++
Sbjct: 35 FWRRAF--SGKTSYDYREKLSRNGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 91
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K K SL M+ N T+SILI +C+ L AL +L K G+ P++
Sbjct: 92 AKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNI 151
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
VT++ +L C R+ +AV ++++ M G PN T+N L
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQ-------------------MFVTGYQPNTVTFNTL 192
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I A+ + + M G + VTY ++ GLC G D +L ME
Sbjct: 193 IHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME---- 248
Query: 303 GSKGRISP----YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGN 356
+G++ P YN+++ GL + D+AL K+ME + P V S I C G
Sbjct: 249 --QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
DA R MIE P+V + LI A+ +E ++ EA +L EM P T+++
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
+++G C + A ++ E + + P Y+ LIK C+ + + +M
Sbjct: 367 LINGFCMHDRLDEAKQMFE---FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 477 GKGILPDYLTWNSLLICLSQ 496
+G++ + +T+N L+ L Q
Sbjct: 424 QRGLVGNTVTYNILIQGLFQ 443
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 23/301 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAF 67
PD F +I + + + K D + + ++ PS+ ++S+++ D +D A+
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + M++ D TY L+KG C RV +G ++ M RG+ N+V YN LI L
Sbjct: 384 F-EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 128 KNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A + ++SD PN +T++ L+ CK L A+V+ E P +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEM 227
T ++E +C G+V D ++ +G V G CR KEM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
+ G LPN YN LI + G +++ ++ +M+ G + + T L+ + GR+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRL 621
Query: 288 D 288
D
Sbjct: 622 D 622
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 116/288 (40%), Gaps = 44/288 (15%)
Query: 216 KVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYD 275
K+ EM + P++ ++ L+S+ + D + + M+ GI N TY
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 276 TLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME 335
LI C R +Q AL L +M
Sbjct: 121 ILINCFC-------------------------------------RRSQLPLALAVLGKMM 143
Query: 336 KL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVR 393
KL P V S + G+C + +A DQM G PN V ++ LIH +
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 394 EASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL-PGSGHY 452
EA L+ M G P T+ V++GLC++G+ A L+ + + +G L PG Y
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK----MEQGKLEPGVLIY 259
Query: 453 SPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ +I LC+ A L +M KGI P+ +T++SL+ CL W
Sbjct: 260 NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 39/189 (20%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PP+ + T++ GL + + + + + R M P++
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY-------------------- 502
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
TY I+++G+C +V DG+ L + +GVKP+ V YNT+I C
Sbjct: 503 ---------------TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ G A +L +M+E PN ++ LI A ++ + + L+++ S GF D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 184 TITKVLELL 192
TI V +L
Sbjct: 608 TIGLVTNML 616
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 183/370 (49%), Gaps = 27/370 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KMM G + T+ L+ G CL NR+GD F L+ +M G +PN V+YNTLI LCKNG
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
++ A L+++ME+ + VT++ L+ C +A +L PDVVT T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
++++ G + +A E+ KEM + PN TYN +I+
Sbjct: 251 ALIDVFVKQGNLDEAQELY-------------------KEMIQSSVDPNNVTYNSIINGL 291
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C G L A F+ M G N VTY+TLI G C +D+G+K+ Q M S EG
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM--SCEGFNA 349
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
I YN++++G + + AL+ M ++ P + + + G CV+G +E A F
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
D M E +V Y+ +IH C+ ++V +A EL + G P A T+ ++ GLC+
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 425 GNVGTALKLV 434
G A +L+
Sbjct: 470 GPRREADELI 479
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 182/413 (44%), Gaps = 47/413 (11%)
Query: 64 ARAF--YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNT 121
ARAF YR+K L G + R D F L M P+ V +
Sbjct: 32 ARAFSDYREK---------------LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTR 76
Query: 122 LIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFG 177
L+ + + ME + +F+ILI +C+ L AL +L K G
Sbjct: 77 LLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLG 136
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVD 237
+ P +VT +L C V R+ DA ++ M + G PNV
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLV-------------------ILMVKSGYEPNVV 177
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
YN LI C+ G L+ AL++ N+M+ G+ + VTY+TL+ GLC GR D ++L+ M
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDG 355
K + + +++ ++ DEA E K+M + P V + I G C+ G
Sbjct: 238 --MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ DAK+ FD M +G PNVV Y+ LI +C+ V E +L + M+ G+ T+N
Sbjct: 296 RLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
T++ G C+ G + AL + + R P + L+ LC G +SA
Sbjct: 356 TLIHGYCQVGKLRVALDIF---CWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 32/281 (11%)
Query: 24 ARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDY 82
ARM+ D++K + + P + F +++DV VK+ ++D A+ Y K+M+ S V ++
Sbjct: 231 ARMLRDMMKRS-------INPDVVTFTALIDVFVKQGNLDEAQELY-KEMIQSSVDPNNV 282
Query: 83 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM 142
TY ++ GLC+ R+ D K +M S+G PN V YNTLI CK V L M
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 143 E----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRV 198
+ T++ LI YC+ L AL + S PD++T +L LC G +
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 199 MDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
A+ ++ ++E E+ + YNI+I C+ ++ A ++
Sbjct: 403 ESALVKFDD----------------MRESEK---YIGIVAYNIMIHGLCKADKVEKAWEL 443
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED 299
F + ++G+ + TY +I GLC G + ++++ M++
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 126/303 (41%), Gaps = 42/303 (13%)
Query: 226 EMERKGCLPNV-----------------------------------DTYNILISSYCETG 250
EM LP++ ++ ILI +C
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
L AL V M G + VT+ +L+ G C RI D ++ LM K G + +
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM--VKSGYEPNVVV 178
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
YN+++ GL + + + ALE L +MEK L V + + G C G DA R M+
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
+ P+VV + LI + ++ + EA EL KEM P T+N++++GLC G +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 429 TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A K D+ +G P Y+ LI C+ L +M +G D T+N
Sbjct: 299 DAKKTF--DLMA-SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYN 355
Query: 489 SLL 491
+L+
Sbjct: 356 TLI 358
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 364 FDQMIEEGGVP-NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F Q +E G+ ++ + LIH +C+ R+ A ++ +M GY P TF ++L G C
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+G A LV + + G P Y+ LI LC+ G A LL +M KG+
Sbjct: 153 LVNRIGDAFSLV---ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGA 209
Query: 483 DYLTWNSLLICLSQQTTW 500
D +T+N+LL L W
Sbjct: 210 DVVTYNTLLTGLCYSGRW 227
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 222/452 (49%), Gaps = 40/452 (8%)
Query: 28 NDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAI 86
+D V ++R P L F+ + V+ + + DL K+M G+ + YT +I
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC-KQMELKGIAHNLYTLSI 112
Query: 87 LMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE-- 144
++ C ++ F + + G +P++V ++TLI+ LC G+V A L+ M E
Sbjct: 113 MINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMG 172
Query: 145 --PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAV 202
P +T + L+ C + +A++L+++ GF P+ VT VL+++C G+ A+
Sbjct: 173 HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 203 EILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
E+ L++ME + + Y+I+I C+ G LD+A ++FN+M
Sbjct: 233 EL-------------------LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGL 318
+I G + + Y TLIRG C GR DDG K+L+ M K +I+P +++++
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM------IKRKITPDVVAFSALIDCF 327
Query: 319 YRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNV 376
+E + EA E K+M + P V + I GFC + ++ A D M+ +G PN+
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ LI+ YC+ + + EL ++M+ G + T+NT++ G C G + A +L +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSA 468
+ R P Y L+ LC+ G + A
Sbjct: 448 ---MVSRRVRPDIVSYKILLDGLCDNGEPEKA 476
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 222/454 (48%), Gaps = 26/454 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F T+I GL +++ ++ D + P+L N++++ L
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+M+ +G Q ++ TY ++K +C + + +LL M+ R +K ++V Y+ +I LCK
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+G + A +L ++ME + + + ++ LI +C + LL PDVV
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------RLGKVKGGCR---------FLKEME 228
+ +++ G++ +A E+ +E ++G + G C+ L M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
KGC PN+ T+NILI+ YC+ ++D L++F M + G+ + VTY+TLI+G C G+++
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVD---RS 345
++ Q M + + I Y +L GL + ++ALE +++EK +D +
Sbjct: 440 VAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK-SKMELDIGIYN 496
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ I G C V+DA F + +G P+V Y+ +I C++ + EA L ++M
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
G+ P T+N ++ +G+ + KL+EE R
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 160 bits (404), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 202/444 (45%), Gaps = 29/444 (6%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
K++ G + D T++ L+ GLCL RV + +L+ M G KP + N L++ LC NG
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
KV A L+ M E PN+VT+ ++ CK A+ LL K D V +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
+++ LC G + +A + E +G G+ G + L++M ++
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+V ++ LI + + G L A ++ +M GIS + VTY +LI G C ++D
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+L LM +G I +N ++ G + N D+ LE ++M + V + I
Sbjct: 372 NHMLDLM--VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
GFC G +E AK F +M+ P++V Y L+ C +A E+ +++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 409 PIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+N ++ G+C V A L ++G+ P Y+ +I LC+KG
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK----PDVKTYNIMIGGLCKKGSLSE 545
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A +L +M G P+ T+N L+
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILI 569
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 138/302 (45%), Gaps = 38/302 (12%)
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
K+ME KG N+ T +I+I+ C L A + G + VT+ TLI GLC
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 285 GRIDDGLKILQLMEDSKEGS--------------KGRIS-------------------PY 311
GR+ + L+++ M + G++S Y
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 312 NSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
VL + + Q A+E L++ME K+ AV S+ I G C DG++++A F++M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G +++IY LI +C R + ++L+++M P F+ ++ ++G +
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L +E I RG P + Y+ LI C++ A+ +L MV KG P+ T+N
Sbjct: 336 AEELHKE---MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 490 LL 491
L+
Sbjct: 393 LI 394
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 133/328 (40%), Gaps = 57/328 (17%)
Query: 13 IFITVIRGLGRARMINDVVKA-TDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKK 71
I+ T+IRG A +D K D++ R +TP + F++++D VKE K+
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 72 MMASGVQGDDYTYA-----------------------------------ILMKGLCLTNR 96
M+ G+ D TY IL+ G C N
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 97 VGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSI 152
+ DG +L M RGV ++V YNTLI C+ GK+ A+ L +M P+ V++ I
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 153 LICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG 212
L+ C AL + EK D+ ++ +C+ +V DA ++ +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 213 RLGKVK-------GGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSAL 256
VK G C+ ++ME G PN TYNILI ++ G +
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 257 DVFNDMKIDGISWNFVTYDTLIRGLCSG 284
+ ++K G S + T ++ L G
Sbjct: 583 KLIEEIKRCGFSVDASTVKMVVDMLSDG 610
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 77/190 (40%), Gaps = 40/190 (21%)
Query: 353 VDGNVEDAKRCFDQMIEEGGVP-----------------------------------NVV 377
VD +DA F +M P N+
Sbjct: 49 VDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLY 108
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
+I+ C+ ++ A M ++ GY P TF+T+++GLC +G V AL+LV+
Sbjct: 109 TLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD-- 166
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLS 495
R + G P + L+ LC G A +L+ +MV G P+ +T+ +L +C S
Sbjct: 167 -RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 496 QQTTWLLLLL 505
QT + LL
Sbjct: 226 GQTALAMELL 235
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/445 (28%), Positives = 217/445 (48%), Gaps = 37/445 (8%)
Query: 77 VQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRAR 136
V D+ TY ++K + R+ D +LL MK G+ PN V YN L++ CK G + A
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295
Query: 137 SLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELL 192
++ M++ P+ T++ILI C ++ L L++ S PDVVT +++
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
Query: 193 CSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM-ERKGCLPN 235
+G ++A +++E+ G + K + R +KE+ + G P+
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPD 415
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
+ TY+ LI +Y + G L AL++ +M GI N +T +T++ LC ++D+ +L
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 296 LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCV 353
K G Y +++ G +RE + ++ALE +M+K + P + I G C
Sbjct: 476 --SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
G E A FD++ E G +P+ ++ +I YC+E RV +A E E H + P T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 414 FNTVLSGLCRQGNVGTALK----LVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSAS 469
N +L+GLC++G AL L+EE R + + Y+ +I A C+ + A
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEE--REVDTVT------YNTMISAFCKDKKLKEAY 645
Query: 470 MLLVQMVGKGILPDYLTWNSLLICL 494
LL +M KG+ PD T+NS + L
Sbjct: 646 DLLSEMEEKGLEPDRFTYNSFISLL 670
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 226/457 (49%), Gaps = 38/457 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + T+++ + + ++D+ + + + + P+ +N+++ K L AF
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG-SLKEAFQ 296
Query: 69 RKKMM-ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++M + V D TY IL+ GLC + +G +L+ MKS ++P+ V YNTLI
Sbjct: 297 IVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENL------VNALVLLEKSFSFG 177
+ G AR LM ME + N VT +I + CKEE V LV + G
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH-----G 411
Query: 178 FVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGC 221
F PD+VT +++ VG + A+E++ E G++G + K+
Sbjct: 412 FSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAH 471
Query: 222 RFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
L ++G + + TY LI + ++ AL+++++MK I+ T+++LI GL
Sbjct: 472 NLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
C G+ + L + + E ++ G S +NS++ G +E + ++A E+ + K +
Sbjct: 532 CHHGKTE--LAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 342 VDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELM 399
+ + IL G C +G E A F+ +IEE V + V Y+ +I A+C++++++EA +L+
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 400 KEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
EM G P T+N+ +S L G + +L+++
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 195/436 (44%), Gaps = 64/436 (14%)
Query: 100 GFKLLHVMKSRGVKPNSVIYNTLIHSLCK---NGKVGRARSLMSDMEEP----NDVTFSI 152
++ M +KPN + NTL+ L + + + AR + DM + N TF++
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 153 LICAYCKEENLVNALVLLEKSFS-FGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
L+ YC E L +AL +LE+ S F PD VT +L+ + GR+ D E+L
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL------ 263
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
+M++ G +PN TYN L+ YC+ G L A + MK + +
Sbjct: 264 -------------LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
TY+ LI GLC+ G + +GL+++ M+ K + + YN+++ G + EA + +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLK--LQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 332 KQMEKLFPRA--VDRSLKILGFCVDGNVEDAKRCFDQMIE-EGGVPNVVIYDCLIHAYCQ 388
+QME +A V ++ + C + E R ++++ G P++V Y LI AY +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRG-----IG 442
+ A E+M+EM G T NT+L LC++ + A L+ RG +
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 443 RGSL--------------------------PGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
G+L P ++ LI LC G + A ++
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 477 GKGILPDYLTWNSLLI 492
G+LPD T+NS+++
Sbjct: 549 ESGLLPDDSTFNSIIL 564
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 146/287 (50%), Gaps = 18/287 (6%)
Query: 215 GKVKGGCRFLKEMERKGCLPNVDTYNILI---SSYCETGVLDSALDVFNDMKIDGISWNF 271
GK + ++M R PN+ T N L+ Y + + SA +VF+DM G+S N
Sbjct: 145 GKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNV 204
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA 327
T++ L+ G C G+++D L +L+ M S+ +++P YN++L + ++ + +
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERM-----VSEFKVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 328 LEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E L M+K L P V + + G+C G++++A + + M + +P++ Y+ LI+
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILING 319
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
C +RE ELM M P T+NT++ G G A KL+E+ M G +
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ-MENDGVKA 378
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVG-KGILPDYLTWNSLL 491
+ + S +K LC++ ++ + + ++V G PD +T+++L+
Sbjct: 379 NQVTHNIS--LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 158/358 (44%), Gaps = 27/358 (7%)
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
P+ F I + AY E AL + +K P+++T +L +G V
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL-----IGLVRYPSSF 183
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ +M + G NV T+N+L++ YC G L+ AL + M
Sbjct: 184 -----------SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS 232
Query: 265 D-GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQ 323
+ ++ + VTY+T+++ + GR+ D LK L L++ K G YN+++YG +
Sbjct: 233 EFKVNPDNVTYNTILKAMSKKGRLSD-LKEL-LLDMKKNGLVPNRVTYNNLVYGYCKLGS 290
Query: 324 QDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDC 381
EA + ++ M++ + P ++ I G C G++ + D M P+VV Y+
Sbjct: 291 LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNT 350
Query: 382 LIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMR 439
LI + EA +LM++M G T N L LC++ + V+E DM
Sbjct: 351 LIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH 410
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
G P Y LIKA + G A ++ +M KGI + +T N++L L ++
Sbjct: 411 GFS----PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKE 464
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 179 bits (454), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 215/473 (45%), Gaps = 36/473 (7%)
Query: 43 TPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
P++ +N++L K+ A M + GV D TY +L+ LC +NR+ G+
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
LL M+ R + PN V YNTLI+ GKV A L+++M PN VTF+ LI +
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
E N AL + + G P V+ +L+ LC + +
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC----------------KNAEFDLAR 388
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
G F M+R G TY +I C+ G LD A+ + N+M DGI + VTY LI
Sbjct: 389 G---FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
G C GR +I+ + G I Y++++Y R EA+ + M E
Sbjct: 446 NGFCKVGRFKTAKEIVCRIYRVGLSPNGII--YSTLIYNCCRMGCLKEAIRIYEAMILEG 503
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
++ + C G V +A+ M +G +PN V +DCLI+ Y +A
Sbjct: 504 HTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAF 563
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH---YS 453
+ EMT G+ P T+ ++L GLC+ G++ A K ++ ++P + Y+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS------LHAVPAAVDTVMYN 617
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLL 506
L+ A+C+ G A L +MV + ILPD T+ SL+ L ++ ++ +L
Sbjct: 618 TLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF 670
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 225/512 (43%), Gaps = 38/512 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSR---FNMTPSLKIFNSILDVLVKED--IDL 63
P+E + T+I G V+ A+ L++ F ++P+ FN+++D + E +
Sbjct: 296 PNEVTYNTLINGFSNE---GKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 352
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
+ FY M A G+ + +Y +L+ GLC MK GV + Y +I
Sbjct: 353 LKMFYM--MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
LCKNG + A L+++M +P+ VT+S LI +CK A ++ + + G
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P+ + + ++ C +G + +A+ I E +G + GKV F
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
++ M G LPN +++ LI+ Y +G A VF++M G F TY +L++GLC
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRA 341
GG + + K L+ + + YN++L + + +A+ +M + P +
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVM--YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMK 400
+ I G C G A + G V PN V+Y C + + + + +
Sbjct: 649 YTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFRE 708
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
+M G+ P T N ++ G R G + L+ E G G P Y+ L+
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPE--MGNQNGG-PNLTTYNILLHGYS 765
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLI 492
++ ++ +L ++ GILPD LT +SL++
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVL 797
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 26/348 (7%)
Query: 146 NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEIL 205
N + ILI Y +E + ++L + +GF P V T +L G V+
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAIL------GSVV------ 169
Query: 206 EESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKID 265
+SGE + FLKEM ++ P+V T+NILI+ C G + + + M+
Sbjct: 170 -KSGEDVSVWS------FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKS 222
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + VTY+T++ C GR +++L M+ +G + YN +++ L R N+
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS--KGVDADVCTYNMLIHDLCRSNRIA 280
Query: 326 EALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ L+ M K + P V + I GF +G V A + ++M+ G PN V ++ LI
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI 340
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR 443
+ E +EA ++ M G P ++ +L GLC+ A MR
Sbjct: 341 DGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY---MRMKRN 397
Query: 444 GSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G G Y+ +I LC+ G A +LL +M GI PD +T+++L+
Sbjct: 398 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 213/483 (44%), Gaps = 71/483 (14%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M G +TY L+KGLC + + K L + + ++V+YNTL+ ++CK+G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 131 KVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV-PDVVTI 185
+ +A SL +M + P+ T++ LI C++ V A++ +++ + G V P+ V
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMER 229
T ++ + G+ + E+ G R+GK++ L EM
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+ PN+ TYNIL+ Y + + ++ ++ + ++GI + +T +L+ G+C ++
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 290 GLKILQL--------------MEDSKEGSKGRIS-------------------PYNSVLY 316
GLKIL+ M SK + G I+ ++++
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 317 GLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 374
L R ++ E+ L +M K + P + I G C G+++ A ++MI P
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
V ++ A + + EA+ L++ M +P ++F T++ C+ GNV AL+L
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL- 986
Query: 435 EEDMRGIGRGSLPGSG------HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
R + G Y+ LI LC KG A L +M G G L + T+
Sbjct: 987 --------RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYK 1038
Query: 489 SLL 491
+L+
Sbjct: 1039 ALI 1041
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 225/552 (40%), Gaps = 85/552 (15%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTP-----SLKIFNSILDVLVKED 60
PD + +I G GR + ++V + R ++P S I+N +KE
Sbjct: 436 PDIVTYSALINGFCKVGRFKTAKEIVCR---IYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSV--- 117
I + A M+ G D +T+ +L+ LC +V + + + M S G+ PN+V
Sbjct: 493 IRIYEA-----MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 118 --------------------------------IYNTLIHSLCKNGKVGRA----RSLMSD 141
Y +L+ LCK G + A +SL +
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607
Query: 142 MEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+ V ++ L+ A CK NL A+ L + +PD T T ++ LC G+ + A
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 667
Query: 202 VEILEESGEQG-----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ +E+ +G + G+ K G F ++M+ G P++ T N +I
Sbjct: 668 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 727
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y G ++ D+ +M N TY+ L+ G R D L G
Sbjct: 728 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSK--RKDVSTSFLLYRSIILNGI 785
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRA--VDR---SLKILGFCVDGNVED 359
+S++ G+ N + L+ LK R VDR ++ I C +G +
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKA---FICRGVEVDRYTFNMLISKCCANGEINW 842
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A M G + D ++ + R +E+ ++ EM+ G P + + +++
Sbjct: 843 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
GLCR G++ TA +V+E+M I P + S +++AL + G A++LL M+
Sbjct: 903 GLCRVGDIKTAF-VVKEEM--IAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 959
Query: 480 ILPDYLTWNSLL 491
++P ++ +L+
Sbjct: 960 LVPTIASFTTLM 971
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 222/491 (45%), Gaps = 33/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK--EDIDLARA 66
P +F + L M+ + ++ + RF + P + N +L K + D+ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F K M+ +G + +TY I++ +C V L MK RG+ P++V YN++I
Sbjct: 250 F--KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 127 CKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G++ +M+ EP+ +T++ LI +CK L L + G P+V
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V+ + +++ C G + A+ +F +M R G +PN TY L
Sbjct: 368 VSYSTLVDAFCKEGMMQQAI-------------------KFYVDMRRVGLVPNEYTYTSL 408
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + C+ G L A + N+M G+ WN VTY LI GLC R+ + ++ M+ +
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA-- 466
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G ++ YN++++G + D ALE L +++ + P + I G C +E A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
K ++M E G N +IY L+ AY + E L+ EM TF ++ G
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 421 LCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
LC+ V A+ G + + ++ +I LC+ ++A+ L QMV KG+
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQA--NAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 481 LPDYLTWNSLL 491
+PD + SL+
Sbjct: 645 VPDRTAYTSLM 655
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 225/482 (46%), Gaps = 39/482 (8%)
Query: 34 TDLVSRF-------NMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYA 85
TD V RF P++ +N ++D + KE D++ AR + ++M G+ D TY
Sbjct: 243 TDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF-EEMKFRGLVPDTVTYN 301
Query: 86 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME-- 143
++ G R+ D MK +P+ + YN LI+ CK GK+ +M+
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN 361
Query: 144 --EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDA 201
+PN V++S L+ A+CKE + A+ G VP+ T T +++ C +G + DA
Sbjct: 362 GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA 421
Query: 202 VEILEESGEQG-------RLGKVKGGC---------RFLKEMERKGCLPNVDTYNILISS 245
+ E + G + G C +M+ G +PN+ +YN LI
Sbjct: 422 FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHG 481
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSK 305
+ + +D AL++ N++K GI + + Y T I GLCS +I+ ++ M++ G K
Sbjct: 482 FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC--GIK 539
Query: 306 GRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRC 363
Y +++ ++ E L L +M++L + +L G C + V A
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDY 599
Query: 364 FDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
F+++ + G+ N I+ +I C++ +V A+ L ++M G +P + + +++ G
Sbjct: 600 FNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNF 659
Query: 423 RQGNVGTALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
+QGNV AL L + M IG + L Y+ L+ L Q A L +M+G+GI
Sbjct: 660 KQGNVLEALAL-RDKMAEIGMKLDLLA---YTSLVWGLSHCNQLQKARSFLEEMIGEGIH 715
Query: 482 PD 483
PD
Sbjct: 716 PD 717
Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 194/449 (43%), Gaps = 68/449 (15%)
Query: 50 NSILD--VLVKEDIDLARAFYR-KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
NS+L VL K D D+ + + + G D +++L+ + + +
Sbjct: 162 NSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLID----LGMLEEAIQCFSK 217
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
MK V P + N L+H K GK + DM P T++I+I CKE +
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A L E+ G VPD VT +++ VGR+ D V C
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV------------------C- 318
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F +EM+ C P+V TYN LI+ +C+ G L L+ + +MK +G+ N V+Y TL+ C
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAV 342
G + +K M R+ L E + +
Sbjct: 379 KEGMMQQAIKFYVDMR--------RVG---------------------LVPNEYTYTSLI 409
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
D + KI GN+ DA R ++M++ G NVV Y LI C ER++EA EL +M
Sbjct: 410 DANCKI------GNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
G +P +++N ++ G + N+ AL+L+ E GRG P Y I LC
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK---GRGIKPDLLLYGTFIWGLCSL 520
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
++A +++ +M GI + L + +L+
Sbjct: 521 EKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 172/398 (43%), Gaps = 26/398 (6%)
Query: 42 MTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGF 101
+ P++ +++++D KE + + M G+ ++YTY L+ C + D F
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 102 KLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAY 157
+L + M GV+ N V Y LI LC ++ A L M+ PN +++ LI +
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 158 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKV 217
K +N+ AL LL + G PD++ + LCS L K+
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS-------------------LEKI 523
Query: 218 KGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTL 277
+ + EM+ G N Y L+ +Y ++G L + ++MK I VT+ L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 278 IRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--E 335
I GLC + + + + G + + + +++ GL ++NQ + A +QM +
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDF-GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Query: 336 KLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREA 395
L P + + G GNV +A D+M E G +++ Y L+ ++++A
Sbjct: 643 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Query: 396 SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL 433
++EM G G P +VL G + A++L
Sbjct: 703 RSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/413 (30%), Positives = 198/413 (47%), Gaps = 31/413 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P+L + +++ L K DIDLA
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A+ ++ + Y+ ++ LC D L M+++GV+PN + Y++LI LC
Sbjct: 248 L-NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ A L+SDM E PN VTF+ LI A+ KE LV A L ++ PD+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T + ++ C R+ +A + E M K C PNV TYN LI
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFEL-------------------MISKDCFPNVVTYNTLI 407
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ +D +++F +M G+ N VTY TLI G D+ + + M +G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM--VSDG 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ I G C G VED
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
F + +G P+V+IY+ +I +C++ EA L ++M G LP + T
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 33/405 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D T+ L+ GL L N+ + L+ M RG +PN V Y +++ LCK G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L++ ME E N V +S +I + CK + +AL L + + G P+V+T +
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ R DA +L + E+ + GK+ + EM ++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P++ TY+ LI+ +C LD A +F M N VTY+TLI G C RID+G
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G Y ++++G ++ D A KQM + + P + + +
Sbjct: 420 VELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C +G +E A F+ + P + Y+ +I C+ +V + +L ++ G
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 409 PIASTFNTVLSGLCRQG---NVGTALKLVEEDMRGIGRGSLPGSG 450
P +NT++SG CR+G + + ED G LP SG
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMRED------GPLPDSG 576
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 204/449 (45%), Gaps = 76/449 (16%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ G+ N YN LI+ C+ ++ A +L+ M EP+ VT S L+ YC +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------- 212
+ +A+ L+++ G+ PD +T T ++ L + +AV +++ ++G
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 213 ------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDG 266
+ G + L +ME NV Y+ +I S C+ D AL++F +M+ G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 267 ISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDE 326
+ N +TY +LI LC+ R D ++L M + K + +N+++ +E + E
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN--VVTFNALIDAFVKEGKLVE 348
Query: 327 ALEYLKQMEKLFPRAVDRSLK---------ILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
A EKL+ + RS+ I GFC+ +++AK F+ MI + PNVV
Sbjct: 349 A-------EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 378 IYDCLIHAYCQEERVREASELMKEMTG--------------HGYL--------------- 408
Y+ LI+ +C+ +R+ E EL +EM+ HG+
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 409 ------PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
P T+NT+L GLC+ G + A+ + E R P Y+ +I+ +C+
Sbjct: 462 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME---PTIYTYNIMIEGMCKA 518
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
G + L + KG+ PD + +N+++
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 126/316 (39%), Gaps = 50/316 (15%)
Query: 192 LCSVGRVM-----DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+C GR D EIL +L G M + LP++ +N L+S+
Sbjct: 39 MCYWGRAFSSGSGDYREILRNGLHSMKLDDAIG---LFGGMVKSRPLPSIFEFNKLLSAI 95
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
+ D + + M+ GIS N TY+ LI C
Sbjct: 96 AKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFC------------------------ 131
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCF 364
R +Q AL L +M KL P V S + G+C + DA
Sbjct: 132 -------------RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
DQM+E G P+ + + LIH + EA L+ M G P T+ V++GLC++
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
G++ A L+ + ++ YS +I +LC+ A L +M KG+ P+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVV---IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 485 LTWNSLLICLSQQTTW 500
+T++SL+ CL W
Sbjct: 296 ITYSSLISCLCNYERW 311
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 206/436 (47%), Gaps = 31/436 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T++ GL + ++ V + + P L + ++++ L K + DLA
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K M ++ D Y+ ++ LC V D L M ++G++P+ Y++LI LC
Sbjct: 228 LNK-MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+SDM E PN VTF+ LI A+ KE L+ A L ++ P++V
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C R+ +A +I M K CLP+V TYN LI
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIF-------------------TLMVSKDCLPDVVTYNTLI 387
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ + +++F DM G+ N VTY TLI G D+ + + M +G
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM--VSDG 445
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
I YN++L GL + + ++A+ EYL Q K+ P ++ G C G VED
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F + +G P+V+ Y+ +I +C++ EA L +M G LP + T+NT++
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Query: 421 LCRQGNVGTALKLVEE 436
R G+ + +L++E
Sbjct: 565 HLRDGDKAASAELIKE 580
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 219/455 (48%), Gaps = 32/455 (7%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ NS+L+ + +M+ G Q D T+ L+ GL N+ + L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ M +G +P+ V Y +I+ LCK G+ A +L++ ME E + V +S +I + CK
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
++ +AL L + + G PDV T + ++ LC+ GR DA
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA------------------ 294
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIR 279
R L +M + PNV T+N LI ++ + G L A +F++M I N VTY++LI
Sbjct: 295 -SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 280 GLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--L 337
G C R+D+ +I LM SK+ ++ YN+++ G + + + +E + M + L
Sbjct: 354 GFCMHDRLDEAQQIFTLMV-SKDCLPDVVT-YNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
V + I GF + ++A+ F QM+ +G PN++ Y+ L+ C+ ++ +A
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV-EEDMRGIGRGSLPGSGHYSPLI 456
+ + + P T+N + G+C+ G V L ++G+ P Y+ +I
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK----PDVIAYNTMI 527
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
C+KG + A L ++M G LPD T+N+L+
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 216/449 (48%), Gaps = 37/449 (8%)
Query: 50 NSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAIL-MKGLCLTNRVGDGFKLLHVMK 108
N++L + + E +DL + + S V+ AI MK L G+ ++L
Sbjct: 39 NALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL---- 94
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLV 164
GV N YN +I+ LC+ ++ A +++ M + P+ VT + L+ +C +
Sbjct: 95 --GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 165 NALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFL 224
A+ L+++ G+ PD VT T ++ L + +AV ++E
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVER----------------- 195
Query: 225 KEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSG 284
M KGC P++ TY +I+ C+ G D AL++ N M+ I + V Y T+I LC
Sbjct: 196 --MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 285 GRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAV 342
+DD L + M++ +G + + Y+S++ L + +A L M K+ P V
Sbjct: 254 RHVDDALNLFTEMDN--KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 343 DRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
+ I F +G + +A++ FD+MI+ PN+V Y+ LI+ +C +R+ EA ++ M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEK 462
LP T+NT+++G C+ V ++L + R RG + + Y+ LI +
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR---RGLVGNTVTYTTLIHGFFQA 428
Query: 463 GGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+A M+ QMV G+ P+ +T+N+LL
Sbjct: 429 SDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 6/184 (3%)
Query: 14 FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKM 72
+ T+I G +A ++ + + P++ +N++LD L K ++ A + + +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYL 476
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
S ++ D YTY I+ +G+C +V DG+ L + +GVKP+ + YNT+I CK G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +L M+E P+ T++ LI A+ ++ + + L+++ S F D T V
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 189 LELL 192
++L
Sbjct: 597 TDML 600
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 205/419 (48%), Gaps = 28/419 (6%)
Query: 78 QGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA-- 135
Q D + Y L+ G C NR+ D ++L M+S+ P++V YN +I SLC GK+ A
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 136 --RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLC 193
L+SD +P +T++ILI A E + AL L+++ S G PD+ T ++ +C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 194 SVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVD 237
G V A E++ +G GK + G + + +M + C PNV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 238 TYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLM 297
TY+ILI++ C G ++ A+++ MK G++ + +YD LI C GR+D ++ L+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 298 EDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDG 355
+G I YN+VL L + + D+ALE ++ ++ P + + G
Sbjct: 395 --ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
+ A +M+ G P+ + Y+ +I C+E V EA EL+ +M + P T+N
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
VL G C+ + A+ ++E +G G P Y+ LI+ + G+++ +M L
Sbjct: 513 IVLLGFCKAHRIEDAINVLES---MVGNGCRPNETTYTVLIEGI-GFAGYRAEAMELAN 567
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 203/412 (49%), Gaps = 31/412 (7%)
Query: 92 CLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME---EPNDV 148
C + + LL M +G P+ ++ LI + +A +M +E +P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 149 TFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEES 208
++ LI +CK + +A +L++ S F PD VT ++ LCS G++ A+++L
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL--- 216
Query: 209 GEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGIS 268
++ C P V TY ILI + G +D AL + ++M G+
Sbjct: 217 ----------------NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK 260
Query: 269 WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 328
+ TY+T+IRG+C G +D ++++ +E +G + + YN +L L + + +E
Sbjct: 261 PDMFTYNTIIRGMCKEGMVDRAFEMVRNLE--LKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ + +M EK P V S+ I C DG +E+A M E+G P+ YD LI A+
Sbjct: 319 KLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF 378
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GS 445
C+E R+ A E ++ M G LP +NTVL+ LC+ G AL++ + +G G
Sbjct: 379 CREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK----LGEVGC 434
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
P S Y+ + AL G A ++++M+ GI PD +T+NS++ CL ++
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCRE 486
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 199/418 (47%), Gaps = 28/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + +I G + I+D + D + + +P +N ++ L + +DLA
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
++++ Q TY IL++ L V + KL+ M SRG+KP+ YNT+I +C
Sbjct: 216 L-NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V RA ++ ++E EP+ ++++IL+ A + L+ K FS P+VV
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
T + ++ LC G++ +A+ +L+ E+G R G++ FL+ M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
GCLP++ YN ++++ C+ G D AL++F + G S N +Y+T+ L S G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG-- 452
Query: 288 DDGLKILQL-MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDR 344
D ++ L + +E G YNS++ L RE DEA E L M + P V
Sbjct: 453 -DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
++ +LGFC +EDA + M+ G PN Y LI EA EL ++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 282 CSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL-FPR 340
C G + L +L+ M ++G + ++ G + +A+ ++ +EK P
Sbjct: 100 CRSGNYIESLHLLETM--VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPD 157
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ I GFC ++DA R D+M + P+ V Y+ +I + C ++ A +++
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
++ P T+ ++ +G V ALKL++E + RG P Y+ +I+ +C
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDE---MLSRGLKPDMFTYNTIIRGMC 274
Query: 461 EKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
++G A ++ + KG PD +++N LL L Q W
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW 314
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 252/542 (46%), Gaps = 66/542 (12%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
++S+F +IR +AR + + +A L+ T S+ N+++ LV+ ++LA Y
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 69 RKKMMASGVQGDDYTYAILMKGLCL---TNRVG--------------------------- 98
+++ SGV + YT I++ LC +VG
Sbjct: 224 -QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 99 -----DGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVT 149
+ F+L++ M +G P YNT+I+ LCK+GK RA+ + ++M P+ T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 150 FSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESG 209
+ L+ CK+ ++V + S VPD+V + ++ L G + A+
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 210 EQGRLGK-------VKGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGVLD 253
E G + ++G CR EM ++GC +V TYN ++ C+ +L
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNS 313
A +FN+M + + T LI G C G + + +++ Q M++ + + + YN+
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR--IRLDVVTYNT 520
Query: 314 VLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEG 371
+L G + D A E M +++ P + S+ + C G++ +A R +D+MI +
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 372 GVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
P V+I + +I YC+ + +++M G++P ++NT++ G R+ N+ A
Sbjct: 581 IKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 432 KLVE--EDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
LV+ E+ +G G +P Y+ ++ C + + A ++L +M+ +G+ PD T+
Sbjct: 641 GLVKKMEEEQG---GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 490 LL 491
++
Sbjct: 698 MI 699
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 187/394 (47%), Gaps = 36/394 (9%)
Query: 29 DVVKA----TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYT 83
DVV+ +D+ SR ++ P L F+S++ + + ++D A ++ + +G+ D+
Sbjct: 355 DVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYF-NSVKEAGLIPDNVI 412
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y IL++G C + L + M +G + V YNT++H LCK +G A L ++M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
E P+ T +ILI +CK NL NA+ L +K DVVT +L+ VG +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
A EI +M K LP +Y+IL+++ C G L A V+
Sbjct: 533 TAKEIW-------------------ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVW 573
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
++M I + +++I+G C G DG L+ M EG YN+++YG
Sbjct: 574 DEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM--ISEGFVPDCISYNTLIYGFV 631
Query: 320 RENQQDEALEYLKQMEK----LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
RE +A +K+ME+ L P + + GFC +++A+ +MIE G P+
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
Y C+I+ + ++ + EA + EM G+ P
Sbjct: 692 RSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 199/455 (43%), Gaps = 59/455 (12%)
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
S +D + +L++ ++ + + +++S+G + N LI SL + G V
Sbjct: 159 SNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVEL 218
Query: 135 ARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A + ++ N T +I++ A CK+ + L + G PD+VT ++
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLIS 278
Query: 191 LLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
S G + +A E+ + M KG P V TYN +I+ C+ G
Sbjct: 279 AYSSKGLMEEAFEL-------------------MNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ A +VF +M G+S + TY +L+ C G + + K+ M S++ +
Sbjct: 320 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR-SRDVVPDLVC- 377
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI 368
++S++ R D+AL Y +++ L P V ++ I G+C G + A ++M+
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 369 EEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVG 428
++G +VV Y+ ++H C+ + + EA +L EMT P + T ++ G C+ GN+
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 429 TAL----KLVEEDMR-----------GIGRGS-----------------LPGSGHYSPLI 456
A+ K+ E+ +R G G+ LP YS L+
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 557
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
ALC KG A + +M+ K I P + NS++
Sbjct: 558 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 158/373 (42%), Gaps = 25/373 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD F +++ R+ ++ + + V + P I+ ++ ++ +
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
R +M+ G D TY ++ GLC +G+ KL + M R + P+S LI CK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + A L M+E + VT++ L+ + K ++ A + S +P ++
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ ++ LCS G + +A + + EM K P V N +I
Sbjct: 553 YSILVNALCSKGHLAEAFRVWD-------------------EMISKNIKPTVMICNSMIK 593
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
YC +G M +G + ++Y+TLI G + +++ ME+ + G
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKR 362
+ YNS+L+G R+NQ EA L++M + P + I GF N+ +A R
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 363 CFDQMIEEGGVPN 375
D+M++ G P+
Sbjct: 714 IHDEMLQRGFSPD 726
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 25/281 (8%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R G++ L M R+ + ++ N L S++ G DS
Sbjct: 125 RSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV----------------- 167
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
+D LIR ++ + + L+ +G I N+++ L R + A +
Sbjct: 168 -FDLLIRTYVQARKLREAHEAFTLLRS--KGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 333 QMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++ + +L I+ C DG +E Q+ E+G P++V Y+ LI AY +
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
+ EA ELM M G G+ P T+NTV++GLC+ G A ++ E +R G P S
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS---GLSPDST 341
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y L+ C+KG + M + ++PD + ++S++
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 307 RISPYNSVLYGLYR-ENQQDEALEYLKQMEKLFPRAVDRSLKILG----FCVDGNVEDAK 361
R++P +V+ LYR N ++ Q+ FP SL + G + DA+
Sbjct: 75 RLNPL-AVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQ 133
Query: 362 RCFDQMIEEGGVP-----------------NVVIYDCLIHAYCQEERVREASELMKEMTG 404
C +MI GV N ++D LI Y Q ++REA E +
Sbjct: 134 SCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRS 193
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR-GIGRGSLPGSGHYSPLIKALCEKG 463
G+ N ++ L R G V A + +E R G+G + ++ ALC+ G
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYT----LNIMVNALCKDG 249
Query: 464 GFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+ L Q+ KG+ PD +T+N+L+ S +
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 243/502 (48%), Gaps = 54/502 (10%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLV--KEDIDL 63
DE + ++VI+ G+ M + +A D+ R F P+++ +N++L+ V K+ + +
Sbjct: 77 DEDVALSVIKTYGKNSMPD---QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
F +GV + TY +L+K C L M G KP+ Y+T+I
Sbjct: 134 ESLF--AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVI 191
Query: 124 HSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
+ L K GK+ A L +M E P+ ++ILI + KE++ A+ L ++ V
Sbjct: 192 NDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSV 251
Query: 180 -PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P+V T ++ L GRV D ++I E +K+ ER+ ++ T
Sbjct: 252 YPNVKTHNIMISGLSKCGRVDDCLKIWER----------------MKQNERE---KDLYT 292
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y+ LI C+ G +D A VFN++ S + VTY+T++ G C G+I + L++ ++ME
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR---AVDRS---LKILGFC 352
+ I YN ++ GL + DEA + +L P A D++ + I G C
Sbjct: 353 HKNSVN---IVSYNILIKGLLENGKIDEA----TMIWRLMPAKGYAADKTTYGIFIHGLC 405
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
V+G V A ++ GG +V Y +I C+++R+ EAS L+KEM+ HG +
Sbjct: 406 VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSH 465
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGR-GSLPGSGHYSPLIKALCEKGGFQSASML 471
N ++ GL R +G A +R +G+ G P Y+ LI LC+ G F AS
Sbjct: 466 VCNALIGGLIRDSRLGEASFF----LREMGKNGCRPTVVSYNILICGLCKAGKFGEASAF 521
Query: 472 LVQMVGKGILPDYLTWNSLLIC 493
+ +M+ G PD T+ S+L+C
Sbjct: 522 VKEMLENGWKPDLKTY-SILLC 542
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 221/505 (43%), Gaps = 27/505 (5%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + TVI L +A ++D ++ D +S + P + +N ++D +KE D A
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + S V + T+ I++ GL RV D K+ MK + + Y++LIH LC
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 128 KNGKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNALVL---LEKSFSFGFVP 180
G V +A S+ ++++E VT++ ++ +C+ + +L L +E S V
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVS 361
Query: 181 DVVTITKVLE-----LLCSVGRVMDAVEILEESGEQGRL-------GKVKGGCRFLKEME 228
+ I +LE + R+M A + G G V ++E+E
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
G +V Y +I C+ L+ A ++ +M G+ N + LI GL R+
Sbjct: 422 SSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLG 481
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSL 346
+ L+ M K G + + YN ++ GL + + EA ++K+M P S+
Sbjct: 482 EASFFLREM--GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHG 406
+ G C D ++ A + Q ++ G +V++++ LIH C ++ +A +M M
Sbjct: 540 LLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRN 599
Query: 407 YLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQ 466
T+NT++ G + G+ A ++ M +G P Y+ ++K LC G
Sbjct: 600 CTANLVTYNTLMEGFFKVGDSNRA-TVIWGYMYKMGLQ--PDIISYNTIMKGLCMCRGVS 656
Query: 467 SASMLLVQMVGKGILPDYLTWNSLL 491
A GI P TWN L+
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILV 681
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 155/351 (44%), Gaps = 30/351 (8%)
Query: 57 VKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNS 116
+KE ++L R K + + +Y IL+KGL ++ + + +M ++G +
Sbjct: 341 IKESLELWRIMEHKNSV------NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 117 VIYNTLIHSLCKNGKVGRARSLMSDMEEPN---DV-TFSILICAYCKEENLVNALVLLEK 172
Y IH LC NG V +A +M ++E DV ++ +I CK++ L A L+++
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 173 SFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGK 216
G + ++ L R+ +A L E G+ G + GK
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 217 VKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDT 276
F+KEM G P++ TY+IL+ C +D AL++++ G+ + + ++
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 277 LIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK 336
LI GLCS G++DD + ++ ME + YN+++ G ++ + A M K
Sbjct: 575 LIHGLCSVGKLDDAMTVMANME--HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYK 632
Query: 337 --LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
L P + + + G C+ V A FD G P V ++ L+ A
Sbjct: 633 MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 111/275 (40%), Gaps = 58/275 (21%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + ++I L + + + + +S+ + + + N+++ L+++ +F+
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKP--------------- 114
++M +G + +Y IL+ GLC + G+ + M G KP
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 115 --------------------NSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTF 150
+ +++N LIH LC GK+ A ++M++ME N VT+
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ + K + A V+ + G PD+++ +++ LC V A+E
Sbjct: 608 NTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME------- 660
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
F + G P V T+NIL+ +
Sbjct: 661 ------------FFDDARNHGIFPTVYTWNILVRA 683
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/498 (26%), Positives = 220/498 (44%), Gaps = 66/498 (13%)
Query: 3 HSIQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED 60
H ++S P SI F ++ + + + + V+ D + ++ L N +++ +
Sbjct: 62 HMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSS 121
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
+ + KMM G + D T+ L+ G CL NR+ + +++ M G+KP+ V+Y
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYT 181
Query: 121 TLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T+I SLCKNG V A SL ME P+ V ++ L+ C +A LL
Sbjct: 182 TIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
PDV+T +++ G+ +DA E+ EM R PN+
Sbjct: 242 KIKPDVITFNALIDAFVKEGKFLDAEELYN-------------------EMIRMSIAPNI 282
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI+ +C G +D A +F M+ G + V Y +LI G C ++DD +KI
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY- 341
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGN 356
E S++G G Y ++ I GF G
Sbjct: 342 -EMSQKGLTGNTITYTTL---------------------------------IQGFGQVGK 367
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH---GYLPIAST 413
A+ F M+ G PN+ Y+ L+H C +V++A + ++M G P T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+N +L GLC G + AL +V EDMR R G Y+ +I+ +C+ G ++A L
Sbjct: 428 YNVLLHGLCYNGKLEKAL-MVFEDMR--KREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 474 QMVGKGILPDYLTWNSLL 491
+ KG+ P+ +T+ +++
Sbjct: 485 SLPSKGVKPNVVTYTTMI 502
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 172/395 (43%), Gaps = 64/395 (16%)
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKE 160
H+++SR + P+ + + L++ + K K +L ++ + T ++L+ +C+
Sbjct: 62 HMVESRPL-PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQS 120
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
A L K GF PD+VT T ++ C R+ +A+ ++
Sbjct: 121 SQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN-------------- 166
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
+M G P+V Y +I S C+ G ++ AL +F+ M+ GI + V Y +L+ G
Sbjct: 167 -----QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPR 340
LC+ GR D +S+L G+ + K+ P
Sbjct: 222 LCNSGRWRDA---------------------DSLLRGMTKR--------------KIKPD 246
Query: 341 AVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMK 400
+ + I F +G DA+ +++MI PN+ Y LI+ +C E V EA ++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 401 EMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG-HYSPLIKAL 459
M G P + ++++G C+ V A+K+ E + + L G+ Y+ LI+
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE----MSQKGLTGNTITYTTLIQGF 362
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 494
+ G A + MV +G+ P+ T+N LL CL
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 64/321 (19%)
Query: 9 PDESIFITVIRGL---GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLAR 65
PD ++ +++ GL GR R + +++ +++ + P + FN+++D VKE L
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRG---MTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
+M+ + + +TY L+ G C+ V + ++ ++M+++G P+ V Y +LI+
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 126 LCKNGKVGRARSLMSDMEE---------------------------------------PN 146
CK KV A + +M + PN
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 147 DVTFSILICAYCKEENLVNALVLLE---KSFSFGFVPDVVTITKVLELLCSVGRVMDAVE 203
T+++L+ C + AL++ E K G P++ T +L LC G++ A+
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALM 446
Query: 204 ILEESGE--------------QG--RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYC 247
+ E+ + QG + GKVK + KG PNV TY +IS
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLF 506
Query: 248 ETGVLDSALDVFNDMKIDGIS 268
G+ A +F MK DG+S
Sbjct: 507 REGLKHEAHVLFRKMKEDGVS 527
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 351 FCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPI 410
FC A +M++ G P++V + LI+ +C R+ EA ++ +M G P
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 411 ASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASM 470
+ T++ LC+ G+V AL L ++ M G P Y+ L+ LC G ++ A
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQ-MENYG--IRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 471 LLVQMVGKGILPDYLTWNSLLICLSQQTTWL-LLLLLNEMV 510
LL M + I PD +T+N+L+ ++ +L L NEM+
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 211/441 (47%), Gaps = 30/441 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + F T+I+GL +++ V D + P + +NSI++ + + D LA
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
RK M V+ D +TY+ ++ LC + L M+++G+K + V YN+L+ LC
Sbjct: 216 LRK-MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GK L+ DM PN +TF++L+ + KE L A L ++ + G P+++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ C R+ +A +L+ M R C P++ T+ LI
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDL-------------------MVRNKCSPDIVTFTSLI 375
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
YC +D + VF ++ G+ N VTY L++G C G+I ++ Q M G
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM--VSHG 433
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLK--QMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ Y +L GL + ++ALE + Q K+ V + I G C G VEDA
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F + +G PNV+ Y +I C++ + EA+ L+++M G P T+NT++
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 422 CRQGNVGTALKLVEEDMRGIG 442
R G++ + KL+EE M+ G
Sbjct: 554 LRDGDLTASAKLIEE-MKSCG 573
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 233/499 (46%), Gaps = 43/499 (8%)
Query: 15 ITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMA 74
I + + + R+R + +V D F+ K FN +LD + K++
Sbjct: 73 IALFQEMIRSRPLPSLV---DFSRFFSAIARTKQFNLVLD-------------FCKQLEL 116
Query: 75 SGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGR 134
+G+ + YT I++ C + + +L + G +P++ +NTLI L GKV
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSE 176
Query: 135 ARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLE 190
A L+ M E P+ VT++ ++ C+ + AL LL K DV T + +++
Sbjct: 177 AVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIID 236
Query: 191 LLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLP 234
LC G + A+ + +E +G + GK G LK+M + +P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 235 NVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKIL 294
NV T+N+L+ + + G L A +++ +M GIS N +TY+TL+ G C R+ + +L
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 295 QLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFC 352
LM +K I + S++ G + D+ ++ + + K L AV S+ + GFC
Sbjct: 357 DLMVRNK--CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
G ++ A+ F +M+ G +P+V+ Y L+ C ++ +A E+ +++
Sbjct: 415 QSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV 474
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
+ T++ G+C+ G V A L +G P Y+ +I LC+KG A++LL
Sbjct: 475 MYTTIIEGMCKGGKVEDAWNLF---CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 473 VQMVGKGILPDYLTWNSLL 491
+M G P+ T+N+L+
Sbjct: 532 RKMEEDGNAPNDCTYNTLI 550
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 147/326 (45%), Gaps = 59/326 (18%)
Query: 16 TVIRGLGRARMIND-VVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMM 73
+++RGL +A ND + D+VSR + P++ FN +LDV VKE + A Y K+M+
Sbjct: 268 SLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKEGKLQEANELY-KEMI 325
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
G+ + TY LM G C+ NR+ + +L +M P+ V + +LI C +V
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 134 RARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 189
+ ++ + N VT+SIL+ +C+ + A L ++ S G +PDV+T +L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 190 ELLCSVGRVMDAVEILEE-SGEQGRLGKV----------KGG------------------ 220
+ LC G++ A+EI E+ + LG V KGG
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 221 -------------CR---------FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDV 258
C+ L++ME G PN TYN LI ++ G L ++ +
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 259 FNDMKIDGISWNFVTYDTLIRGLCSG 284
+MK G S + + +I L SG
Sbjct: 566 IEEMKSCGFSADASSIKMVIDMLLSG 591
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 16/231 (6%)
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLK 347
DD + + Q M S+ + ++ + R Q + L++ KQ+E + ++
Sbjct: 70 DDAIALFQEMIRSRPLPS--LVDFSRFFSAIARTKQFNLVLDFCKQLE---LNGIAHNIY 124
Query: 348 ILGFCVDGNVEDAKRCFD-----QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEM 402
L ++ K CF ++++ G P+ ++ LI E +V EA L+ M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 403 TGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCE 461
+G P T+N++++G+CR G+ AL L+ + + R + YS +I +LC
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFT----YSTIIDSLCR 240
Query: 462 KGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLL-LLLLNEMVS 511
G +A L +M KGI +T+NSL+ L + W LLL +MVS
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVS 291
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 230/503 (45%), Gaps = 38/503 (7%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSR----FNMTPSLKIFNSILDVLVKEDI-DLAR 65
E FI V R G+A + + KA DL R F S+K FNS+L+V++ E +
Sbjct: 112 ERSFIVVFRAYGKAHLPD---KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGL 168
Query: 66 AFYR---KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
FY M + + ++ +++K LC V ++ M R P+ Y TL
Sbjct: 169 EFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTL 228
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
+ LCK ++ A L+ +M+ P+ V +++LI CK+ +L L++ F G
Sbjct: 229 MDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGC 288
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+ VT ++ LC G++ AV +LE M C+PN T
Sbjct: 289 VPNEVTYNTLIHGLCLKGKLDKAVSLLER-------------------MVSSKCIPNDVT 329
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
Y LI+ + A+ + + M+ G N Y LI GL G+ ++ + + + M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM- 388
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGN 356
+++G K I Y+ ++ GL RE + +EA E L +M P A S + GF G
Sbjct: 389 -AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 357 VEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNT 416
E+A + + +M + G N Y LI C RV+EA + +M G P +++
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 417 VLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 476
++ GLC G++ ALKL E + S P Y+ L+ LC + A LL M+
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 477 GKGILPDYLTWNSLLICLSQQTT 499
+G PD +T N+ L LS+++
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSN 590
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 197/454 (43%), Gaps = 53/454 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
PD + T++ GL + I++ V D + +PS I+N ++D L K+ DL R
Sbjct: 220 PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKG-DLTRVTK 278
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
M G ++ TY L+ GLCL ++ LL M S PN V Y TLI+ L
Sbjct: 279 LVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K + A L+S MEE N +S+LI KE A+ L K G P++V
Sbjct: 339 KQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIV 398
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +++ LC G+ +A EIL M GCLPN TY+ L+
Sbjct: 399 VYSVLVDGLCREGKPNEAKEILN-------------------RMIASGCLPNAYTYSSLM 439
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +TG+ + A+ V+ +M G S N Y LI GLC GR+ + + + M G
Sbjct: 440 KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI--G 497
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM-----EKLFPRAVDRSLKILGFCVDGNVE 358
K Y+S++ GL D AL+ +M K P V ++ + G C+ ++
Sbjct: 498 IKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDIS 557
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE---------------------ERVREASE 397
A + M++ G P+V+ + ++ ++ +RV A
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACT 617
Query: 398 LMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTAL 431
+++ M G P ST+ ++ +C+ + A+
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 119/262 (45%), Gaps = 17/262 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ ++ GL R N+ + + + P+ ++S++ K +
Sbjct: 395 PNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQV 454
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K+M +G + + Y++L+ GLC RV + + M + G+KP++V Y+++I LC
Sbjct: 455 WKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCG 514
Query: 129 NGKVGRARSLMSDM-------EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
G + A L +M +P+ VT++IL+ C ++++ A+ LL G PD
Sbjct: 515 IGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPD 574
Query: 182 VVTITKVLELL------CSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPN 235
V+T L L C GR ++ Q +V G C ++ M K P
Sbjct: 575 VITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQ----RVSGACTIVEVMLGKYLAPK 630
Query: 236 VDTYNILISSYCETGVLDSALD 257
T+ +++ C+ +++A+D
Sbjct: 631 TSTWAMIVREICKPKKINAAID 652
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 214/442 (48%), Gaps = 35/442 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T+I GL ++ V D + + P L + ++++ L K DIDLA
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM A+ ++ + + ++ LC V L M+++G++PN V YN+LI+ LC
Sbjct: 246 L-NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
G+ A L+S+M E PN VTF+ LI A+ KE LV A L E+ PD +
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C R+ +A ++ K M K CLPN+ TYN LI
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMF-------------------KFMVSKDCLPNIQTYNTLI 405
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ +C+ ++ +++F +M G+ N VTY T+I+G G D + + M ++
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 304 SKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
+ I Y+ +L+GL + D AL +YL++ E + ++ I G C G V +A
Sbjct: 466 TD--IMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM-IEGMCKAGKVGEA 522
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+D P+VV Y+ +I C + ++EA +L ++M G LP + T+NT++
Sbjct: 523 ---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Query: 421 LCRQGNVGTALKLVEEDMRGIG 442
R + + +L++E MR G
Sbjct: 580 NLRDCDRAASAELIKE-MRSSG 600
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 215/441 (48%), Gaps = 36/441 (8%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
+M+ G + D +T+ L+ GL L N+ + L+ M RG +P+ V Y T+++ LCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+ A +L++ ME + N V F+ +I + CK ++ A+ L + + G P+VVT
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 187 KVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEMERK 230
++ LC+ GR DA +L E+ + GK+ + +EM ++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 231 GCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 290
P+ TYN+LI+ +C LD A +F M N TY+TLI G C R++DG
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 291 LKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKI 348
+++ + M S+ G G Y +++ G ++ D A KQM ++ + S+ +
Sbjct: 418 VELFREM--SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL 408
G C G ++ A F + + N+ IY+ +I C+ +V EA +L ++
Sbjct: 476 HGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK--- 532
Query: 409 PIASTFNTVLSGLCRQGNVGTA---LKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
P T+NT++SGLC + + A + ++ED G+LP SG Y+ LI+A
Sbjct: 533 PDVVTYNTMISGLCSKRLLQEADDLFRKMKED------GTLPNSGTYNTLIRANLRDCDR 586
Query: 466 QSASMLLVQMVGKGILPDYLT 486
+++ L+ +M G + D T
Sbjct: 587 AASAELIKEMRSSGFVGDAST 607
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 233/485 (48%), Gaps = 37/485 (7%)
Query: 19 RGLGRARMINDVVKATDLVSRF-NMT-----PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
R + R R+ +D++K D V F +M PS+ FN +L + K + ++M
Sbjct: 51 REILRNRL-SDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
G+ D YTY+I + C +++ +L M G +P+ V ++L++ C + ++
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A +L+ M E P+ TF+ LI A+ L+++ G PD+VT V
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+ LC G + A+ +L + ME NV +N +I S C+
Sbjct: 230 VNGLCKRGDIDLALNLLNK-------------------MEAARIKANVVIFNTIIDSLCK 270
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
++ A+D+F +M+ GI N VTY++LI LC+ GR D ++L M + K +
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN--V 328
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
+N+++ ++E + EA + ++M + P + +L I GFC+ +++AK+ F
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGN 426
M+ + +PN+ Y+ LI+ +C+ +RV + EL +EM+ G + T+ T++ G + G+
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+A ++V + M + YS L+ LC G +A ++ + + +
Sbjct: 449 CDSA-QMVFKQM--VSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 487 WNSLL 491
+N+++
Sbjct: 506 YNTMI 510
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 7/275 (2%)
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
ER + D IL + + +D A+D+F DM + V ++ L+ + +
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKL--FPRAVDRS 345
+ + + + M+ G + Y+ + R +Q AL L +M KL P V S
Sbjct: 100 ELVISLGEQMQ--TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLS 157
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
+ G+C + DA DQM+E G P+ + LIH + EA L+ +M
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P T+ TV++GLC++G++ AL L+ + + ++ ++ +I +LC+
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV---IFNTIIDSLCKYRHV 274
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ A L +M KGI P+ +T+NSL+ CL W
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 216/471 (45%), Gaps = 68/471 (14%)
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM---KSRGVKPNSVIYNTLIHSL 126
++M G + ++Y IL+KGLC NR + +LLH+M + G P+ V Y T+I+
Sbjct: 147 RRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGF 206
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A S +M + P+ VT++ +I A CK + + A+ +L G +PD
Sbjct: 207 FKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDC 266
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
+T +L CS G+ +A+ FLK+M G P+V TY++L
Sbjct: 267 MTYNSILHGYCSSGQPKEAIG-------------------FLKKMRSDGVEPDVVTYSLL 307
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
+ C+ G A +F+ M G+ TY TL++G + G + + +L LM +
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM--VRN 365
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDA 360
G ++ ++ ++ + D+A+ +M + L P AV I C G VEDA
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 425
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIH-----------------------------------A 385
F+QMI+EG P ++Y+ LIH +
Sbjct: 426 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 485
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGS 445
+C+E RV E+ +L + M G P T+NT+++G C G + A+KL+ + G
Sbjct: 486 HCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG---MVSVGL 542
Query: 446 LPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
P + YS LI C+ + A +L +M G+ PD +T+N +L L Q
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 223/541 (41%), Gaps = 103/541 (19%)
Query: 7 SPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLAR 65
SPPD + TVI G + + + + P + +NSI+ L K + +D A
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
M+ +GV D TY ++ G C + + + L M+S GV+P+ V Y+ L+
Sbjct: 252 EVL-NTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDY 310
Query: 126 LCKNGKVGRARSLMSDMEE---------------------------------------PN 146
LCKNG+ AR + M + P+
Sbjct: 311 LCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPD 370
Query: 147 DVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE 206
FSILICAY K+ + A+++ K G P+ VT V+ +LC GRV DA+ E
Sbjct: 371 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 430
Query: 207 ESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
+ ++G K + + EM +G N +N +I S+C+ G
Sbjct: 431 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 490
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP 310
+ + +F M G+ N +TY+TLI G C G++D+ +K+L M G K
Sbjct: 491 RVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM--VSVGLKPNTVT 548
Query: 311 YNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE 370
Y++++ G + ++ ++AL K+ME
Sbjct: 549 YSTLINGYCKISRMEDALVLFKEME---------------------------------SS 575
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTA 430
G P+++ Y+ ++ Q R A EL +T G ST+N +L GLC+ A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635
Query: 431 LKLVEE----DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
L++ + D++ R ++ +I AL + G A L V G++P+Y T
Sbjct: 636 LQMFQNLCLMDLKLEAR-------TFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 487 W 487
+
Sbjct: 689 Y 689
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 212/527 (40%), Gaps = 105/527 (19%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + ++I L +A+ ++ ++ + + + + P +NSIL +
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KKM + GV+ D TY++LM LC R + K+ M RG+KP Y TL+
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G + L+ M P+ FSILICAY K+ + A+++ K G P+ VT
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQG-------------------------------- 212
V+ +LC GRV DA+ E+ ++G
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 213 -------------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLD 253
+ G+V + + M R G PNV TYN LI+ YC G +D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 254 SALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDS------------- 300
A+ + + M G+ N VTY TLI G C R++D L + + ME S
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 301 --------------------KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM------ 334
+ G++ +S YN +L+GL + D+AL+ + +
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 335 --EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERV 392
+ F +D LK+ G ++AK F G VPN Y + + +
Sbjct: 649 LEARTFNIMIDALLKV------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 702
Query: 393 REASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV---GTALKLVEE 436
E +L M +G + N ++ L ++G + GT L +++E
Sbjct: 703 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 186/396 (46%), Gaps = 28/396 (7%)
Query: 112 VKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNAL 167
V P+ Y LI C+ G++ + + ++ + + + F+ L+ C ++ +A+
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 168 -VLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKE 226
++L + G +P+V + +L+ LC R +A+E+L + +GG
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD------RGG------ 190
Query: 227 MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGR 286
G P+V +Y +I+ + + G D A +++M GI + VTY+++I LC
Sbjct: 191 ----GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQA 246
Query: 287 IDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDR 344
+D +++L M K G YNS+L+G Q EA+ +LK+M + + P V
Sbjct: 247 MDKAMEVLNTM--VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 345 SLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTG 404
SL + C +G +A++ FD M + G P + Y L+ Y + + E L+ M
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 405 HGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGG 464
+G P F+ ++ +QG V A+ LV MR +G P + Y +I LC+ G
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAM-LVFSKMRQ--QGLNPNAVTYGAVIGILCKSGR 421
Query: 465 FQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 500
+ A + QM+ +G+ P + +NSL+ L W
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 201/496 (40%), Gaps = 100/496 (20%)
Query: 74 ASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVG 133
A V D TY IL+ C R+ GF L + +G + +++ + L+ LC + +
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTS 139
Query: 134 RARSL-MSDMEE----PNDVTFSILICAYCKEENLVNALVLLE---KSFSFGFVPDVVTI 185
A + + M E PN +++IL+ C E AL LL G PDVV+
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
T V+ G A E M +G LP+V TYN +I++
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHE-------------------MLDRGILPDVVTYNSIIAA 240
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED------ 299
C+ +D A++V N M +G+ + +TY++++ G CS G+ + + L+ M
Sbjct: 241 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPD 300
Query: 300 ---------------------------SKEGSKGRISPYNSVLYG--------------- 317
+K G K I+ Y ++L G
Sbjct: 301 VVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 360
Query: 318 --------------------LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDG 355
++ + D+A+ +M + L P AV I C G
Sbjct: 361 LMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSG 420
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
VEDA F+QMI+EG P ++Y+ LIH C + A EL+ EM G FN
Sbjct: 421 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
+++ C++G V + KL E +R G P Y+ LI C G A LL M
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVR---IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGM 537
Query: 476 VGKGILPDYLTWNSLL 491
V G+ P+ +T+++L+
Sbjct: 538 VSVGLKPNTVTYSTLI 553
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 349 LGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL-MKEMTGHGY 407
LGF GNV I++G + + + L+ C ++R +A ++ ++ MT G
Sbjct: 105 LGFAALGNV----------IKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGC 154
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
+P ++N +L GLC + AL+L+ G GS P Y+ +I ++G
Sbjct: 155 IPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDK 214
Query: 468 ASMLLVQMVGKGILPDYLTWNSLLICLSQ-QTTWLLLLLLNEMV 510
A +M+ +GILPD +T+NS++ L + Q + +LN MV
Sbjct: 215 AYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Query: 4 SIQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDL 63
S+ P+ + T+I G + + D + + ++P + +N IL L +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A ++ SG Q + TY I++ GLC D ++ + +K + +N +I
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 124 HSLCKNGKVGRARSLM----SDMEEPNDVTFSIL 153
+L K G+ A+ L S+ PN T+ ++
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 218/454 (48%), Gaps = 37/454 (8%)
Query: 44 PSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
PS+ NS+L+ + +M+ G Q D T+ L+ GL N+ + L
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCK 159
+ M +G +P+ V Y +I+ LCK G+ A +L++ ME E + V ++ +I CK
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKG 219
+++ +A L K + G PDV T ++ LC+ GR DA
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA------------------ 304
Query: 220 GCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM-KIDGISWNFVTYDTLI 278
R L +M K P++ +N LI ++ + G L A ++++M K + V Y+TLI
Sbjct: 305 -SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EK 336
+G C R+++G+++ + M S+ G G Y ++++G ++ D A KQM +
Sbjct: 364 KGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
+ P + ++ + G C +GNVE A F+ M + ++V Y +I A C+ +V +
Sbjct: 422 VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGW 481
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL---VEEDMRGIGRGSLPGSGHYS 453
+L ++ G P T+ T++SG CR+G A L ++ED G LP SG Y+
Sbjct: 482 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED------GPLPNSGTYN 535
Query: 454 PLIKALCEKGGFQSASMLLVQMVGKGILPDYLTW 487
LI+A G +++ L+ +M G D T+
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 211/460 (45%), Gaps = 41/460 (8%)
Query: 44 PSLKIFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFK 102
PS+ F+ +L + K + DL + ++M G+ + YTY+I + C +++
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISL-GEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA 131
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYC 158
+L M G P+ V N+L++ C ++ A +L+ M E P+ VTF+ L+
Sbjct: 132 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 191
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVK 218
+ A+ L+E+ G PD+VT V+ LC G A+ +L +
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK----------- 240
Query: 219 GGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLI 278
ME+ +V YN +I C+ +D A D+FN M+ GI + TY+ LI
Sbjct: 241 --------MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 279 RGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM 334
LC+ GR D ++L M + I+P +N+++ +E + EA + +M
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKN------INPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Query: 335 EK---LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
K FP V + I GFC VE+ F +M + G V N V Y LIH + Q
Sbjct: 347 VKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
A + K+M G P T+N +L GLC GNV TAL + E + R
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK---RDMKLDIVT 463
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +I+ALC+ G + L + KG+ P+ +T+ +++
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 201/421 (47%), Gaps = 30/421 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD F T++ GL + ++ V + + P L + ++++ L K + DLA
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
KM ++ D Y ++ GLC + D F L + M+++G+KP+ YN LI LC
Sbjct: 238 L-NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSF-SFGFVPDV 182
G+ A L+SDM E P+ V F+ LI A+ KE LV A L ++ S PDV
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
V +++ C RV + +E+ +EM ++G + N TY L
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVF-------------------REMSQRGLVGNTVTYTTL 397
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I + + D+A VF M DG+ + +TY+ L+ GLC+ G ++ L + + M+ K
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ--KR 455
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKILGFCVDGNVEDA 360
K I Y +++ L + + ++ + ++ + P V + + GFC G E+A
Sbjct: 456 DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 515
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
F +M E+G +PN Y+ LI A ++ ++EL+KEM G+ ASTF V +
Sbjct: 516 DALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Query: 421 L 421
L
Sbjct: 576 L 576
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 190/433 (43%), Gaps = 27/433 (6%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMAS 75
+++ G I++ V D + P F +++ L + + ++M+
Sbjct: 150 SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK 209
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G Q D TY ++ GLC LL+ M+ ++ + VIYNT+I LCK + A
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 136 RSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
L + ME +P+ T++ LI C +A LL PD+V +++
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
G++++A ++ +E ++ K C P+V YN LI +C+
Sbjct: 330 FVKEGKLVEAEKLYDEM------------------VKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
++ ++VF +M G+ N VTY TLI G D+ + + M +G I Y
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM--VSDGVHPDIMTY 429
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N +L GL + AL + M+K + V + I C G VED F +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
+G PNVV Y ++ +C++ EA L EM G LP + T+NT++ R G+
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 430 ALKLVEEDMRGIG 442
+ +L++E MR G
Sbjct: 550 SAELIKE-MRSCG 561
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 34 TDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLC 92
+D++ + N+ P L FN+++D VKE + A Y + + + D Y L+KG C
Sbjct: 309 SDMLEK-NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 93 LTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL-----CKNGKVGRARSLMSDMEEPND 147
RV +G ++ M RG+ N+V Y TLIH C N ++ + ++SD P+
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM-VFKQMVSDGVHPDI 426
Query: 148 VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEE 207
+T++IL+ C N+ ALV+ E D+VT T ++E LC G+V D ++
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 208 SGEQGRLGKV-------KGGCR---------FLKEMERKGCLPNVDTYNILISSYCETGV 251
+G V G CR EM+ G LPN TYN LI + G
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
++ ++ +M+ G + + T+ L+ + GR+D
Sbjct: 547 EAASAELIKEMRSCGFAGDASTFG-LVTNMLHDGRLD 582
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
LD A+ +F DM + V + L+ + + D + + + M++ G + Y
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL--GISHNLYTY 113
Query: 312 NSVLYGLYRENQQDEALEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
+ + R +Q AL L +M KL P V + + GFC + +A DQM+E
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G P+ V + L+H Q + EA L++ M G P T+ V++GLC++G
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
AL L+ + +G + Y+ +I LC+ A L +M KGI PD T+N
Sbjct: 234 ALNLLNKMEKGKIEADVV---IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNP 290
Query: 490 LLICLSQQTTW 500
L+ CL W
Sbjct: 291 LISCLCNYGRW 301
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Query: 354 DGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAST 413
D ++DA F M++ P++V + L+ A + + L ++M G T
Sbjct: 53 DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 112
Query: 414 FNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
++ ++ CR+ + AL ++ + M+ +G G P + L+ C A L+
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMK-LGYG--PSIVTLNSLLNGFCHGNRISEAVALVD 169
Query: 474 QMVGKGILPDYLTWNSLLICLSQQT 498
QMV G PD +T+ +L+ L Q
Sbjct: 170 QMVEMGYQPDTVTFTTLVHGLFQHN 194
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 231/504 (45%), Gaps = 29/504 (5%)
Query: 11 ESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYR 69
E +++ ++ GR + + V + + ++ P++ +N+I+ VLV D A Y
Sbjct: 76 EGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
+ M G+ D Y++ I MK C T+R +LL+ M S+G + N V Y T++ +
Sbjct: 136 R-MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 130 GKVGRARSLMSDMEEPND----VTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
L M TF+ L+ CK+ ++ LL+K G +P++ T
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKV-------KGGCR---------FLKEMER 229
++ LC G + AV ++ EQG V G C+ +L +M
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
+G P+ TYN LI+ YC+ G++ A + D +G + TY +LI GLC G +
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 290 GLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLK 347
L + E +G K + YN+++ GL + EA + +M + L P ++
Sbjct: 375 ALALFN--EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432
Query: 348 ILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY 407
+ G C G V DA MI +G P++ ++ LIH Y + ++ A E++ M +G
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 408 LPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQS 467
P T+N++L+GLC+ + E + +G P ++ L+++LC
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVM---ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDE 549
Query: 468 ASMLLVQMVGKGILPDYLTWNSLL 491
A LL +M K + PD +T+ +L+
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLI 573
Score = 162 bits (409), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 206/449 (45%), Gaps = 31/449 (6%)
Query: 46 LKIFNSILDVLVKE-DIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLL 104
L FN +L VL K+ D+ K++ GV + +TY + ++GLC + +++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLL-DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKE 160
+ +G KP+ + YN LI+ LCKN K A + M EP+ T++ LI YCK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGG 220
+ A ++ + GFVPD T +++ LC G A+ + E+ LGK
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA-----LGK---- 385
Query: 221 CRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
G PNV YN LI G++ A + N+M G+ T++ L+ G
Sbjct: 386 ----------GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLF 338
LC G + D ++++M +G I +N +++G + + + ALE L M +
Sbjct: 436 LCKMGCVSDADGLVKVM--ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 339 PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASEL 398
P + + G C ED + M+E+G PN+ ++ L+ + C+ ++ EA L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 399 MKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKA 458
++EM P A TF T++ G C+ G++ A L + S + Y+ +I A
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS--STPTYNIIIHA 611
Query: 459 LCEKGGFQSASMLLVQMVGKGILPDYLTW 487
EK A L +MV + + PD T+
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 224/482 (46%), Gaps = 31/482 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + I+GL + ++ V+ + P + +N+++ L K Y
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
KM+ G++ D YTY L+ G C V +++ G P+ Y +LI LC
Sbjct: 309 LGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCH 368
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
G+ RA +L ++ +PN + ++ LI + ++ A L + G +P+V T
Sbjct: 369 EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQT 428
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC +G V DA + +K M KG P++ T+NILI
Sbjct: 429 FNILVNGLCKMGCVSDADGL-------------------VKVMISKGYFPDIFTFNILIH 469
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
Y +++AL++ + M +G+ + TY++L+ GLC + +D ++ + M ++G
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM--VEKGC 527
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
+ +N +L L R + DEAL L++M+ + P AV I GFC +G+++ A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 363 CFDQMIEEGGVPNVV-IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
F +M E V + Y+ +IHA+ ++ V A +L +EM P T+ ++ G
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 422 CRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 481
C+ GNV K + E M G +P +I LC + A+ ++ +MV KG++
Sbjct: 648 CKTGNVNLGYKFLLEMME---NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 482 PD 483
P+
Sbjct: 705 PE 706
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 188/417 (45%), Gaps = 42/417 (10%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
PD + T+I G + M+ + P + S++D L E + + A A
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ + + G++ + Y L+KGL + + +L + M +G+ P +N L++ LC
Sbjct: 379 FNEAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G V A L+ M P+ TF+ILI Y + + NAL +L+ G PDV
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVY 497
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +L LC + D +E K M KGC PN+ T+NIL+
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETY-------------------KTMVEKGCAPNLFTFNILL 538
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
S C LD AL + +MK ++ + VT+ TLI G C G +D + + ME++ +
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDR---------SLKILGFCVD 354
S + YN +++ E L + EKLF VDR L + GFC
Sbjct: 599 SSSTPT-YNIIIHAF------TEKLN-VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKT 650
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA 411
GNV + +M+E G +P++ +I+ C E+RV EA+ ++ M G +P A
Sbjct: 651 GNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 164/363 (45%), Gaps = 51/363 (14%)
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
GR GKV+ + M+ C P V +YN ++S ++G D A V+ M+ GI+ +
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
++ ++ C R L++L M S +G + + Y +V+ G Y EN + E E
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNM--SSQGCEMNVVAYCTVVGGFYEENFKAEGYELF 204
Query: 332 KQM----------------------------EKLFPRAVDR---------SLKILGFCVD 354
+M EKL + + R +L I G C
Sbjct: 205 GKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQR 264
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G ++ A R +IE+G P+V+ Y+ LI+ C+ + +EA + +M G P + T+
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
NT+++G C+ G V A ++V + + G +P Y LI LC +G A L +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGD---AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 475 MVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHL 534
+GKGI P+ + +N+L+ LS Q L + +E+S K ++++ N L
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMIL---------EAAQLANEMSEKGLIPEVQTFNIL 432
Query: 535 AHG 537
+G
Sbjct: 433 VNG 435
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 180/420 (42%), Gaps = 30/420 (7%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y MK +V + + M +P YN ++ L +G +A + M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 144 E----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ P+ +F+I + ++CK AL LL S G +VV V VG
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTV------VGG-- 190
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
EE+ + G +M G + T+N L+ C+ G + +
Sbjct: 191 ----FYEENFKAE-------GYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ + G+ N TY+ I+GLC G +D ++++ + ++G K + YN+++YGL
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL--IEQGPKPDVITYNNLIYGLC 297
Query: 320 RENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
+ ++ EA YL +M E L P + + I G+C G V+ A+R + G VP+
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQF 357
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
Y LI C E A L E G G P +NT++ GL QG + A +L E
Sbjct: 358 TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Query: 438 MRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
+G +P ++ L+ LC+ G A L+ M+ KG PD T+N L+ S Q
Sbjct: 418 SE---KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 28/342 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ ++ T+I+GL MI + + + +S + P ++ FN +++ L K
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
K M++ G D +T+ IL+ G ++ + ++L VM GV P+ YN+L++ LCK
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K M E PN TF+IL+ + C+ L AL LLE+ + PD VT
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+++ C G + A + + E ++ + TYNI+I
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS------------------STPTYNIIIH 610
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLK-ILQLMEDSKEG 303
++ E + A +F +M + + TY ++ G C G ++ G K +L++ME+ G
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN---G 667
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVD 343
++ V+ L E++ EA + +M + L P AV+
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 198/437 (45%), Gaps = 32/437 (7%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
+ S P SI F ++ + + + V+ + + + P L N ++ +
Sbjct: 75 VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQP 134
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ + KMM G + D T+ L+ G C NR+ D L + G KPN V Y TL
Sbjct: 135 CRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTL 194
Query: 123 IHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I LCKN + A L + M PN VT++ L+ C+ +A LL
Sbjct: 195 IRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI 254
Query: 179 VPDVVTITKVLELLCSVGRVMDAVE---------ILEESGEQGRLGKVKGGCRF--LKE- 226
P+V+T T +++ VG++M+A E + + G L + G C + L E
Sbjct: 255 EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL--INGLCMYGLLDEA 312
Query: 227 ------MERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRG 280
MER GC PN Y LI +C++ ++ + +F +M G+ N +TY LI+G
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG 372
Query: 281 LCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL---EYLKQMEKL 337
C GR D ++ M S + I YN +L GL + ++AL EY+++ E +
Sbjct: 373 YCLVGRPDVAQEVFNQM--SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE-M 429
Query: 338 FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASE 397
V ++ I G C G VEDA F + +G PNV+ Y +I +C+ + EA
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 398 LMKEMTGHGYLPIASTF 414
L K+M G+LP S +
Sbjct: 490 LFKKMKEDGFLPNESVY 506
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 180/403 (44%), Gaps = 30/403 (7%)
Query: 95 NRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTF 150
NR L M+ G+ P N ++H +C + + RA + M EP+ VTF
Sbjct: 97 NRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTF 156
Query: 151 SILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGE 210
+ L+ YC + +A+ L ++ GF P+VVT T ++ LC + AVE+ + G
Sbjct: 157 TSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGT 216
Query: 211 QGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWN 270
G PNV TYN L++ CE G A + DM I N
Sbjct: 217 NGSR-------------------PNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPN 257
Query: 271 FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEY 330
+T+ LI G++ + ++ +M + + Y S++ GL DEA +
Sbjct: 258 VITFTALIDAFVKVGKLMEAKELYNVM--IQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 331 LKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQ 388
ME+ +P V + I GFC VED + F +M ++G V N + Y LI YC
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCL 375
Query: 389 EERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPG 448
R A E+ +M+ P T+N +L GLC G V AL ++ E MR R
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL-MIFEYMR--KREMDIN 432
Query: 449 SGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ +I+ +C+ G + A L + KG+ P+ +T+ +++
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 7/196 (3%)
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK-RCF 364
S Y +L Q ++AL+ +M + P +D + ++L N D F
Sbjct: 48 FSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFT-RLLSVIAKMNRYDVVISLF 106
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+QM G P + + ++H C + AS + +M G+ P TF ++L+G C
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 425 GNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
+ A+ L ++ + G G P Y+ LI+ LC+ A L QM G P+
Sbjct: 167 NRIEDAIALFDQIL---GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 485 LTWNSLLICLSQQTTW 500
+T+N+L+ L + W
Sbjct: 224 VTYNALVTGLCEIGRW 239
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 201/426 (47%), Gaps = 28/426 (6%)
Query: 5 IQSPPDESI--FITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDID 62
IQS P SI F V+ + +++ + V+ + + L +N +++ L +
Sbjct: 61 IQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRF 120
Query: 63 LARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTL 122
+ KMM G + D T + L+ G C NRV D L+ M+ G +P+ VIYNT+
Sbjct: 121 VIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTI 180
Query: 123 IHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF 178
I CK G V A L ME + VT++ L+ C +A L+
Sbjct: 181 IDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
VP+V+T T V+++ G+ +A+++ EE M R+ P+V T
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEE-------------------MTRRCVDPDVFT 281
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YN LI+ C G +D A + + M G + VTY+TLI G C R+D+G K+ + M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREM- 340
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVE 358
++ G G YN+++ G ++ + D A E +M+ P S+ + G C++ VE
Sbjct: 341 -AQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-PNIRTYSILLYGLCMNWRVE 398
Query: 359 DAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVL 418
A F+ M + ++ Y+ +IH C+ V +A +L + ++ G P ++ T++
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 419 SGLCRQ 424
SG CR+
Sbjct: 459 SGFCRK 464
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 189/383 (49%), Gaps = 37/383 (9%)
Query: 114 PNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVL 169
P+ V ++ ++ + K+ SL ME + +++I+I C+ V AL +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 170 LEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMER 229
+ K FG+ PDVVT++ ++ C RV DA++++ + ME
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK-------------------MEE 167
Query: 230 KGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDD 289
G P+V YN +I C+ G+++ A+++F+ M+ DG+ + VTY++L+ GLC GR D
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 290 GLKILQ--LMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRS 345
++++ +M D + + +V+ +E + EA++ ++M + + P +
Sbjct: 228 AARLMRDMVMRDIVPN----VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 346 LKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C+ G V++AK+ D M+ +G +P+VV Y+ LI+ +C+ +RV E ++L +EM
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G + T+NT++ G + G A ++ S P YS L+ LC
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSR------MDSRPNIRTYSILLYGLCMNWRV 397
Query: 466 QSASMLLVQMVGKGILPDYLTWN 488
+ A +L M I D T+N
Sbjct: 398 EKALVLFENMQKSEIELDITTYN 420
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 187/403 (46%), Gaps = 32/403 (7%)
Query: 103 LLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYC 158
L H M+ G+ + YN +I+ LC+ + A S++ M EP+ VT S LI +C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 159 KEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRL---- 214
+ + +A+ L+ K GF PDVV +++ C +G V DAVE+ + G
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 215 ------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDM 262
G+ R +++M + +PNV T+ +I + + G A+ ++ +M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 263 KIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYREN 322
+ + TY++LI GLC GR+D+ ++L LM +G + YN+++ G +
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM--VTKGCLPDVVTYNTLINGFCKSK 328
Query: 323 QQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYD 380
+ DE + ++M + L + + I G+ G + A+ F +M PN+ Y
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYS 385
Query: 381 CLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG 440
L++ C RV +A L + M +T+N V+ G+C+ GNV A L R
Sbjct: 386 ILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDL----FRS 441
Query: 441 IG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ +G P Y+ +I C K + + +L +M G+LP
Sbjct: 442 LSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFN 415
N+E+ F +MI+ +P++V + ++ + + L M G ++N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 416 TVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM 475
V++ LCR AL +V + M+ G P S LI C+ A L+ +M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKF---GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 476 VGKGILPDYLTWNSLL 491
G PD + +N+++
Sbjct: 166 EEMGFRPDVVIYNTII 181
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 135/499 (27%), Positives = 231/499 (46%), Gaps = 39/499 (7%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFY 68
+E + TV+ GL R + + D V ++ PS+ FNSI+ K +D+A++F+
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ G+ Y++ IL+ GLCL + + +L M GV+P+SV YN L
Sbjct: 288 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 346
Query: 129 NGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGF-VPDVV 183
G + A ++ DM + P+ +T++IL+C C+ N+ LVLL+ S GF + ++
Sbjct: 347 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 406
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ +L LC GR+ +A+ + +M+ G P++ Y+I+I
Sbjct: 407 PCSVMLSGLCKTGRIDEALSLF-------------------NQMKADGLSPDLVAYSIVI 447
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
C+ G D AL ++++M I N T+ L+ GLC G + + +L + S G
Sbjct: 448 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS--G 505
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAK 361
I YN V+ G + +EALE K + + + P + I G+C N+ +A+
Sbjct: 506 ETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEAR 565
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ D + G P+VV Y L+ AY + EL +EM G P T++ + GL
Sbjct: 566 KILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGL 625
Query: 422 CR---QGNVGTAL--KLVEEDMRGI----GRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
CR N L ++ E+ +G+ G P Y+ +I+ LC A + L
Sbjct: 626 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 685
Query: 473 VQMVGKGILPDYLTWNSLL 491
M + + T+N L+
Sbjct: 686 EIMKSRNLDASSATYNILI 704
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 218/489 (44%), Gaps = 68/489 (13%)
Query: 22 GRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED--IDLARAFYRKKMMASGVQG 79
R RM++D + + N+ S + +NS+L + D D+ + K
Sbjct: 177 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK--------- 227
Query: 80 DDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLM 139
+++TY+ ++ GLC ++ D L + + + P+ V +N+++ CK G V A+S
Sbjct: 228 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 287
Query: 140 SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
++L C G VP V + ++ LC VG +
Sbjct: 288 C----------TVLKC---------------------GLVPSVYSHNILINGLCLVGSIA 316
Query: 200 DAVEILEESGEQG----------------RLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+A+E+ + + G LG + G +++M KG P+V TY IL+
Sbjct: 317 EALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILL 376
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWN-FVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
C+ G +D L + DM G N + ++ GLC GRID+ L + M+ +
Sbjct: 377 CGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMK--AD 434
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDA 360
G + Y+ V++GL + + D AL +M +++ P + +LG C G + +A
Sbjct: 435 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 494
Query: 361 KRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSG 420
+ D +I G ++V+Y+ +I Y + + EA EL K + G P +TFN+++ G
Sbjct: 495 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 554
Query: 421 LCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C+ N+ A K+++ + G+ P Y+ L+ A G +S L +M +G
Sbjct: 555 YCKTQNIAEARKILDVIKLYGLA----PSVVSYTTLMDAYANCGNTKSIDELRREMKAEG 610
Query: 480 ILPDYLTWN 488
I P +T++
Sbjct: 611 IPPTNVTYS 619
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 197 RVMDAVEILEESGEQGRLGKVKGGCR---------FLKEMERKGCLPNVDTYNILISSYC 247
++ D + +++ E V G CR FL+ E K P+V ++N ++S YC
Sbjct: 216 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 275
Query: 248 ETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGR 307
+ G +D A F + G+ + +++ LI GLC G I + L++ + + +K
Sbjct: 276 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL------ASDMNKHG 329
Query: 308 ISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQM 367
+ P +SV Y + + GF + G + A M
Sbjct: 330 VEP-DSVTYNILAK----------------------------GFHLLGMISGAWEVIRDM 360
Query: 368 IEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGY-LPIASTFNTVLSGLCRQGN 426
+++G P+V+ Y L+ CQ + L+K+M G+ L + +LSGLC+ G
Sbjct: 361 LDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGR 420
Query: 427 VGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
+ AL L + M+ G P YS +I LC+ G F A L +M K ILP+ T
Sbjct: 421 IDEALSLFNQ-MKADGLS--PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 477
Query: 487 WNSLLICLSQQ 497
+LL+ L Q+
Sbjct: 478 HGALLLGLCQK 488
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 159/405 (39%), Gaps = 46/405 (11%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + VI GL + + + D + + P+ + ++L L ++ + L
Sbjct: 438 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 497
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++SG D Y I++ G + + + +L V+ G+ P+ +N+LI+ CK
Sbjct: 498 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 557
Query: 129 NGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
+ AR ++ ++ P+ V+++ L+ AY N + L + + G P VT
Sbjct: 558 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 617
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
+ + + LC + + +L E K K G L++ME +G P+ TYN +I
Sbjct: 618 YSVIFKGLCRGWKHENCNHVLRER----IFEKCKQG---LRDMESEGIPPDQITYNTIIQ 670
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C L A MK + + TY+ LI LC G I
Sbjct: 671 YLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA-------------- 716
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
+S +Y L +N Y + I CV G+ E A + F
Sbjct: 717 -------DSFIYSLQEQNVSLSKFAY--------------TTLIKAHCVKGDPEMAVKLF 755
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLP 409
Q++ G ++ Y +I+ C+ V E+ M G P
Sbjct: 756 HQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISP 800
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 8/175 (4%)
Query: 8 PPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-VKEDIDLARA 66
PPD+ + T+I+ L R + ++ +++ N+ S +N ++D L V I A +
Sbjct: 659 PPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADS 718
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F + V + Y L+K C+ KL H + RG + Y+ +I+ L
Sbjct: 719 FIY-SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 777
Query: 127 CKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
C+ V ++ M ++ + IC E ++ + LL + +G +PD
Sbjct: 778 CRRHLVNESKFFFCLMLSQG-ISPDLDIC-----EVMIKSDELLSWTIKWGLLPD 826
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 222/477 (46%), Gaps = 31/477 (6%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKKMMAS 75
++R +N+ V + +TPS N +L++ V+ I+ A + +M
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVF-DEMSVR 211
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
GV D +Y +++ G ++ + + L M RG P++ ++ +LC+NG V RA
Sbjct: 212 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 271
Query: 136 ----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
R ++ +PN + F+ LI CK+ ++ A +LE+ G+ P+V T T +++
Sbjct: 272 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC G A + FLK + PNV TY +I YC+
Sbjct: 332 LCKRGWTEKAFRL------------------FLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
L+ A +F+ MK G+ N TY TLI G C G +++ LM D EG I Y
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD--EGFMPNIYTY 431
Query: 312 NSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N+ + L ++++ EA E L + L V ++ I C ++ A F +M +
Sbjct: 432 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 491
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
G ++ + + LI A+C++++++E+ L + + G +P T+ +++S C++G++
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
ALK R G +P S Y LI LC+K A L M+ +G+ P +T
Sbjct: 552 ALKYFHNMKR---HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 127/512 (24%), Positives = 215/512 (41%), Gaps = 38/512 (7%)
Query: 9 PDESIFITVIRGLGRARMINDVVK-ATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF 67
PD S + ++ G R I + + T ++ R P IL L + + +
Sbjct: 215 PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTALCENGLVNRAIW 273
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
Y +KM+ G + + + L+ GLC + F++L M G KPN + LI LC
Sbjct: 274 YFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 128 KNGKVGRARSLM-----SDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K G +A L SD +PN T++ +I YCKE+ L A +L + G P+V
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNIL 242
T T ++ C G A E++ G++G + PN+ TYN
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEGFM-------------------PNIYTYNAA 434
Query: 243 ISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKE 302
I S C+ A ++ N G+ + VTY LI+ C I+ L M +K
Sbjct: 435 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM--NKT 492
Query: 303 GSKGRISPYNSVLYGLYRENQQDEALEYLKQME---KLFPRAVDRSLKILGFCVDGNVED 359
G + + N ++ R+ + E+ E L Q+ L P + I +C +G+++
Sbjct: 493 GFEADMRLNNILIAAFCRQKKMKES-ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A + F M G VP+ Y LI C++ V EA +L + M G P T T+
Sbjct: 552 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAY 611
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 479
C++ + A+ L+E + + ++ L++ LC + A++ +++ K
Sbjct: 612 EYCKRNDSANAMILLEPLDKKLWIRTV------RTLVRKLCSEKKVGVAALFFQKLLEKD 665
Query: 480 ILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
D +T + S+ L+ L E +S
Sbjct: 666 SSADRVTLAAFTTACSESGKNNLVTDLTERIS 697
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 46/326 (14%)
Query: 204 ILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMK 263
+L E GRL + G + +M+ +G P+ T N ++ E G+++ A +VF++M
Sbjct: 153 MLRNFSEIGRLNEAVG---MVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMS 209
Query: 264 IDGISWNFVTYDTLIRG-----------------------------------LCSGGRID 288
+ G+ + +Y ++ G LC G ++
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSL 346
+ + M D G K + + S++ GL ++ +A E L++M + P +
Sbjct: 270 RAIWYFRKMIDL--GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 347 KILGFCVDGNVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGH 405
I G C G E A R F +++ PNV Y +I YC+E+++ A L M
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 406 GYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGF 465
G P +T+ T+++G C+ G+ G A +L+ ++ G G +P Y+ I +LC+K
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELM--NLMG-DEGFMPNIYTYNAAIDSLCKKSRA 444
Query: 466 QSASMLLVQMVGKGILPDYLTWNSLL 491
A LL + G+ D +T+ L+
Sbjct: 445 PEAYELLNKAFSCGLEADGVTYTILI 470
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 6/135 (4%)
Query: 365 DQMIEEGGVPNV-VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR 423
D ++ G + + C++ + + R+ EA ++ +M G P + T N VL
Sbjct: 135 DSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVE 194
Query: 424 QGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
G + A + +E +RG+ +P S Y ++ G Q A L M+ +G +P
Sbjct: 195 LGLIEYAENVFDEMSVRGV----VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIP 250
Query: 483 DYLTWNSLLICLSQQ 497
D T +L L +
Sbjct: 251 DNATCTLILTALCEN 265
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 214/438 (48%), Gaps = 33/438 (7%)
Query: 61 IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYN 120
IDL +R+ M+ SGV+ Y+ I+++GLC V KL+ +G+KP + YN
Sbjct: 205 IDLCLEIFRR-MVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYN 263
Query: 121 TLIHSLCK----NGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSF 176
T+I++ K +G G + + D N VT+++L+ K + +A L ++
Sbjct: 264 TIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER 323
Query: 177 GFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNV 236
G DV T ++ C R G +K E+ KG P+
Sbjct: 324 GIESDVHVYTSLISWNC-------------------RKGNMKRAFLLFDELTEKGLSPSS 364
Query: 237 DTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQL 296
TY LI C+ G + +A + N+M+ G++ V ++TLI G C G +D+ I +
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDV 424
Query: 297 MEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVD 354
ME ++G + + N++ R + DEA ++L +M + + V + I +C +
Sbjct: 425 ME--QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE 482
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
GNVE+AKR F +M +G PN + Y+ +I+AYC++ +++EA +L M +G P + T+
Sbjct: 483 GNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTY 542
Query: 415 NTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLV 473
+++ G C NV A++L E ++G+ + S+ Y+ +I L + G A L
Sbjct: 543 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT----YTVMISGLSKAGKSDEAFGLYD 598
Query: 474 QMVGKGILPDYLTWNSLL 491
+M KG D + +L+
Sbjct: 599 EMKRKGYTIDNKVYTALI 616
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 7/287 (2%)
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
R G+V+ + +KE KG P TYN +I++Y + V MK DG+ +N V
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLK 332
TY L+ G++ D K+ M + G + + Y S++ R+ A
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRE--RGIESDVHVYTSLISWNCRKGNMKRAFLLFD 353
Query: 333 QMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEE 390
++ + L P + I G C G + A+ ++M +G V+++ LI YC++
Sbjct: 354 ELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKG 413
Query: 391 RVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSG 450
V EAS + M G+ T NT+ S R A + + M G G +
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG---GVKLSTV 470
Query: 451 HYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
Y+ LI C++G + A L V+M KG+ P+ +T+N ++ +Q
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQ 517
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 25/241 (10%)
Query: 48 IFNSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHV 106
+FN+++D ++ +D A Y M G Q D +T + R + + L
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIY-DVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEEN 162
M GVK ++V Y LI CK G V A+ L +M +PN +T++++I AYCK+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ A L + G PD T T ++ C V +A+ R
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM-------------------R 560
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
EM KG N TY ++IS + G D A ++++MK G + + Y LI +
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Query: 283 S 283
S
Sbjct: 621 S 621
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 6/205 (2%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKK 71
+F T+I G R M+++ D++ + + N+I + + D A+ + +
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR- 459
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
MM GV+ +Y L+ C V + +L M S+GV+PN++ YN +I++ CK GK
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 132 VGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITK 187
+ AR L ++ME +P+ T++ LI C +N+ A+ L + G + VT T
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 188 VLELLCSVGRVMDAVEILEESGEQG 212
++ L G+ +A + +E +G
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 130/310 (41%), Gaps = 50/310 (16%)
Query: 240 NILISSYCETGVLDSALDVFNDM-----------------------KID----------- 265
+++ Y + G+ + L VF+ M +ID
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 266 -GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ + ++ GLC G ++ K+++ E S +G K YN+++ ++
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIK--EFSVKGIKPEAYTYNTIINAYVKQRDF 275
Query: 325 DEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
LK M+K + V +L + +G + DA++ FD+M E G +V +Y L
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSL 335
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGI 441
I C++ ++ A L E+T G P + T+ ++ G+C+ G +G A L+ E +G+
Sbjct: 336 ISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV 395
Query: 442 GRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS------ 495
+ ++ LI C KG ASM+ M KG D T N++ C +
Sbjct: 396 NITQVV----FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 496 QQTTWLLLLL 505
+ WL ++
Sbjct: 452 EAKQWLFRMM 461
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 220/461 (47%), Gaps = 38/461 (8%)
Query: 10 DESIFITVIRGLGRARMINDVVKAT--DLVSR-FNMTPSLKIFNSILDVLVKEDI-DLAR 65
D + +I GL + R D K ++VS N+ P + ++ + V+ KE + + A+
Sbjct: 311 DNHTYSLLIDGLLKGRNA-DAAKGLVHEMVSHGINIKPYM--YDCCICVMSKEGVMEKAK 367
Query: 66 AFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHS 125
A + M+ASG+ YA L++G C V G++LL MK R + + Y T++
Sbjct: 368 ALF-DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 126 LCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPD 181
+C +G + A +++ +M PN V ++ LI + + +A+ +L++ G PD
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 182 VVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNI 241
+ ++ L R+ +A FL EM G PN TY
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARS-------------------FLVEMVENGLKPNAFTYGA 527
Query: 242 LISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSK 301
IS Y E SA +M+ G+ N V LI C G++ + + M D
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD-- 585
Query: 302 EGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVED 359
+G G Y ++ GL++ ++ D+A E ++M + + P + I GF GN++
Sbjct: 586 QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQK 645
Query: 360 AKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
A FD+M+EEG PNV+IY+ L+ +C+ + +A EL+ EM+ G P A T+ T++
Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Query: 420 GLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALC 460
G C+ G++ A +L +E M+ +G +P S Y+ L+ C
Sbjct: 706 GYCKSGDLAEAFRLFDE-MK--LKGLVPDSFVYTTLVDGCC 743
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 222/491 (45%), Gaps = 31/491 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + ++I G R + + + + + N+ S + +++ + D+D A
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M+ASG + + Y L+K +R GD ++L MK +G+ P+ YN+LI L
Sbjct: 440 V-KEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 128 KNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K ++ ARS + +M E PN T+ I Y + +A +++ G +P+ V
Sbjct: 499 KAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKV 558
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T ++ C G+V++A C + M +G L + TY +L+
Sbjct: 559 LCTGLINEYCKKGKVIEA-------------------CSAYRSMVDQGILGDAKTYTVLM 599
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + +D A ++F +M+ GI+ + +Y LI G G + I M +EG
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM--VEEG 657
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN +L G R + ++A E L +M + L P AV I G+C G++ +A
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
R FD+M +G VP+ +Y L+ C+ V A + G + FN +++ +
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWV 776
Query: 422 CRQGNVGTALKLVEEDMRG-IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGI 480
+ G +++ M G R P Y+ +I LC++G ++A L QM +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 481 LPDYLTWNSLL 491
+P +T+ SLL
Sbjct: 837 MPTVITYTSLL 847
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 193/429 (44%), Gaps = 30/429 (6%)
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
++ M+ G+ YTY +L+ GLC R+ D LL M S GV ++ Y+ LI L K
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 129 NGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
A+ L+ +M + IC KE + A L + + G +P
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++E C R V+ G L EM+++ + + TY ++
Sbjct: 385 YASLIEGYC-------------------REKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGS 304
C +G LD A ++ +M G N V Y TLI+ R D +++L+ M++ +G
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE--QGI 483
Query: 305 KGRISPYNSVLYGLYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKR 362
I YNS++ GL + + DEA +L +M + L P A I G+ A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 363 CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLC 422
+M E G +PN V+ LI+ YC++ +V EA + M G L A T+ +++GL
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 423 RQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 482
+ V A ++ E MR G+G P Y LI + G Q AS + +MV +G+ P
Sbjct: 604 KNDKVDDAEEIFRE-MR--GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 483 DYLTWNSLL 491
+ + +N LL
Sbjct: 661 NVIIYNMLL 669
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 227/507 (44%), Gaps = 33/507 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
P+ I+ T+I+ + D ++ + + P + +NS++ L K + +D AR+F
Sbjct: 450 PNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSF 509
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ M+ +G++ + +TY + G + K + M+ GV PN V+ LI+ C
Sbjct: 510 LVE-MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYC 568
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K GKV A S M + + T+++L+ K + + +A + + G PDV
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
+ ++ +G + A I +E E+G R G+++ L EM
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 228 ERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRI 287
KG PN TY +I YC++G L A +F++MK+ G+ + Y TL+ G C R+
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC---RL 745
Query: 288 DDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ-MEKLF-----PRA 341
+D + + + +K+G +P+N+++ +++ + + E L + M+ F P
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
V ++ I C +GN+E AK F QM +P V+ Y L++ Y + R E + E
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE--DMRGIGRGSLPGSGHYSPLIKAL 459
G P ++ +++ ++G AL LV++ + G L+
Sbjct: 866 AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 460 CEKGGFQSASMLLVQMVGKGILPDYLT 486
+ G + A ++ MV +PD T
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 193/442 (43%), Gaps = 52/442 (11%)
Query: 94 TNRVGDGFKLLHVMK---SRGVKPNSV-IYNTLIHSLCKNGKVGRARSLMSDMEEPN--- 146
+ RV D KLL S+ V + ++ L LC G +A S++ M E N
Sbjct: 71 SKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPV 130
Query: 147 -DVTFSILICA---YCKEENLVNALVLLEKSFSFGFVPDVVTI---TKVLELLCSVGRVM 199
+V SI+ C+ K ++ V +L + + G++ + V + + LEL+ + R
Sbjct: 131 AEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCK 190
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVL------- 252
++ L R ++ K M + + +V TY++LI ++C G +
Sbjct: 191 VLLDALL------RWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL 244
Query: 253 --------------DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
D AL + M G+ TYD LI GLC R++D +L M+
Sbjct: 245 FKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQME----KLFPRAVDRSLKILGFCVD 354
G Y+ ++ GL + D A + +M + P D + ++ +
Sbjct: 305 SL--GVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMS--KE 360
Query: 355 GNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
G +E AK FD MI G +P Y LI YC+E+ VR+ EL+ EM + T+
Sbjct: 361 GVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTY 420
Query: 415 NTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQ 474
TV+ G+C G++ A +V+E I G P Y+ LIK + F A +L +
Sbjct: 421 GTVVKGMCSSGDLDGAYNIVKE---MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKE 477
Query: 475 MVGKGILPDYLTWNSLLICLSQ 496
M +GI PD +NSL+I LS+
Sbjct: 478 MKEQGIAPDIFCYNSLIIGLSK 499
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 27/361 (7%)
Query: 71 KMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNG 130
KM+ G + D T L+ G C NRV D L+ M G KP+ V YN +I SLCK
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 131 KVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 186
+V A ++E PN VT++ L+ C +A LL P+V+T +
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 187 KVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSY 246
+L+ G+V++A E+ E EM R P++ TY+ LI+
Sbjct: 265 ALLDAFVKNGKVLEAKELFE-------------------EMVRMSIDPDIVTYSSLINGL 305
Query: 247 CETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKG 306
C +D A +F+ M G + V+Y+TLI G C R++DG+K+ + M S+ G
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQRGLVS 363
Query: 307 RISPYNSVLYGLYRENQQDEALEYLKQME--KLFPRAVDRSLKILGFCVDGNVEDAKRCF 364
YN+++ G ++ D+A E+ QM+ + P ++ + G C +G +E A F
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 365 DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQ 424
+ M + ++V Y +I C+ +V EA L ++ G P T+ T++SGLC +
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 425 G 425
G
Sbjct: 484 G 484
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 38/395 (9%)
Query: 107 MKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEEN 162
M+ G++ + +N +I+ C +V A S++ M EP+ VT L+ +C+
Sbjct: 111 MEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNR 170
Query: 163 LVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCR 222
+ +A+ L++K G+ PD+V +++ LC RV DA +
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD------------------- 211
Query: 223 FLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLC 282
F KE+ERKG PNV TY L++ C + A + +DM I+ N +TY L+
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 283 SGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEALEYLKQM--EK 336
G K+L+ E +E + I P Y+S++ GL ++ DEA + M +
Sbjct: 272 KNG------KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 337 LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
V + I GFC VED + F +M + G V N V Y+ LI + Q V +A
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQ 385
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLI 456
E +M G P T+N +L GLC G + AL ++ EDM+ R Y+ +I
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL-VIFEDMQK--REMDLDIVTYTTVI 442
Query: 457 KALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ +C+ G + A L + KG+ PD +T+ +++
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 202/424 (47%), Gaps = 39/424 (9%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAF 67
PD +++ G R ++D V D + P + +N+I+D L K + ++ A F
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K++ G++ + TY L+ GLC ++R D +LL M + + PN + Y+ L+ +
Sbjct: 213 F-KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
KNGKV A+ L +M +P+ VT+S LI C + + A + + S G + DVV
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
+ ++ C RV D G + +EM ++G + N TYN LI
Sbjct: 332 SYNTLINGFCKAKRVED-------------------GMKLFREMSQRGLVSNTVTYNTLI 372
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ + G +D A + F+ M GIS + TY+ L+ GLC G ++ L I + M+ K
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQ--KRE 430
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYL--KQMEKLFPRAVDRSLKILGFCVDGNVEDAK 361
I Y +V+ G+ + + +EA ++ L P V + + G C G + + +
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGL 421
+ +M +EG + N DC + + + ++EL+K+M GY P S + SG+
Sbjct: 491 ALYTKMKQEGLMKN----DCTL----SDGDITLSAELIKKMLSCGYAP--SLLKDIKSGV 540
Query: 422 CRQG 425
C++
Sbjct: 541 CKKA 544
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 40/407 (9%)
Query: 96 RVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---PNDV-TFS 151
++ D L M P+ V +N L+ ++ K K SL ME ND+ TF+
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 152 ILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQ 211
I+I +C + AL +L K G+ PD VTI ++ C RV DAV ++++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK---- 180
Query: 212 GRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNF 271
M G P++ YN +I S C+T ++ A D F +++ GI N
Sbjct: 181 ---------------MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 225
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEA 327
VTY L+ GLC+ R D ++L M K +I+P Y+++L + + EA
Sbjct: 226 VTYTALVNGLCNSSRWSDAARLLSDM------IKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 328 LEYLKQMEKLF--PRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHA 385
E ++M ++ P V S I G C+ +++A + FD M+ +G + +VV Y+ LI+
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 386 YCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRG 444
+C+ +RV + +L +EM+ G + T+NT++ G + G+V A + + D GI
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS-- 397
Query: 445 SLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P Y+ L+ LC+ G + A ++ M + + D +T+ +++
Sbjct: 398 --PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 7/184 (3%)
Query: 320 RENQQDEALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN-V 376
R+ + ++A++ M K FP VD + ++L V D + +E G+ N +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFN-RLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 377 VIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE 436
++ +I+ +C +V A ++ +M GY P T ++++G CR+ V A+ LV+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD- 179
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
+ + G P Y+ +I +LC+ A ++ KGI P+ +T+ +L+ L
Sbjct: 180 --KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 497 QTTW 500
+ W
Sbjct: 238 SSRW 241
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 217/482 (45%), Gaps = 65/482 (13%)
Query: 25 RMINDVVKATDLVSRFNMTPSLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYT 83
R+++ V+ ++++ ++ P ++ +++L LVK LA + M++ G++ D Y
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF-NDMVSVGIRPDVYI 229
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
Y +++ LC + +++ M++ G N V YN LI LCK KV A + D+
Sbjct: 230 YTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA 289
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+P+ VT+ L+ CK + L ++++ F P ++ ++E L G++
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
+A+ ++ K + G PN+ YN LI S C+ A +F
Sbjct: 350 EALNLV-------------------KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+ M G+ N VTY LI C G++D L L M D+ G K + PYNS+
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT--GLKLSVYPYNSL----- 443
Query: 320 RENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIY 379
I G C G++ A+ +MI + P VV Y
Sbjct: 444 ----------------------------INGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Query: 380 DCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMR 439
L+ YC + ++ +A L EMTG G P TF T+LSGL R G + A+KL E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE 535
Query: 440 GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 497
+ P Y+ +I+ CE+G A L +M KGI+PD ++ L+ +CL+ Q
Sbjct: 536 WNVK---PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 498 TT 499
+
Sbjct: 593 AS 594
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 143/593 (24%), Positives = 257/593 (43%), Gaps = 85/593 (14%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVL-----VKEDIDL 63
PD + T++ GL + + ++ D + +PS +S+++ L ++E ++L
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
K+++ GV + + Y L+ LC + + L M G++PN V Y+ LI
Sbjct: 355 V-----KRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 124 HSLCKNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
C+ GK+ A S + +M + + ++ LI +CK ++ A + + +
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRF 223
P VVT T ++ CS G++ A+ + E +G R G ++ +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
EM PN TYN++I YCE G + A + +M GI + +Y LI GLC
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISP--YNSVLYGLYRENQQDEALEYLKQMEKLFPRA 341
G+ + ++ D ++ Y +L+G RE + +EAL ++M + R
Sbjct: 590 TGQASEA----KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ---RG 642
Query: 342 VDRSLKILGFCVDGNVEDAKR-----CFDQMIEEGGVPNVVIYDCLIHAYCQEERVREAS 396
VD L G +DG+++ R +M + G P+ VIY +I A + +EA
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 397 ELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV---------------------- 434
+ M G +P T+ V++GLC+ G V A L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 435 ---EEDMR-------GIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDY 484
E DM+ I +G L + Y+ LI+ C +G + AS L+ +M+G G+ PD
Sbjct: 763 TKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 485 LTWNSLLICLSQQTTWLLLLLLNEMVSFVMVVHELSAKEKRCKLRSLNHLAHG 537
+T+ +++ L ++ N++ + + + ++ K R + N L HG
Sbjct: 823 ITYTTMINELCRR---------NDVKKAIELWNSMTEKGIRPDRVAYNTLIHG 866
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 198/468 (42%), Gaps = 74/468 (15%)
Query: 45 SLKIFNSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKL 103
S+ +NS+++ K DI A F +M+ ++ TY LM G C ++ +L
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFM-AEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 104 LHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCK 159
H M +G+ P+ + TL+ L + G + A L ++M E PN VT++++I YC+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 160 EENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILE-------ESGEQG 212
E ++ A L++ G VPD + ++ LC G+ +A ++ E E
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 213 RLGKVKGGCR--------------------------------------------FLKEME 228
G + G CR LKEM
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 229 RKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRID 288
+G P+ Y +I + +TG A +++ M +G N VTY +I GLC G ++
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 289 DGLKILQLMEDSKEGSKGRISPYNSVLYGLYR------ENQQDEALEYLKQMEK-LFPRA 341
+ + M+ S N V YG + E +A+E + K L
Sbjct: 735 EAEVLCSKMQPVS-------SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT 787
Query: 342 VDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKE 401
++ I GFC G +E+A +MI +G P+ + Y +I+ C+ V++A EL
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 402 MTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
MT G P +NT++ G C G +G A +L E +R +G +P +
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR---QGLIPNN 892
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 29/418 (6%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P F T++ GL RA +I D VK + ++ +N+ P+ +N +++ +E D+++AF
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG-DMSKAFE 563
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ K+M G+ D Y+Y L+ GLCLT + + + + + N + Y L+H C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 128 KNGKVGRARSLMSDMEEP----NDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ GK+ A S+ +M + + V + +LI K ++ LL++ G PD V
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILI 243
T +++ G +A I + M +GC+PN TY +I
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDL-------------------MINEGCVPNEVTYTAVI 724
Query: 244 SSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEG 303
+ C+ G ++ A + + M+ N VTY + L G D K ++L +G
Sbjct: 725 NGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV--DMQKAVELHNAILKG 782
Query: 304 SKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAK 361
+ YN ++ G R+ + +EA E + +M + + P + + I C +V+ A
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 362 RCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLS 419
++ M E+G P+ V Y+ LIH C + +A+EL EM G +P T T S
Sbjct: 843 ELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTS 900
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 42/289 (14%)
Query: 274 YDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQ 333
+D LI+ R+ DG+ + ++M +K + +++L+GL + A+E
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMM-ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 334 MEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEER 391
M + P + I C ++ AK M G N+V Y+ LI C++++
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 392 VREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGH 451
V EA + K++ G P T+ T++ GLC+ L++++E + R S P
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEML--CLRFS-PSEAA 334
Query: 452 YSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWLLLLLLNEMVS 511
S L++ L ++G + A L+ ++V G+ P+ +N+L+ L
Sbjct: 335 VSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL----------------- 377
Query: 512 FVMVVHELSAKEKRCKLRSLNH---LAHGAGSVWLGLRIHDTTHTFIID 557
CK R + L G + GLR +D T++ +ID
Sbjct: 378 --------------CKGRKFHEAELLFDRMGKI--GLRPNDVTYSILID 410
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 237/503 (47%), Gaps = 36/503 (7%)
Query: 17 VIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF-YRKKMMAS 75
+++GL R V + R ++ P + +N+++ E +L +A +M S
Sbjct: 148 LLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC-EGKELEKALELANEMKGS 206
Query: 76 GVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRA 135
G T+ IL+ C ++ + L MK G++ + V+Y +LI C G++ R
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 136 RSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
++L ++ E P +T++ LI +CK L A + E G P+V T T +++
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 192 LCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGV 251
LC VG+ +A+++L M K PN TYNI+I+ C+ G+
Sbjct: 327 LCGVGKTKEALQLL-------------------NLMIEKDEEPNAVTYNIIINKLCKDGL 367
Query: 252 LDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPY 311
+ A+++ MK + +TY+ L+ GLC+ G +D+ K+L LM + + Y
Sbjct: 368 VADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISY 427
Query: 312 NSVLYGLYRENQQDEALE-YLKQMEKLFP-RAVDRSLKILGFCVDGNVEDAKRCFDQMIE 369
N++++GL +EN+ +AL+ Y +EKL V ++ + G+V A + Q+ +
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 370 EGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGT 429
V N Y +I +C+ + A L+ +M P +N +LS LC++G++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 430 ALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNS 489
A +L EE R + P ++ +I + G +SA LLV M G+ PD T++
Sbjct: 548 AWRLFEEMQRD---NNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 490 LLICLSQQTTWLLLLLLNEMVSF 512
L+ +L L L+E +SF
Sbjct: 605 LI------NRFLKLGYLDEAISF 621
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 145/560 (25%), Positives = 260/560 (46%), Gaps = 64/560 (11%)
Query: 50 NSILDVLVK-EDIDLARAFYRKKMMASGVQGDDYTYAILMKGL--CLTN--RVGDGFKLL 104
N+++ LV+ + +LA +FYRK + + D + + + GL C + G F +L
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKML-----ETDTFINFVSLSGLLECYVQMRKTGFAFGVL 130
Query: 105 HVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKE 160
+M RG N +N L+ LC+N + G+A SL+ +M P+ +++ +I +C+
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEG 190
Query: 161 ENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG-------- 212
+ L AL L + G +VT +++ C G++ +A+ L+E G
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 213 --------RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
G++ G E+ +G P TYN LI +C+ G L A ++F M
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
G+ N TY LI GLC G+ + L++L LM + E YN ++ L ++
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA--VTYNIIINKLCKDGLV 368
Query: 325 DEALEYLKQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGV--PNVVIYD 380
+A+E ++ M+K R + + IL G C G++++A + M+++ P+V+ Y+
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 381 CLIHAYCQEERVREA---SELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEED 437
LIH C+E R+ +A +L+ E G G T N +L+ + G+V A++L ++
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQ- 484
Query: 438 MRGIGRGSL-PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
I + S Y+ +I C+ G A LL +M + P +N LL L +
Sbjct: 485 ---ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 497 Q----TTWLLLLLLN------EMVSF-VMVVHELSAKEKRCKLRSLNHLAHGAGSVWLGL 545
+ W L + ++VSF +M+ L A + ++S L G GL
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD----IKSAESLLVGMSRA--GL 595
Query: 546 RIHDTTHTFIIDRRVEIGHV 565
T++ +I+R +++G++
Sbjct: 596 SPDLFTYSKLINRFLKLGYL 615
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 151/351 (43%), Gaps = 30/351 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
P+ + +I GL + ++ +L+ + P+ +N I++ L K+ +
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI 374
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVM--KSRGVKPNSVIYNTLIHSL 126
+ M + D+ TY IL+ GLC + + KLL++M S P+ + YN LIH L
Sbjct: 375 VELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGL 434
Query: 127 CKNGKVGRARS----LMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CK ++ +A L+ + + VT +IL+ + K ++ A+ L ++ V +
Sbjct: 435 CKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNS 494
Query: 183 VTITKVLELLCSVG-------------------RVMDAVEILEESGEQGRLGKVKGGCRF 223
T T +++ C G V D +L ++G L + R
Sbjct: 495 DTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ---AWRL 551
Query: 224 LKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCS 283
+EM+R P+V ++NI+I + G + SA + M G+S + TY LI
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLK 611
Query: 284 GGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM 334
G +D+ + M DS I +SVL + + D+ E +K++
Sbjct: 612 LGYLDEAISFFDKMVDSGFEPDAHIC--DSVLKYCISQGETDKLTELVKKL 660
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 215/437 (49%), Gaps = 36/437 (8%)
Query: 84 YAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDME 143
+ +L++ C V + + ++MK +G P + N ++ L + ++ A +DM
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 144 ----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVM 199
+ N TF+I+I CKE L A L FG P +VT +++ GR+
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI- 276
Query: 200 DAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVF 259
E RL + EM+ KG P++ TYN ++S C G A +V
Sbjct: 277 ----------EGARL--------IISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVL 315
Query: 260 NDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLY 319
+MK G+ + V+Y+ LIRG + G ++ M K+G YN++++GL+
Sbjct: 316 REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM--VKQGMVPTFYTYNTLIHGLF 373
Query: 320 RENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVV 377
EN+ + A ++++ + + +V ++ I G+C G+ + A D+M+ +G P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 378 IYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE- 436
Y LI+ C++ + REA EL +++ G G P NT++ G C GN+ A L++E
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 437 DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 496
DM I P Y+ L++ LC +G F+ A L+ +M +GI PD++++N+L+ S+
Sbjct: 494 DMMSIN----PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 497 Q-TTWLLLLLLNEMVSF 512
+ T ++ +EM+S
Sbjct: 550 KGDTKHAFMVRDEMLSL 566
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 232/504 (46%), Gaps = 61/504 (12%)
Query: 13 IFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLARAFYRKK 71
+F ++R + RM+++ ++ L+ P + N IL +L + + I+ A FY
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY-AD 215
Query: 72 MMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGK 131
M ++ + YT+ I++ LC ++ L +M+ G+KP V YNTL+ G+
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 132 VGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLEL 191
+ AR ++S+M+ S GF PD+ T +L
Sbjct: 276 IEGARLIISEMK-------------------------------SKGFQPDMQTYNPILSW 304
Query: 192 LCSVGRVMDAVEILEESGEQGRL----------------GKVKGGCRFLKEMERKGCLPN 235
+C+ GR A E+L E E G + G ++ + EM ++G +P
Sbjct: 305 MCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 236 VDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQ 295
TYN LI +++A + +++ GI + VTY+ LI G C G D K
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG---DAKKAFA 418
Query: 296 LMEDS-KEGSKGRISPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFC 352
L ++ +G + Y S++Y L R+N+ EA E +++ + + P V + + G C
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 353 VDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIAS 412
GN++ A +M P+ V Y+CL+ C E + EA ELM EM G P
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 413 TFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLL 472
++NT++SG ++G+ A +V ++M +G P Y+ L+K L + + A LL
Sbjct: 539 SYNTLISGYSKKGDTKHAF-MVRDEMLSLGFN--PTLLTYNALLKGLSKNQEGELAEELL 595
Query: 473 VQMVGKGILPDYLTWNSLLICLSQ 496
+M +GI+P+ ++ S++ +S
Sbjct: 596 REMKSEGIVPNDSSFCSVIEAMSN 619
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 120/277 (43%), Gaps = 23/277 (8%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFY 68
PD + +IRG + D + + M P+ +N+++ L E+ A
Sbjct: 325 PDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 69 RKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCK 128
+++ G+ D TY IL+ G C F L M + G++P Y +LI+ LC+
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCR 444
Query: 129 NGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVT 184
K A L + +P+ V + L+ +C N+ A LL++ PD VT
Sbjct: 445 KNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVT 504
Query: 185 ITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILIS 244
++ LC G+ +A E+ + EM+R+G P+ +YN LIS
Sbjct: 505 YNCLMRGLCGEGKFEEAREL-------------------MGEMKRRGIKPDHISYNTLIS 545
Query: 245 SYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGL 281
Y + G A V ++M G + +TY+ L++GL
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 272 VTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEALEYL 331
+ +D L+R C +D+ ++ LM++ +G + N +L L R N+ + A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKE--KGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 332 KQMEKLFPRAVDRSLKIL--GFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
M ++ ++ + I+ C +G ++ AK M G P +V Y+ L+ +
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
R+ A ++ EM G+ P T+N +LS +C +G L+ +M+ IG +P S
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR----EMKEIGL--VPDS 327
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
Y+ LI+ G + A +MV +G++P + T+N+L+
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAF- 67
P + + ++I L R + + + V M P L + N+++D ++ RAF
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIG-NMDRAFS 488
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
K+M + DD TY LM+GLC + + +L+ MK RG+KP+ + YNTLI
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 128 KNGKVGRARSLMSDM----EEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
K G A + +M P +T++ L+ K + A LL + S G VP+
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608
Query: 184 TITKVLELLCSV 195
+ V+E + ++
Sbjct: 609 SFCSVIEAMSNL 620
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 318 LYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMI---EEGGVP 374
LYR + Q + L + P+ V + LK + V + FD+++ +
Sbjct: 97 LYRLDFQTQCLAIAVISKLSSPKPVTQLLKEV---VTSRKNSIRNLFDELVLAHDRLETK 153
Query: 375 NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 434
+ +++D L+ CQ V EA E M G+ P T N +L+ L R + A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
+ R + ++ ++ +I LC++G + A L M GI P +T+N+L+
Sbjct: 214 ADMYRMEIKSNVYT---FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLV 267
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 212/465 (45%), Gaps = 53/465 (11%)
Query: 50 NSILDVLVKED-IDLARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK 108
N ++ V V+ + D+A + YRK M + + Y++ IL+K C +++ +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRK-MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT 168
Query: 109 SRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEEPNDVTFSILICAYCKEENLVNALV 168
G +P+ V +NTL+H LC ++ A +L Y E + A+
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALF----------------GYMVETGFLEAVA 212
Query: 169 LLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILEESGEQG---------------- 212
L ++ G P V+T ++ LC GRV++A ++ + +G
Sbjct: 213 LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMC 272
Query: 213 RLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKIDGISWNFV 272
++G K L +ME P+V Y+ +I C+ G A +F++M GI+ N
Sbjct: 273 KMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF 332
Query: 273 TYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISP----YNSVLYGLYRENQQDEAL 328
TY+ +I G CS GR D ++L+ M + + I+P +N+++ +E + EA
Sbjct: 333 TYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVLTFNALISASVKEGKLFEAE 386
Query: 329 EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 386
+ +M +FP V + I GFC +DAK FD M P+VV ++ +I Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVY 442
Query: 387 CQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSL 446
C+ +RV E +L++E++ G + +T+NT++ G C N+ A L +E I G
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE---MISHGVC 499
Query: 447 PGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 491
P + + L+ CE + A L + I D + +N ++
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/498 (26%), Positives = 226/498 (45%), Gaps = 52/498 (10%)
Query: 37 VSRFNMTPSLKIFNSILDVLVKED-IDLARAFY--------------RKKMMASGVQGDD 81
+++ P + FN++L L ED I A A + +M+ G+
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVV 226
Query: 82 YTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSD 141
T+ L+ GLCL RV + L++ M +G+ + V Y T+++ +CK G A +L+S
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSK 286
Query: 142 MEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGR 197
MEE P+ V +S +I CK+ + +A L + G P+V T +++ CS GR
Sbjct: 287 MEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Query: 198 VMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALD 257
DA R L++M + P+V T+N LIS+ + G L A
Sbjct: 347 WSDAQ-------------------RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 258 VFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYG 317
+ ++M I + VTY+++I G C R DD + LM + + +N+++
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM------ASPDVVTFNTIIDV 441
Query: 318 LYRENQQDEALEYLKQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPN 375
R + DE ++ L+++ + L + I GFC N+ A+ F +MI G P+
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 376 VVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV- 434
+ + L++ +C+ E++ EA EL + + +N ++ G+C+ V A L
Sbjct: 502 TITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFC 561
Query: 435 EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLI-C 493
+ G+ P Y+ +I C K A++L +M G PD T+N+L+ C
Sbjct: 562 SLPIHGVE----PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 494 LSQQTTWLLLLLLNEMVS 511
L + L++EM S
Sbjct: 618 LKAGEIDKSIELISEMRS 635
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 213/464 (45%), Gaps = 34/464 (7%)
Query: 29 DVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYAILM 88
+ V D + +TP + FN++++ L E L A KM+ G+ D TY ++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 89 KGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKVGRARSLMSDMEE---- 144
G+C LL M+ +KP+ VIY+ +I LCK+G A+ L S+M E
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 145 PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEI 204
PN T++ +I +C +A LL PDV+T +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA----------------L 372
Query: 205 LEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETGVLDSALDVFNDMKI 264
+ S ++G+L + + C EM + P+ TYN +I +C+ D A +F+ M
Sbjct: 373 ISASVKEGKLFEAEKLC---DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA- 428
Query: 265 DGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQ 324
S + VT++T+I C R+D+G+++L+ E S+ G + YN++++G +
Sbjct: 429 ---SPDVVTFNTIIDVYCRAKRVDEGMQLLR--EISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 325 DEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCL 382
+ A + ++M + P + ++ + GFC + +E+A F+ + + V Y+ +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 383 IHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIG 442
IH C+ +V EA +L + HG P T+N ++SG C + + A L + M+
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK-MK--D 600
Query: 443 RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 486
G P + Y+ LI+ + G + L+ +M G D T
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 196/411 (47%), Gaps = 37/411 (9%)
Query: 16 TVIRGLGRARMINDVVKATDLVSRFNMT---PSLKIFNSILDVLVKEDIDLARAFYRKKM 72
T++ G+ + + D A +L+S+ T P + I+++I+D L K+ + +M
Sbjct: 266 TIVNGMCK---MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 73 MASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKNGKV 132
+ G+ + +TY ++ G C R D +LL M R + P+ + +N LI + K GK+
Sbjct: 323 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 133 GRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKV 188
A L +M P+ VT++ +I +CK +A + F PDVVT +
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTI 438
Query: 189 LELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISSYCE 248
+++ C R +V G + L+E+ R+G + N TYN LI +CE
Sbjct: 439 IDVYC-------------------RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
L++A D+F +M G+ + +T + L+ G C ++++ L++ ++++ SK
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD--T 537
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQ 366
YN +++G+ + ++ DEA + + + P ++ I GFC + DA F +
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 367 MIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTV 417
M + G P+ Y+ LI + + ++ EL+ EM +G+ A T V
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 6/216 (2%)
Query: 5 IQSPPDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDL 63
+ + PD F T+I RA+ +++ ++ +SR + + +N+++ + D ++
Sbjct: 426 LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
A+ + ++M++ GV D T IL+ G C ++ + +L V++ + ++V YN +I
Sbjct: 486 AQDLF-QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFV 179
H +CK KV A L + EP+ T++++I +C + + +A VL K G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 180 PDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLG 215
PD T ++ G + ++E++ E G G
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 238/528 (45%), Gaps = 63/528 (11%)
Query: 10 DESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKEDIDLARAFYR 69
D + ++T+ + L + A + F + +N ++ +L+K
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 70 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLCKN 129
++M+ G + TY+ LM GL + LL M++ G+KPN + I L +
Sbjct: 212 RRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRA 271
Query: 130 GKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTI 185
GK+ A ++ M++ P+ VT+++LI A C L A + EK + PD VT
Sbjct: 272 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY 331
Query: 186 TKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYNILISS 245
+L+ S R +D+V+ +F EME+ G +P+V T+ IL+ +
Sbjct: 332 ITLLDRF-SDNRDLDSVK------------------QFWSEMEKDGHVPDVVTFTILVDA 372
Query: 246 YCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMED------ 299
C+ G A D + M+ GI N TY+TLI GL R+DD L++ ME
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 300 ------------------------SKEGSKGRISPY----NSVLYGLYRENQQDEALEYL 331
K +KG I+P N+ LY L + + EA +
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKG-IAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 332 KQMEK--LFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQE 389
++ L P +V ++ + + G +++A + +M+E G P+V++ + LI+ +
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 390 ERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGS 449
+RV EA ++ M P T+NT+L+GL + G + A++L E ++ +G P +
Sbjct: 552 DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ---KGCPPNT 608
Query: 450 GHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 497
++ L LC+ A +L +M+ G +PD T+N+++ L +
Sbjct: 609 ITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 223/543 (41%), Gaps = 66/543 (12%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLV-KEDIDLARAF 67
PD + +I L AR ++ + + + P + ++LD D+D + F
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSLC 127
+ +M G D T+ IL+ LC G+ F L VM+ +G+ PN YNTLI L
Sbjct: 351 W-SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLL 409
Query: 128 KNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVV 183
+ ++ A L +ME +P T+ + I Y K + V+AL EK + G P++V
Sbjct: 410 RVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV 469
Query: 184 TITKVLELLCSVGRVMDAVEILEESGEQG----------------RLGKVKGGCRFLKEM 227
L L GR +A +I + G ++G++ + L EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 228 ERKGCLPNVD-----------------------------------TYNILISSYCETGVL 252
GC P+V TYN L++ + G +
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 253 DSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYN 312
A+++F M G N +T++TL LC + LK+L M D G + YN
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM--GCVPDVFTYN 647
Query: 313 SVLYGLYRENQQDEALEYLKQMEKL-FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEE- 370
++++GL + Q EA+ + QM+KL +P V + G +EDA + +
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Query: 371 GGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIA-STFNTVLSGLCRQGNVGT 429
P + ++ LI + E + A + + +G S ++ C+ NV
Sbjct: 708 ADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSG 767
Query: 430 ALKLVEEDMRGIG-RGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWN 488
A L E+ + +G + LP Y+ LI L E + A + +Q+ G +PD T+N
Sbjct: 768 ARTLFEKFTKDLGVQPKLP---TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 489 SLL 491
LL
Sbjct: 825 FLL 827
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 143/580 (24%), Positives = 232/580 (40%), Gaps = 97/580 (16%)
Query: 6 QSPPDESIFITVIRGLGRARMINDVVKATDLVS-RFNMTPSLKIFNSILDVLVKEDIDLA 64
S PD S V RGL + V+ N+ + + N +L+ L +
Sbjct: 77 SSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEE 136
Query: 65 RAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIH 124
A+ M ++ D TY + K L + + L M+ G N+ YN LIH
Sbjct: 137 MAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIH 196
Query: 125 SLCKNGKVGRA----RSLMSDMEEPNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVP 180
L K+ A R ++ + P+ T+S L+ K ++ + + LL++ + G P
Sbjct: 197 LLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKP 256
Query: 181 DVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDTYN 240
+V T T + +L G++ +A EI LK M+ +GC P+V TY
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEI-------------------LKRMDDEGCGPDVVTYT 297
Query: 241 ILISSYCETGVLDSALDVFNDMKI-----------------------------------D 265
+LI + C LD A +VF MK D
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 266 GISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQD 325
G + VT+ L+ LC G + L +M D +G + YN+++ GL R ++ D
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD--QGILPNLHTYNTLICGLLRVHRLD 415
Query: 326 EALEYLKQMEKL--FPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLI 383
+ALE ME L P A + I + G+ A F++M +G PN+V + +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 384 HAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG--- 440
++ + R REA ++ + G +P + T+N ++ + G + A+KL+ E M
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 441 ---IGRGSL--------------------------PGSGHYSPLIKALCEKGGFQSASML 471
I SL P Y+ L+ L + G Q A L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 472 LVQMVGKGILPDYLTWNSLLICL--SQQTTWLLLLLLNEM 509
MV KG P+ +T+N+L CL + + T L +L M
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 225/550 (40%), Gaps = 72/550 (13%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKED-IDLA-RA 66
PD + +++ + I++ +K + P + + NS+++ L K D +D A +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 67 FYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLIHSL 126
F R K M ++ TY L+ GL ++ + +L M +G PN++ +NTL L
Sbjct: 561 FMRMKEMK--LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
CKN +V A ++ M + P+ T++ +I K + A+ + + PD
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDF 677
Query: 183 VTITKVLELLCSVGRVMDAVEI------------------------LEESGEQGRLG--- 215
VT+ +L + + DA +I L E+G +
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 216 --KVKGGCR-------------------------FLKEMERKGCLPNVDTYNILISSYCE 248
G CR F K + G P + TYN+LI E
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 249 TGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRI 308
+++ A DVF +K G + TY+ L+ G+ID+ ++ + M S +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM--STHECEANT 855
Query: 309 SPYNSVLYGLYRENQQDEALEYLKQM---EKLFPRAVDRSLKILGFCVDGNVEDAKRCFD 365
+N V+ GL + D+AL+ + P A I G G + +AK+ F+
Sbjct: 856 ITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE 915
Query: 366 QMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQG 425
M++ G PN IY+ LI+ + + A L K M G P T++ ++ LC G
Sbjct: 916 GMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 426 NVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQM-VGKGILPDY 484
V L +E G P Y+ +I L + + A +L +M +GI PD
Sbjct: 976 RVDEGLHYFKELKES---GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDL 1032
Query: 485 LTWNSLLICL 494
T+NSL++ L
Sbjct: 1033 YTYNSLILNL 1042
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 164/359 (45%), Gaps = 29/359 (8%)
Query: 64 ARAFYRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPNSVIYNTLI 123
AR + K GVQ TY +L+ GL + + + +KS G P+ YN L+
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLL 827
Query: 124 HSLCKNGKVGRARSLMSDME----EPNDVTFSILICAYCKEENLVNALVLLEKSFS-FGF 178
+ K+GK+ L +M E N +T +I+I K N+ +AL L S F
Sbjct: 828 DAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF 887
Query: 179 VPDVVTITKVLELLCSVGRVMDAVEILEESGEQGRLGKVKGGCRFLKEMERKGCLPNVDT 238
P T +++ L GR+ +A ++ E G + GCR PN
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFE--------GMLDYGCR-----------PNCAI 928
Query: 239 YNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLME 298
YNILI+ + + G D+A +F M +G+ + TY L+ LC GR+D+GL + ++
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELK 988
Query: 299 DSKEGSKGRISPYNSVLYGLYRENQQDEALEYLKQMEK---LFPRAVDRSLKILGFCVDG 355
+S G + YN ++ GL + ++ +EAL +M+ + P + IL + G
Sbjct: 989 ES--GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 356 NVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTF 414
VE+A + ++++ G PNV ++ LI Y + A + + M G+ P T+
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 124/327 (37%), Gaps = 59/327 (18%)
Query: 9 PDESIFITVIRGLGRARMINDVVKATDLVSRFNMTPSLKIFNSILDVLVKE-DIDLARAF 67
P + +I GL A MI V P + +N +LD K ID
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 68 YRKKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLH-VMKSRGVKPNSVIYNTLIHSL 126
Y K+M + + T+ I++ GL V D L + +M R P + Y LI L
Sbjct: 843 Y-KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGL 901
Query: 127 CKNGKVGRARSLMSDMEE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDV 182
K+G++ A+ L M + PN ++ILI + K A L ++ G PD+
Sbjct: 902 SKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDL 961
Query: 183 VTITKVLELLCSVGRVMDAVEILEESGEQG-------------------RL--------- 214
T + +++ LC VGRV + + +E E G RL
Sbjct: 962 KTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNE 1021
Query: 215 ------------------------GKVKGGCRFLKEMERKGCLPNVDTYNILISSYCETG 250
G V+ + E++R G PNV T+N LI Y +G
Sbjct: 1022 MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSG 1081
Query: 251 VLDSALDVFNDMKIDGISWNFVTYDTL 277
+ A V+ M G S N TY+ L
Sbjct: 1082 KPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,753,441
Number of Sequences: 539616
Number of extensions: 9134445
Number of successful extensions: 33347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 21837
Number of HSP's gapped (non-prelim): 2709
length of query: 577
length of database: 191,569,459
effective HSP length: 123
effective length of query: 454
effective length of database: 125,196,691
effective search space: 56839297714
effective search space used: 56839297714
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)